From b0ad6d6f10eaf65497f00f43e5d2e43427bcfec9 Mon Sep 17 00:00:00 2001
From: Dorchies David <david.dorchies@inrae.fr>
Date: Sat, 17 Apr 2021 01:16:17 +0200
Subject: [PATCH] fix(ci): libPaths issue with R v4.0.5
---
.gitlab-ci.yml | 44 ++------------------------------------------
1 file changed, 2 insertions(+), 42 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index dd5d2692..5019ac13 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1,31 +1,14 @@
stages:
- - build
- check
- regression
- revdepcheck
-variables:
- R_LIBS_USER: "$CI_PROJECT_DIR/ci/lib"
-
default:
before_script:
- echo "setwd(\"$(pwd)\")" > .Rprofile
+ - echo ".libPaths <- c(Sys.getenv(\"R_LIBS_USER\"), .libPaths())" >> .Rprofile
- PATH=~/R/sources/R-${R_VERSION}/bin:$PATH
- - rename "s/${R_VERSION}.airGR/airGR/" *.tar.gz
-
-.build:
- stage: build
- script:
- - cd ..
- - echo "setwd(\"$(pwd)\")" > .Rprofile
- - R -e 'Sys.getenv()'
- - R -e '.libPaths()'
- - R -e 'utils::install.packages("usethis", repo = "https://cloud.r-project.org/")'
- - R -e 'remotes::install_deps(pkgdir = "airgr", dep = T)'
- - R CMD build airgr
- artifacts:
- untracked: true
- expire_in: 1 week
+ - R -e 'remotes::install_deps(dep = T)'
.regression:
stage: regression
@@ -50,11 +33,6 @@ default:
NOT_CRAN: "false"
extends: .check
-build_patched:
- variables:
- R_VERSION: "patched"
- extends: .build
-
regression_patched:
variables:
R_VERSION: "patched"
@@ -86,15 +64,6 @@ check_as_cran_patched:
R_VERSION: "patched"
extends: .check_as_cran
-build_devel:
- only:
- refs:
- - tags
- - schedules
- variables:
- R_VERSION: "devel"
- extends: .build
-
check_not_cran_devel:
only:
refs:
@@ -113,15 +82,6 @@ check_as_cran_devel:
R_VERSION: "devel"
extends: .check_as_cran
-build_oldrel:
- only:
- refs:
- - tags
- - schedules
- variables:
- R_VERSION: "oldrel"
- extends: .build
-
check_not_cran_oldrel:
only:
refs:
--
GitLab