From 17b53021c4607db74458c652cf00dad4943e20b3 Mon Sep 17 00:00:00 2001
From: "patrick.lambert" <patrick.mh.lambert@inrae.fr>
Date: Thu, 18 Feb 2021 17:25:05 +0100
Subject: [PATCH] restructuration of exploration folder
---
.../NEAgrowth.R | 0
.../NEAgrowth.Rmd | 0
.../NEAgrowth.docx | Bin
.../Stich_Table 9.csv | 0
.../dispersionCalibration.Rmd | 0
.../dispersionCalibration.docx | Bin
.../integralRougierKernel.wxmx | Bin
.../tryFromRougier.R | 0
.../ABC_seq_2param_3stats_NewAfterSA.yaml | 10 ----------
exploration/R_AS_GR3D/R_AS_GR3D.Rproj | 13 -------------
10 files changed, 23 deletions(-)
rename exploration/{scriptR => NEA_calibration_offline}/NEAgrowth.R (100%)
rename exploration/{scriptR => NEA_calibration_offline}/NEAgrowth.Rmd (100%)
rename exploration/{scriptR => NEA_calibration_offline}/NEAgrowth.docx (100%)
rename exploration/{scriptR => NEA_calibration_offline}/Stich_Table 9.csv (100%)
rename exploration/{scriptR => NEA_calibration_offline}/dispersionCalibration.Rmd (100%)
rename exploration/{scriptR => NEA_calibration_offline}/dispersionCalibration.docx (100%)
rename exploration/{scriptR => NEA_calibration_offline}/integralRougierKernel.wxmx (100%)
rename exploration/{R_AS_GR3D => NEA_sensitivity_analysis}/tryFromRougier.R (100%)
delete mode 100644 exploration/R_AS_GR3D/ABC_seq_2param_3stats_NewAfterSA.yaml
delete mode 100644 exploration/R_AS_GR3D/R_AS_GR3D.Rproj
diff --git a/exploration/scriptR/NEAgrowth.R b/exploration/NEA_calibration_offline/NEAgrowth.R
similarity index 100%
rename from exploration/scriptR/NEAgrowth.R
rename to exploration/NEA_calibration_offline/NEAgrowth.R
diff --git a/exploration/scriptR/NEAgrowth.Rmd b/exploration/NEA_calibration_offline/NEAgrowth.Rmd
similarity index 100%
rename from exploration/scriptR/NEAgrowth.Rmd
rename to exploration/NEA_calibration_offline/NEAgrowth.Rmd
diff --git a/exploration/scriptR/NEAgrowth.docx b/exploration/NEA_calibration_offline/NEAgrowth.docx
similarity index 100%
rename from exploration/scriptR/NEAgrowth.docx
rename to exploration/NEA_calibration_offline/NEAgrowth.docx
diff --git a/exploration/scriptR/Stich_Table 9.csv b/exploration/NEA_calibration_offline/Stich_Table 9.csv
similarity index 100%
rename from exploration/scriptR/Stich_Table 9.csv
rename to exploration/NEA_calibration_offline/Stich_Table 9.csv
diff --git a/exploration/scriptR/dispersionCalibration.Rmd b/exploration/NEA_calibration_offline/dispersionCalibration.Rmd
similarity index 100%
rename from exploration/scriptR/dispersionCalibration.Rmd
rename to exploration/NEA_calibration_offline/dispersionCalibration.Rmd
diff --git a/exploration/scriptR/dispersionCalibration.docx b/exploration/NEA_calibration_offline/dispersionCalibration.docx
similarity index 100%
rename from exploration/scriptR/dispersionCalibration.docx
rename to exploration/NEA_calibration_offline/dispersionCalibration.docx
diff --git a/exploration/scriptR/integralRougierKernel.wxmx b/exploration/NEA_calibration_offline/integralRougierKernel.wxmx
similarity index 100%
rename from exploration/scriptR/integralRougierKernel.wxmx
rename to exploration/NEA_calibration_offline/integralRougierKernel.wxmx
diff --git a/exploration/R_AS_GR3D/tryFromRougier.R b/exploration/NEA_sensitivity_analysis/tryFromRougier.R
similarity index 100%
rename from exploration/R_AS_GR3D/tryFromRougier.R
rename to exploration/NEA_sensitivity_analysis/tryFromRougier.R
diff --git a/exploration/R_AS_GR3D/ABC_seq_2param_3stats_NewAfterSA.yaml b/exploration/R_AS_GR3D/ABC_seq_2param_3stats_NewAfterSA.yaml
deleted file mode 100644
index e8aa411..0000000
--- a/exploration/R_AS_GR3D/ABC_seq_2param_3stats_NewAfterSA.yaml
+++ /dev/null
@@ -1,10 +0,0 @@
-nbSimul: 4000
-nbCluster: 13
-p_acc_min: 0.01
-alpha: 0.25
-parameters:
-- javapath: processes.processesEachStep.2.kOpt
- prior: [ unif, 0.1, 0.8 ]
-- javapath: processes.processesEachStep.5.tempMinRep
- prior: [ unif, 9.0, 12.0 ]
-
diff --git a/exploration/R_AS_GR3D/R_AS_GR3D.Rproj b/exploration/R_AS_GR3D/R_AS_GR3D.Rproj
deleted file mode 100644
index 8e3c2eb..0000000
--- a/exploration/R_AS_GR3D/R_AS_GR3D.Rproj
+++ /dev/null
@@ -1,13 +0,0 @@
-Version: 1.0
-
-RestoreWorkspace: Default
-SaveWorkspace: Default
-AlwaysSaveHistory: Default
-
-EnableCodeIndexing: Yes
-UseSpacesForTab: Yes
-NumSpacesForTab: 2
-Encoding: UTF-8
-
-RnwWeave: Sweave
-LaTeX: pdfLaTeX
--
GitLab