fishTryRealBV_PL.xml 6.29 KB
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<list>
	<species.DiadromousFishGroup>
		<name>species A</name>
		<color>
			<red>255</red>
			<green>0</green>
			<blue>0</blue>
			<alpha>255</alpha>
		</color>
		  <centileForRange>0.95</centileForRange>
		<linfVonBert>60.0</linfVonBert>
		<dMaxDisp>0.0</dMaxDisp>
		<lFirstMaturity>40.0</lFirstMaturity>
		<fileNameInputForInitialObservation>data/input/reality/Obs1900.csv</fileNameInputForInitialObservation>
		<parameterSetfileName>data/input/reality/parameterSet10.csv</parameterSetfileName>
		<parameterSetLine>10</parameterSetLine>
		<yearOfTheUpdate>2000</yearOfTheUpdate>
		<basinsToUpdateFile></basinsToUpdateFile>
		<outputPath>data/output/</outputPath>
		
		<processes>
			<processesAtBegin>
				<species.PopulateBasinNetwork>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<nbSIPerBasin>200</nbSIPerBasin>
					<nbFishPerSI>2500</nbFishPerSI>
					<initialLength>2.0</initialLength>
				</species.PopulateBasinNetwork>
			</processesAtBegin>

			<processesEachStep>
				<environment.InformTime>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					  <consoleDisplay>true</consoleDisplay>
				</environment.InformTime>
				<species.PlopProcess>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<temporisation>0</temporisation>
				</species.PlopProcess>

				<species.Age>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
				</species.Age>

				<species.Grow>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<tempMinGrow>3.0</tempMinGrow>
					<tempMaxGrow>26.0</tempMaxGrow>
					<tempOptGrow>17.0</tempOptGrow>
					<sigmaDeltaLVonBert>0.2</sigmaDeltaLVonBert>
				</species.Grow>

				<species.DisperseAndMigrateToRiverWithMultiNomDistriAndDeathBasin>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<alpha0Rep>-2.9</alpha0Rep>
					<alpha1Rep>19.7</alpha1Rep>
					<alpha3Rep>0.0</alpha3Rep>
					<meanBvSurface>17351</meanBvSurface>
					<standardDeviationBvSurface>35594</standardDeviationBvSurface>
					<meanInterDistance>300.0</meanInterDistance>
					<standardDeviationInterDistance>978.0</standardDeviationInterDistance>
					<pHomingForReachEquil>0.75</pHomingForReachEquil>
					<pHomingAfterEquil>0.75</pHomingAfterEquil>
					<NbYearForInstallPop>0</NbYearForInstallPop>
					<riverMigrationSeason>SPRING</riverMigrationSeason>
					<alpha2Rep>0.0</alpha2Rep>
					<meanSpawnersLengthAtRepro>45.0</meanSpawnersLengthAtRepro>
					<standardDeviationOfSpawnersLengthAtRepro>2.0
					</standardDeviationOfSpawnersLengthAtRepro>
					<weightOfDeathBasin>0.4</weightOfDeathBasin>
					<killStrayers>true</killStrayers>
					<yearOfTheKillings>3000</yearOfTheKillings>
				</species.DisperseAndMigrateToRiverWithMultiNomDistriAndDeathBasin>

				<species.Survive>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<tempMinMortGenInRiv>10.0</tempMinMortGenInRiv>
					<tempMaxMortGenInRiv>23.0</tempMaxMortGenInRiv>
					<tempOptMortGenInRiv>20.0</tempOptMortGenInRiv>
					<survivalProbOptGenInRiv>1.0</survivalProbOptGenInRiv>
					<mortalityRateInRiver>0.4</mortalityRateInRiver>
					<mortalityRateInSea>0.4</mortalityRateInSea>
					<mortalityRateInOffshore>0.4</mortalityRateInOffshore>
				</species.Survive>

				<species.ReproduceAndSurviveAfterReproductionWithDiagnose>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<reproductionSeason>SPRING</reproductionSeason>
					<tempMaxRep>26.0</tempMaxRep>
					<tempOptRep>20.0</tempOptRep>
					<eta>2.4</eta>
					<ratioS95__S50>1.9</ratioS95__S50>
					<a>135000.0</a>
					<delta__t>0.33</delta__t>
					<survOptRep>0.0017</survOptRep>
					<lambda>4.1E-4</lambda>
					<initialLength>2.0</initialLength>
					<sigmaRecruitment>0.2</sigmaRecruitment>
					<survivalRateAfterReproduction>0.1</survivalRateAfterReproduction>
					<maxNumberOfSuperIndividualPerReproduction>50.0
					</maxNumberOfSuperIndividualPerReproduction>
				</species.ReproduceAndSurviveAfterReproductionWithDiagnose>
				
				<species.MigrateToSea>
					<seaMigrationSeason>SUMMER</seaMigrationSeason>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
				</species.MigrateToSea>

				<environment.updateTemperatureInRealBasin>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<offshoreTemperature>12.0</offshoreTemperature>
				</environment.updateTemperatureInRealBasin>

				<environment.UpdateAccesibleSurface>
				</environment.UpdateAccesibleSurface>

				<species.ExportSpeciesRange>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<fileNameOutput>range</fileNameOutput>
				</species.ExportSpeciesRange>

				<species.IdentifyPopulation>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<consoleDisplay>false</consoleDisplay>
					<years>
						<long>2000</long>
						<long>2100</long>
					</years>
					<fluxesSeason>SPRING</fluxesSeason>
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					<fileNameOutput>JeuParam100_20100RCP85_A_essai</fileNameOutput>
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				</species.IdentifyPopulation>
				
				<species.ExportRecruitment>
  					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
  					<fileNameOutput>recruit</fileNameOutput>
 					 <reproductionSeason>SPRING</reproductionSeason>
				</species.ExportRecruitment>
				
				<species.ExportMeanRecruitment>
  					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
  					<fileNameOutput>meanRecruit</fileNameOutput>
 					 <reproductionSeason>SPRING</reproductionSeason>
				</species.ExportMeanRecruitment>
				
				<species.ExportPopulationStatus>
  					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
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  					<fileNameMortality>mortality</fileNameMortality>
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  					<fileNameMortalityCrash>mortalityCrash</fileNameMortalityCrash>
  					<fileNameStockTrap>stockTrap</fileNameStockTrap>
  					<fileNamePopulationStatus>populationStatus</fileNamePopulationStatus>
  					<reproductionSeason>SPRING</reproductionSeason>
				</species.ExportPopulationStatus>

			</processesEachStep>

			<processesAtEnd>
				<species.TypeTrajectoryCV>
					<synchronisationMode>ASYNCHRONOUS</synchronisationMode>
					<fileNameOutput>summary</fileNameOutput>
				</species.TypeTrajectoryCV>

			</processesAtEnd>
		</processes>
		<useCemetery>false</useCemetery>
	</species.DiadromousFishGroup>

</list>