\title{Data sample: time series of observations of a fictional catchment (L0123001, L0123002 or L0123003)}
\format{Data frame named 'BasinObs' containing
\itemize{
\item one POSIXct vector: time series dates in the POSIXct format
\item five numeric vectors: time series of catchment average precipitation [mm/time step], catchment average air temperature [°C], catchment average potential evapotranspiration [mm/time step], outlet discharge [l/s], outlet discharge [mm/time step]
}}
\description{
R-object containing the times series of precipitation, temperature, potential evapotranspiration and discharges. \cr
Times series for L0123001 or L0123002 are at the daily time step for use with daily models such as GR4J, GR5J, GR6J, CemaNeigeGR4J, CemaNeigeGR5J and CemaNeigeGR6J.
Times series for L0123003 are at the hourly time step for use with hourly models such as GR4H.
\item{CalibOptions}{[object of class \emph{CalibOptions}] see \code{\link{CreateCalibOptions}} for details}
\item{FUN_MOD}{[function] hydrological model function (e.g. RunModel_GR4J, RunModel_CemaNeigeGR4J)}
\item{FUN_MOD}{[function] hydrological model function (e.g. \code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}})}
\item{FUN_CRIT}{[function] error criterion function (e.g. ErrorCrit_RMSE, ErrorCrit_NSE)}
\item{FUN_CRIT}{[function] error criterion function (e.g. \code{\link{ErrorCrit_RMSE}}, \code{\link{ErrorCrit_NSE}})}
\item{FUN_CALIB}{(optional) [function] calibration algorithm function (e.g. Calibration_Michel), default=Calibration_Michel}
\item{FUN_CALIB}{(optional) [function] calibration algorithm function (e.g. \code{\link{Calibration_Michel}}), \code{default = Calibration_Michel}}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the FUN_MOD used is native in the package FUN_TRANSFO is automatically defined}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the \code{FUN_MOD} used is native in the package \code{FUN_TRANSFO} is automatically defined}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default=TRUE}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default = \code{TRUE}}
}
\value{
[list] see \code{\link{Calibration_Michel}}
}
\description{
Calibration algorithm which optimises the error criterion selected as objective function using the provided functions. \cr
Calibration algorithm which optimises the error criterion selected as objective function using the provided functions.
\item{CalibOptions}{[object of class \emph{CalibOptions}] see \code{\link{CreateCalibOptions}} for details}
\item{FUN_MOD}{[function] hydrological model function (e.g. RunModel_GR4J, RunModel_CemaNeigeGR4J)}
\item{FUN_MOD}{[function] hydrological model function (e.g. \code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}})}
\item{FUN_CRIT}{[function] error criterion function (e.g. ErrorCrit_RMSE, ErrorCrit_NSE)}
\item{FUN_CRIT}{[function] error criterion function (e.g. \code{\link{ErrorCrit_RMSE}}, \code{\link{ErrorCrit_NSE}})}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the FUN_MOD used is native in the package FUN_TRANSFO is automatically defined}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the \code{FUN_MOD} used is native in the package \code{FUN_TRANSFO} is automatically defined}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default=TRUE}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default = \code{TRUE}}
}
\value{
[list] list containing the function outputs organised as follows:
\item{FUN_MOD}{[function] hydrological model function (e.g. RunModel_GR4J, RunModel_CemaNeigeGR4J)}
\item{FUN_MOD}{[function] hydrological model function (e.g. \code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}})}
\item{FUN_CALIB}{(optional) [function] calibration algorithm function (e.g. Calibration_Michel), default=Calibration_Michel}
\item{FUN_CALIB}{(optional) [function] calibration algorithm function (e.g. Calibration_Michel), default = \code{Calibration_Michel}}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the FUN_MOD used is native in the package, FUN_TRANSFO is automatically defined}
\item{FUN_TRANSFO}{(optional) [function] model parameters transformation function, if the \code{FUN_MOD} used is native in the package, \code{FUN_TRANSFO} is automatically defined}
\item{FixedParam}{(optional) [numeric] vector giving the values set for the non-optimised parameter values (NParam columns, 1 line)
Creation of the \code{IniStates} object possibly required by the \code{\link{CreateRunOptions}} functions
Creation of the \emph{IniStates} object possibly required by the \code{\link{CreateRunOptions}} function.
}
\details{
20 numeric values are required for UH1 and 40 numeric values are required for UH2 if GR4J, GR5J or GR6J are used (respectivly 20*24 and 40*24 for the daily model GR4H). \cr
GCemaNeigeLayers and eTGCemaNeigeLayers require each numeric values as many as given in \code{\link{CreateInputsModel}} with the NLayersargument. eTGCemaNeigeLayers values can be negatives.\cr
\code{GCemaNeigeLayers} and \code{eTGCemaNeigeLayers} require each numeric values as many as given in \code{\link{CreateInputsModel}} with the \code{NLayersargument}. \code{eTGCemaNeigeLayers} values can be negatives.\cr
The structure of the object of class \code{IniStates} returned is always exactly the same for all models (except for the unit hydrographs levels that contain more values with GR4H), even if some states do nt exist (e.g. \emph{$UH$UH1} for GR2M). \cr
If CemaNeige is not used, \emph{$CemaNeigeLayers$G} and \emph{$CemaNeigeLayers$eTG} are set to \code{NA}. \cr
\item{NLayers}{(optional) [numeric] integer giving the number of elevation layers requested [-], required to create CemaNeige module inputs, default=5}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default= \code{TRUE}}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default= \code{TRUE}}
}
\value{
[list] object of class \emph{InputsModel} containing the data required to evaluate the model outputs; it can include the following:
\emph{$LayerFracSolidPrecip} \tab [list] list of time series of solid precipitation fraction (layer average) [-], \cr\tab defined if \code{FUN_MOD} includes CemaNeige \cr \cr
}
}
\description{
Creation of the InputsModel object required to the RunModel functions.
Creation of the \emph{InputsModel} object required to the \code{RunModel*} functions.
}
\details{
Users wanting to use \code{FUN_MOD} functions that are not included in
the package must create their own InputsModel object accordingly.
\item{RunSnowModule}{(deprecated) [boolean] option indicating whether CemaNeige should be activated. Please adapt \code{FUN_MOD} instead}
\item{MeanAnSolidPrecip}{(optional) [numeric] vector giving the annual mean of average solid precipitation for each layer (computed from InputsModel if not defined) [mm/y]}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, \code{default = TRUE}}
\item{verbose}{(optional) [boolean] boolean indicating if the function is run in verbose mode or not, default = \code{TRUE}}
}
\value{
[list] object of class \emph{RunOptions} containing the data required to evaluate the model outputs; it can include the following:
\emph{MeanAnSolidPrecip} \tab [numeric] vector giving the annual mean of average solid precipitation for each layer [mm/y] \cr
}
}
\description{
Creation of the RunOptions object required to the RunModel functions.
Creation of the RunOptions object required to the \code{RunModel*} functions.
}
\details{
Users wanting to use \code{FUN_MOD} functions that are not included in
the package must create their own \code{RunOptions} object accordingly.
...
...
@@ -84,6 +98,8 @@ However, it is also possible to perform a long-term initialisation if other indi
- remark 3: in addition to \code{IniStates}, \code{IniResLevels} allows to set the filling rate of the production and routing stores for the GR models. For instance for GR4J and , GR5J: \code{IniResLevels <- c(0.3, 0.5)} should be used to obtain initial fillings of 30\% and 50\% for the production and routing stores, respectively. For GR6J, \code{IniResLevels <- c(0.3, 0.5, 0)} shold be use to obtain initial fillings of 30\% and 50\% for the production, routing stores and 0 mm for the exponential store, respectively. \code{IniResLevels} is optional and can only be used if \code{IniStates} is also defined (the state values corresponding to these two other stores in \code{IniStates} are not used in such case). \cr \cr
