RIO_obs_NEA.xml 6.42 KB
Newer Older
patrick.lambert's avatar
patrick.lambert committed
1
2
<hashtable>
	<entry>
3
4
5
6
7
		<!--
		
		<java-class>fr.cemagref.simaqualife.kernel.AquaticWorld</java-class>-->
		<java-class>environment.RIOBasinNetworkWithContinent</java-class>
	
patrick.lambert's avatar
patrick.lambert committed
8
9
10
11
12
		<fr.cemagref.observation.kernel.ObservablesHandler>
			<observers>
				<environment.RIOBasinNetworkObserverWithContinent>
					<title>North East America</title>
					<threshold>1000000</threshold>
patrick.lambert's avatar
patrick.lambert committed
13
					<colorScaleEnum>RedsScale</colorScaleEnum>
patrick.lambert's avatar
patrick.lambert committed
14
				</environment.RIOBasinNetworkObserverWithContinent>
patrick.lambert's avatar
patrick.lambert committed
15

patrick.lambert's avatar
patrick.lambert committed
16
17
18
19
20
21
22
23
				<environment.RIOBasinNetworkObserverPresence>
					<title>Shad presence in North East America</title>
					<presenceFileName>data/input/northeastamerica/nea_presence.csv</presenceFileName>
					<period>obs_1900_1950</period>
				</environment.RIOBasinNetworkObserverPresence>
			</observers>
		</fr.cemagref.observation.kernel.ObservablesHandler>
	</entry>
patrick.lambert's avatar
patrick.lambert committed
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
	<entry>
		<java-class>species.DiadromousFishGroup</java-class>
		<fr.cemagref.observation.kernel.ObservablesHandler>
			<observers>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Number of colonized
						basins
					</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>number of basins</yAxisLabel>
					<variableName>getNbColonizedBasins</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Total Abundance</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>number of fishes</yAxisLabel>
					<variableName>getFishEffective</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Abundance of spawners</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>number
						of fishes
					</yAxisLabel>
					<variableName>getSpawnerEffective</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Abundance of male spawners</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>number of fishes</yAxisLabel>
					<variableName>getMaleSpawnerEffective</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Abundance of female spawners</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>number
						of fishes
					</yAxisLabel>
					<variableName>getFemaleSpawnerEffective</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<miscellaneous.TemporalRangeSerieChart>
					<title>Range distribution</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>latitude</yAxisLabel>
					<variableName>getRangeDistributionWithLat</variableName>
				</miscellaneous.TemporalRangeSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Mean age at first reproduction for female</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>age (year)</yAxisLabel>
					<variableName>getMeanAgeOfFirstReprodutionForFemale</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Mean age at first reproduction
						for male
					</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>age (year)</yAxisLabel>
					<variableName>getMeanAgeOfFirstReprodutionForMale</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Statistic for male spawners age</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel></yAxisLabel>
					<variableName>computeMaleSpawnerForFirstTimeSummaryStatistic</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Statistic for female
						spawners age
					</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel></yAxisLabel>
					<variableName>computeFemaleSpawnerForFirstTimeSummaryStatistic</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Mean length at first reproduction for female</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>length (cm)</yAxisLabel>
					<variableName>getMeanLengthOfFirstReprodutionForFemale</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
				<fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
					<graphType>LINE</graphType>
					<title>Mean length at first
						reproduction for male
					</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>length (cm)</yAxisLabel>
					<variableName>getMeanLengthOfFirstReprodutionForMale</variableName>
				</fr.cemagref.observation.observers.jfreechart.TemporalSerieChart>
			</observers>
		</fr.cemagref.observation.kernel.ObservablesHandler>
	</entry>
	<entry>
		<java-class>environment.RiverBasin</java-class>
		<fr.cemagref.observation.kernel.ObservablesHandler>
			<observers>
				<miscellaneous.TemporalSerieChartForBasin>
					<graphType>LINE</graphType>
					<title>Number of juveniles</title>
					<xAxisLabel>Time
						(season)
					</xAxisLabel>
					<yAxisLabel>number of juveniles</yAxisLabel>
					<variableName>getJuvenileNumber</variableName>
				</miscellaneous.TemporalSerieChartForBasin>
				<miscellaneous.TemporalSerieChartForBasin>
					<graphType>LINE</graphType>
					<title>% Autochtone</title>
					<xAxisLabel>Time (season)</xAxisLabel>
					<yAxisLabel>% Autochtone</yAxisLabel>
					<variableName>getLastPercentageOfAutochtone</variableName>
				</miscellaneous.TemporalSerieChartForBasin>
			</observers>
		</fr.cemagref.observation.kernel.ObservablesHandler>
	</entry>

patrick.lambert's avatar
patrick.lambert committed
150
</hashtable>