From 1c7240955da5935a0b0cb37236e2589f596012bc Mon Sep 17 00:00:00 2001
From: Delaigue Olivier <olivier.delaigue@irstea.fr>
Date: Fri, 18 Jun 2021 11:16:47 +0200
Subject: [PATCH] style: add missing argument names and indent code Refs #123

---
 R/CreateRunOptions.R               | 2 +-
 R/RunModel_Lag.R                   | 4 ++--
 R/UtilsRunModel.R                  | 8 ++++----
 tests/testthat/test-RunModel_Lag.R | 8 ++++----
 4 files changed, 11 insertions(+), 11 deletions(-)

diff --git a/R/CreateRunOptions.R b/R/CreateRunOptions.R
index d43e99b7..8821935b 100644
--- a/R/CreateRunOptions.R
+++ b/R/CreateRunOptions.R
@@ -318,7 +318,7 @@ CreateRunOptions <- function(FUN_MOD, InputsModel,
   Outputs_Sim <- Outputs_Sim[!duplicated(Outputs_Sim)]
 
 
-    ##check_Outputs_Cal
+  ##check_Outputs_Cal
   if (is.null(Outputs_Cal)) {
     if ("GR" %in% ObjectClass) {
       Outputs_Cal <- c("Qsim")
diff --git a/R/RunModel_Lag.R b/R/RunModel_Lag.R
index 29712446..28c1180e 100644
--- a/R/RunModel_Lag.R
+++ b/R/RunModel_Lag.R
@@ -73,8 +73,8 @@ RunModel_Lag <- function(InputsModel, RunOptions, Param, QcontribDown) {
       seq_len(NbUpBasins),
       function(iUpBasins) {
         iWarmUp <- seq.int(
-          max(1, RunOptions$IndPeriod_WarmUp[length(RunOptions$IndPeriod_WarmUp)] - floor(PT[iUpBasins])),
-          max(1, RunOptions$IndPeriod_WarmUp[length(RunOptions$IndPeriod_WarmUp)])
+          from = max(1, RunOptions$IndPeriod_WarmUp[length(RunOptions$IndPeriod_WarmUp)] - floor(PT[iUpBasins])),
+          to   = max(1, RunOptions$IndPeriod_WarmUp[length(RunOptions$IndPeriod_WarmUp)])
         )
         ini <- InputsModel$Qupstream[iWarmUp, iUpBasins]
         if(length(ini) != floor(PT[iUpBasins] + 1)) {
diff --git a/R/UtilsRunModel.R b/R/UtilsRunModel.R
index b79809f6..096aff84 100644
--- a/R/UtilsRunModel.R
+++ b/R/UtilsRunModel.R
@@ -10,10 +10,10 @@
 #' @noRd
 #'
 .GetOutputsModelGR <- function(InputsModel,
-                                RunOptions,
-                                RESULTS,
-                                LInputSeries,
-                                CemaNeigeLayers = NULL) {
+                               RunOptions,
+                               RESULTS,
+                               LInputSeries,
+                               CemaNeigeLayers = NULL) {
 
   IndPeriod2 <- (length(RunOptions$IndPeriod_WarmUp)+1):LInputSeries
   FortranOutputs <- RunOptions$FortranOutputs$GR
diff --git a/tests/testthat/test-RunModel_Lag.R b/tests/testthat/test-RunModel_Lag.R
index d71189c1..81537b6b 100644
--- a/tests/testthat/test-RunModel_Lag.R
+++ b/tests/testthat/test-RunModel_Lag.R
@@ -180,8 +180,8 @@ test_that("1 input with lag of 0.5 time step delay out gives an output delayed o
 
 test_that("Qupstream in different units should return the same result", {
   OutputsSD_mm <- RunModel(InputsModel, RunOptions,
-                        Param = ParamSD,
-                        FUN_MOD = RunModel_GR4J)
+                           Param = ParamSD,
+                           FUN_MOD = RunModel_GR4J)
   InputsModel_m3 <- CreateInputsModel(
     FUN_MOD = RunModel_GR4J,
     DatesR = BasinObs$DatesR,
@@ -208,8 +208,8 @@ test_that("Qupstream in different units should return the same result", {
     QupstrUnit = "m3/s"
   )
   OutputsSD_m3s <- RunModel(InputsModel_m3s, RunOptions,
-                           Param = ParamSD,
-                           FUN_MOD = RunModel_GR4J)
+                            Param = ParamSD,
+                            FUN_MOD = RunModel_GR4J)
   expect_equal(OutputsSD_mm$Qsim, OutputsSD_m3s$Qsim)
 
   InputsModel_ls <- CreateInputsModel(
-- 
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