From ecec42c8ca13237037ed1986c9fdde392a7ee341 Mon Sep 17 00:00:00 2001 From: "patrick.lambert" <patrick.mh.lambert@inrae.fr> Date: Sat, 8 Aug 2020 19:48:57 +0200 Subject: [PATCH] observer for RIO network --- data/input/northeastamerica/RIO_obs_NEA.xml | 55 +++++++++++++++++++++ 1 file changed, 55 insertions(+) create mode 100644 data/input/northeastamerica/RIO_obs_NEA.xml diff --git a/data/input/northeastamerica/RIO_obs_NEA.xml b/data/input/northeastamerica/RIO_obs_NEA.xml new file mode 100644 index 0000000..f3ffb8d --- /dev/null +++ b/data/input/northeastamerica/RIO_obs_NEA.xml @@ -0,0 +1,55 @@ +<hashtable> + <entry> + <java-class>fr.cemagref.simaqualife.kernel.AquaticWorld</java-class> + <fr.cemagref.observation.kernel.ObservablesHandler> + <observers> + <environment.RIOBasinNetworkObserverWithContinent> + <title>North East America</title> + <threshold>1000000</threshold> + </environment.RIOBasinNetworkObserverWithContinent> + + <environment.RIOBasinNetworkObserverPresence> + <title>Shad presence in North East America</title> + <presenceFileName>data/input/northeastamerica/nea_presence.csv</presenceFileName> + <period>obs_1900_1950</period> + </environment.RIOBasinNetworkObserverPresence> + </observers> + </fr.cemagref.observation.kernel.ObservablesHandler> + </entry> + <!-- <entry> <java-class>species.DiadromousFishGroup</java-class> <fr.cemagref.observation.kernel.ObservablesHandler> <observers> + <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <graphType>LINE</graphType> <title>Number of colonized + basins</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>number of basins</yAxisLabel> <variableName>getNbColonizedBasins</variableName> + </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Total Abundance</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>number of fishes</yAxisLabel> + <variableName>getFishEffective</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Abundance of spawners</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>number + of fishes</yAxisLabel> <variableName>getSpawnerEffective</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <graphType>LINE</graphType> <title>Abundance of male spawners</title> + <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>number of fishes</yAxisLabel> <variableName>getMaleSpawnerEffective</variableName> + </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Abundance of female spawners</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>number + of fishes</yAxisLabel> <variableName>getFemaleSpawnerEffective</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <miscellaneous.TemporalRangeSerieChart> <title>Range distribution</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>latitude</yAxisLabel> + <variableName>getRangeDistributionWithLat</variableName> </miscellaneous.TemporalRangeSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Mean age at first reproduction for female</title> <xAxisLabel>Time (season)</xAxisLabel> + <yAxisLabel>age (year)</yAxisLabel> <variableName>getMeanAgeOfFirstReprodutionForFemale</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <graphType>LINE</graphType> <title>Mean age at first reproduction + for male</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>age (year)</yAxisLabel> <variableName>getMeanAgeOfFirstReprodutionForMale</variableName> + </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Statistic for male spawners age</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel></yAxisLabel> + <variableName>computeMaleSpawnerForFirstTimeSummaryStatistic</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <graphType>LINE</graphType> <title>Statistic for female + spawners age</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel></yAxisLabel> <variableName>computeFemaleSpawnerForFirstTimeSummaryStatistic</variableName> + </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <graphType>LINE</graphType> <title>Mean length at first reproduction for female</title> <xAxisLabel>Time (season)</xAxisLabel> + <yAxisLabel>length (cm)</yAxisLabel> <variableName>getMeanLengthOfFirstReprodutionForFemale</variableName> </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> + <fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> <graphType>LINE</graphType> <title>Mean length at first + reproduction for male</title> <xAxisLabel>Time (season)</xAxisLabel> <yAxisLabel>length (cm)</yAxisLabel> <variableName>getMeanLengthOfFirstReprodutionForMale</variableName> + </fr.cemagref.observation.observers.jfreechart.TemporalSerieChart> </observers> </fr.cemagref.observation.kernel.ObservablesHandler> + </entry> <entry> <java-class>environment.RiverBasin</java-class> <fr.cemagref.observation.kernel.ObservablesHandler> <observers> + <miscellaneous.TemporalSerieChartForBasin> <graphType>LINE</graphType> <title>Number of juveniles</title> <xAxisLabel>Time + (season)</xAxisLabel> <yAxisLabel>number of juveniles</yAxisLabel> <variableName>getJuvenileNumber</variableName> </miscellaneous.TemporalSerieChartForBasin> + <miscellaneous.TemporalSerieChartForBasin> <graphType>LINE</graphType> <title>% Autochtone</title> <xAxisLabel>Time (season)</xAxisLabel> + <yAxisLabel>% Autochtone</yAxisLabel> <variableName>getLastPercentageOfAutochtone</variableName> </miscellaneous.TemporalSerieChartForBasin> + </observers> </fr.cemagref.observation.kernel.ObservablesHandler> </entry> --> +</hashtable> \ No newline at end of file -- GitLab