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diff --git a/Data/Baseline/OTB/Files/TvDescriptorsSVMModelCreation.svm b/Data/Baseline/OTB/Files/TvDescriptorsSVMModelCreation.svm
deleted file mode 100644
index b557bcfbe569174f8d48c93d4d7926275540d020..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/TvDescriptorsSVMModelCreation.svm
+++ /dev/null
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221.5, 148] [ 221.5, 149] [ 221.5, 150] [ 221.5, 151] [ 221.5, 152] [ 221.5, 153] [ 221.5, 154] [ 221.5, 155] [ 221.5, 156] [ 221.5, 157] [ 221.5, 158] [ 221.5, 159] [ 221.5, 160] [ 221.5, 161] [ 221.5, 162] [ 221.5, 163] [ 221.5, 164] [ 221.5, 165] [ 221.5, 166] [ 221.5, 167] [ 221.5, 168] [ 221.5, 169] [ 221.5, 170] [ 221.5, 171] [ 221.5, 172] [ 221.5, 173] [ 221.5, 174] [ 221.5, 175] [ 221.5, 176] [ 221.5, 177] [ 221.5, 178] [ 221.5, 179] [ 221.5, 180] [ 221.5, 181] [ 221.5, 182] [ 221.5, 183] [ 221.5, 184] [ 221.5, 185] [ 221.5, 186] [ 221.5, 187] [ 221.5, 188] [ 221.5, 189] [ 221.5, 190] [ 221.5, 191] [ 221.5, 192] [ 221.5, 193] [ 221.5, 194] [ 221.5, 195] [ 221.5, 196] [ 221.5, 197] [ 221.5, 198] [ 221.5, 199] [ 221.5, 200] [ 221.5, 201] [ 221.5, 202.5] [ 220, 202.5] [ 219, 202.5] [ 218, 202.5] [ 217, 202.5] [ 216, 202.5] [ 215, 202.5] [ 214, 202.5] [ 213, 202.5] [ 212, 202.5] [ 211, 202.5] [ 210, 202.5] [ 209, 202.5] [ 208, 202.5] [ 207, 202.5] [ 206, 202.5] [ 205, 202.5] [ 204, 202.5] [ 203, 202.5] [ 202, 202.5] [ 201, 202.5] [ 200, 202.5] [ 199, 202.5] [ 198, 202.5] [ 197, 202.5] [ 196, 202.5] [ 195, 202.5] [ 194, 202.5] [ 193, 202.5] [ 192, 202.5] [ 191, 202.5] [ 190, 202.5] [ 189, 202.5] [ 187.5, 202.5] [ 187.5, 201] [ 187.5, 200] [ 187.5, 199] [ 187.5, 198] [ 187.5, 197] [ 187.5, 196] [ 187.5, 195] [ 187.5, 194] [ 187.5, 193] [ 187.5, 192] [ 187.5, 191] [ 187.5, 190] [ 187.5, 189] [ 187.5, 188] [ 187.5, 187] [ 187.5, 186] [ 187.5, 185] [ 187.5, 184] [ 187.5, 183] [ 187.5, 182] [ 187.5, 181] [ 187.5, 180] [ 187.5, 179] [ 187.5, 178] [ 187.5, 177] [ 187.5, 176] [ 187.5, 175] [ 187.5, 174] [ 187.5, 173] [ 187.5, 172] [ 187.5, 171] [ 187.5, 170] [ 187.5, 169] [ 187.5, 168] [ 187.5, 167] [ 187.5, 166] [ 187.5, 165] [ 187.5, 164] [ 187.5, 163] [ 187.5, 162] [ 187.5, 161] [ 187.5, 160] [ 187.5, 159] [ 187.5, 158] [ 187.5, 157] [ 187.5, 156] [ 187.5, 155] [ 187.5, 154] [ 187.5, 153] [ 187.5, 152] [ 187.5, 151] [ 187.5, 150] [ 187.5, 149] [ 187.5, 148] [ 187.5, 147] [ 187.5, 146] [ 187.5, 145] [ 187.5, 144] [ 187.5, 143] [ 187.5, 142] [ 187.5, 141] [ 187.5, 140] [ 187.5, 139] [ 187.5, 138] [ 187.5, 137] [ 187.5, 136] [ 187.5, 135] [ 187.5, 134] [ 187.5, 133] [ 187.5, 132] [ 187.5, 131] [ 187.5, 130] [ 187.5, 129] [ 187.5, 128] [ 187.5, 127] [ 187.5, 126] [ 187.5, 125] [ 187.5, 124] [ 187.5, 123] [ 187.5, 122] [ 187.5, 121] [ 187.5, 120] [ 187.5, 119] [ 187.5, 118] [ 187.5, 117] [ 187.5, 116] [ 187.5, 115] [ 187.5, 114] [ 187.5, 113] [ 187.5, 112] [ 187.5, 111] [ 187.5, 110] [ 187.5, 109] [ 187.5, 108] [ 187.5, 107] [ 187.5, 106] [ 187.5, 105] [ 187.5, 104] [ 187.5, 103] [ 187.5, 102] [ 187.5, 101] [ 187.5, 100] [ 187.5, 99] [ 187.5, 98] [ 187.5, 97] [ 187.5, 96] [ 187.5, 95] [ 187.5, 94] [ 187.5, 93] [ 187.5, 92] [ 187.5, 91] [ 187.5, 90] [ 187.5, 89] [ 187.5, 88] [ 187.5, 87] [ 187.5, 86] [ 187.5, 85] [ 187.5, 84] [ 187.5, 83] [ 187.5, 82] [ 187.5, 81] [ 187.5, 80] [ 187.5, 79] [ 187.5, 78] [ 187.5, 77] [ 187.5, 76] [ 187.5, 75] [ 187.5, 74] [ 187.5, 73] [ 187.5, 72] [ 187.5, 71] [ 187.5, 70] [ 187.5, 69] [ 187.5, 68] [ 187.5, 67] [ 187.5, 66] [ 187.5, 65] [ 187.5, 64] [ 187.5, 63] [ 187.5, 62] [ 187.5, 61] [ 187.5, 60] [ 187.5, 59] [ 187.5, 58] [ 187.5, 57] [ 187.5, 56] [ 187.5, 55] [ 187.5, 54] [ 187.5, 53] [ 187.5, 52] [ 187.5, 51] [ 187.5, 50] [ 187.5, 49] [ 187.5, 48] [ 187.5, 47] [ 187.5, 46] [ 187.5, 45] [ 187.5, 44] [ 187.5, 43] [ 187.5, 42] [ 187.5, 41] [ 187.5, 40] [ 187.5, 39] [ 187.5, 38] [ 187.5, 37] [ 187.5, 36] [ 187.5, 35] [ 187.5, 34] [ 187.5, 33]
-[ 134.5, 38.5] [ 136, 38.5] [ 137.5, 38.5] [ 138, 39.5] [ 139.5, 39.5] [ 140.5, 40.5] [ 141.5, 41.5] [ 141.5, 43] [ 142.5, 43.5] [ 142.5, 45] [ 143.5, 45.5] [ 143.5, 47] [ 144.5, 47.5] [ 144.5, 49] [ 145.5, 49.5] [ 145.5, 51] [ 145.5, 52] [ 146.5, 52.5] [ 146.5, 54] [ 146.5, 55] [ 146.5, 56] [ 147.5, 56.5] [ 147.5, 58] [ 147.5, 59] [ 147.5, 60] [ 148.5, 60.5] [ 148.5, 62] [ 148.5, 63] [ 148.5, 64] [ 149.5, 64.5] [ 149.5, 66] [ 149.5, 67] [ 149.5, 68] [ 149.5, 69] [ 150.5, 69.5] [ 150.5, 71] [ 150.5, 72] [ 150.5, 73] [ 150.5, 74] [ 150.5, 75] [ 151.5, 75.5] [ 151.5, 77] [ 151.5, 78] [ 151.5, 79] [ 151.5, 80] [ 151.5, 81] [ 151.5, 82] [ 151.5, 83] [ 152.5, 83.5] [ 152.5, 85] [ 152.5, 86] [ 152.5, 87] [ 152.5, 88] [ 152.5, 89] [ 152.5, 90] [ 152.5, 91] [ 152.5, 92] [ 153.5, 92.5] [ 153.5, 94] [ 153.5, 95] [ 153.5, 96] [ 153.5, 97] [ 153.5, 98] [ 153.5, 99] [ 153.5, 100] [ 153.5, 101] [ 153.5, 102] [ 153.5, 103] [ 153.5, 104] [ 153.5, 105] [ 153.5, 106] [ 153.5, 107] [ 154.5, 107.5] [ 154.5, 109] [ 154.5, 110] [ 154.5, 111] [ 154.5, 112] [ 154.5, 113] [ 154.5, 114] [ 154.5, 115] [ 154.5, 116] [ 154.5, 117] [ 154.5, 118] [ 154.5, 119] [ 154.5, 120] [ 154.5, 121] [ 154.5, 122] [ 154.5, 123] [ 154.5, 124] [ 154.5, 125] [ 154.5, 126] [ 154.5, 127] [ 154.5, 128] [ 154.5, 129] [ 154.5, 130] [ 154.5, 131] [ 154.5, 132] [ 154.5, 133] [ 154.5, 134] [ 154.5, 135] [ 154.5, 136] [ 154.5, 137] [ 154.5, 138] [ 154.5, 139] [ 154.5, 140] [ 154.5, 141] [ 154.5, 142] [ 154.5, 143] [ 154.5, 144] [ 154.5, 145] [ 154.5, 146] [ 154.5, 147] [ 154.5, 148] [ 154.5, 149.5] [ 153.5, 150] [ 153.5, 151] [ 153.5, 152] [ 153.5, 153] [ 153.5, 154] [ 153.5, 155] [ 153.5, 156] [ 153.5, 157] [ 153.5, 158] [ 153.5, 159] [ 153.5, 160] [ 153.5, 161] [ 153.5, 162] [ 153.5, 163] [ 153.5, 164.5] [ 152.5, 165] [ 152.5, 166] [ 152.5, 167] [ 152.5, 168] [ 152.5, 169] [ 152.5, 170] [ 152.5, 171] [ 152.5, 172] [ 152.5, 173.5] [ 151.5, 174] [ 151.5, 175] [ 151.5, 176] [ 151.5, 177] [ 151.5, 178] [ 151.5, 179] [ 151.5, 180] [ 151.5, 181.5] [ 150.5, 182] [ 150.5, 183] [ 150.5, 184] [ 150.5, 185] [ 150.5, 186] [ 150.5, 187.5] [ 149.5, 188] [ 149.5, 189] [ 149.5, 190] [ 149.5, 191] [ 149.5, 192.5] [ 148.5, 193] [ 148.5, 194] [ 148.5, 195] [ 148.5, 196.5] [ 147.5, 197] [ 147.5, 198] [ 147.5, 199] [ 147.5, 200.5] [ 146.5, 201] [ 146.5, 202] [ 146.5, 203] [ 146.5, 204.5] [ 145.5, 205] [ 145.5, 206] [ 145.5, 207.5] [ 144.5, 208] [ 144.5, 209.5] [ 143.5, 210] [ 143.5, 211.5] [ 142.5, 212] [ 142.5, 213.5] [ 141.5, 214] [ 141.5, 215.5] [ 140.5, 216.5] [ 139.5, 217.5] [ 138, 217.5] [ 137.5, 218.5] [ 136, 218.5] [ 134.5, 218.5] [ 134, 217.5] [ 132.5, 217.5] [ 131.5, 216.5] [ 130.5, 215.5] [ 130.5, 214] [ 129.5, 213.5] [ 129.5, 212] [ 128.5, 211.5] [ 128.5, 210] [ 127.5, 209.5] [ 127.5, 208] [ 126.5, 207.5] [ 126.5, 206] [ 126.5, 205] [ 125.5, 204.5] [ 125.5, 203] [ 125.5, 202] [ 125.5, 201] [ 124.5, 200.5] [ 124.5, 199] [ 124.5, 198] [ 124.5, 197] [ 123.5, 196.5] [ 123.5, 195] [ 123.5, 194] [ 123.5, 193] [ 122.5, 192.5] [ 122.5, 191] [ 122.5, 190] [ 122.5, 189] [ 122.5, 188] [ 121.5, 187.5] [ 121.5, 186] [ 121.5, 185] [ 121.5, 184] [ 121.5, 183] [ 121.5, 182] [ 120.5, 181.5] [ 120.5, 180] [ 120.5, 179] [ 120.5, 178] [ 120.5, 177] [ 120.5, 176] [ 120.5, 175] [ 120.5, 174] [ 119.5, 173.5] [ 119.5, 172] [ 119.5, 171] [ 119.5, 170] [ 119.5, 169] [ 119.5, 168] [ 119.5, 167] [ 119.5, 166] [ 119.5, 165] [ 118.5, 164.5] [ 118.5, 163] [ 118.5, 162] [ 118.5, 161] [ 118.5, 160] [ 118.5, 159] [ 118.5, 158] [ 118.5, 157] [ 118.5, 156] [ 118.5, 155] [ 118.5, 154] [ 118.5, 153] [ 118.5, 152] [ 118.5, 151] [ 118.5, 150] [ 117.5, 149.5] [ 117.5, 148] [ 117.5, 147] [ 117.5, 146] [ 117.5, 145] [ 117.5, 144] [ 117.5, 143] [ 117.5, 142] [ 117.5, 141] [ 117.5, 140] [ 117.5, 139] [ 117.5, 138] [ 117.5, 137] [ 117.5, 136] [ 117.5, 135] [ 117.5, 134] [ 117.5, 133] [ 117.5, 132] [ 117.5, 131] [ 117.5, 130] [ 117.5, 129] [ 117.5, 128] [ 117.5, 127] [ 117.5, 126] [ 117.5, 125] [ 117.5, 124] [ 117.5, 123] [ 117.5, 122] [ 117.5, 121] [ 117.5, 120] [ 117.5, 119] [ 117.5, 118] [ 117.5, 117] [ 117.5, 116] [ 117.5, 115] [ 117.5, 114] [ 117.5, 113] [ 117.5, 112] [ 117.5, 111] [ 117.5, 110] [ 117.5, 109] [ 117.5, 107.5] [ 118.5, 107] [ 118.5, 106] [ 118.5, 105] [ 118.5, 104] [ 118.5, 103] [ 118.5, 102] [ 118.5, 101] [ 118.5, 100] [ 118.5, 99] [ 118.5, 98] [ 118.5, 97] [ 118.5, 96] [ 118.5, 95] [ 118.5, 94] [ 118.5, 92.5] [ 119.5, 92] [ 119.5, 91] [ 119.5, 90] [ 119.5, 89] [ 119.5, 88] [ 119.5, 87] [ 119.5, 86] [ 119.5, 85] [ 119.5, 83.5] [ 120.5, 83] [ 120.5, 82] [ 120.5, 81] [ 120.5, 80] [ 120.5, 79] [ 120.5, 78] [ 120.5, 77] [ 120.5, 75.5] [ 121.5, 75] [ 121.5, 74] [ 121.5, 73] [ 121.5, 72] [ 121.5, 71] [ 121.5, 69.5] [ 122.5, 69] [ 122.5, 68] [ 122.5, 67] [ 122.5, 66] [ 122.5, 64.5] [ 123.5, 64] [ 123.5, 63] [ 123.5, 62] [ 123.5, 60.5] [ 124.5, 60] [ 124.5, 59] [ 124.5, 58] [ 124.5, 56.5] [ 125.5, 56] [ 125.5, 55] [ 125.5, 54] [ 125.5, 52.5] [ 126.5, 52] [ 126.5, 51] [ 126.5, 49.5] [ 127.5, 49] [ 127.5, 47.5] [ 128.5, 47] [ 128.5, 45.5] [ 129.5, 45] [ 129.5, 43.5] [ 130.5, 43] [ 130.5, 41.5] [ 131.5, 40.5] [ 132.5, 39.5] [ 134, 39.5]
-[ 19.5, 30.5] [ 21, 30.5] [ 22, 30.5] [ 23, 30.5] [ 24, 30.5] [ 25, 30.5] [ 26, 30.5] [ 27, 30.5] [ 28, 30.5] [ 29, 30.5] [ 30, 30.5] [ 31, 30.5] [ 32, 30.5] [ 33, 30.5] [ 34, 30.5] [ 35, 30.5] [ 36, 30.5] [ 37, 30.5] [ 38, 30.5] [ 39, 30.5] [ 40, 30.5] [ 41, 30.5] [ 42, 30.5] [ 43, 30.5] [ 44, 30.5] [ 45, 30.5] [ 46, 30.5] [ 47, 30.5] [ 48, 30.5] [ 49, 30.5] [ 50, 30.5] [ 51, 30.5] [ 52, 30.5] [ 53, 30.5] [ 54, 30.5] [ 55, 30.5] [ 56, 30.5] [ 57, 30.5] [ 58, 30.5] [ 59, 30.5] [ 60, 30.5] [ 61, 30.5] [ 62, 30.5] [ 63, 30.5] [ 64, 30.5] [ 65, 30.5] [ 66, 30.5] [ 67, 30.5] [ 68, 30.5] [ 69, 30.5] [ 70, 30.5] [ 71, 30.5] [ 72, 30.5] [ 73, 30.5] [ 74, 30.5] [ 75, 30.5] [ 76, 30.5] [ 77, 30.5] [ 78, 30.5] [ 79, 30.5] [ 80, 30.5] [ 81, 30.5] [ 82, 30.5] [ 83, 30.5] [ 84.5, 30.5] [ 84.5, 32] [ 84.5, 33] [ 84.5, 34] [ 84.5, 35] [ 84.5, 36] [ 84.5, 37] [ 84.5, 38] [ 84.5, 39] [ 84.5, 40] [ 84.5, 41] [ 84.5, 42] [ 84.5, 43] [ 84.5, 44] [ 84.5, 45] [ 84.5, 46] [ 84.5, 47] [ 84.5, 48] [ 84.5, 49] [ 84.5, 50] [ 84.5, 51] [ 84.5, 52] [ 84.5, 53] [ 84.5, 54] [ 84.5, 55] [ 84.5, 56] [ 84.5, 57] [ 84.5, 58] [ 84.5, 59] [ 84.5, 60] [ 84.5, 61] [ 84.5, 62] [ 84.5, 63] [ 84.5, 64] [ 84.5, 65] [ 84.5, 66] [ 84.5, 67] [ 84.5, 68] [ 84.5, 69] [ 84.5, 70] [ 84.5, 71] [ 84.5, 72] [ 84.5, 73] [ 84.5, 74] [ 84.5, 75] [ 84.5, 76] [ 84.5, 77] [ 84.5, 78] [ 84.5, 79] [ 84.5, 80] [ 84.5, 81] [ 84.5, 82] [ 84.5, 83] [ 84.5, 84] [ 84.5, 85] [ 84.5, 86] [ 84.5, 87] [ 84.5, 88] [ 84.5, 89] [ 84.5, 90] [ 84.5, 91] [ 84.5, 92] [ 84.5, 93] [ 84.5, 94.5] [ 83, 94.5] [ 82, 94.5] [ 81, 94.5] [ 80, 94.5] [ 79, 94.5] [ 78, 94.5] [ 77, 94.5] [ 76, 94.5] [ 75, 94.5] [ 74, 94.5] [ 73, 94.5] [ 72, 94.5] [ 71, 94.5] [ 70, 94.5] [ 69, 94.5] [ 68, 94.5] [ 67, 94.5] [ 66, 94.5] [ 65, 94.5] [ 64, 94.5] [ 63, 94.5] [ 62, 94.5] [ 61, 94.5] [ 60, 94.5] [ 59, 94.5] [ 58, 94.5] [ 57, 94.5] [ 56, 94.5] [ 55, 94.5] [ 54, 94.5] [ 53, 94.5] [ 52, 94.5] [ 51, 94.5] [ 50, 94.5] [ 49, 94.5] [ 48, 94.5] [ 47, 94.5] [ 46, 94.5] [ 45, 94.5] [ 44, 94.5] [ 43, 94.5] [ 42, 94.5] [ 41, 94.5] [ 40, 94.5] [ 39, 94.5] [ 38, 94.5] [ 37, 94.5] [ 36, 94.5] [ 35, 94.5] [ 34, 94.5] [ 33, 94.5] [ 32, 94.5] [ 31, 94.5] [ 30, 94.5] [ 29, 94.5] [ 28, 94.5] [ 27, 94.5] [ 26, 94.5] [ 25, 94.5] [ 24, 94.5] [ 23, 94.5] [ 22, 94.5] [ 21, 94.5] [ 19.5, 94.5] [ 19.5, 93] [ 19.5, 92] [ 19.5, 91] [ 19.5, 90] [ 19.5, 89] [ 19.5, 88] [ 19.5, 87] [ 19.5, 86] [ 19.5, 85] [ 19.5, 84] [ 19.5, 83] [ 19.5, 82] [ 19.5, 81] [ 19.5, 80] [ 19.5, 79] [ 19.5, 78] [ 19.5, 77] [ 19.5, 76] [ 19.5, 75] [ 19.5, 74] [ 19.5, 73] [ 19.5, 72] [ 19.5, 71] [ 19.5, 70] [ 19.5, 69] [ 19.5, 68] [ 19.5, 67] [ 19.5, 66] [ 19.5, 65] [ 19.5, 64] [ 19.5, 63] [ 19.5, 62] [ 19.5, 61] [ 19.5, 60] [ 19.5, 59] [ 19.5, 58] [ 19.5, 57] [ 19.5, 56] [ 19.5, 55] [ 19.5, 54] [ 19.5, 53] [ 19.5, 52] [ 19.5, 51] [ 19.5, 50] [ 19.5, 49] [ 19.5, 48] [ 19.5, 47] [ 19.5, 46] [ 19.5, 45] [ 19.5, 44] [ 19.5, 43] [ 19.5, 42] [ 19.5, 41] [ 19.5, 40] [ 19.5, 39] [ 19.5, 38] [ 19.5, 37] [ 19.5, 36] [ 19.5, 35] [ 19.5, 34] [ 19.5, 33] [ 19.5, 32]
+[ 2.5, -0.5] [ 4, -0.5] [ 5, -0.5] [ 6, -0.5] [ 7, -0.5] [ 8, -0.5] [ 9, -0.5] [ 10, -0.5] [ 11, -0.5] [ 12, -0.5] [ 13, -0.5] [ 14, -0.5] [ 15, -0.5] [ 16, -0.5] [ 17.5, -0.5] [ 17.5, 1] [ 17.5, 2.5] [ 16, 2.5] [ 15, 2.5] [ 14, 2.5] [ 13.5, 3] [ 13.5, 4] [ 13.5, 5.5] [ 12, 5.5] [ 11, 5.5] [ 10, 5.5] [ 9, 5.5] [ 8, 5.5] [ 6.5, 5.5] [ 6.5, 4] [ 6.5, 3] [ 6, 2.5] [ 5, 2.5] [ 4, 2.5] [ 2.5, 2.5] [ 2.5, 1]
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- 340.500 461.500
- 340.500 462.500
- 346.500 471.500
- 165.500 476.500
- 288.500 499.500
- 378.783 185.867
- 406.723 192.698
- 165.241 266.871
- 159.254 278.478
- 100.380 328.619
- 233.095 417.318
- 332.881 443.858
- 333.879 443.924
- 326.894 444.466
- 325.896 444.400
- 310.928 444.419
- 309.930 444.354
- 294.962 444.373
- 295.960 444.438
- 273.010 443.934
- 205.155 443.487
- 204.157 443.421
- 189.189 443.440
- 340.864 461.381
- 340.864 462.381
- 320.907 462.073
- 275.005 462.065
- 228.106 471.991
- 166.239 476.936
- 387.561 129.315
- 375.663 186.748
- 361.783 189.921
- 360.792 189.791
- 166.469 262.207
- 150.606 279.119
- 333.031 462.136
- 369.267 186.407
- 358.478 190.261
- 420.268 222.552
- 372.209 212.992
- 390.844 217.699
- 335.920 254.774
- 147.609 279.317
- 136.821 278.171
- 490.884 356.598
- 505.596 359.525
- 367.543 179.195
- 378.168 216.042
- 297.996 198.560
- 363.679 263.160
- 136.687 278.337
- 126.062 276.490
- 101.913 383.020
- 364.673 178.998
- 365.620 179.320
- 121.312 275.388
- 379.557 137.926
- 337.554 186.941
- 335.169 198.964
- 462.382 215.302
- 432.309 266.928
- 453.360 287.390
- 465.245 220.245
- 454.639 209.639
- 210.687 195.687
- 211.394 196.394
- 351.051 144.868
- 351.500 147.104
- 351.000 147.238
- 349.507 148.038
- 509.214 489.712
- 508.893 489.765
- 509.465 491.636
- 509.206 491.670
- 508.688 490.739
- 423.490 41.070
- 420.173 26.396
- 420.173 30.396
- 384.885 492.383
- 368.078 499.443
- 367.284 498.558
- 448.100 482.194
- 449.203 481.751
- 150.096 311.096
- 159.323 323.292
- 158.345 321.036
- 158.441 324.062
- 158.832 323.269
- 158.006 320.889
- 157.386 321.756
- 51.673 496.620
- 84.498 487.697
- 315.363 441.099
- 80.688 467.592
- 166.559 358.825
- 166.886 363.815
- 269.650 497.528
- 253.478 159.254
- 253.432 143.288
- 252.470 113.352
- 252.404 112.354
- 274.922 440.650
- 251.377 81.421
- 251.442 82.419
- 251.461 67.451
- 250.480 52.483
- 250.434 36.517
- 260.451 128.320
- 332.922 440.650
- 441.254 125.326
- 449.862 119.339
- 464.704 86.410
- 473.872 58.470
- 79.500 454.500
- 80.500 478.500
- 141.500 491.500
- 142.500 485.500
- 215.500 454.500
- 215.500 453.500
- 228.500 498.500
- 235.500 441.500
- 248.500 498.500
- 249.500 28.500
- 250.500 83.500
- 251.500 112.500
- 252.500 145.500
- 253.500 162.500
- 253.500 161.500
- 254.500 436.500
- 254.500 437.500
- 257.500 145.500
- 260.500 132.500
- 266.500 125.500
- 268.500 106.500
- 269.500 498.500
- 274.500 436.500
- 290.500 138.500
- 433.500 102.500
- 438.500 79.500
- 452.500 47.500
- 464.500 115.500
- 471.500 87.500
- 474.500 92.500
- 156.078 440.650
- 250.558 82.419
- 228.612 493.536
- 257.558 82.419
- 253.522 159.254
- 255.830 139.296
- 266.511 98.384
- 268.689 80.423
- 271.372 146.281
- 294.923 107.365
- 297.054 105.369
- 491.128 58.470
- 155.506 442.090
- 252.578 137.717
- 274.273 147.631
- 289.927 119.871
- 292.494 107.973
- 412.205 406.398
- 405.504 464.894
- 393.377 485.980
- 398.474 465.384
- 399.059 462.442
- 407.083 427.133
- 410.424 415.364
- 417.472 384.959
- 405.279 466.365
- 437.665 343.767
- 437.470 344.747
- 344.793 259.359
- 412.523 398.453
- 406.017 426.464
- 395.888 467.999
- 392.523 480.556
- 390.935 490.216
- 396.123 496.977
- 390.572 489.668
- 180.137 373.766
- 186.495 360.832
- 165.902 400.185
- 153.000 376.266
- 151.391 377.465
- 252.205 501.474
- 256.205 501.474
- 260.198 501.278
- 260.200 501.344
- 260.202 501.409
- 260.205 501.474
- 264.198 501.278
- 391.162 500.166
- 391.164 500.232
- 391.166 500.297
- 391.168 500.363
- 391.170 500.428
- 391.172 500.493
- 393.170 500.428
- 393.172 500.493
- 395.170 500.428
- 395.172 500.493
- 397.170 500.428
- 397.172 500.493
- 399.170 500.428
- 422.170 500.428
- 422.172 500.493
- 424.170 500.428
- 424.172 500.493
- 170.864 228.008
- 110.917 338.054
- 168.375 219.000
- 106.887 339.500
- 369.256 123.951
- 352.454 112.033
- 148.217 281.921
- 106.576 385.403
- 111.533 384.751
- 167.054 446.441
- 251.958 4.953
- 304.845 5.487
- 305.843 5.421
- 321.808 113.375
- 353.740 188.282
- 363.719 201.628
- 129.222 262.998
- 103.277 384.698
- 176.121 415.924
- 243.975 416.476
- 258.943 416.495
- 117.247 448.782
- 117.247 449.782
- 184.104 446.400
- 214.040 445.438
- 299.856 445.814
- 310.832 446.094
- 307.838 446.290
- 197.076 477.550
- 217.033 477.242
- 269.920 476.776
- 274.909 477.449
- 275.907 477.383
- 289.877 477.468
- 251.500 4.500
- 255.500 5.500
- 347.500 187.500
- 352.500 188.500
- 353.500 201.500
- 137.500 262.500
- 140.500 281.500
- 141.500 294.500
- 140.500 294.500
- 136.500 296.500
- 96.500 384.500
- 99.500 397.500
- 154.500 415.500
- 174.500 416.500
- 197.500 442.500
- 198.500 442.500
- 157.500 445.500
- 286.500 446.500
- 130.500 459.500
- 171.500 464.500
- 155.500 469.500
- 147.500 470.500
- 199.500 476.500
- 170.500 476.500
- 169.500 477.500
- 420.500 498.500
- 25.500 500.500
- 359.727 184.111
- 342.763 186.999
- 132.215 262.199
- 99.286 398.040
- 257.945 415.439
- 243.975 415.524
- 239.984 416.262
- 218.031 415.823
- 170.134 415.684
- 113.256 412.956
- 304.845 445.513
- 289.877 445.532
- 219.029 442.889
- 199.072 442.581
- 200.070 442.646
- 312.828 470.037
- 241.980 469.393
- 156.164 464.768
- 305.843 476.579
- 184.104 469.600
- 274.909 476.551
- 270.918 477.290
- 229.008 476.543
- 214.040 476.562
- 418.601 497.969
- 325.685 45.443
- 352.454 181.967
- 355.429 183.359
- 345.514 185.054
- 339.566 185.270
- 343.531 186.793
- 323.702 222.182
- 126.405 234.207
- 118.473 278.163
- 181.926 415.517
- 238.438 467.957
- 432.761 498.540
- 434.969 132.120
- 333.948 169.026
- 353.563 173.928
- 346.698 179.562
- 348.660 180.952
- 351.602 181.537
- 345.717 185.367
- 335.909 184.416
- 324.140 221.075
- 120.137 231.496
- 122.098 232.886
- 86.790 337.863
- 349.640 482.147
- 359.448 485.098
- 436.098 129.486
- 340.472 168.863
- 334.676 168.310
- 339.506 175.604
- 347.233 179.675
- 262.232 374.899
- 84.501 381.276
- 351.097 481.710
- 353.029 483.228
- 351.097 485.710
- 352.705 171.397
- 342.289 168.861
- 340.395 169.218
- 301.571 172.039
- 114.079 228.394
- 365.015 484.576
- 353.652 481.718
- 356.493 482.683
- 346.879 168.389
- 345.955 170.006
- 341.335 169.093
- 71.006 253.279
- 21.018 395.796
- 21.999 411.763
- 21.933 411.766
- 21.868 411.768
- 21.802 411.770
- 21.737 411.772
- 21.672 411.774
- 21.606 411.776
- 21.541 411.778
- 21.606 413.776
- 21.541 413.778
- 21.606 415.776
- 21.541 415.778
- 21.606 417.776
- 21.606 418.776
- 21.541 417.778
- 21.541 418.778
- 21.606 420.776
- 21.541 419.778
- 21.541 420.778
- 21.737 424.772
- 21.672 423.774
- 21.606 423.776
- 21.672 424.774
- 21.606 424.776
- 21.541 423.778
- 21.541 424.778
- 21.606 426.776
- 21.541 425.778
- 21.541 426.778
- 21.606 428.776
- 21.541 427.778
- 21.541 428.778
- 21.606 430.776
- 21.541 430.778
- 21.606 432.776
- 21.541 432.778
- 21.606 434.776
- 21.541 434.778
- 21.606 436.776
- 21.541 441.778
- 21.606 443.776
- 21.541 443.778
- 22.129 454.759
- 22.129 455.759
- 22.064 454.761
- 21.999 454.763
- 21.868 454.768
- 21.868 455.768
- 21.802 454.770
- 21.737 454.772
- 21.737 455.772
- 21.672 454.774
- 21.606 454.776
- 21.606 455.776
- 21.541 454.778
- 21.737 458.772
- 21.541 455.778
- 21.672 458.774
- 21.606 458.776
- 21.541 457.778
- 21.541 458.778
- 21.606 460.776
- 21.541 459.778
- 21.541 460.778
- 21.737 464.772
- 21.672 464.774
- 21.606 464.776
- 21.541 463.778
- 21.541 464.778
- 21.606 466.776
- 21.541 466.778
- 21.606 468.776
diff --git a/Data/Baseline/OTB/Files/feBreakAngularPathListOutput.txt b/Data/Baseline/OTB/Files/feBreakAngularPathListOutput.txt
deleted file mode 100644
index 0f5ea993520cabcf3ff996765f2e7c2173b782cb..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feBreakAngularPathListOutput.txt
+++ /dev/null
@@ -1,171 +0,0 @@
---------------------------------------------------------------------------
-MAX ANGULAR :0.174533(10 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 3: [11, 1], [21, 11]
-Path 4: [21, 11], [31, 11]
-Path 5: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 6: [11, 1], [21, 11]
-Path 7: [21, 11], [31, 11], [41, 11]
-Path 8: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 9: [11, 1], [21, 11]
-Path 10: [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 11: [1, 11], [5, 11], [7, 11], [11, 11]
-Path 12: [11, 11], [21, 1]
-Path 13: [21, 1], [31, 1], [41, 1]
-Path 14: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 15: [11, 1], [21, 11], [31, 21], [41, 31]
-Path 16: [1, 1], [5, 1]
-Path 17: [5, 1], [5, 11], [5, 21]
-Path 18: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :0.349066(20 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 3: [11, 1], [21, 11]
-Path 4: [21, 11], [31, 11]
-Path 5: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 6: [11, 1], [21, 11]
-Path 7: [21, 11], [31, 11], [41, 11]
-Path 8: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 9: [11, 1], [21, 11]
-Path 10: [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 11: [1, 11], [5, 11], [7, 11], [11, 11]
-Path 12: [11, 11], [21, 1]
-Path 13: [21, 1], [31, 1], [41, 1]
-Path 14: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 15: [11, 1], [21, 11], [31, 21], [41, 31]
-Path 16: [1, 1], [5, 1]
-Path 17: [5, 1], [5, 11], [5, 21]
-Path 18: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :0.523599(30 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 3: [11, 1], [21, 11]
-Path 4: [21, 11], [31, 11]
-Path 5: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 6: [11, 1], [21, 11]
-Path 7: [21, 11], [31, 11], [41, 11]
-Path 8: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 9: [11, 1], [21, 11]
-Path 10: [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 11: [1, 11], [5, 11], [7, 11], [11, 11]
-Path 12: [11, 11], [21, 1]
-Path 13: [21, 1], [31, 1], [41, 1]
-Path 14: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 15: [11, 1], [21, 11], [31, 21], [41, 31]
-Path 16: [1, 1], [5, 1]
-Path 17: [5, 1], [5, 11], [5, 21]
-Path 18: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :0.872665(50 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1]
-Path 8: [5, 1], [5, 11], [5, 21]
-Path 9: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :1.5708(90 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :2.44346(140 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
---------------------------------------------------------------------------
-MAX ANGULAR :3.14159(180 deg.)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
-OUTPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-Path 5: [1, 11], [5, 11], [7, 11], [11, 11], [21, 1], [31, 1], [41, 1]
-Path 6: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 21], [41, 31]
-Path 7: [1, 1], [5, 1], [5, 11], [5, 21]
-Path 8: [1, 1], [31, 1], [41, 1]
diff --git a/Data/Baseline/OTB/Files/feTvLikelihoodPathOutput.txt b/Data/Baseline/OTB/Files/feTvLikelihoodPathOutput.txt
deleted file mode 100644
index 7e18b94533e5f25319caa19feb2f28bd5c96573a..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feTvLikelihoodPathOutput.txt
+++ /dev/null
@@ -1,8 +0,0 @@
-INPUT list of Path :
-Path 1: [157, 335], [204, 376]
-Path 2: [21, 305], [35, 308], [77, 354], [85, 358]
-Path 3: [73, 160], [126, 173]
-OUTPUT list of Path :
-Path 1: [157, 335], [204, 376] Value: 4.68584e-07
-Path 2: [21, 305], [35, 308], [77, 354], [85, 358] Value: 1.87363e-07
-Path 3: [73, 160], [126, 173] Value: 9.76259e-08
diff --git a/Data/Baseline/OTB/Files/feTvLinkPathOutput.txt b/Data/Baseline/OTB/Files/feTvLinkPathOutput.txt
deleted file mode 100644
index 708fabe135918d33f8ab62d9af7bba6f1b48bf2d..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feTvLinkPathOutput.txt
+++ /dev/null
@@ -1,23 +0,0 @@
-Maximum distance threshold: 30 (30)
-Maximum angle threshold: 0.698132 (40)
-INPUT list of Path :
-Path 1: [1, 1], [51, 1]
-Path 2: [61, 1], [91, 1]
-Path 3: [111, 11], [211, 11]
-Path 4: [1, 51], [51, 51]
-Path 5: [71, 71], [71, 91]
-Path 6: [71, 131], [71, 201]
-Path 7: [141, 111], [101, 111]
-Path 8: [151, 111], [191, 111]
-Path 9: [111, 71], [141, 71]
-Path 10: [181, 71], [151, 71]
-Path 11: [11, 131], [11, 101]
-Path 12: [11, 171], [11, 141]
-OUTPUT list of Path :
-Path 1: [1, 51], [51, 51]
-Path 2: [71, 71], [71, 91]
-Path 3: [71, 131], [71, 201]
-Path 4: [211, 11], [111, 11], [91, 1], [61, 1], [51, 1], [1, 1]
-Path 5: [101, 111], [141, 111], [151, 111], [191, 111]
-Path 6: [111, 71], [141, 71], [151, 71], [181, 71]
-Path 7: [11, 101], [11, 131], [11, 141], [11, 171]
diff --git a/Data/Baseline/OTB/Files/feTvRemoveTortuousPathOutput.txt b/Data/Baseline/OTB/Files/feTvRemoveTortuousPathOutput.txt
deleted file mode 100644
index fffefd4d766972197ca2a3b918db2f8e303d2fc5..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feTvRemoveTortuousPathOutput.txt
+++ /dev/null
@@ -1,8 +0,0 @@
-Minimum Mean Distance: 10 (10)
-INPUT list of Path :
-Path 1: [1, 1], [1, 11]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1]
-Path 3: [1, 1], [7, 7], [21, 21], [31, 31], [41, 41]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-OUTPUT list of Path :
-Path 1: [1, 1], [7, 7], [21, 21], [31, 31], [41, 41]
diff --git a/Data/Baseline/OTB/Files/feTvSimplifyPathOutput.txt b/Data/Baseline/OTB/Files/feTvSimplifyPathOutput.txt
deleted file mode 100644
index 1da7ddfb7e7e9e2d787dcd41ac9d007c39a44af7..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feTvSimplifyPathOutput.txt
+++ /dev/null
@@ -1,11 +0,0 @@
-TOLERANCE: 1(1)
-INPUT list of Path :
-Path 1: [1, 1], [5, 1], [7, 1], [11, 1], [21, 1], [31, 1]
-Path 2: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [5, 5], [7, 7], [11, 11], [21, 21], [31, 31], [41, 41]
-Path 4: [1, 1], [5, 1], [7, 1], [11, 1], [21, 11], [31, 11], [41, 11], [58, 11], [70, 11]
-OUTPUT list of Path :
-Path 1: [1, 1], [31, 1]
-Path 2: [1, 1], [11, 1], [21, 11], [31, 11]
-Path 3: [1, 1], [41, 41]
-Path 4: [1, 1], [11, 1], [21, 11], [70, 11]
diff --git a/Data/Baseline/OTB/Files/feTvVectorizationPathListOutput.txt b/Data/Baseline/OTB/Files/feTvVectorizationPathListOutput.txt
deleted file mode 100644
index 348001835a5c6b8f4c03b9562ef9b47f41688704..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/feTvVectorizationPathListOutput.txt
+++ /dev/null
@@ -1,385 +0,0 @@
-Path 0: [523, 4], [522, 4], [521.519, 5], [521, 5.47291], [520.558, 6], [520, 6.41957], [519.517, 7], [519, 7.20893], [519, 8]
-Path 1: [666, 0], [666, 0.755514], [666.534, 1], [667, 1.54937], [668, 2], [669, 2], [670, 3], [671, 4], [671, 5], [672, 5.56069], [673, 6.5845], [673, 8], [673.481, 9], [674, 9.47953], [674.36, 10], [675, 10.6091], [675.621, 12], [676.458, 13], [677, 13.577], [677, 15], [677, 16], [677.422, 17], [678, 17.4808], [678, 18], [678.364, 19], [679, 19], [680, 19.9039]
-Path 2: [595, 4.40433], [594, 5], [593, 6.39503], [592.184, 7], [592, 7.50127], [591, 8.36608], [590, 9.17569], [589, 10], [588, 11], [587, 11], [586.346, 12], [585, 12.5495], [584.553, 14], [584, 14.5519], [583.543, 16], [583, 16.5361], [582.445, 18], [581.502, 19], [581, 19.513], [580, 20.6132], [579.468, 22], [578.542, 23], [578, 23.4978], [577.545, 24], [577, 24.5768], [576.326, 26], [575.445, 27], [574.581, 28], [574, 28.6009], [573.411, 30], [572.445, 31], [571.434, 32], [570.481, 33], [570, 34], [569.454, 35], [568.566, 36], [568, 36.5643], [567.429, 38], [566.521, 39], [566, 39.6024], [565.476, 41], [565, 42], [564.421, 43], [563.547, 44], [563, 44.543], [562, 45.6124], [561.433, 47], [561, 48], [560.393, 49], [559.581, 50], [559, 50.5958], [558.48, 52], [557.499, 53], [556.523, 54], [556, 54.5515], [555.42, 56], [555, 57], [554.467, 58], [554, 59], [553.446, 60], [552.531, 61], [552, 61.5413], [551.499, 63], [551, 64], [550.571, 65], [550, 65.5952], [549.552, 67], [549, 67.5817], [548.426, 69], [547.443, 70], [546.491, 71], [545.546, 72], [545, 72.5362], [544.436, 74], [543.477, 75], [542.467, 76], [541.449, 77], [540.513, 78], [540, 78.5659], [539.511, 80], [539, 80.5386], [538.448, 82], [537.487, 83], [536.504, 84], [536, 84.5229], [535, 85.5753], [534.473, 87], [534, 88], [533.428, 89], [532.493, 90], [531.545, 91], [531, 91.5473], [530.471, 93], [530, 94], [529.487, 95], [529, 96], [528.47, 97], [527.53, 98], [527, 98.5852], [526, 99.6065], [525.437, 101], [525, 102], [524.431, 103], [523.519, 104], [523, 104.522], [522, 105.524], [521, 106.55], [520.409, 108], [519.539, 109], [519, 109.546], [518.488, 111], [517.542, 112], [517, 112.57], [516, 113.611], [515.494, 115], [515, 116], [514.478, 117], [513.597, 118], [513, 118.568], [512.418, 120], [511.505, 121], [511, 121.593], [510.533, 123], [510, 123.522], [509.532, 125], [509, 125.535], [508.383, 127], [507.457, 128], [507, 129], [506.463, 130], [506, 131], [505.428, 132], [504.472, 133], [503.459, 134], [502.495, 135], [502, 136], [501.424, 137], [500.563, 138], [500, 138.53], [499.495, 140], [498.496, 141], [497.439, 142], [496.45, 143], [495.552, 144], [495, 144.55], [494.521, 146], [494, 146.501], [493, 147.526], [492, 148.568], [491.361, 150], [490.486, 151], [490, 152], [489.467, 153], [488.591, 154], [488, 154.596], [487.456, 156], [486.519, 157], [486, 157.591], [485.464, 159], [485, 160], [484.43, 161], [483.513, 162], [483, 162.518], [482, 163.551], [481.416, 165], [480.575, 166], [480, 166.58], [479.525, 168], [479, 168.519], [478, 169.568], [477.474, 171], [476.517, 172], [476, 172.565], [475.521, 174], [475, 174.584], [474.497, 176], [473.556, 177], [473, 177.588], [472.442, 179], [471.477, 180], [471, 181], [470.439, 182], [469.575, 183], [469, 183.578], [468.403, 185], [467.437, 186], [466.523, 187], [466, 187.574], [465.462, 189], [464.603, 190], [464, 190.593], [463.477, 192], [462.486, 193], [461.511, 194], [461, 194.557], [460.416, 196], [459.538, 197], [459, 197.547], [458.44, 199], [457.462, 200], [456.52, 201], [456, 201.543], [455.547, 203], [455, 203.535], [454.528, 205], [454, 205.47], [453.565, 206], [453, 206.526], [452, 207.595], [451.469, 209], [451, 210], [451, 211], [450.469, 212], [450, 213], [449.523, 214], [449, 214.559], [448.479, 216], [447.504, 217], [447, 217.563], [446, 218.567], [445.393, 220], [444.451, 221], [443.514, 222], [443, 222.543], [442, 223.567], [441.486, 225], [441, 226], [441, 227], [440.418, 228], [439.526, 229], [439, 229.43], [438.533, 230], [438, 230.467], [437.442, 231], [437, 232], [436.371, 233], [435.447, 234], [434.549, 235], [434, 235.55], [433, 236.579], [432, 237.609], [431.519, 239], [431, 239.544], [431, 241], [430.444, 242], [429.476, 243], [428.475, 244], [427.544, 245], [427, 245.597], [426.566, 247], [426, 247.584], [425.563, 249], [425, 249.555], [424.444, 251], [423.481, 252], [422.539, 253], [422, 253.552], [421.45, 255], [420.594, 256], [420, 256.601], [419.427, 258], [418.42, 259], [417.461, 260], [417, 261], [416.444, 262], [416, 263], [415.454, 264], [414.528, 265], [414, 265.546], [413.399, 267], [412.495, 268], [412, 269], [411.465, 270], [410.462, 271], [409.469, 272], [409, 273], [408.304, 274], [407.434, 275], [407, 276], [406.494, 277], [405.591, 278], [405, 278.578], [404.425, 280], [403.43, 281], [402.406, 282], [401.475, 283], [401, 284], [400.479, 285], [400, 286], [399.457, 287], [399, 288], [398.428, 289], [398, 290], [397.497, 291], [397, 292], [396.462, 293], [396, 294], [395.466, 295], [394.555, 296], [394, 296.644], [393, 297.65], [392.38, 299], [391.44, 300], [390.475, 301], [389.473, 302], [388.48, 303], [387.489, 304], [386.566, 305], [386, 305.582], [385.494, 307], [384.592, 308], [384, 308.591], [383.529, 310], [383, 310.566], [382.427, 312], [381.467, 313], [380.554, 314], [380, 314.589], [379.458, 316], [378.554, 317], [378, 317.506], [377, 318.589], [376, 319.614], [375.478, 321], [375, 322], [374.534, 323], [374, 323.561], [373.463, 325], [372.553, 326], [372, 326.537], [371.373, 328], [370.462, 329], [370, 330], [369.412, 331], [369, 332], [368.457, 333], [367.533, 334], [367, 334.558], [366, 335.554], [365.494, 337], [364.544, 338], [364, 338.567], [363.391, 340], [362.452, 341], [361.563, 342], [361, 342.549], [360.517, 344], [360, 344.503], [359, 345.583], [358, 346.599], [357, 347.605], [356.373, 349], [355.508, 350], [355, 350.572], [354.501, 352], [354, 352.542], [353.458, 354], [352.436, 355], [351.452, 356], [351, 357], [350.524, 358], [350, 358.496], [350, 359], [349.571, 360], [349, 360.549], [348.421, 362], [347.536, 363], [347, 363.619], [346.47, 365], [345.614, 366], [345, 366.55], [344.512, 368], [344, 368.529], [343, 369.573], [342.391, 371], [341.481, 372], [341, 373], [340.48, 374], [339.607, 375], [339, 375.466], [339, 376], [338.458, 377], [337, 377.581], [337, 379], [336.5, 380], [336, 381], [336, 382], [335.493, 383], [334.49, 384], [333.407, 385], [333, 386], [332.134, 387], [331, 387.535], [330.501, 389], [330, 389.586], [329.436, 391], [328.529, 392], [328, 392.45], [327.54, 393], [327, 393.503], [326, 394.572], [326, 396], [325.479, 397], [324.556, 398], [324, 398.589], [323.392, 400], [322.481, 401], [322, 402], [321.554, 403], [321, 403.575], [320.463, 405], [319.458, 406], [318.473, 407], [317.524, 408], [317, 408.554], [316.469, 410], [316, 411], [315.436, 412], [314.472, 413], [313.462, 414], [312.48, 415], [312, 416], [311.431, 417], [311, 418], [310.453, 419], [309.523, 420], [309, 420.48], [308.528, 421], [308, 421.51], [307, 422.548], [306.423, 424], [306, 425], [305.497, 426], [305, 427], [304.43, 428], [303.449, 429], [302.441, 430], [301.467, 431], [301, 432], [300.465, 433], [300, 434], [299.455, 435], [298.516, 436], [298, 436.49], [297.529, 437], [297, 437.48], [296.553, 438], [296, 438.55], [295.396, 440], [294.494, 441], [294, 442], [293.419, 443], [292.443, 444], [291.41, 445], [290.513, 446], [290, 446.581], [289.587, 448], [289, 448.568], [288.524, 450], [288, 450.526], [287, 451.555], [286.407, 453], [285.593, 454], [285, 454.589], [285, 456], [284.404, 457], [283.516, 458], [283, 458.556], [282.393, 460], [281.446, 461], [280.553, 462], [280, 462.554], [279.474, 464], [278.545, 465], [278, 465.531], [277, 466.552], [276, 467.568], [275, 468.603], [274.559, 470], [274, 470.531], [273.55, 472], [273, 472.543], [272.454, 474], [271.475, 475], [270.514, 476], [270, 476.597], [269.438, 478], [268.567, 479], [268, 479.532], [267.463, 481], [266.514, 482], [266, 482.493], [265.461, 483], [264.554, 484], [264, 484.59], [263.485, 486], [262.545, 487], [262, 487.511], [261, 488.558], [260.422, 490], [259.551, 491], [259, 491.58], [258.548, 493], [258, 493.545], [257.503, 495], [257, 495.531], [256, 496.569], [255.387, 498], [254.484, 499], [254, 500], [253.459, 501], [252.538, 502], [252, 502.517], [251, 503.562], [250.414, 505], [249.492, 506], [249, 507], [248.47, 508], [248, 509], [247.463, 510], [246.551, 511], [246, 511.572], [245.403, 513], [244.533, 514], [244, 514.57], [244, 516], [243.423, 517], [242.605, 518], [242, 518.531], [241.505, 520], [241, 520.46], [240.531, 521], [240, 521.522], [239, 522.615], [239, 524], [238.422, 525], [238, 526], [237.507, 527], [237, 527.554], [236.404, 529], [235.501, 530], [235, 530.581], [234.443, 532], [234, 533], [233.533, 534], [233, 534.53], [232.516, 536], [232, 536.509], [231, 537.504], [230, 538.505], [229, 539.539], [228.501, 541], [228, 541.497], [228, 542], [228, 543], [227.53, 544], [227, 544.516], [226.494, 546], [226, 547], [225.482, 548], [225, 549], [225, 550], [225, 551], [224.515, 552], [224, 552.51], [224, 554], [223.497, 555], [223, 556], [222.403, 557], [222, 558], [221.393, 559], [221, 560], [221, 561], [220.486, 562], [220, 563], [219.529, 564], [219, 564.561], [218.415, 566], [217.494, 567], [217, 568], [217, 569], [216.436, 570], [216, 571], [216, 572], [215.508, 573], [215, 573.534], [214.446, 575], [213.51, 576], [213, 576.54], [212, 577.579], [212, 579], [212, 580], [211.465, 581], [211, 582], [210.588, 583], [210, 583.55], [209.525, 585], [209, 585.53], [208, 586.596], [207.517, 588], [207, 588.591], [207, 590], [207, 591], [206.529, 592], [206, 592.505], [206, 594], [205.529, 595], [205, 595.532], [204.459, 597], [203.562, 598], [203, 598.607], [203, 600], [202.435, 601], [202, 602], [202, 603], [202, 604], [201.468, 605], [201, 606], [200.487, 607], [199.574, 608], [199, 608.581], [198.535, 610], [198, 610.571], [198, 612], [197.572, 613], [197, 613.487], [197, 614], [197, 615], [197, 616], [196.481, 617], [196, 618], [195.47, 619], [195, 620], [194.416, 621], [194, 622], [193.433, 623], [193, 624], [193, 625], [192.462, 626], [192, 627], [192, 628], [191.488, 629], [191, 630], [190.421, 631], [190, 632], [189.449, 633], [189, 634], [188.409, 635], [188, 636], [188, 637], [188, 638], [187.532, 639], [187, 639.531], [187, 641], [186.451, 642], [185.494, 643], [184.545, 644], [184, 644.566], [183.51, 646], [183, 646.54], [183, 648], [183, 649], [182.451, 650], [182, 651], [182, 652], [181.528, 653], [181, 653.542], [180.47, 655], [179.537, 656], [179, 656.539], [178.536, 658], [178, 658.538], [178, 660], [178, 661], [178, 662], [178, 663], [178, 664], [177.539, 665], [177, 665.459], [177, 666], [176.523, 667], [176, 667.545], [175.479, 669], [175, 670], [175, 671], [175, 672], [174.442, 673], [174, 674], [173.462, 675], [173, 676], [173, 677], [172.565, 678], [172, 678.505], [171, 679.533], [170.305, 681], [170, 682], [169.403, 683], [169, 684], [168.544, 685], [168, 685.535], [168, 687], [168, 688], [168, 689]
-Path 3: [510, 10], [509, 11], [508, 11], [507.425, 11], [506.563, 12], [506, 13], [506, 14], [505.388, 15], [504.551, 16], [504, 16.5955], [504, 18], [503.431, 19], [503, 20], [503, 21], [502.437, 22], [502, 23], [502, 24], [502, 25], [502.553, 26], [503.494, 27], [504, 27.4621], [504.389, 28], [505, 28.501]
-Path 4: [642, 14], [641, 15], [640, 15.2508], [639, 16], [638, 16.4707], [637, 17.3218], [635.536, 18], [634.546, 19], [634, 19.53], [633, 20.442], [632, 21.2918], [631, 22.1775], [630, 23], [629, 23.4577], [628, 24.3779], [627, 25.2208], [626, 26], [625, 26], [624.439, 27], [623.425, 28], [622.424, 29], [621.435, 30], [620.43, 31], [619.411, 32], [618.39, 33], [617.41, 34], [616.434, 35], [615.42, 36], [614.338, 37], [613, 38]
-Path 5: [505, 34], [504, 34], [504, 35], [503.679, 36], [503, 36]
-Path 6: [503, 38], [503, 38.5973], [504, 39], [504.441, 40], [505, 40.3571], [505.446, 41], [506, 41.363], [506.175, 42], [507, 42]
-Path 7: [611, 39], [610, 40], [609, 40], [608, 40.3808], [607, 41.3086], [606, 42], [605, 42.4634], [604, 43], [603.373, 44], [602.219, 45], [601, 45.376], [600.395, 46], [599.282, 47], [598.196, 48], [597, 48.5944], [596, 49.6023], [595, 50.5688], [594, 51.4515], [593.484, 52], [592.412, 53]
-Path 8: [990, 45], [989, 46], [988, 46], [987, 46.4471], [986.513, 47], [986, 47.4302], [985.459, 48], [984.427, 49], [983.423, 50], [982.291, 51], [981.047, 52], [980, 53], [979, 53]
-Path 9: [489, 47], [490, 47.4408], [490.551, 48], [491.611, 49], [493, 49.6206], [494, 50.555], [495, 51.5412], [495.606, 53], [496.612, 54], [498, 54.4771], [498.539, 55], [500, 55.5574], [501, 56.4921], [501.44, 57], [502, 57.4964], [502.423, 58], [503, 58.4437], [503.516, 59], [505, 59]
-Path 10: [485, 49], [484, 49], [483.552, 50], [483, 50.5266], [483, 52], [483, 53], [483, 54], [483, 55], [483, 56], [483, 57], [483, 58], [483, 59], [483, 60]
-Path 11: [507, 49], [507, 50], [508, 50], [509, 50], [510, 50], [511, 50], [512, 50], [513, 50.5154], [514, 51.3798], [514.522, 52], [515.124, 53], [516, 53]
-Path 12: [971, 56], [970, 57], [969, 57], [968, 57.3194], [967.37, 58], [966.245, 59], [965, 60], [964, 60.1443], [963.192, 61], [962, 61.2191], [961.287, 62], [960, 63], [959, 63.3283], [958.336, 64], [957.294, 65], [956.276, 66], [955, 66.4461], [954.493, 67], [954, 68], [954, 69], [953.319, 70], [954, 70]
-Path 13: [591, 55], [591.973, 55], [592, 56], [592.486, 57], [593, 58], [593, 59.4884], [593.541, 60], [594, 60.5082], [595, 61], [595.504, 62], [596.449, 63], [597, 63.5539], [597.563, 65], [598.464, 66], [599, 66.5251], [600, 67.4701], [600.483, 68], [601, 68.4728], [601.406, 69], [602, 69.4996], [602, 70], [602, 71], [602.605, 72], [603.435, 73], [604, 73.567], [604.542, 75], [605.486, 76], [606, 76.5382], [606.574, 78], [607.479, 79], [608, 79.5383], [608.583, 81], [609.575, 82], [610.502, 83], [611, 84], [611.506, 85], [612.457, 86], [613, 86.5307], [614, 87.5216], [615, 88.5089], [616, 89.507], [617, 90.4573], [617, 91]
-Path 14: [484, 64], [483, 64], [482, 64], [482, 65], [482, 66], [482, 67], [482, 68], [482, 69], [482.527, 70], [483, 71], [483.541, 72], [484.516, 73], [485.507, 74], [486.533, 75], [488, 75.5525], [489, 76.4689], [489.521, 77], [490.59, 78], [491.613, 79], [492.547, 80], [493.536, 81], [494.53, 82], [495.385, 83], [496, 83]
-Path 15: [707, 64], [707, 65], [708, 65.4538], [708.63, 66], [709.52, 67], [710.404, 68], [711, 68.5743], [712, 69.5566], [713, 70.528], [713.449, 72], [714, 72.5332], [714, 74], [714, 75], [714.485, 76], [715, 76.5332], [715, 78], [715.576, 79], [716.481, 80], [717, 80.5386], [718, 81.489], [718.457, 82], [719, 82.4006], [719.455, 83], [720, 83.3214], [720.522, 84], [722, 84.6336], [723, 85.5792], [724, 86.5779], [724.535, 88], [725.46, 89], [726, 89.5325], [727, 90.6372], [727.604, 92], [728.528, 93], [729, 94], [729.483, 95], [730, 95.4749], [730, 96], [730.484, 97], [731, 97.4849], [731.498, 98], [732, 98.5137], [733, 99.5066], [734, 100.518], [734.407, 102], [735, 102.556], [735.435, 104], [736, 104.453], [736.498, 105], [737, 105.577], [738, 106.589], [739, 107.52], [740, 108.522], [740.438, 110], [741, 110.511], [741.57, 112], [742.587, 113], [743.583, 114], [744.496, 115], [745, 115.528], [745.467, 117], [746, 117.496], [746, 118], [746.441, 119], [747, 119.532], [747.652, 121], [748.625, 122], [749.519, 123], [750, 124], [750.408, 125], [751, 125.511], [751, 127], [751.467, 128], [752, 128.55], [752.644, 130], [753.575, 131], [754, 132], [754.581, 133], [755, 134], [755.436, 135], [756, 135.525], [756, 137], [756.512, 138], [757.381, 139], [758, 139.574], [759, 140], [760, 140.646], [760.638, 142], [761, 143], [761, 144], [761, 145], [761.488, 146], [762, 146.525], [762, 148], [762.465, 149], [763, 149.348], [763, 150], [763, 151]
-Path 16: [672, 46], [671, 46], [670.443, 46], [670, 47], [670, 48], [670, 48.5163], [669.361, 49], [668.504, 50], [667.518, 51], [667, 51.5256], [666.5, 52], [666, 53.2553], [665, 54.305], [664, 55.3581], [663, 56.3897], [662, 57.422], [661, 58.4103], [660, 59.3781], [659, 60.3729], [658, 61.3878], [657, 62.3898], [656, 63.3312], [655, 64.3194], [654, 65.2902], [653, 66], [652, 66.4119], [651, 67.39], [650, 68.3058], [649, 69.2107], [648, 70.1546], [647, 71], [646, 71.3576], [645, 72.3707], [644, 73.269], [643, 74.1505], [642, 75], [641, 75.2232], [640, 76], [639, 77], [638, 77.1274], [637, 78.0313], [636, 79], [635, 79], [634.364, 80], [633.338, 81], [632.279, 82], [631.214, 83]
-Path 17: [930, 80], [929, 80], [928.063, 81], [927, 81.119], [926.169, 82], [925, 83], [924, 83.1902], [923.234, 84], [922.116, 85], [921, 85.226], [920.294, 86], [919.179, 87], [918, 87.3218], [917.372, 88], [916.319, 89], [915, 90], [914, 90], [913, 91]
-Path 18: [629, 84], [628, 85], [627, 85.3951], [626, 86], [625.345, 87], [624.279, 88], [623.199, 89], [622, 89.395], [621.445, 90], [620.422, 91], [620, 92]
-Path 19: [495, 87], [496, 87], [496, 88], [496, 89], [496, 90], [496.395, 91], [497, 91.6102], [497.59, 93], [499, 93.5676], [500, 94.5229], [501, 95.4706], [501.464, 96], [502, 96.4806], [502, 97], [502.345, 98], [503, 98], [504, 99], [505, 100], [506, 100]
-Path 20: [515, 92], [514, 92.4075], [513, 93], [512.551, 94], [512, 94.5286], [512, 96], [511.522, 97], [511, 97.5398], [510, 98.509], [509, 99.3715], [509, 100]
-Path 21: [908, 93], [907, 94], [906, 94], [905, 95], [904, 95], [903, 96], [902, 96], [901, 97], [900, 97.182], [899.275, 98], [898, 98.259], [897.304, 99], [896, 100], [895, 101], [894, 101], [893, 102], [892, 102.095], [891.158, 103], [890, 103.1], [889.155, 104], [888, 105]
-Path 22: [501, 103], [500, 103], [500, 104], [500, 105], [499.516, 106], [499, 106]
-Path 23: [881, 108], [880, 108], [879, 109], [878, 110], [877, 110], [876, 110.124], [875.18, 111]
-Path 24: [870, 113], [869, 114], [868, 114], [867.166, 115], [866, 115.255], [865.318, 116], [864, 117]
-Path 25: [862, 118], [861, 119], [860, 119], [859, 119.386], [858.375, 120], [857.34, 121], [856.205, 122], [855, 122.31], [854.376, 123], [853.077, 124], [852, 125], [851, 125], [850, 126], [849, 126.026], [848.025, 127], [847, 127.198], [846.254, 128], [845, 129], [844, 129], [843, 130], [842, 130], [841, 131], [840, 131.148], [839.149, 132], [838, 133], [837, 133], [836, 134], [835, 134.129], [834.206, 135], [833, 135.452], [832.362, 136], [831.039, 137], [830, 137], [829, 138], [828, 138], [827, 139], [826, 139], [825, 140], [824, 141], [823, 141], [822, 141.324], [821.306, 142], [820, 143], [819, 143]
-Path 26: [493, 123], [492, 123], [492, 124], [492, 125], [491.451, 126], [490.622, 127], [490, 127]
-Path 27: [485, 131], [484, 131], [484, 132], [484, 133.354], [484.592, 134], [485, 135], [486, 135]
-Path 28: [484, 140], [483, 140], [482, 140], [482, 141], [481.633, 142], [481, 142.468], [481, 143], [481, 144], [480.416, 145], [479.413, 146], [478.418, 147], [477.43, 148], [476.417, 149], [475.415, 150], [474.409, 151], [473.313, 152], [472.096, 153], [471, 153.199], [470.254, 154], [469.136, 155], [468.389, 156], [468, 157], [467.447, 158], [466.29, 159], [465.367, 160], [465, 161], [464.515, 162], [464, 162.439], [464, 163]
-Path 29: [431, 141], [431, 142], [432, 142.364], [432.329, 143], [433, 143.417], [433, 144]
-Path 30: [815, 145], [814, 145], [813, 145], [812.496, 146], [811.509, 147], [811, 147.506], [810, 148.401], [809.403, 149], [808.313, 150], [807.226, 151], [806, 151.43], [805.417, 152], [804.295, 153], [803, 154], [802, 154], [801, 155], [800, 155], [799, 156], [798, 156.03], [797.05, 157], [796, 157.262], [795.398, 158], [794.207, 159]
-Path 31: [763, 164], [763.678, 164], [764, 165.394], [765, 166], [766.49, 166], [767, 166.51], [768, 167], [768.599, 168]
-Path 32: [463, 170], [461.567, 170], [461, 171], [461, 172], [461, 172.536], [460, 173], [459.575, 174], [459, 174.572], [458.589, 176], [458, 176.501], [457.601, 178], [457, 178.488], [456.55, 179], [456, 179.343], [456, 180]
-Path 33: [768, 174], [767, 174], [766, 174], [766, 175], [765.575, 176], [765, 176.545], [764.442, 178], [764, 179], [764, 180], [763.524, 181], [763, 181.458], [763, 182], [763, 183], [763, 184], [763, 185], [763, 186], [762.543, 187], [762, 187.434], [762, 188], [762, 189], [762, 190], [762, 191], [762, 192], [762, 193]
-Path 34: [452, 183], [451, 183], [450, 183], [449.408, 184], [449, 185], [448.201, 186], [447, 186]
-Path 35: [805, 171], [805, 171.509], [805.642, 172], [806, 173.407], [806.727, 174], [807, 175], [807, 175.538], [807.552, 176], [808, 177.412], [809, 178.473], [809.502, 179], [810.414, 180], [811, 181], [811.477, 182], [812, 183], [812.501, 184], [813, 185], [813.528, 186], [814, 187], [814.585, 188], [815.443, 189], [816, 189.567], [816.515, 191], [817, 192], [817.583, 193], [818.447, 194], [819, 194.574], [820, 195.609], [820.594, 197], [821.463, 198], [822, 198.576], [822.444, 200], [823, 200.592], [823.477, 202], [824, 202.494], [824.4, 203], [825, 203.53], [826, 204.566], [826.566, 206], [827.574, 207], [828.537, 208], [829.443, 209], [830, 209.566], [830.572, 211], [831.443, 212], [832, 212.572], [832.447, 214], [833, 214.562], [833.55, 216], [834, 217], [834.56, 218], [835.406, 219], [836, 219.6], [836.513, 221], [837, 222], [837.548, 223], [838.373, 224], [839, 224.577], [839.604, 226], [840.498, 227], [841, 227.597], [841.483, 229], [842, 229.539], [842.532, 231], [843.371, 232], [844, 232.615], [844.503, 234], [845, 235], [845.634, 236], [846.416, 237], [847, 237.604], [847.47, 239], [848, 239.529], [848.577, 241], [849.485, 242], [850, 242.558], [850.54, 244], [851, 245], [851.528, 246], [852.371, 247], [853, 247.604], [853.518, 249], [854.427, 250], [855, 250.555], [855.463, 252], [856, 252.56], [856.41, 254], [857, 254.658], [857.564, 256], [858.486, 257], [859, 257.553], [859.506, 259], [860, 260], [860.588, 261], [861.45, 262], [862, 262.538], [863, 263.627], [863.555, 265], [864.478, 266], [865, 266.543], [865.574, 268], [866.464, 269], [867, 269.56], [868, 270.61], [868.506, 272], [869, 273], [869.575, 274], [870.417, 275], [871, 275.566], [871.586, 277], [872.478, 278], [873, 278.533], [874, 279.593], [874.525, 281], [875.398, 282], [876, 282.596], [876.494, 284], [877, 284.513], [878, 285.573], [878.525, 287], [879.393, 288], [880, 288.587], [880.476, 290], [881, 290.575], [882, 291.606], [882.563, 293], [883.469, 294], [884, 294.56], [884.498, 296], [885, 296.524], [885.584, 298], [886.47, 299], [887, 299.543], [888, 300.578], [888.575, 302], [889, 303], [889.56, 304], [890, 305], [890.515, 306], [891.37, 307], [892, 307.532], [892.547, 309], [893.515, 310], [894, 311], [894.582, 312], [895.484, 313], [896, 313.544], [897, 314.587], [897.56, 316], [898.394, 317], [899, 317.596], [899.4, 319], [900, 319.592], [900.475, 321], [901, 321.531], [902, 322.57], [902.607, 324], [903.512, 325], [904.378, 326], [905, 326.586], [905.466, 328], [906, 328.548], [907, 329.588], [907.587, 331], [908.506, 332], [909.393, 333], [910, 333.623], [910.529, 335], [911.458, 336], [912, 336.552], [913, 337.621], [913.629, 339], [914.552, 340], [915, 341], [915.586, 342], [916.42, 343], [917, 343.559], [917.585, 345], [918.553, 346], [919.459, 347], [920, 347.557], [920.474, 349], [921, 349.565], [921.518, 351], [922.485, 352], [923, 352.472], [923.495, 353], [924, 353.51], [925, 354.546], [926, 355.578], [926.421, 357], [927, 357.582], [927.402, 359], [928, 359.61], [928.423, 361], [929, 361.572], [929.45, 363], [930, 363.543], [930.481, 365], [931, 365.522], [932, 366.566], [932.553, 368], [933.357, 369], [934, 369.6], [934.514, 371], [935.354, 372], [936, 372.592], [936.451, 374], [937, 374.593], [937.46, 376], [938, 376.587], [938.464, 378], [939, 378.564], [939.375, 380], [940, 380.563], [940.324, 382], [941, 382.489], [941, 383]
-Path 36: [445, 189], [445.505, 190], [446, 191], [446, 192], [446, 193], [446, 194], [446, 195], [446, 196]
-Path 37: [762, 198.366], [761, 199.436], [760.488, 200], [760, 201], [760, 202], [760, 203], [760, 203.549], [759.419, 204], [759, 205], [759, 206], [759, 207], [759, 208], [759, 209], [759, 210], [759, 211]
-Path 38: [422, 207], [422.631, 207], [423, 208], [424, 208.534], [424, 210], [424.03, 211], [425, 211]
-Path 39: [433, 218], [432, 218], [431, 218], [430.445, 219], [429.578, 220], [429, 220.279], [429, 221]
-Path 40: [759, 218], [759, 219], [759, 220], [759, 221], [759, 222], [759, 223], [758.518, 224], [758, 224.473], [758, 225], [757.523, 226], [757, 226.61], [756.528, 228], [756, 228.521], [756, 230], [755.437, 231], [755, 232], [755, 233], [755, 234], [754.48, 235], [754, 236], [754, 237], [754, 238], [754, 239], [754, 240], [754, 241], [754, 242], [753.537, 243], [753, 243.526], [753, 245], [753, 246], [753, 247], [753, 248], [753, 249], [753, 250], [752.51, 251], [752, 251.517], [752, 253], [751.561, 254], [751, 254.547], [751, 256], [751, 257], [750.55, 258], [750, 258.48], [750, 259], [750, 260], [749.339, 261], [749, 262], [749, 263], [749, 264], [749, 265], [748.446, 266], [748, 267], [748, 268], [748, 269], [748, 270], [748, 271], [748, 272], [748, 273], [748, 274], [748, 275], [747.515, 276], [747, 276.499], [747, 277], [747, 278], [746.456, 279], [746, 280], [746, 281], [746, 282], [746, 283], [746, 284], [746, 285], [745.44, 286], [744.374, 287]
-Path 41: [422, 230], [421, 230], [420, 230], [420, 231], [420, 232]
-Path 42: [413, 239], [412, 239], [411, 239], [410, 239], [410, 240]
-Path 43: [407, 246], [407.314, 247], [408, 247.209], [408.441, 248], [409, 248]
-Path 44: [404, 260], [403, 260], [402, 260], [401.447, 261], [400.519, 262], [400, 262.54], [399, 263.56], [398.5, 265], [398, 266], [398, 267], [397.47, 268], [397, 269], [396.504, 270], [396, 270.357], [395.631, 271], [395, 271]
-Path 45: [378, 290], [377, 290], [376.42, 291], [376, 292], [376, 293], [376, 294], [375.654, 295], [375, 295]
-Path 46: [745, 289], [744.016, 289], [744, 289.55], [743, 290], [743, 291], [743, 292], [743, 293], [743, 294], [743, 295], [743, 296], [743, 297], [743, 298], [743, 299], [743, 300], [743, 301], [743, 302]
-Path 47: [743, 308], [742, 308], [741.49, 309], [741, 310], [741, 311], [741, 312], [741, 313], [741, 314], [740.314, 315], [740, 316], [739.336, 317], [739, 318], [739, 319], [739, 320], [739, 321], [738.488, 322], [738, 323], [738, 324], [738, 325], [738, 326], [738, 327], [738, 328], [738, 329], [738, 330], [738, 331], [738, 332]
-Path 48: [358, 317], [358.472, 318], [359, 318.322], [359, 319]
-Path 49: [351, 334], [350, 334], [350, 335], [350, 336], [350.524, 337], [351, 338], [351, 339]
-Path 50: [738, 340], [738, 341], [737.457, 342], [737, 343], [737, 344], [736.58, 345], [736, 345.429], [736, 346], [736, 347], [735.491, 348], [735, 349], [734.454, 350], [734, 351], [734, 352], [734, 353], [734, 354], [734, 355], [734, 356], [734, 357], [734, 358], [734, 359], [734, 360], [734, 361], [734, 362], [734, 363], [734, 364], [734, 365], [734, 366]
-Path 51: [336, 352], [336.451, 352.764], [337, 353.078], [337, 354]
-Path 52: [997, 362], [996, 362], [995, 362], [994.324, 363], [993.131, 364], [992, 365], [991, 365.221], [990.217, 366], [989, 366.382], [988.373, 367], [987.25, 368], [986, 369], [985, 369], [984, 370], [983, 370.013], [982.023, 371], [981, 372], [980, 372], [979, 373], [978, 373], [977, 374], [976, 374.024], [975.039, 375], [974, 375.029], [973.052, 376], [972, 377], [971, 377], [970, 378], [969, 378.056], [968.064, 379], [967, 379.225], [966.276, 380], [965, 381], [964, 381], [963, 382], [962, 382.151], [961.183, 383], [960, 384], [959, 384], [958, 385], [957, 385.157], [956.214, 386], [955, 387], [954, 387], [953, 388], [952, 388], [951, 389], [950, 389.023], [949.032, 390], [948, 390.025], [947.059, 391]
-Path 53: [337, 362], [336, 362.058], [335, 363], [334, 363], [333.219, 364], [332.131, 365], [332, 366], [332, 367], [332, 368], [332.497, 369], [333, 369.346], [333, 370]
-Path 54: [734, 372], [734, 373], [733.51, 374], [733, 374.494], [733, 375], [733, 376], [733, 377], [732.499, 378], [732, 379], [732, 380], [732, 381], [732, 382], [732, 383], [732, 384], [731.481, 385], [731, 386], [731, 387], [731, 388], [731, 389], [730.539, 390], [730, 390.528], [730, 392], [730, 393], [730, 394], [730, 395], [729.524, 396], [729, 396.507], [729, 398], [729, 399], [729, 400], [729, 401], [729, 402], [729, 403], [728.47, 404], [728, 405], [728, 406], [728, 407]
-Path 55: [321, 381], [320, 381], [320, 382], [320, 383], [320.475, 384], [321, 384.516], [321, 386], [321, 387]
-Path 56: [945, 392], [944, 393], [943, 394.196], [942, 395], [941, 395.398], [940, 396.215], [939.244, 397], [939, 398], [938, 399], [937, 399], [936, 400], [935, 400.227], [934, 401], [933, 402], [932, 402], [931, 403], [930, 403.275], [929, 404.204], [928, 405], [927, 405], [926.371, 406], [925.109, 407], [924, 408], [923, 408.079], [922.104, 409], [921, 409.379], [920.374, 410], [919.299, 411], [918, 412]
-Path 57: [727, 409], [728, 409], [728, 410], [728, 411], [728, 412], [728, 413], [728.336, 414], [729, 414]
-Path 58: [297, 415], [297.468, 416], [298, 416.466], [298, 417], [298.467, 418], [299, 418.341], [299, 419], [299, 420], [299, 421]
-Path 59: [728, 419], [728, 420], [728, 421], [728, 422], [728, 423]
-Path 60: [916, 413], [915, 414], [914, 414.101], [913, 415], [912, 416], [911, 416.242], [910, 417], [909, 417.294], [908, 418.145], [907, 419], [906, 419.374], [905, 420.266], [904, 421], [903, 421], [902.379, 422], [901.239, 423], [900, 424], [899, 424.239], [898.265, 425], [897.177, 426], [896, 426.314], [895.351, 427], [894.105, 428], [893, 428.205], [892.261, 429], [891.015, 430], [890, 430.331], [889.331, 431], [888.284, 432], [887, 432.405], [886.399, 433], [885.299, 434], [884.133, 435], [883, 435.399], [882.383, 436], [881.336, 437], [880, 437.427], [879.392, 438], [878.308, 439], [877.219, 440], [876, 440.42], [875.446, 441], [874.411, 442], [873.326, 443], [872, 444], [871, 444], [870, 445], [869, 445.202], [868.22, 446], [867, 446.448], [866.376, 447], [865.288, 448], [864, 449], [863, 449.346], [862.338, 450], [861.332, 451], [860.266, 452], [859, 453], [858, 453.292], [857.327, 454], [856.173, 455], [855, 455.372], [854.359, 456], [853.256, 457], [852, 457.3], [851.339, 458], [850, 459], [849, 459.192], [848.227, 460], [847, 460.41], [846.416, 461], [845.328, 462], [844.105, 463], [843, 463.103], [842.183, 464], [841, 465], [840, 466], [839, 466.385], [838.321, 467], [837, 467.476], [836.455, 468], [835.378, 469], [834.288, 470], [833, 470.496], [832.431, 471], [831.369, 472], [830.239, 473], [829, 474], [828, 474.051], [827.069, 475], [826, 476], [825, 476], [824, 477], [823, 477], [822, 478]
-Path 61: [728, 429], [727, 429], [727, 430], [727, 431], [727, 432], [727, 433], [727, 434], [727, 435], [727, 436], [727, 437], [727, 438], [727, 439]
-Path 62: [997, 444], [996, 444], [995, 444], [994.422, 445], [993.411, 446], [992.38, 447], [991.3, 448], [990, 448.498], [989.491, 449], [988.457, 450], [987.425, 451], [986.415, 452], [985.444, 453], [984.535, 454], [984, 454.549], [983, 455.6], [982.455, 457], [981.499, 458], [980.512, 459], [980, 459.466], [979.587, 460], [979, 460.538], [978.521, 462], [978, 462.48], [977.491, 463], [976.436, 464], [976, 465], [975.24, 466], [974, 466.311], [973.335, 467], [972.266, 468], [971.232, 469], [970, 469.438], [969.436, 470], [968.465, 471], [967.427, 472], [966.387, 473], [965.449, 474], [964.433, 475], [963.302, 476], [962.072, 477], [961, 478], [960, 478], [959, 479], [958, 479.172], [957.206, 480], [956, 480.387], [955.363, 481], [954.342, 482], [953.295, 483], [952.278, 484], [951, 484.412], [950.455, 485], [949.403, 486], [948.38, 487], [947.341, 488], [946.256, 489], [945.182, 490], [944, 490.381], [943.336, 491], [942.31, 492], [941.251, 493], [940, 493.371], [939.41, 494], [938.409, 495], [937.393, 496], [936.36, 497], [935.291, 498], [934.246, 499], [933.183, 500], [932, 501], [931, 502], [930, 502.269], [929.229, 503], [928.176, 504], [927, 504.409], [926.43, 505], [925.399, 506], [924.36, 507], [923.338, 508], [922.354, 509], [921, 509.383], [920.374, 510], [920, 511], [919, 512], [918, 512.115], [917.119, 513], [916.117, 514], [915, 514.311], [914.351, 515], [913.29, 516], [912.303, 517], [911, 517.435], [910.461, 518], [909.437, 519], [908.322, 520], [907.239, 521], [906.204, 522], [905, 522.391], [904.427, 523], [903.338, 524], [902.286, 525], [901.064, 526], [900, 526.371], [899.311, 527], [898.317, 528], [897, 528.457], [897, 529], [896.228, 530], [895, 530.334], [894.406, 531], [893.277, 532], [892.17, 533], [891, 534], [890, 535], [889, 535.394], [888.365, 536], [887.325, 537], [886.318, 538], [885.107, 539], [884, 540], [883, 541], [882, 541], [881, 541.4], [880.418, 542], [879.368, 543], [878.332, 544], [877, 544.569], [876, 545.575], [875, 546.505], [874.248, 548], [873, 548.442], [872.481, 549], [871.416, 550], [870.375, 551], [869.406, 552], [868.423, 553], [867.416, 554], [866.399, 555], [865.362, 556], [864.31, 557], [863.295, 558], [862.151, 559], [861, 559.332], [860.337, 560], [859.314, 561], [858.31, 562], [857, 562.384], [856.385, 563], [855.381, 564], [854.397, 565], [853.343, 566], [852.307, 567], [851.29, 568], [850, 568.48], [849.467, 569], [848.44, 570], [847.394, 571], [846.383, 572], [845.32, 573], [844.277, 574], [843.253, 575], [842, 575.435], [841.421, 576], [840.415, 577], [839.404, 578], [838.374, 579], [837.356, 580], [836.345, 581], [835.273, 582], [834.204, 583], [833, 583.382], [832.35, 584], [831.328, 585], [830.296, 586], [829.215, 587], [828, 587.331], [827.327, 588], [826.253, 589], [825.121, 590], [824, 590.323], [823.338, 591], [822.272, 592], [821, 592.496], [820.52, 593], [820, 593.514], [819, 594.484], [818.437, 595], [817.336, 596], [816.282, 597], [815.21, 598], [814, 598.317], [813.397, 599], [812.264, 600], [811, 601], [810, 602], [809, 602]
-Path 63: [275, 455], [275, 456], [275, 457], [275, 458]
-Path 64: [728, 469], [728, 469.715], [729, 470], [729, 471], [729.565, 472], [730.454, 473], [731, 473.472], [731.429, 474], [732, 474.431], [732.438, 475], [733, 475.536], [734, 476.628], [734.507, 478], [735.313, 479], [736, 479.066], [736, 480]
-Path 65: [721, 473.455], [720.483, 474], [720, 475], [720, 476.399], [719.428, 477], [719, 478], [718, 478]
-Path 66: [729, 487], [729, 488], [730, 488], [731, 488], [732, 488]
-Path 67: [715, 497], [714, 497], [714, 498], [713.476, 499], [712.491, 500], [711, 500.568], [710, 502], [709.022, 503], [708, 503.506], [707.501, 505], [707, 505.488], [707, 506], [707, 507], [706.459, 508], [705.556, 509], [705, 509.449], [704.523, 510], [704, 510.605], [703.46, 512], [703, 513], [703, 514], [703, 515], [702.473, 516], [702, 517], [701.597, 518], [701, 518.401], [700.562, 519], [700, 519.532], [699.412, 521], [699, 522], [698.445, 523], [698, 524]
-Path 68: [241, 503], [240, 503.405], [239, 504], [239, 505], [239, 506], [239, 507], [239.124, 508], [240, 508]
-Path 69: [228, 509], [229, 509.504], [230, 510], [231, 510]
-Path 70: [613, 516], [613.679, 517], [614.353, 518], [615, 518.682], [615.448, 520], [616, 520.439], [616.364, 521], [617, 521.464], [617, 522]
-Path 71: [233, 516], [232, 516.213], [231, 517], [230, 517], [230, 518], [230, 519]
-Path 72: [635, 519], [636, 519.308], [636.157, 520], [637, 520], [638, 520]
-Path 73: [225, 528], [225, 529], [225.353, 530], [226, 530.391], [226, 531]
-Path 74: [214, 543], [214.456, 544], [215, 544.527], [216, 545.439], [216, 546], [216.497, 547], [217, 547.52], [217.224, 549], [218, 549.177], [218, 550]
-Path 75: [695, 539], [694, 539], [693.456, 539], [693, 540], [693, 541], [693, 542], [692.515, 543], [692, 544], [692, 545], [692, 546], [692, 547], [691.555, 548], [691, 548.506], [691, 550], [691, 551], [691, 552], [691, 553], [691.527, 554]
-Path 76: [559, 557], [559, 558], [559.487, 559], [560, 559.546], [560.113, 561], [561, 561]
-Path 77: [208, 565], [208.47, 566], [209, 566.389], [209, 567], [209, 568]
-Path 78: [784, 583], [785, 583], [786, 583], [787, 583.415], [788, 584.483], [789, 585.448], [790, 586], [791.477, 586], [792, 586.534], [793, 587], [794, 587], [795, 587], [796, 587], [797.469, 587], [798.475, 588], [799, 589], [799.567, 590], [800, 591], [800.572, 592], [801.448, 593], [802, 593.611], [802.541, 595], [803.463, 596], [804, 596.54], [805, 597.532], [806, 598.538]
-Path 79: [780, 585], [779.489, 585], [779, 586], [779, 587], [779, 588], [779, 589], [778.507, 590], [778, 591], [777.58, 592], [777, 592.634], [776.418, 594], [775.491, 595], [774.519, 596], [774, 596.562], [773, 597.566], [772, 598.514], [771, 599.482], [771, 600], [770.462, 601], [769.484, 602], [768.471, 603], [767.447, 604], [766.46, 605], [765.492, 606], [764.507, 607], [764, 607.562], [763, 608.59], [762, 609.569], [761, 610.527], [760.342, 612], [759, 612.42], [758.429, 613], [757.356, 614], [756.075, 615]
-Path 80: [542, 598], [541, 598], [540, 598], [539.421, 599], [538.344, 600], [537.223, 601], [537, 602]
-Path 81: [546, 593], [546.431, 594], [547, 595.301], [548, 596.374], [548.614, 597], [549, 597.526], [549.502, 598], [550.386, 599], [551, 600.419], [552, 601], [552.498, 602], [553, 602.476], [553.377, 603], [554, 603.599], [554, 605], [554.48, 606], [555, 606.475], [555, 607], [555.651, 608], [556.542, 609], [557.464, 610], [558, 610.537], [559, 611.568], [559.608, 613], [560, 614], [560.584, 615], [561.548, 616], [562.521, 617], [563.515, 618], [564.398, 619], [565, 619.653], [565.543, 621], [566.464, 622], [567, 622.555], [568, 623.593], [568.652, 625], [569.591, 626], [570.501, 627], [571.369, 628], [572, 628.53], [572.662, 630], [574, 630.673], [575, 631.644], [575.205, 633], [576, 633]
-Path 82: [797, 599], [797, 600], [797, 601], [797.485, 602], [798, 602.57], [798.402, 604], [799, 604.616], [799.431, 606], [800, 606.637], [800.417, 608], [801, 608.635], [801, 610], [801.597, 611], [802, 612], [802.501, 613], [803, 614], [803.428, 615], [804, 615.618], [804, 617], [804.648, 618], [805, 619]
-Path 83: [713, 598], [713.515, 598], [714, 598.573], [714.596, 599], [715.454, 600], [716.287, 601], [717, 602], [717, 602.628], [718, 603], [718.454, 604], [719, 604.489], [719, 605], [719.418, 606], [720, 606], [721, 606], [722, 607], [722.571, 608], [724, 608.455], [724.468, 609], [725, 609.437], [725.588, 610], [727, 610.601], [728, 611], [729, 611.545], [730, 612], [731, 612], [732, 612.477], [732.471, 613], [733, 613.435], [733.497, 614], [734, 614.458], [734, 615]
-Path 84: [809, 604], [809, 605], [809.609, 606], [810, 607], [810.512, 608], [811, 609], [811.482, 610], [812, 610.546], [812.457, 612], [813, 612.562], [813.432, 614], [814, 614.584], [814, 616], [814.526, 617], [815, 618], [815.506, 619], [816, 620], [816.488, 621], [817, 621.571], [817.46, 623], [818, 623.606], [818, 625], [818.574, 626], [819, 627], [819.553, 628], [820, 629], [820.521, 630], [821, 631], [821.491, 632], [822, 632.571], [822.461, 634], [823, 634.562], [823.459, 636], [824, 636.566], [824.433, 638], [825, 638.552], [825.446, 640], [826, 640.568], [826.422, 642], [827, 642.592], [827.397, 644], [828, 644.586], [828, 646], [828.538, 647], [829, 648], [829.523, 649], [830, 650], [830.554, 651], [831, 652], [831.531, 653], [832.402, 654], [833, 654.583], [833.451, 656], [834, 656.598], [834.415, 658], [835, 658.543], [835.495, 660], [836, 660.558], [836.477, 662], [837, 662.571], [837.442, 664], [838, 664.521], [838.487, 666], [839, 666.514], [840, 667.561], [840.484, 669], [841, 669.493], [841, 670], [841, 671]
-Path 85: [789, 604], [788, 604], [787, 605], [786, 605], [785, 606], [784, 606], [783, 607], [782, 607], [781, 608], [780, 608], [779, 609], [778, 609]
-Path 86: [775, 609], [774, 609], [773, 610], [773, 611], [774, 612]
-Path 87: [535, 603], [534.268, 603], [534, 604.011], [533, 605], [532, 605.013], [531, 606.147], [530, 607.244], [529, 608], [528, 608.374], [527, 609.348], [526, 610.33], [525, 611.279], [524, 612.219], [523, 613.134], [522, 614], [521, 614], [520.305, 615], [519.28, 616], [518.285, 617], [517.249, 618], [516.241, 619], [515, 619.267], [514.312, 620], [513.253, 621], [513, 622], [512, 623], [511, 623.142], [510.15, 624], [509, 624.329], [508.341, 625], [507.313, 626], [506.348, 627], [505.314, 628], [504.316, 629], [503.244, 630], [502, 630.239], [501.265, 631], [500.196, 632], [499.238, 633], [498.222, 634], [497, 634.32], [496.331, 635], [495.302, 636], [494.239, 637], [493.159, 638], [492.142, 639], [491, 639.296], [490.277, 640], [489.248, 641], [488.147, 642], [487, 642.245], [486.324, 643], [485.263, 644], [484.218, 645], [483.167, 646], [482, 646.24], [481.409, 647], [480.32, 648], [479.275, 649], [478.295, 650], [477.194, 651], [476.098, 652], [475, 652.251], [474.262, 653], [473.193, 654], [472.158, 655], [471, 655.302], [470.32, 656], [469.331, 657], [468.338, 658], [467.253, 659], [466.195, 660], [465.108, 661], [464, 661.266], [463.248, 662], [462.248, 663], [461.222, 664], [460.159, 665], [459.159, 666], [458, 666.16], [457.235, 667], [456.18, 668], [455, 668.32], [454.304, 669], [453.274, 670], [452.211, 671], [451.227, 672], [450.17, 673], [449, 673.272], [448.385, 674], [447.34, 675], [446.347, 676], [445.151, 677], [444.127, 678], [443.067, 679], [442, 680], [441, 680.104], [440.153, 681], [439.088, 682], [438.037, 683], [437, 683.269], [436.267, 684], [435.232, 685], [434.088, 686], [433, 686.277], [432.335, 687], [431.268, 688], [430.199, 689], [429.154, 690], [428, 690.2], [427.217, 691], [426.14, 692], [425, 692.307], [424.532, 693], [424, 693.253], [423.485, 694], [423, 695], [422, 696], [421.104, 697], [420, 697], [419, 698]
-Path 88: [775, 616], [776, 617], [776.409, 618], [777, 618.57], [777.258, 620], [778, 620.605], [778, 622], [778.479, 623], [779, 623.608], [779.436, 625], [780, 625.622], [780, 627], [780.551, 628], [781, 629], [781.491, 630], [782, 630.459], [782, 631]
-Path 89: [750, 617], [750, 617.915], [751, 618], [751.544, 619], [752.545, 620], [754, 620.586], [755, 621.459], [755.54, 622], [757, 622.494], [757.475, 623], [758, 623], [759, 623.518], [760, 624], [761, 624]
-Path 90: [767, 619], [767, 619.815], [767.662, 620], [768, 620.539], [769, 621], [769.475, 622], [770, 622], [771, 622], [772, 622.755], [772.643, 624], [773.364, 625], [774, 625.623]
-Path 91: [806.094, 622], [807, 623], [807, 624], [807.645, 625], [808, 626], [808.611, 627], [809, 628], [809.533, 629], [810, 630], [810.409, 631], [811, 631.609], [811, 633], [811.658, 634], [812, 635], [812.621, 636], [813, 637]
-Path 92: [542, 621], [542, 621.502], [542.586, 622], [543, 623], [543, 623.551], [543.598, 624], [544, 625], [545, 625.42], [545.543, 626], [546, 627], [547, 628], [547.417, 629], [548, 629.582], [548.53, 631], [549, 632], [549.635, 633]
-Path 93: [540, 623], [539, 623], [538, 623.294], [537, 624.256], [536, 625.15], [535, 626], [534, 627], [533, 628], [532, 628], [531, 628], [530.31, 629], [530, 630], [529, 631], [528, 631.189], [527.223, 632], [526.167, 633], [525.152, 634], [524, 634.287], [523.289, 635], [522.252, 636], [521.223, 637], [520, 637.351], [519.406, 638], [518.372, 639], [518, 640], [517.152, 641], [516, 641.233], [515.319, 642], [514.286, 643], [513.104, 644], [512.132, 645], [511, 645.198], [511, 646]
-Path 94: [773, 629], [773, 630], [773.582, 631], [774, 632], [774.508, 633], [775, 634], [775.458, 635], [776, 635.569], [776, 637], [776, 638], [776.51, 639], [777, 640], [777.463, 641], [778, 641.436], [778.545, 642], [779.535, 643], [780, 644], [780, 645], [780.581, 646], [781, 647], [781.541, 648], [782, 649], [782.496, 650], [783, 650.575], [783.465, 652], [784, 652.578], [784, 654], [784.487, 655], [785, 655.478], [785, 656], [785.335, 657], [786, 657.494], [786, 658], [786, 659], [786.513, 660], [787, 661], [788, 662], [788, 663]
-Path 95: [535, 614], [533.579, 615], [532.582, 616], [531.513, 617], [531, 617.582], [530, 618.433], [529, 619.233], [527.621, 620], [526.583, 621], [525.552, 622], [525, 622.564], [524, 623.45], [523, 624.331], [521.683, 625], [520.578, 626], [519.592, 627], [519, 628], [518, 629], [517, 629.405], [515.65, 630], [514.593, 631], [513.614, 632], [513, 633], [512, 633.555], [511, 634.201], [511, 635]
-Path 96: [581, 634], [580, 634], [579.3, 635], [578, 635.216], [577.488, 636], [576, 637]
-Path 97: [784, 635], [784, 636], [784.545, 637], [785, 638], [785.475, 639], [786, 639.538], [786.498, 641], [787, 641.542], [787.481, 643], [788, 643.594], [788, 645], [788.583, 646], [789, 647], [789.508, 648], [790, 649]
-Path 98: [168, 638], [169, 638.61], [169.393, 640], [170, 640.502], [170.203, 642], [171, 642]
-Path 99: [814, 639], [814.261, 640], [815, 640.42], [815, 641], [815, 642], [815.538, 643], [816, 644], [816.598, 645], [817, 646], [817.575, 647], [818, 648], [818.463, 649], [819, 649.574], [819.471, 651], [820, 651.573], [820.458, 653], [821, 653.613], [821.502, 655], [822, 656], [823, 657], [823, 658], [824, 659], [824, 660], [824.396, 661], [825, 661.622], [825.391, 663], [826, 663.659], [826.496, 665], [827, 665.57], [827.468, 667], [828, 667.575], [828.43, 669], [829, 669.594], [829.488, 671], [830, 671.569], [830.507, 673], [831, 674], [831.56, 675], [832, 676], [832.505, 677], [833, 678], [833, 679], [833.814, 680]
-Path 100: [573, 640], [572, 640], [571.504, 641], [571, 641.323], [570.498, 642], [569.466, 643], [568.475, 644], [567.432, 645], [567, 646], [566.26, 647], [565.174, 648], [564, 648.349], [563.322, 649], [562.208, 650], [561, 650.318], [560.332, 651], [559.208, 652], [558, 652.501], [557, 653.464], [556.5, 654], [556, 654.408], [555.445, 655], [554.407, 656], [553.353, 657], [552.174, 658], [551, 658.281], [550.287, 659], [549, 660], [548, 660.292], [547.292, 661], [546, 661.509], [545, 662.506], [544, 663.502], [543, 664.514], [542, 665.533], [541, 666.552], [540, 667.586], [539.478, 669], [539, 670], [538.462, 671], [538, 672], [537.428, 673], [536.577, 674], [536, 674]
-Path 101: [171, 651], [170, 651], [169, 651.415], [169, 652], [169, 653], [168.07, 654], [168.049, 654.951], [168, 656], [168, 657], [168, 658]
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-Path 138: [448.464, 758], [449, 758.572], [449.646, 759], [450, 759.607], [450.586, 760], [451.412, 761], [452, 762.367], [453, 763], [454, 763], [455.073, 764], [456, 765.275], [456.849, 766], [457, 767], [457.489, 768], [458, 768.576], [459, 769.559], [460, 770.541], [461, 771.633], [461, 773]
-Path 139: [443, 775], [442, 775.469], [441.423, 776], [440, 776.653], [439, 777.579], [438, 778.496], [437.44, 779], [436.429, 780], [435, 780.638], [434, 781.654], [433, 782.553], [432, 784]
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-Path 141: [689, 772], [688, 772.174], [687, 773], [686, 773.317], [685, 774.289], [684, 775.311], [683, 776], [682.285, 777], [681.309, 778], [680, 778.568], [679.445, 780], [678.42, 781], [677.368, 782], [676.358, 783], [675.357, 784], [674.343, 785], [673.328, 786], [672, 786.277], [671.364, 787], [670.022, 788], [669, 789], [668, 789], [667, 790], [666, 791], [665, 792], [664, 792], [663, 792.275], [662.273, 793], [661.298, 794], [660, 794.489], [659.491, 795], [658.513, 796], [658, 796.54], [657, 797.497], [656.566, 798], [656, 798.45], [655.516, 799], [655, 799.342], [655, 800], [654, 801]
-Path 142: [831, 762], [831, 763], [831, 764.363], [831.568, 765], [832, 765.516], [833, 766], [833.699, 766], [834.444, 767], [835, 768], [835, 769], [835, 770.417], [835.539, 771], [836, 772.432], [837, 773.435], [838.312, 774], [839, 774.898], [839.669, 775], [840, 776], [840.359, 777], [841, 777]
-Path 143: [550, 778], [549, 778], [548.537, 779], [548, 779.554], [547, 780.541], [546, 781.578], [545, 782.644], [544, 783.573], [543, 784.572], [542, 785.524], [541, 786.51], [540, 787.479], [539.406, 788], [539, 789]
-Path 144: [523, 774], [522, 774], [521.36, 774], [521, 775], [520, 776], [519, 777], [518, 778], [517, 778], [516, 778.3], [515, 779], [514.268, 780], [513.272, 781], [512.292, 782], [511, 782.362], [511, 783], [510.175, 784], [509.15, 785], [508, 785.072], [507.381, 786], [506, 786]
-Path 145: [464, 781], [463, 781], [462, 781], [462, 782], [461.426, 783], [461, 784], [461, 785], [461, 786], [461, 787], [461, 788], [461, 789], [461.557, 790], [462.496, 791], [463, 791], [464, 791], [465, 791.545], [466, 792], [467, 792.598], [468, 793], [469, 793]
-Path 146: [116, 782], [116.564, 783], [117.382, 784], [118, 784.55], [119, 785], [120, 785.528], [121, 786.492], [121.19, 787], [122, 787]
-Path 147: [497, 778], [497.642, 778], [498, 778.62], [498.546, 779], [499.406, 780], [500, 781.498], [501, 782], [501.611, 783], [502.602, 784], [503.503, 785], [505, 785.249], [505.331, 786], [506, 786]
-Path 148: [752, 778], [751, 778.348], [750, 779.139], [749, 780], [748, 780.392], [747, 781.365], [746, 782], [745, 782], [744.472, 783], [743.421, 784], [742.343, 785], [741.278, 786], [740, 786.495], [739.505, 787], [739, 787.49], [738.475, 788], [737.43, 789], [736.35, 790], [735.286, 791], [734.22, 792], [733, 792.481], [732.468, 793], [731.457, 794], [730.424, 795], [729.349, 796], [728, 797], [727, 797], [726, 798], [725, 799], [724, 799.157], [723.064, 800], [722, 800.689], [721, 801.646], [720, 802.607], [719, 803.585], [718, 804.517], [717, 805.403], [716.399, 806], [715.307, 807], [714.263, 808], [713, 808.427], [712.414, 809], [711.36, 810], [710.24, 811], [709, 811.387], [708.369, 812], [707.317, 813], [706, 813.549], [705, 814.521], [704, 815.491], [703.604, 816], [703, 816.504], [702, 817.614], [701, 818.527], [700, 819.001], [699.001, 820], [698, 821], [697, 822], [696, 822.45], [695.404, 823], [694.338, 824], [693.147, 825]
-Path 149: [410, 782], [409, 782], [408.497, 782], [408, 782.627], [407, 783], [406.507, 784], [406, 784.528], [405, 785.405], [404.421, 786], [403.315, 787], [402.166, 788], [401.1, 789], [400, 789.42], [399.476, 790], [398.426, 791], [397.355, 792], [396.255, 793], [395.22, 794], [394, 794.481], [393.463, 795], [392.411, 796], [391.426, 797], [390.491, 798], [389.498, 799], [388.485, 800], [387.328, 801], [386, 802], [385, 803], [384, 804], [383, 805], [382, 805.355], [381.363, 806], [380.35, 807], [379.239, 808], [378.168, 809], [377, 810], [376, 810.037], [375.055, 811], [374, 812], [373, 812.25], [372.227, 813], [371, 813.526], [370, 814.491], [369.479, 815], [368.439, 816], [367.418, 817], [366.359, 818], [365.317, 819], [364, 819.38], [363.469, 820], [362.231, 821]
-Path 150: [911, 781], [910, 782], [909, 782], [908, 783], [907, 784], [906, 784], [905.126, 785], [904.046, 786], [903, 786.135], [902.187, 787], [901.044, 788], [900, 788.094], [899.152, 789], [898, 790], [897, 790.037], [896.067, 791], [895, 791.121], [894.186, 792], [893, 793], [892, 793], [891, 794], [890, 794], [889, 795], [888, 795], [887, 796], [886, 796], [885, 797], [884, 797], [883, 798], [882, 798], [881, 799]
-Path 151: [430, 785], [429, 786], [428, 786.476], [427, 787], [426.363, 788], [425, 788.583], [424, 789.499], [423.493, 790], [422.453, 791], [421.575, 792], [421, 792]
-Path 152: [494, 783], [493, 783.477], [492.47, 784], [492, 785.436], [491.445, 786], [491, 787], [491, 788], [490.531, 789], [490, 790], [489.514, 791], [489, 791.604], [488, 792.591], [487, 793.499], [487, 794], [486.167, 795], [485, 796], [484, 796], [483, 797], [482, 797]
-Path 153: [532, 796], [531, 796], [530, 796], [529.408, 797], [528.094, 798], [527, 799], [526, 799], [525, 799.643], [524, 800.568], [523, 801.397], [522.459, 802], [521, 803], [520, 804], [519, 805], [518, 805.511], [517, 806]
-Path 154: [957, 797], [956, 797], [955, 797], [954.453, 798], [953.482, 799], [952.492, 800], [951.529, 801], [951, 801.523], [950, 802.552], [949.461, 804], [948, 804.424], [948, 805], [947, 806], [946, 807], [945, 808]
-Path 155: [502, 798], [503, 798], [504, 798.607], [504.6, 800], [505.557, 801], [506.456, 802], [507, 802.451], [507, 803], [507.514, 804], [509, 804.334], [509, 805]
-Path 156: [748, 797], [748, 798], [748, 799], [748, 800], [748.549, 801], [749, 802], [749.333, 803], [750, 803]
-Path 157: [107, 801], [107, 802], [107.534, 803], [109, 803.378], [109.436, 804], [110, 804]
-Path 158: [550, 800], [549, 800.243], [548, 801.131], [547, 802], [546, 803], [545, 803], [544, 804], [543, 804], [542, 805], [541, 806], [540, 806.278], [539, 807], [538, 807], [537.46, 808], [536.47, 809], [535.473, 810], [534.44, 811], [533.425, 812], [532.405, 813], [531.413, 814], [530.447, 815], [529.511, 816], [529, 816.465], [528.541, 817], [528, 817.51], [527, 818.485], [527, 819], [526.296, 820], [525, 820.438], [524.442, 821], [523.377, 822], [522, 823]
-Path 159: [652, 802], [651, 802.258], [650, 803], [649, 803.44], [648, 804.393], [647, 805.405], [646, 806.426], [645, 807], [644, 807.57], [643.37, 809], [642.308, 810], [641, 810.377], [640.451, 811], [639.396, 812], [638.403, 813], [637.512, 814], [637, 814.538], [636, 815.566], [635.439, 817], [634.5, 818], [633.477, 819], [632.406, 820], [631, 821]
-Path 160: [866, 806], [866, 806.681], [867, 807], [867, 808], [867.5, 809], [868, 809], [869, 809.597], [870, 810]
-Path 161: [226, 805], [225, 805], [224.473, 805], [224, 806], [223.558, 807], [223, 808], [223, 809], [223, 810], [223, 811], [223, 812], [223, 813], [223, 814]
-Path 162: [110, 810], [110, 811], [110.522, 812], [112, 812.323], [112.282, 813], [113, 813]
-Path 163: [416, 811], [415, 811], [414, 811], [413.444, 812], [412.398, 813], [411.401, 814], [411, 815]
-Path 164: [482, 810], [482, 811], [482, 812], [483, 812.636], [483.529, 814], [484.425, 815], [485, 815.538], [486, 816.536], [487, 817.522], [488, 818.579], [489, 819.714], [490, 820.699], [490.409, 822], [491, 822.617], [491.603, 824], [492.489, 825], [493, 825.567], [493.617, 827], [494.463, 828], [495, 828.52], [495, 830]
-Path 165: [716, 813], [716, 814], [716, 815], [716.534, 816], [717, 817], [717.486, 818], [718, 818.363], [718.478, 819], [719, 819], [720, 819], [721, 820], [721.361, 821], [722, 821]
-Path 166: [918, 813], [917.599, 814], [917, 814.472], [916.522, 815], [916, 815.635], [915, 816.484], [914.404, 817], [913.404, 818], [912.325, 819], [911.291, 820], [910, 820.568], [909, 821.538], [908, 822.523], [907, 823.468], [906.451, 824], [905.411, 825], [904.389, 826], [903, 826.583], [902, 827.551], [901, 828.559], [900, 829.487], [899.454, 830], [898.406, 831], [897, 831.626], [896.294, 833], [895, 833.506], [894, 834.5], [893, 835.424], [892.478, 836], [891.305, 837], [890, 838], [889.014, 839], [888, 839.421], [887.449, 840], [887, 841]
-Path 167: [338, 815], [339, 815.481], [339, 816], [339, 817]
-Path 168: [939, 811], [937.527, 811], [936.559, 812], [936, 813.424], [935, 814.453], [934, 815], [933.365, 816], [932.332, 817], [931.298, 818], [930, 818.432], [929.425, 819], [928.451, 820], [927.434, 821], [926.352, 822], [925.295, 823], [924.118, 824], [923, 824.324], [922.308, 825], [921.251, 826], [920, 826.364], [919.359, 827], [918.314, 828], [917.266, 829], [916, 829.443], [915.438, 830], [914.394, 831], [913.375, 832], [912.348, 833], [911.295, 834], [910, 834.439], [909.506, 835], [909, 835.43], [908.428, 836], [907.378, 837], [906.336, 838], [905.253, 839], [904, 839.436], [903.43, 840], [902.409, 841], [901.389, 842], [900.334, 843], [899.206, 844], [898, 844.288], [897.307, 845], [896.199, 846], [895, 846.324], [894.41, 847], [893.354, 848], [892.193, 849], [891.183, 850], [890, 850.428], [889.425, 851], [888.414, 852], [887.392, 853], [886.337, 854], [885.265, 855], [884, 855.41], [883.413, 856], [882.403, 857], [881.374, 858], [880.324, 859], [879.268, 860], [878, 860.43], [877.432, 861], [876.41, 862], [875.376, 863], [874.334, 864], [873.288, 865], [872, 865.412], [871.423, 866], [870.397, 867], [869.425, 868], [869, 869]
-Path 169: [345, 816], [345.578, 817], [346.49, 818], [347, 818]
-Path 170: [354, 818], [353, 818], [352, 818], [351.706, 819], [351, 819.629], [350.316, 821], [349.233, 822], [348.225, 823], [347, 824], [346.382, 825], [346, 826], [346, 827], [345.717, 828], [347, 828]
-Path 171: [313, 820], [312, 820], [311, 820], [310.181, 821], [309, 822], [308, 822.177], [307.164, 823], [306, 823.474], [305.396, 824], [304.131, 825], [303, 826], [302, 826]
-Path 172: [321, 817], [321.471, 818], [322.493, 819], [323.489, 820], [324.455, 821], [325, 822], [325.611, 823], [326.5, 824], [327, 824.504], [328, 825.568]
-Path 173: [442, 821], [441, 821.051], [440, 822], [439, 822], [438.277, 823], [437.242, 824], [436.156, 825], [435.045, 826], [434, 826.245], [433.239, 827], [432.232, 828], [431, 828.339], [430.352, 829], [429.333, 830], [428.289, 831], [427.255, 832], [426.252, 833], [425, 833.374], [424.357, 834], [423.322, 835], [422.289, 836], [421.27, 837], [420.257, 838], [419.215, 839], [418, 839.309], [417.331, 840], [416.301, 841], [415.273, 842], [414.211, 843], [413.181, 844], [412, 844.325], [411.319, 845], [410.312, 846], [409.267, 847], [408.225, 848], [407.175, 849], [406, 849.331], [405.326, 850], [404.313, 851], [403.28, 852], [402.212, 853], [401.133, 854], [400, 854.25], [399.318, 855], [398.263, 856], [397.245, 857], [396.233, 858], [395, 858.323], [394.324, 859], [393.303, 860], [392.264, 861], [391.235, 862], [390.195, 863], [389.142, 864], [388, 864.1], [387.237, 865], [386, 866]
-Path 174: [445, 818.382], [445.614, 819], [446.486, 820], [447, 821.392], [448, 822], [448, 823]
-Path 175: [380, 820], [380, 821], [380, 821.533], [381, 822.463], [382, 823], [382, 824], [382.624, 825], [383, 826], [383, 827], [383, 828], [383, 829], [383, 830]
-Path 176: [626, 823], [625, 823], [624, 823], [623.383, 824], [622.412, 825], [621, 825.537], [620, 826.564], [619.423, 828], [618.399, 829], [617.346, 830], [616.136, 831], [615, 831], [614, 832], [613, 833], [612, 833], [611, 833.326], [610.351, 834], [609.283, 835], [608, 835.437], [607.505, 836], [607, 836.435], [606.483, 837], [605.488, 838], [604.513, 839], [604, 839.456], [603.505, 840], [603, 840.444], [602.475, 841], [601.448, 842], [600.422, 843], [599.429, 844], [598.589, 845], [598, 845.504], [597.547, 847], [597, 847.55], [597, 849], [596.675, 850], [596, 850]
-Path 177: [104, 825], [105, 825.434], [105.304, 826], [106, 826.404], [106, 827], [106, 828], [106.368, 829], [107, 829], [108, 829.387], [108.488, 830], [109, 830], [110, 830]
-Path 178: [456, 829], [456.401, 830], [457, 830], [458, 830], [459, 830]
-Path 179: [182, 826], [182, 826.528], [182.53, 827], [183, 828], [183, 829], [183, 829.531], [183.723, 830], [184, 831], [185, 831.498], [185.514, 832], [186.087, 833], [187, 833]
-Path 180: [269, 832], [269, 832.563], [270, 833], [270.619, 834], [271.448, 835], [272, 835.225], [272.329, 836], [273, 836.223], [273.55, 837]
-Path 181: [99, 835], [98, 835], [97, 835], [97, 836], [97, 837], [96.5831, 838], [96, 838.602], [96, 840], [96, 841], [96.4016, 842], [97, 842.592], [97.4843, 844], [98, 844.52], [98, 846]
-Path 182: [372, 833], [372, 834], [372, 835], [373, 835.565], [374, 836], [375, 837], [375, 838], [375.545, 839], [376, 840], [376.544, 841], [377.422, 842], [378, 842.453], [378.375, 843], [379, 843.559], [379, 845]
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-Path 308: [665, 940], [665, 941], [665, 942.435], [665.773, 943], [666, 944], [666.552, 945], [667, 946], [667.562, 947], [668.501, 948], [669.488, 949], [670, 949.442], [670.38, 950], [671, 950], [672, 950]
-Path 309: [563, 944], [563, 945], [563.443, 946], [564, 946.583], [564, 948]
-Path 310: [546, 946], [545, 946], [544, 947], [543, 947], [542, 948], [541, 948.274], [540.266, 949], [539, 949.527], [538, 950.524], [537, 951.459], [536.349, 952], [535.3, 953], [534.275, 954], [533, 954.318], [532.599, 955], [532, 955.347], [531.659, 956], [531, 956.467], [531, 957], [530.277, 958], [529.258, 959], [528, 959.57], [527, 960.068], [527, 961]
-Path 311: [212, 947], [213, 947], [214, 947.425], [214.571, 948], [216, 949], [217, 949.523], [218, 950.423], [218, 951]
-Path 312: [835, 947], [834, 947], [833, 947], [832.291, 948], [831.25, 949], [830.204, 950], [829.029, 951], [828, 951.263], [827.29, 952], [826.251, 953]
-Path 313: [383, 947], [383, 948], [383.593, 949], [384.435, 950], [385, 950], [386, 950]
-Path 314: [678, 948], [677, 948], [676, 948], [675.403, 949], [675, 950]
-Path 315: [853, 947], [853, 948], [854, 948.537], [854.567, 950], [855, 951], [855.571, 952], [856.533, 953], [857.587, 954], [859, 954.527], [859.502, 956], [860, 957], [860.499, 958], [861, 958.421], [861.549, 959], [862.584, 960], [863.428, 961], [864, 961.569], [864.525, 963], [865.125, 964], [866, 964]
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-Path 317: [509, 940], [509, 940.822], [510, 941], [511, 941.497], [512.442, 942], [513.379, 943], [514, 943.636], [515, 944.423], [516, 945.425], [517.445, 946], [518, 946.68], [519, 947.393], [520, 948], [520.516, 948], [521, 948.525], [522, 949], [522.599, 950], [524, 950.484], [524.451, 951], [525, 951.452], [525.435, 952], [526, 952.436], [526, 953], [526.431, 954], [527, 954.284], [527.555, 955]
-Path 318: [671, 933], [670, 933.023], [669, 934], [668, 934.434], [666.545, 935], [666, 935.51], [665, 936.4], [664, 937.179], [663, 938.054], [662, 939], [661, 940], [660, 940.409], [659, 941.012], [658, 942], [657, 943], [656, 944], [655, 944], [654, 945], [653, 945.033], [652, 946], [651, 946.246], [650, 947.169], [649, 948], [648.479, 948], [648, 948.547], [647.498, 949], [647, 949.584], [646.442, 950], [646, 950.537], [645, 951], [644.353, 952], [643, 952.57], [642, 953.584], [641, 954.556], [640, 955.547], [639, 956]
-Path 319: [728, 949], [726.502, 949], [725.512, 950], [725, 950.571], [724, 951], [723.457, 952], [722.319, 953], [721, 954], [720, 954], [719, 955], [718, 955.381], [717.314, 956], [716, 956.507], [715, 957.311], [714.383, 958], [713, 959], [712, 960], [711, 960], [710, 960.268], [709.302, 961], [708, 962], [707, 962], [706, 963], [705, 963], [704, 964], [703, 964], [702, 965], [701, 965.327], [700.336, 966], [699.303, 967], [698.163, 968], [697.239, 969], [696.49, 970], [695.621, 971], [695, 971.518], [694.458, 973]
-Path 320: [819, 950], [819, 950.893], [818, 951], [817, 951], [816, 952]
-Path 321: [207, 954], [207, 955], [207, 956], [208, 957], [208, 958]
-Path 322: [824, 954], [823.302, 955], [822, 955.465], [821.521, 956], [821, 956.425], [820.51, 957], [820, 957.402], [819.454, 958], [818.341, 959], [818, 960], [817, 961], [816, 961.241], [815.253, 962], [814.195, 963], [813, 963.37], [812.474, 964], [811.64, 965], [811, 965.616], [811, 967], [812, 967.773], [813, 968.827], [813.528, 970], [814.424, 971], [815, 971.581], [815.575, 973], [816.453, 974], [817, 974.578], [817.55, 976], [818.44, 977], [819, 977.545], [819.611, 979], [820.413, 980], [821, 980.544], [821.595, 982], [822.507, 983], [824, 983.912], [824.506, 985], [825.415, 986], [826, 986.572], [826.59, 988], [827.51, 989], [828.468, 990], [829, 990.551], [830, 991.61], [830.586, 993], [831.5, 994], [832, 994.492], [832.448, 995], [833, 995.535], [834, 996.553], [835, 997.538], [835, 999]
-Path 323: [263, 955], [264, 955.631], [265, 956.551], [266, 957.414], [266.626, 958], [267, 959]
-Path 324: [312, 955], [311, 955], [311, 956], [311, 957], [311.357, 958], [312, 958.314], [312.472, 959], [313, 959], [314, 959.467], [314.372, 960], [315, 960]
-Path 325: [200, 953], [199.401, 953], [199, 953.598], [198.365, 954], [198, 954.529], [197.385, 955], [196.508, 956], [196, 957], [195.498, 958], [194.524, 959], [194, 959.403], [193.417, 960], [192.386, 961], [191.534, 962], [191, 962.393], [190.397, 963], [189, 963.35], [189, 964], [188, 965], [187, 965]
-Path 326: [271, 957], [271, 958], [271.497, 959], [272, 959.561], [273, 960.548], [274, 961.473], [274.434, 962], [275, 962.349], [275.637, 963], [276.559, 964], [277, 965]
-Path 327: [774, 956], [773, 957], [772, 957.391], [771, 958], [770.378, 959], [769, 959.452], [769, 960], [768, 961], [767, 962], [766.259, 963], [765.449, 964], [764.488, 965], [763.5, 966], [763, 966.411], [762.455, 967], [761.389, 968], [760.386, 969], [759, 969.465], [758.428, 970], [757.351, 971], [756.294, 972], [755, 972.482], [754.478, 973], [753.42, 974], [752.332, 975], [751, 975.434], [750.47, 976], [749.429, 977], [748.356, 978], [747.271, 979], [746, 979.454], [745.439, 980], [744.379, 981], [743.345, 982], [742, 982.516], [741, 983.524], [740, 984.492], [739.472, 985], [738.395, 986], [737.05, 987], [736, 987.305], [735.322, 988], [734.292, 989], [733, 989.039], [732.091, 990], [731, 991], [730, 991.374], [730, 992], [729.842, 993], [729, 993], [728, 993.704], [727.253, 995], [726.303, 996], [725, 996.271], [725, 997]
-Path 328: [563, 953], [562, 953], [561, 953.391], [560.455, 954], [559.502, 955], [558.569, 956], [557.554, 957], [557, 957.522], [556, 958.399], [555, 959], [554.259, 960], [553, 960.455], [552.492, 961], [551.484, 962], [550.474, 963], [549.42, 964], [548, 964.517], [547, 965.299], [546.225, 966], [545, 966.467], [544.43, 967], [543.297, 968], [542.304, 969], [541, 969.51], [540.497, 971], [539.471, 972], [539, 973], [538, 974], [537, 975], [536, 976], [535, 976], [534, 976.54], [533, 977.562], [532, 978.539], [531, 979.483], [530.509, 980], [530, 980.438], [529.479, 981], [528.391, 982], [527.229, 983]
-Path 329: [641, 958], [641, 959], [641, 960], [641.544, 961], [642.42, 962], [643, 962.406], [643, 963], [643.504, 964], [644, 965], [644.265, 966], [645, 966]
-Path 330: [50, 960], [51, 960.497], [51, 961], [51, 962], [51, 963]
-Path 331: [254.042, 960], [255, 961], [255.621, 962], [256.146, 963], [257, 963]
-Path 332: [630, 961], [629, 962], [628, 963], [627, 963], [626, 964], [625, 965], [624, 966], [623, 966]
-Path 333: [683, 962], [682, 962], [681.277, 963], [680, 963.249], [679.301, 964], [678.192, 965], [677.105, 966], [676, 966.31], [675.3, 967], [674.25, 968], [673.173, 969], [672.127, 970], [671, 970.261], [670.283, 971], [669.201, 972], [668.141, 973], [667, 973.315], [666.33, 974], [665.259, 975], [664.169, 976], [663.055, 977], [662, 977.068], [661.083, 978], [660, 979], [659, 979.13], [658.149, 980], [657, 981], [656, 981.001], [655.002, 982], [654, 982.207], [653.252, 983], [652.16, 984], [651, 984.432], [650.45, 985], [649.441, 986], [648.443, 987], [647.481, 988], [646.498, 989], [645.432, 990], [645, 991], [644.016, 992], [643, 992.326], [642.321, 993], [641.399, 994], [640.405, 995], [639.436, 996], [638.537, 997], [638, 997.547], [638, 999]
-Path 334: [397, 957], [395.591, 957], [394.509, 958], [394, 958.51], [393, 959.441], [392, 960.392], [391, 961.479], [390, 962.496], [389, 963], [388.415, 964], [387.32, 965], [386.248, 966], [385, 966.476], [384.5, 967], [384, 967.441], [383.479, 968], [382.429, 969], [381.334, 970], [380, 971], [379, 971], [378, 972], [377, 973], [376, 973.601], [375, 974.562], [374, 975.487], [373.424, 976], [372, 976.619], [371, 977.6], [370, 978.587], [369, 979.546], [368, 980.479], [367.456, 981], [366.406, 982], [365.377, 983], [364, 983.519], [363, 984.478], [362.479, 985], [361.441, 986], [360.423, 987], [359.473, 988], [358.559, 989], [358, 989.576], [357, 990]
-Path 335: [316, 964], [315, 964], [314, 964], [313.583, 965], [313, 965]
-Path 336: [205, 965], [204, 965], [203.417, 966], [202.138, 967], [201, 968], [200, 969], [199, 970], [198, 970], [197, 970.404], [196.41, 971], [195, 971.505], [194, 973], [193.303, 974], [193, 975], [193, 976]
-Path 337: [272, 966], [272.712, 967], [273.396, 968], [274, 968.496], [274, 969], [274, 970]
-Path 338: [51, 965], [51.4704, 966], [52, 967], [52, 968], [52, 969], [52, 970], [52.4132, 971], [53, 971.429], [53.5542, 972], [55, 972], [56, 972.519]
-Path 339: [288, 966], [288, 966.596], [289, 967], [289.662, 968], [290.511, 969], [291.36, 970], [292, 970.299], [292.319, 971], [293, 971.445], [293, 972], [293.56, 973], [294.632, 974], [296, 974.543], [297, 975.556], [298, 976.537], [298.629, 978], [299.651, 979], [300.633, 980], [301, 981]
-Path 340: [887, 967], [887, 968], [888, 968.436], [888.455, 969], [889, 969]
-Path 341: [318, 970], [318.383, 971], [319, 971.546], [320, 972.54], [321, 973], [322, 973], [323, 973.268], [323.354, 974], [324, 974.249], [324, 975]
-Path 342: [902, 968], [902.476, 969], [903.431, 970], [904, 971], [905, 971.594], [906, 972.564], [907, 973.531], [908, 974.487], [908.494, 975], [909, 975.476], [909.538, 976], [910.553, 977], [911.563, 978], [912.576, 979], [913.574, 980], [914.579, 981], [915.601, 982], [916.582, 983], [917.551, 984], [918.53, 985], [920, 985.871], [921, 987], [921, 988], [921.055, 989], [922, 990]
-Path 343: [865, 969], [865.416, 970], [866.467, 971], [867.48, 972], [868, 973], [868, 973.505], [869, 974]
-Path 344: [587, 972], [586.205, 972], [586, 973.037], [585, 974], [584, 975], [583, 975], [582.115, 976], [581, 976.366], [581, 977], [580.464, 978], [579.507, 979], [579, 979.51], [578, 980]
-Path 345: [805, 970], [804, 970.457], [803.355, 971], [803, 972.317], [802, 973.296], [801.335, 974], [801, 975], [800, 976], [799, 976], [798, 976], [797.248, 977], [796.233, 978], [795.224, 979], [794, 979.328], [794, 980], [793.109, 981], [792, 981.221], [792, 982], [791, 983], [790, 983], [789, 984], [788, 984], [787, 985], [786.219, 986], [785.189, 987], [784.184, 988], [783, 988.292], [782.382, 989], [781.338, 990], [780.295, 991], [779.226, 992], [778.209, 993], [777, 994], [776, 995]
-Path 346: [165, 977], [164, 977], [163.386, 978], [162.426, 979], [161.495, 980], [160.583, 981], [160, 981.608], [159, 982.587], [158, 983.579], [157.344, 985], [156.009, 986], [155, 986]
-Path 347: [253, 977], [254, 977.54], [255, 978.611], [256, 979.525], [257, 980], [258, 980.581], [259, 981.396], [259.223, 982], [260, 982]
-Path 348: [227, 978], [227, 979], [228, 979.62], [229, 980.633], [229.551, 982], [230.44, 983], [231, 983.337], [231, 984]
-Path 349: [527, 977], [526, 978], [525, 979], [524, 979], [524, 980], [524, 981], [524, 982]
-Path 350: [683, 979], [682, 979], [681.023, 980], [680, 980.166], [679.22, 981], [678, 982], [677, 982.199], [676.217, 983], [675, 983.397], [674.405, 984], [673.341, 985], [672.219, 986], [671, 986.267], [670.297, 987], [669.203, 988], [668, 988.352], [667.384, 989], [666.391, 990], [666, 991]
-Path 351: [243, 976], [242, 976.064], [241, 977], [240, 977.474], [239, 978.415], [237.588, 979], [237, 980], [236, 980.54], [235, 981.478], [234.471, 982], [233.436, 983]
-Path 352: [285, 981], [286, 981.432], [286.311, 982], [287, 982]
-Path 353: [308, 981], [307, 981], [306, 982], [305, 982], [304, 983], [303, 983.513], [303, 985], [302.672, 986]
-Path 354: [312, 980.428], [313, 981], [313.644, 982], [314.563, 983], [315.518, 984], [316.444, 985], [317, 985.563], [317.594, 987], [318.27, 988], [319, 988]
-Path 355: [635, 979], [634, 979], [633, 980], [632, 980.143], [631, 981], [630, 981], [629.433, 982], [629, 983], [629, 984], [628.607, 985], [628, 985.185], [628, 986]
-Path 356: [868, 981], [867, 982], [866, 982.366], [866, 983], [865, 984], [864, 985], [863, 985.154], [862.184, 986], [861, 986.346], [860.341, 987], [859, 987.56], [858, 988.48], [858, 989], [857.186, 990], [856, 990], [855, 990.617], [854, 991.499], [854, 992], [853.317, 993], [852, 993.32], [852, 994]
-Path 357: [141, 982], [141, 983], [142, 983.531], [143, 984], [144, 984]
-Path 358: [619, 981], [619, 981.627], [620, 982], [620.562, 982], [621.479, 983], [622, 984], [622.47, 985], [623, 985.464], [623.381, 986], [624, 986], [625, 987]
-Path 359: [894, 968], [894, 968.635], [895.43, 969], [896.384, 970], [897, 971.359], [898, 972.479], [899, 973.474], [899.525, 974], [900.465, 975], [901.429, 976], [902, 977.423], [903, 978.476], [904, 979.431], [905, 980.392], [906, 981.401], [907.421, 982], [908.46, 983], [909, 984], [910, 984.421], [910.481, 985], [911, 985.39], [911.519, 986], [912.583, 987], [913.662, 988], [915, 988.619], [916, 989.565], [917, 990.545], [918, 991.609], [919, 992.7], [920, 993.549], [921, 994.482], [921.562, 995], [922.499, 996], [923, 996.383], [923.24, 997], [924, 997]
-Path 360: [292, 985], [293, 985], [294, 985.479], [294, 986]
-Path 361: [136, 986], [135, 986], [134.676, 987], [134, 987.378], [134, 988]
-Path 362: [523, 986], [522, 986], [521, 987], [520, 987.159], [519.202, 988], [518, 988.342], [517.343, 989], [516.327, 990], [515.326, 991], [514.313, 992], [513.238, 993], [512, 993.36], [511.36, 994], [510.292, 995], [509.207, 996], [508, 996.369], [507.38, 997], [506.335, 998], [505.374, 999]
-Path 363: [162, 987], [163, 987], [163.56, 988], [164.476, 989], [165, 989.585], [165.496, 991], [166, 991.401], [166.426, 992], [167, 992.358], [167, 993], [167.233, 994], [168, 994.778], [168, 996]
-Path 364: [380, 987], [379, 987], [378, 987], [377.598, 988], [377, 988.526], [376, 989]
-Path 365: [144, 987], [144, 988], [144, 989], [144, 990], [144.44, 991], [145, 991.301], [145, 992]
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index 468c69f20b4ca03e3aefe782287282e9d48fddb6..0000000000000000000000000000000000000000
--- a/Data/Baseline/OTB/Files/srRCC8GraphFilterOutput2.dot
+++ /dev/null
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diff --git a/Data/Baseline/OTB/Files/srRCC8GraphWriterOutput1.dot b/Data/Baseline/OTB/Files/srRCC8GraphWriterOutput1.dot
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deleted file mode 100644
index fcfe442dca79ccfc12b2f1b2fb7abfee4cf74a9a..0000000000000000000000000000000000000000
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diff --git a/Data/Input/ObjectReco/Boats/FeatureStats_RadiometricMoments_amplitude.xml b/Data/Input/ObjectReco/Boats/FeatureStats_RadiometricMoments_amplitude.xml
deleted file mode 100644
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-<?xml version="1.0" ?>
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- <Metadata>
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diff --git a/Documentation/Cookbook/rst/C++/UserGuide.rst b/Documentation/Cookbook/rst/C++/UserGuide.rst
index c557ef2e761c22797a3b6ebe000ca350507e2fbd..956d36e3ca03d27e8638f2cf1a376b9763e3de3e 100644
--- a/Documentation/Cookbook/rst/C++/UserGuide.rst
+++ b/Documentation/Cookbook/rst/C++/UserGuide.rst
@@ -705,7 +705,6 @@ Interest Points
See example :ref:`RatioLineDetectorExample.cxx`.
See example :ref:`CorrelationLineDetectorExample.cxx`.
See example :ref:`AsymmetricFusionOfLineDetectorExample.cxx`.
- See example :ref:`ParallelLineDetectionExample.cxx`.
* Segment Extraction. See example :ref:`LineSegmentDetectorExample.cxx`.
@@ -785,26 +784,9 @@ following expressions:
* Flusser Moments for Images. See example :ref:`FlusserMomentsImageFunctionExample.cxx`.
-Road and cloud extraction
+Cloud extraction
~~~~~~~~~~~~~~~~~~~~~~~~~
-Road extraction is a critical feature for an efficient use of high
-resolution satellite images. There are many applications of road
-extraction: update of GIS database, reference for image registration,
-help for identification algorithms and rapid mapping for example. Road
-network can be used to register an optical image with a map or an
-optical image with a radar image for example. Road network extraction
-can help for other algorithms: isolated building detection, bridge
-detection. In these cases, a rough extraction can be sufficient. In the
-context of response to crisis, a fast mapping is necessary: within
-6Â hours, infrastructures for the designated area are required. Within
-this timeframe, a manual extraction is inconceivable and an automatic
-help is necessary.
-
-* Road extraction filter. See example :ref:`ExtractRoadExample.cxx`.
-
-* Step by step road extraction. See example :ref:`ExtractRoadByStepsExample.cxx`.
-
* Cloud Detection. See example :ref:`CloudDetectionExample.cxx`.
Image Simulation
diff --git a/Documentation/Cookbook/rst/recipes/improc.rst b/Documentation/Cookbook/rst/recipes/improc.rst
index 4216062f7ebafc55de4e5ab342b03cb90ffee1a6..72f24b429994e2f58729ff50b2773bb58bdf25b1 100644
--- a/Documentation/Cookbook/rst/recipes/improc.rst
+++ b/Documentation/Cookbook/rst/recipes/improc.rst
@@ -289,128 +289,3 @@ skipped.
There is a cleanup option that can be disabled in order to check intermediate
outputs of this composite application.
-
-Dempster Shafer based Classifier Fusion
----------------------------------------
-
-This framework is dedicated to perform cartographic validation starting
-from the result of a detection (for example a road extraction), enhance
-the results viability by using a classifier fusion algorithm. Using a
-set of descriptors, the processing chain validates or invalidates the
-input geometrical features.
-
-Fuzzy Model (requisite)
-~~~~~~~~~~~~~~~~~~~~~~~
-
-The *DSFuzzyModelEstimation* application performs the fuzzy model
-estimation (once by use case: descriptor set / Belief support /
-Plausibility support). It has the following input parameters:
-
-- ``-psin`` a vector data of positive samples enriched according to the
- “Compute Descriptors†part
-
-- ``-nsin`` a vector data of negative samples enriched according to the
- “Compute Descriptors†part
-
-- ``-belsup`` a support for the Belief computation
-
-- ``-plasup`` a support for the Plausibility computation
-
-- ``-desclist`` an initialization model (xml file) or a descriptor name
- list (listing the descriptors to be included in the model)
-
-The application can be used like this:
-
-::
-
- otbcli_DSFuzzyModelEstimation -psin PosSamples.shp
- -nsin NegSamples.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -desclist "NONDVI" "ROADSA" "NOBUIL"
- -out FuzzyModel.xml
-
-The output file ``FuzzyModel.xml`` contains the optimal model to perform
-information fusion.
-
-First Step: Compute Descriptors
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-The first step in the classifier fusion based validation is to compute,
-for each studied polyline, the chosen descriptors. In this context, the
-*ComputePolylineFeatureFromImage* application can be used for a large
-range of descriptors. It has the following inputs:
-
-- ``-in`` an image (of the studied scene) corresponding to the chosen
- descriptor (NDVI, building Mask…)
-
-- ``-vd`` a vector data containing polyline of interest
-
-- ``-expr`` a formula (“b1 >0.4â€, “b1 == 0â€) where b1 is the standard
- name of input image first band
-
-- ``-field`` a field name corresponding to the descriptor codename
- (NONDVI, ROADSA...)
-
-The output is a vector data containing polylines with a new field
-containing the descriptor value. In order to add the “NONDVI†descriptor
-to an input vector data (“inVD.shpâ€) corresponding to the percentage of
-pixels along a polyline that verifies the formula “NDVI >0.4â€:
-
-::
-
- otbcli_ComputePolylineFeatureFromImage -in NDVI.TIF
- -vd inVD.shp
- -expr "b1 > 0.4"
- -field "NONDVI"
- -out VD_NONDVI.shp
-
-``NDVI.TIF`` is the NDVI mono band image of the studied scene. This step
-must be repeated for each chosen descriptor:
-
-::
-
- otbcli_ComputePolylineFeatureFromImage -in roadSpectralAngle.TIF
- -vd VD_NONDVI.shp
- -expr "b1 > 0.24"
- -field "ROADSA"
- -out VD_NONDVI_ROADSA.shp
-
-::
-
- otbcli_ComputePolylineFeatureFromImage -in Buildings.TIF
- -vd VD_NONDVI_ROADSA.shp
- -expr "b1 == 0"
- -field "NOBUILDING"
- -out VD_NONDVI_ROADSA_NOBUIL.shp
-
-Both ``NDVI.TIF`` and ``roadSpectralAngle.TIF`` can be produced using
-**Monteverdi** feature extraction capabilities, and ``Buildings.TIF``
-can be generated using **Monteverdi** rasterization module. From now on,
-``VD_NONDVI_ROADSA_NOBUIL.shp`` contains three descriptor fields. It
-will be used in the following part.
-
-Second Step: Feature Validation
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-The final application (*VectorDataDSValidation* ) will validate or
-invalidate the studied samples using `the Dempster-Shafer
-theory <http://en.wikipedia.org/wiki/Dempster%E2%80%93Shafer_theory>`_
-. Its inputs are:
-
-- ``-in`` an enriched vector data “VD\_NONDVI\_ROADSA\_NOBUIL.shpâ€
-
-- ``-belsup`` a support for the Belief computation
-
-- ``-plasup`` a support for the Plausibility computation
-
-- ``-descmod`` a fuzzy model FuzzyModel.xml
-
-The output is a vector data containing only the validated samples.
-
-::
-
- otbcli_VectorDataDSValidation -in extractedRoads_enriched.shp
- -descmod FuzzyModel.xml
- -out validatedSamples.shp
-
diff --git a/Examples/FeatureExtraction/CMakeLists.txt b/Examples/FeatureExtraction/CMakeLists.txt
index 19c504f658d111d89bbd3a107d495d0989e3d003..5d48aead0da95f1391506976bcfeb80c37083e36 100644
--- a/Examples/FeatureExtraction/CMakeLists.txt
+++ b/Examples/FeatureExtraction/CMakeLists.txt
@@ -38,18 +38,6 @@ target_link_libraries(CorrelationLineDetectorExample ${OTB_LIBRARIES})
add_executable(EdgeDensityExample EdgeDensityExample.cxx)
target_link_libraries(EdgeDensityExample ${OTB_LIBRARIES})
-#OTBRoadExtraction depends OTBMathParser. But OTB_USE_MUPARSER is OFF
-if(OTBMathParser_LOADED)
-add_executable(ExtractRoadByStepsExample ExtractRoadByStepsExample.cxx)
-target_link_libraries(ExtractRoadByStepsExample ${OTB_LIBRARIES})
-
-add_executable(ExtractRoadExample ExtractRoadExample.cxx)
-target_link_libraries(ExtractRoadExample ${OTB_LIBRARIES})
-
-add_executable(ParallelLineDetectionExample ParallelLineDetectionExample.cxx)
-target_link_libraries(ParallelLineDetectionExample ${OTB_LIBRARIES})
-endif()
-
add_executable(FlusserMomentsImageFunctionExample FlusserMomentsImageFunctionExample.cxx)
target_link_libraries(FlusserMomentsImageFunctionExample ${OTB_LIBRARIES})
@@ -71,12 +59,6 @@ target_link_libraries(PanTexExample ${OTB_LIBRARIES})
add_executable(RatioLineDetectorExample RatioLineDetectorExample.cxx)
target_link_libraries(RatioLineDetectorExample ${OTB_LIBRARIES})
-add_executable(SeamCarvingExample SeamCarvingExample.cxx)
-target_link_libraries(SeamCarvingExample ${OTB_LIBRARIES})
-
-add_executable(SeamCarvingOtherExample SeamCarvingOtherExample.cxx)
-target_link_libraries(SeamCarvingOtherExample ${OTB_LIBRARIES})
-
add_executable(SFSExample SFSExample.cxx)
target_link_libraries(SFSExample ${OTB_LIBRARIES})
diff --git a/Examples/FeatureExtraction/ExtractRoadByStepsExample.cxx b/Examples/FeatureExtraction/ExtractRoadByStepsExample.cxx
deleted file mode 100644
index 54891d83c85169c20f0e82311a78b2d4aba5f986..0000000000000000000000000000000000000000
--- a/Examples/FeatureExtraction/ExtractRoadByStepsExample.cxx
+++ /dev/null
@@ -1,414 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-// This example illustrates the details of the \doxygen{otb}{RoadExtractionFilter}.
-// This filter, described in the previous section, is a composite filter that includes
-// all the steps below. Individual filters can be replaced to design a road detector
-// targeted at SAR images for example.
-
-#include "otbPolyLineParametricPathWithValue.h"
-#include "otbSpectralAngleDistanceImageFilter.h"
-#include "itkGradientRecursiveGaussianImageFilter.h"
-#include "otbNeighborhoodScalarProductFilter.h"
-#include "otbRemoveIsolatedByDirectionFilter.h"
-#include "otbRemoveWrongDirectionFilter.h"
-#include "otbNonMaxRemovalByDirectionFilter.h"
-#include "otbVectorizationPathListFilter.h"
-#include "otbSimplifyPathListFilter.h"
-#include "otbBreakAngularPathListFilter.h"
-#include "otbRemoveTortuousPathListFilter.h"
-#include "otbLinkPathListFilter.h"
-#include "otbLikelihoodPathListFilter.h"
-#include "otbDrawPathListFilter.h"
-#include "otbLikelihoodPathListFilter.h"
-#include "otbMultiToMonoChannelExtractROI.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkRescaleIntensityImageFilter.h"
-#include "itkSqrtImageFilter.h"
-
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbMultiChannelExtractROI.h"
-#include "otbVectorRescaleIntensityImageFilter.h"
-#include "itkAddImageFilter.h"
-#include "itkSubtractImageFilter.h"
-#include "itkRGBPixel.h"
-#include "itkComposeImageFilter.h"
-#include "itkThresholdImageFilter.h"
-#include "itkSigmoidImageFilter.h"
-#include "itkThresholdImageFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "itkGrayscaleDilateImageFilter.h"
-
-/* Example usage:
-./ExtractRoadByStepsExample Input/qb_RoadExtract.tif Output/ExtractRoadByStepsExampleOutput.jpg Output/qb_ExtractRoad_pretty.jpg 337 557 432 859 0.00005 1.0
-*/
-
-/* Example usage:
-./ExtractRoadByStepsExample Input/qb_RoadExtract2.tif Output/ExtractRoadByStepsExampleOutput2.jpg Output/qb_ExtractRoad_pretty2.jpg 228 316 207 282 0.00005 1.0
-*/
-
-
-int main(int itkNotUsed(argc), char* argv[])
-{
-
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef unsigned char OutputPixelType;
- typedef itk::CovariantVector<PixelType, Dimension> VectorPixelType;
- typedef otb::Image<PixelType, Dimension> InternalImageType;
- typedef otb::VectorImage<PixelType, Dimension> MultiSpectralImageType;
- typedef otb::Image<VectorPixelType, Dimension> VectorImageType;
-
- typedef otb::PolyLineParametricPathWithValue<double, Dimension> PathType;
-
- typedef otb::ImageFileReader<MultiSpectralImageType> MultispectralReaderType;
-
- MultispectralReaderType::Pointer multispectralReader = MultispectralReaderType::New();
- multispectralReader->SetFileName(argv[1]);
-
- // Create an 3 band image for the software guide
- typedef otb::VectorImage<OutputPixelType, Dimension> OutputVectorImageType;
- typedef otb::ImageFileWriter<OutputVectorImageType> VectorWriterType;
- typedef otb::VectorRescaleIntensityImageFilter<MultiSpectralImageType, OutputVectorImageType> VectorRescalerType;
- typedef otb::MultiChannelExtractROI<unsigned char, unsigned char> ChannelExtractorType;
-
- // The GenerateOutputInformation() information is required here so
- // that the number of component per pixel is update and known to set
- // up the maximum and minimum values for the rescaling filter
- multispectralReader->GenerateOutputInformation();
-
- OutputVectorImageType::PixelType minimum, maximum;
- minimum.SetSize(multispectralReader->GetOutput()->GetNumberOfComponentsPerPixel());
- maximum.SetSize(multispectralReader->GetOutput()->GetNumberOfComponentsPerPixel());
- minimum.Fill(0);
- maximum.Fill(255);
-
- VectorRescalerType::Pointer vr = VectorRescalerType::New();
- vr->SetInput(multispectralReader->GetOutput());
- vr->SetOutputMinimum(minimum);
- vr->SetOutputMaximum(maximum);
- vr->SetClampThreshold(0.01);
-
- ChannelExtractorType::Pointer selecter = ChannelExtractorType::New();
- selecter->SetInput(vr->GetOutput());
- selecter->SetExtractionRegion(multispectralReader->GetOutput()->GetLargestPossibleRegion());
- selecter->SetChannel(3);
- selecter->SetChannel(2);
- selecter->SetChannel(1);
-
- VectorWriterType::Pointer vectWriter = VectorWriterType::New();
- vectWriter->SetFileName(argv[3]);
- vectWriter->SetInput(selecter->GetOutput());
- vectWriter->Update();
-
- MultiSpectralImageType::PixelType pixelRef;
- pixelRef.SetSize(4);
- pixelRef[0] = atoi(argv[4]);
- pixelRef[1] = atoi(argv[5]);
- pixelRef[2] = atoi(argv[6]);
- pixelRef[3] = atoi(argv[7]);
-
- double resolution = 0.6; // to get directly from metadata
- double alpha = atof(argv[9]);
-
- // The spectral angle is used to compute a grayscale image from the
- // multispectral original image using
- // \doxygen{otb}{SpectralAngleDistanceImageFilter}. The spectral
- // angle is illustrated on
- // Figure~\ref{fig:RoadExtractionSpectralAngleDiagram}. Pixels
- // corresponding to roads are in darker color.
- //
- // \begin{figure}
- // \center
- // \includegraphics[width=0.40\textwidth]{RoadExtractionSpectralAngleDiagram.eps}
- // \itkcaption[Spectral Angle]{Illustration of the spectral angle
- // for one pixel of a three-band image. One of the vector is the
- // reference pixel and the other is the current pixel.}
- // \label{fig:RoadExtractionSpectralAngleDiagram}
- // \end{figure}
- //
- //
-
- typedef otb::SpectralAngleDistanceImageFilter<MultiSpectralImageType, InternalImageType> SAFilterType;
- SAFilterType::Pointer saFilter = SAFilterType::New();
- saFilter->SetReferencePixel(pixelRef);
- saFilter->SetInput(multispectralReader->GetOutput());
-
- // A square root is applied to the spectral angle image in order to enhance contrast between
- // darker pixels (which are pixels of interest) with \doxygen{itk}{SqrtImageFilter}.
-
- typedef itk::SqrtImageFilter<InternalImageType, InternalImageType> SqrtFilterType;
- SqrtFilterType::Pointer sqrtFilter = SqrtFilterType::New();
- sqrtFilter->SetInput(saFilter->GetOutput());
-
- // Use the Gaussian gradient filter compute the gradient in x and y direction
- // respectively
- // (\doxygen{itk}{GradientRecursiveGaussianImageFilter}).
-
- double sigma = alpha * (1.2 / resolution + 1);
- typedef itk::GradientRecursiveGaussianImageFilter<InternalImageType, VectorImageType> GradientFilterType;
- GradientFilterType::Pointer gradientFilter = GradientFilterType::New();
- gradientFilter->SetSigma(sigma);
- gradientFilter->SetInput(sqrtFilter->GetOutput());
-
- // Compute the scalar product of the neighboring pixels and keep the
- // minimum value and the direction with \doxygen{otb}{NeighborhoodScalarProductFilter}.
- // This is the line detector described
- // in \cite{Lacroix1998}.
-
- typedef otb::NeighborhoodScalarProductFilter<VectorImageType, InternalImageType, InternalImageType> NeighborhoodScalarProductType;
- NeighborhoodScalarProductType::Pointer scalarFilter = NeighborhoodScalarProductType::New();
- scalarFilter->SetInput(gradientFilter->GetOutput());
-
- // The resulting image is passed to the \doxygen{otb}{RemoveIsolatedByDirectionFilter}
- // filter to remove pixels
- // with no neighbor having the same direction.
-
- typedef otb::RemoveIsolatedByDirectionFilter<InternalImageType, InternalImageType, InternalImageType> RemoveIsolatedByDirectionType;
- RemoveIsolatedByDirectionType::Pointer removeIsolatedByDirectionFilter = RemoveIsolatedByDirectionType::New();
- removeIsolatedByDirectionFilter->SetInput(scalarFilter->GetOutput());
- removeIsolatedByDirectionFilter->SetInputDirection(scalarFilter->GetOutputDirection());
-
- // We remove pixels having a direction corresponding to bright lines
- // as we know that after the spectral angle, roads are in darker color
- // with the \doxygen{otb}{RemoveWrongDirectionFilter} filter.
-
- typedef otb::RemoveWrongDirectionFilter<InternalImageType, InternalImageType, InternalImageType> RemoveWrongDirectionType;
- RemoveWrongDirectionType::Pointer removeWrongDirectionFilter = RemoveWrongDirectionType::New();
- removeWrongDirectionFilter->SetInput(removeIsolatedByDirectionFilter->GetOutput());
- removeWrongDirectionFilter->SetInputDirection(scalarFilter->GetOutputDirection());
-
- // We remove pixels which are not maximum on the direction
- // perpendicular to the road direction with the \doxygen{otb}{NonMaxRemovalByDirectionFilter}.
-
- typedef otb::NonMaxRemovalByDirectionFilter<InternalImageType, InternalImageType, InternalImageType> NonMaxRemovalByDirectionType;
- NonMaxRemovalByDirectionType::Pointer nonMaxRemovalByDirectionFilter = NonMaxRemovalByDirectionType::New();
- nonMaxRemovalByDirectionFilter->SetInput(removeWrongDirectionFilter->GetOutput());
- nonMaxRemovalByDirectionFilter->SetInputDirection(scalarFilter->GetOutputDirection());
-
- // Extracted road are vectorized into polylines with \doxygen{otb}{VectorizationPathListFilter}.
-
- typedef otb::VectorizationPathListFilter<InternalImageType, InternalImageType, PathType> VectorizationFilterType;
- VectorizationFilterType::Pointer vectorizationFilter = VectorizationFilterType::New();
- vectorizationFilter->SetInput(nonMaxRemovalByDirectionFilter->GetOutput());
- vectorizationFilter->SetInputDirection(scalarFilter->GetOutputDirection());
- vectorizationFilter->SetAmplitudeThreshold(atof(argv[8]));
-
- // However, this vectorization is too simple and need to be refined
- // to be usable. First, we remove all aligned points to make one segment with
- // \doxygen{otb}{SimplifyPathListFilter}.
- // Then we break the polylines which have sharp angles as they are probably
- // not road with \doxygen{otb}{BreakAngularPathListFilter}.
- // Finally we remove path which are too short with \doxygen{otb}{RemoveTortuousPathListFilter}.
-
- typedef otb::SimplifyPathListFilter<PathType> SimplifyPathType;
- SimplifyPathType::Pointer simplifyPathListFilter = SimplifyPathType::New();
- simplifyPathListFilter->GetFunctor().SetTolerance(1.0);
- simplifyPathListFilter->SetInput(vectorizationFilter->GetOutput());
-
- typedef otb::BreakAngularPathListFilter<PathType> BreakAngularPathType;
- BreakAngularPathType::Pointer breakAngularPathListFilter = BreakAngularPathType::New();
- breakAngularPathListFilter->SetMaxAngle(otb::CONST_PI / 8.);
- breakAngularPathListFilter->SetInput(simplifyPathListFilter->GetOutput());
-
- typedef otb::RemoveTortuousPathListFilter<PathType> RemoveTortuousPathType;
- RemoveTortuousPathType::Pointer removeTortuousPathListFilter = RemoveTortuousPathType::New();
- removeTortuousPathListFilter->GetFunctor().SetThreshold(1.0);
- removeTortuousPathListFilter->SetInput(breakAngularPathListFilter->GetOutput());
-
- // Polylines within a certain range are linked (\doxygen{otb}{LinkPathListFilter}) to
- // try to fill gaps due to occultations by vehicules, trees, etc. before simplifying
- // polylines (\doxygen{otb}{SimplifyPathListFilter}) and
- // removing the shortest ones with \doxygen{otb}{RemoveTortuousPathListFilter}.
-
- typedef otb::LinkPathListFilter<PathType> LinkPathType;
- LinkPathType::Pointer linkPathListFilter = LinkPathType::New();
- linkPathListFilter->SetDistanceThreshold(25.0 / resolution);
- linkPathListFilter->SetAngularThreshold(otb::CONST_PI / 8);
- linkPathListFilter->SetInput(removeTortuousPathListFilter->GetOutput());
-
- SimplifyPathType::Pointer simplifyPathListFilter2 = SimplifyPathType::New();
- simplifyPathListFilter2->GetFunctor().SetTolerance(1.0);
- simplifyPathListFilter2->SetInput(linkPathListFilter->GetOutput());
-
- RemoveTortuousPathType::Pointer removeTortuousPathListFilter2 = RemoveTortuousPathType::New();
- removeTortuousPathListFilter2->GetFunctor().SetThreshold(10.0);
- removeTortuousPathListFilter2->SetInput(simplifyPathListFilter2->GetOutput());
-
- // A value can be associated with each polyline according to pixel values
- // under the polyline with \doxygen{otb}{LikelihoodPathListFilter}. A higher value
- // will mean a higher Likelihood to be a road.
-
- typedef otb::LikelihoodPathListFilter<PathType, InternalImageType> PathListToPathListWithValueType;
- PathListToPathListWithValueType::Pointer pathListConverter = PathListToPathListWithValueType::New();
- pathListConverter->SetInput(removeTortuousPathListFilter2->GetOutput());
- pathListConverter->SetInputImage(nonMaxRemovalByDirectionFilter->GetOutput());
-
- // A black background image is built to draw the path on.
-
- InternalImageType::Pointer output = InternalImageType::New();
- output->CopyInformation(multispectralReader->GetOutput());
- output->SetRegions(output->GetLargestPossibleRegion());
- output->Allocate();
- output->FillBuffer(0.0);
-
- // Polylines are drawn on a black background image with \doxygen{otb}{DrawPathListFilter}.
- // The \code{SetUseIternalValues()} tell the drawing filter to draw the path with its Likelihood
- // value.
-
- typedef otb::DrawPathListFilter<InternalImageType, PathType, InternalImageType> DrawPathType;
- DrawPathType::Pointer drawPathListFilter = DrawPathType::New();
- drawPathListFilter->SetInput(output);
- drawPathListFilter->SetInputPath(pathListConverter->GetOutput());
- drawPathListFilter->SetUseInternalPathValue(true);
-
- // The output from the drawing filter contains very small values (Likelihood values). Therefore
- // the image has to be rescaled to be viewed. The whole pipeline is executed by invoking
- // the \code{Update()} method on this last filter.
-
- typedef itk::RescaleIntensityImageFilter<InternalImageType, InternalImageType> RescalerType;
- RescalerType::Pointer rescaler = RescalerType::New();
- rescaler->SetOutputMaximum(255);
- rescaler->SetOutputMinimum(0);
- rescaler->SetInput(drawPathListFilter->GetOutput());
- rescaler->Update();
-
- // this small piece of code aims at producing a pretty RGB png result image.
- typedef otb::MultiToMonoChannelExtractROI<OutputPixelType, PixelType> ChannelExtractionFilterType;
- typedef itk::AddImageFilter<InternalImageType, InternalImageType, InternalImageType> AddFilterType;
- typedef itk::SubtractImageFilter<InternalImageType, InternalImageType, InternalImageType> SubtractFilterType;
- typedef itk::ThresholdImageFilter<InternalImageType> ThresholdFilterType;
- typedef itk::RGBPixel<OutputPixelType> RGBPixelType;
- typedef otb::Image<RGBPixelType, Dimension> RGBImageType;
- typedef itk::ComposeImageFilter<InternalImageType, RGBImageType> ComposeFilterType;
- typedef otb::ImageFileWriter<RGBImageType> RGBWriterType;
- typedef itk::BinaryBallStructuringElement<PixelType, Dimension> StructuringElementType;
- typedef itk::GrayscaleDilateImageFilter<InternalImageType, InternalImageType, StructuringElementType> DilateFilterType;
-
- StructuringElementType se;
- se.SetRadius(1);
- se.CreateStructuringElement();
-
- // Filters definitions
- ChannelExtractionFilterType::Pointer channelExtractor1 = ChannelExtractionFilterType::New();
- ChannelExtractionFilterType::Pointer channelExtractor2 = ChannelExtractionFilterType::New();
- ChannelExtractionFilterType::Pointer channelExtractor3 = ChannelExtractionFilterType::New();
-
- AddFilterType::Pointer addFilter = AddFilterType::New();
- SubtractFilterType::Pointer subtract2 = SubtractFilterType::New();
- SubtractFilterType::Pointer subtract3 = SubtractFilterType::New();
- ThresholdFilterType::Pointer threshold11 = ThresholdFilterType::New();
- ThresholdFilterType::Pointer threshold21 = ThresholdFilterType::New();
- ThresholdFilterType::Pointer threshold31 = ThresholdFilterType::New();
- ThresholdFilterType::Pointer threshold12 = ThresholdFilterType::New();
- ThresholdFilterType::Pointer threshold22 = ThresholdFilterType::New();
- ThresholdFilterType::Pointer threshold32 = ThresholdFilterType::New();
-
- ComposeFilterType::Pointer composer = ComposeFilterType::New();
- RGBWriterType::Pointer writer = RGBWriterType::New();
-
- DilateFilterType::Pointer dilater = DilateFilterType::New();
-
- dilater->SetInput(rescaler->GetOutput());
- dilater->SetKernel(se);
-
- // Extract each channel
- channelExtractor1->SetInput(vr->GetOutput());
- channelExtractor2->SetInput(vr->GetOutput());
- channelExtractor3->SetInput(vr->GetOutput());
-
- channelExtractor1->SetChannel(3);
- channelExtractor2->SetChannel(2);
- channelExtractor3->SetChannel(1);
-
- // Add the path to the red component
- addFilter->SetInput1(channelExtractor1->GetOutput());
- addFilter->SetInput2(dilater->GetOutput());
-
- subtract2->SetInput1(channelExtractor2->GetOutput());
- subtract2->SetInput2(dilater->GetOutput());
- subtract3->SetInput1(channelExtractor3->GetOutput());
- subtract3->SetInput2(dilater->GetOutput());
-
- // Threshold outside the [0, 255] range
-
- threshold11->SetInput(addFilter->GetOutput());
- threshold11->ThresholdBelow(0);
- threshold11->SetOutsideValue(0);
- threshold12->SetInput(threshold11->GetOutput());
- threshold12->ThresholdAbove(255);
- threshold12->SetOutsideValue(255);
-
- threshold21->SetInput(subtract2->GetOutput());
- threshold21->ThresholdBelow(0);
- threshold21->SetOutsideValue(0);
- threshold22->SetInput(threshold21->GetOutput());
- threshold22->ThresholdAbove(255);
- threshold22->SetOutsideValue(255);
-
- threshold31->SetInput(subtract3->GetOutput());
- threshold31->ThresholdBelow(0);
- threshold31->SetOutsideValue(0);
- threshold32->SetInput(threshold31->GetOutput());
- threshold32->ThresholdAbove(255);
- threshold32->SetOutsideValue(255);
-
- // Compose the output image
- composer->SetInput(0, threshold12->GetOutput());
- composer->SetInput(1, threshold22->GetOutput());
- composer->SetInput(2, threshold32->GetOutput());
-
- // Write the new rgb image
- writer->SetInput(composer->GetOutput());
- writer->SetFileName(argv[2]);
- writer->Update();
-
- // Figures~\ref{fig:ROADEXTRACTIONBYSTEPS} and \ref{fig:ROADEXTRACTIONBYSTEPS2}
- // show the result of applying
- // the road extraction by steps to a fusionned Quickbird image. The result image
- // is a RGB composition showing the extracted path in red. Full processing took
- // about 3 seconds for each image.
- //
- // \begin{figure}[htbp]
- // \center
- // \includegraphics[width=0.44\textwidth]{qb_ExtractRoad_pretty.eps}
- // \includegraphics[width=0.44\textwidth]{ExtractRoadByStepsExampleOutput.eps}
- // \itkcaption[Road extraction filter application]{Result of applying
- // the road extraction by steps pipeline to a fusionned Quickbird
- // image. From left to right : original image, extracted road with their
- // Likelihood values.}
- // \label{fig:ROADEXTRACTIONBYSTEPS}
- // \end{figure}
- //
- // \begin{figure}[htbp]
- // \center
- // \includegraphics[width=0.44\textwidth]{qb_ExtractRoad_pretty2.eps}
- // \includegraphics[width=0.44\textwidth]{ExtractRoadByStepsExampleOutput2.eps}
- // \itkcaption[Road extraction filter application]{Result of applying
- // the road extraction by steps pipeline to a fusionned Quickbird
- // image. From left to right : original image, extracted road with their
- // Likelihood values.}
- // \label{fig:ROADEXTRACTIONBYSTEPS2}
- // \end{figure}
-
- return EXIT_SUCCESS;
-}
diff --git a/Examples/FeatureExtraction/ExtractRoadExample.cxx b/Examples/FeatureExtraction/ExtractRoadExample.cxx
deleted file mode 100644
index 94c4361e0d20c29ea24a6461e2248374e7047524..0000000000000000000000000000000000000000
--- a/Examples/FeatureExtraction/ExtractRoadExample.cxx
+++ /dev/null
@@ -1,246 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-/* Example usage:
-./ExtractRoadExample Input/qb_RoadExtract.tif Output/ExtractRoadOutput.png 337 557 432 859 1.0 0.00005 1.0 0.39269 1.0 10.0 25.
-*/
-
-
-// The easiest way to use the road extraction filter provided by OTB is to use the composite
-// filter. If a modification in the pipeline is required to adapt to a particular situation,
-// the step by step example, described in the next section can be adapted.
-//
-// This example demonstrates the use of the \doxygen{otb}{RoadExtractionFilter}.
-// This filter is a composite filter achieving road extraction according to the algorithm
-// adapted by E. Christophe and J. Inglada \cite{Christophe2007} from an original method
-// proposed in \cite{Lacroix1998}.
-//
-// The first step toward the use of this filter is the inclusion of the proper header files.
-
-#include "otbPolyLineParametricPathWithValue.h"
-#include "otbRoadExtractionFilter.h"
-#include "otbDrawPathListFilter.h"
-
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "itkRescaleIntensityImageFilter.h"
-#include "otbMath.h"
-
-#include "itkInvertIntensityImageFilter.h"
-#include "itkGrayscaleDilateImageFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-
-int main(int argc, char* argv[])
-{
-
- if (argc != 14)
- {
- std::cerr << "Usage: " << argv[0];
- std::cerr << " inputFileName outputFileName firstPixelComponent secondPixelComponent ";
- std::cerr << "thirdPixelComponent fourthPixelComponent alpha amplitudeThrehsold tolerance ";
- std::cerr << "angularThreshold-maxAngle firstMeanDistanceThreshold secondMeanDistanceThreshold ";
- std::cerr << "distanceThreshold" << std::endl;
- return EXIT_FAILURE;
- }
-
- const unsigned int Dimension = 2;
- // Then we must decide what pixel type to use for the image. We choose to do
- // all the computation in floating point precision and rescale the results
- // between 0 and 255 in order to export PNG images.
-
- typedef double InputPixelType;
- typedef unsigned char OutputPixelType;
-
- // The images are defined using the pixel type and the dimension. Please note that
- // the \doxygen{otb}{RoadExtractionFilter} needs an \doxygen{otb}{VectorImage} as input
- // to handle multispectral images.
-
- typedef otb::VectorImage<InputPixelType, Dimension> InputVectorImageType;
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- // We define the type of the polyline that the filter produces. We use the
- // \doxygen{otb}{PolyLineParametricPathWithValue}, which allows the filter to produce
- // a likehood value along with each polyline. The filter is able to produce
- // \doxygen{itk}{PolyLineParametricPath} as well.
-
- typedef otb::PolyLineParametricPathWithValue<InputPixelType, Dimension> PathType;
-
- // Now we can define the \doxygen{otb}{RoadExtractionFilter} that takes a multi-spectral
- // image as input and produces a list of polylines.
-
- typedef otb::RoadExtractionFilter<InputVectorImageType, PathType> RoadExtractionFilterType;
-
- // We also define an \doxygen{otb}{DrawPathListFilter} to draw the output
- // polylines on an image, taking their likehood values into account.
-
- typedef otb::DrawPathListFilter<InputImageType, PathType, InputImageType> DrawPathFilterType;
-
- // The intensity rescaling of the results will be carried out by the
- // \doxygen{itk}{RescaleIntensityImageFilter} which is templated by the
- // input and output image types.
-
- typedef itk::RescaleIntensityImageFilter<InputImageType, OutputImageType> RescalerType;
-
- // An \doxygen{otb}{ImageFileReader} class is also instantiated in order to read
- // image data from a file. Then, an \doxygen{otb}{ImageFileWriter}
- // is instantiated in order to write the output image to a file.
-
- typedef otb::ImageFileReader<InputVectorImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- // The different filters composing our pipeline are created by invoking their
- // \code{New()} methods, assigning the results to smart pointers.
-
- ReaderType::Pointer reader = ReaderType::New();
- RoadExtractionFilterType::Pointer roadExtractionFilter = RoadExtractionFilterType::New();
- DrawPathFilterType::Pointer drawingFilter = DrawPathFilterType::New();
- RescalerType::Pointer rescaleFilter = RescalerType::New();
- WriterType::Pointer writer = WriterType::New();
-
- reader->SetFileName(argv[1]);
-
- // The \doxygen{otb}{RoadExtractionFilter} needs to have a reference pixel
- // corresponding to the spectral content likely to represent a road. This is done
- // by passing a pixel to the filter. Here we suppose that the input image
- // has four spectral bands.
-
- InputVectorImageType::PixelType ReferencePixel;
- ReferencePixel.SetSize(4);
- ReferencePixel.SetElement(0, ::atof(argv[3]));
- ReferencePixel.SetElement(1, ::atof(argv[4]));
- ReferencePixel.SetElement(2, ::atof(argv[5]));
- ReferencePixel.SetElement(3, ::atof(argv[6]));
- roadExtractionFilter->SetReferencePixel(ReferencePixel);
-
- // We must also set the alpha parameter of the filter which allows us to tune the width of the roads
- // we want to extract. Typical value is $1.0$ and should be working in most situations.
-
- roadExtractionFilter->SetAlpha(atof(argv[7]));
-
- // All other parameter should not influence the results too much in most situation and can
- // be kept at the default value.
- //
- // The amplitude threshold parameter tunes the sensitivity of the vectorization step. A typical
- // value is $5 \cdot 10^{-5}$.
-
- roadExtractionFilter->SetAmplitudeThreshold(atof(argv[8]));
-
- // The tolerance threshold tunes the sensitivity of the path simplification step.
- // Typical value is $1.0$.
-
- roadExtractionFilter->SetTolerance(atof(argv[9]));
-
- // Roads are not likely to have sharp turns. Therefore we set the max angle parameter,
- // as well as the link angular threshold. The value is typically $\frac{\pi}{8}$.
-
- roadExtractionFilter->SetMaxAngle(atof(argv[10]));
- roadExtractionFilter->SetAngularThreshold(atof(argv[10]));
-
- // The \doxygen{otb}{RoadExtractionFilter} performs two odd path removing operations at different stage of
- // its execution. The first mean distance threshold and the second mean distance threshold set their criterion
- // for removal. Path are removed if their mean distance between nodes is to small, since such path coming
- // from previous filters are likely to be tortuous. The first removal operation as a typical mean distance
- // threshold parameter of $1.0$, and the second of $10.0$.
-
- roadExtractionFilter->SetFirstMeanDistanceThreshold(atof(argv[11]));
- roadExtractionFilter->SetSecondMeanDistanceThreshold(atof(argv[12]));
-
- // The \doxygen{otb}{RoadExtractionFilter} is able to link path whose ends are near
- // according to an euclidean distance criterion. The threshold for this distance
- // to link a path is the distance threshold parameter. A typical value is $25$.
-
- roadExtractionFilter->SetDistanceThreshold(atof(argv[13]));
-
- // We will now create a black background image to draw the resulting polyline on.
- // To achieve this we need to know the size of our input image. Therefore we trigger the
- // \code{GenerateOutputInformation()} of the reader.
-
- reader->GenerateOutputInformation();
- InputImageType::Pointer blackBackground = InputImageType::New();
- blackBackground->CopyInformation(reader->GetOutput());
- blackBackground->SetRegions(blackBackground->GetLargestPossibleRegion());
- blackBackground->Allocate();
- blackBackground->FillBuffer(0);
-
- // We tell the \doxygen{otb}{DrawPathListFilter} to try to use the likehood value
- // embedded within the polyline as a value for drawing this polyline if possible.
-
- drawingFilter->UseInternalPathValueOn();
-
- // The \code{itk::RescaleIntensityImageFilter} needs to know which
- // is the minimum and maximum values of the output generated
- // image. Those can be chosen in a generic way by using the
- // \code{NumericTraits} functions, since they are templated over
- // the pixel type.
-
- rescaleFilter->SetOutputMinimum(itk::NumericTraits<OutputPixelType>::min());
- rescaleFilter->SetOutputMaximum(itk::NumericTraits<OutputPixelType>::max());
-
- // Now it is time for some pipeline wiring.
-
- roadExtractionFilter->SetInput(reader->GetOutput());
- drawingFilter->SetInput(blackBackground);
- drawingFilter->SetInputPath(roadExtractionFilter->GetOutput());
- rescaleFilter->SetInput(drawingFilter->GetOutput());
-
- // The update of the pipeline is triggered by the \code{Update()} method
- // of the rescale intensity filter.
-
- rescaleFilter->Update();
-
- // output image enhancement
- typedef itk::BinaryBallStructuringElement<OutputPixelType, Dimension> StructuringElementType;
- typedef itk::GrayscaleDilateImageFilter<OutputImageType, OutputImageType, StructuringElementType> DilateFilterType;
- typedef itk::InvertIntensityImageFilter<OutputImageType, OutputImageType> InvertFilterType;
-
- StructuringElementType se;
- se.SetRadius(1);
- se.CreateStructuringElement();
-
- DilateFilterType::Pointer dilater = DilateFilterType::New();
-
- dilater->SetInput(rescaleFilter->GetOutput());
- dilater->SetKernel(se);
-
- InvertFilterType::Pointer invertFilter = InvertFilterType::New();
- invertFilter->SetInput(dilater->GetOutput());
-
- writer->SetFileName(argv[2]);
- writer->SetInput(invertFilter->GetOutput());
- writer->Update();
-
- // Figure~\ref{fig:ROADEXTRACTION_FILTER} shows the result of applying
- // the road extraction filter to a fusionned Quickbird image.
- // \begin{figure}
- // \center
- // \includegraphics[width=0.44\textwidth]{qb_ExtractRoad_pretty.eps}
- // \includegraphics[width=0.44\textwidth]{ExtractRoadOutput.eps}
- // \itkcaption[Road extraction filter application]{Result of applying
- // the \doxygen{otb}{RoadExtractionFilter} to a fusionned Quickbird
- // image. From left to right : original image, extracted road with their
- // likehood values (color are inverted for display).}
- // \label{fig:ROADEXTRACTION_FILTER}
- // \end{figure}
-
- return EXIT_SUCCESS;
-}
diff --git a/Examples/FeatureExtraction/ParallelLineDetectionExample.cxx b/Examples/FeatureExtraction/ParallelLineDetectionExample.cxx
deleted file mode 100644
index 305fd72b5ade098bd0ec217ee49a71b41c3211e6..0000000000000000000000000000000000000000
--- a/Examples/FeatureExtraction/ParallelLineDetectionExample.cxx
+++ /dev/null
@@ -1,238 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-/* Example usage:
-./ParallelLineDetectionExample Output/Lines.png Output/ParallelLines.png 20 2 10
-*/
-
-
-// This example illustrates the details of the \doxygen{otb}{ParallelLinePathListFilter}.
-//
-
-#include "itkPolyLineParametricPath.h"
-#include "otbDrawPathListFilter.h"
-
-#include "otbParallelLinePathListFilter.h"
-
-#include "otbImage.h"
-#include "otbImageFileWriter.h"
-
-int main(int argc, char* argv[])
-{
- if (argc != 6)
- {
- std::cerr << "Usage: " << std::endl;
- std::cerr << argv[0] << " outputImage ";
- std::cerr << " outputParallelLineImage ";
- std::cerr << " distThreshParallel angThreshParallel commonDistThreshParallel" << std::endl;
- return EXIT_FAILURE;
- }
-
- double distThreshParallel = atof(argv[3]);
- double angThreshParallel = atof(argv[4]);
- double commonDistThreshParallel = atof(argv[5]);
-
- // We start by creating an empty image
- const unsigned int Dimension = 2;
- typedef unsigned char PixelType;
-
- typedef otb::Image<PixelType, Dimension> ImageType;
-
- ImageType::Pointer image = ImageType::New();
-
- ImageType::IndexType start;
-
- start[0] = 0;
- start[1] = 0;
-
- ImageType::SizeType size;
- size[0] = 600;
- size[1] = 300;
-
- ImageType::RegionType region;
-
- region.SetSize(size);
- region.SetIndex(start);
- image->SetRegions(region);
- image->Allocate();
- image->FillBuffer(itk::NumericTraits<PixelType>::Zero);
-
- // We create some lines
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::ObjectList<PathType> PathListType;
-
- PathListType::Pointer lineList = PathListType::New();
-
- typedef PathType::ContinuousIndexType ContinuousIndexType;
- ContinuousIndexType cindex;
-
- /*-----*/
- PathType::Pointer aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 1;
- cindex[1] = 41;
- aLine->AddVertex(cindex);
-
- cindex[0] = 175;
- cindex[1] = 204;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 60;
- cindex[1] = 18;
- aLine->AddVertex(cindex);
-
- cindex[0] = 203;
- cindex[1] = 164;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 174;
- cindex[1] = 99;
- aLine->AddVertex(cindex);
-
- cindex[0] = 281;
- cindex[1] = 1;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 3;
- cindex[1] = 233;
- aLine->AddVertex(cindex);
-
- cindex[0] = 191;
- cindex[1] = 227;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 254;
- cindex[1] = 279;
- aLine->AddVertex(cindex);
-
- cindex[0] = 351;
- cindex[1] = 110;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 270;
- cindex[1] = 287;
- aLine->AddVertex(cindex);
-
- cindex[0] = 368;
- cindex[1] = 120;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 355;
- cindex[1] = 204;
- aLine->AddVertex(cindex);
-
- cindex[0] = 528;
- cindex[1] = 199;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 437;
- cindex[1] = 243;
- aLine->AddVertex(cindex);
-
- cindex[0] = 591;
- cindex[1] = 237;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- // Polylines are drawn on a black
- typedef otb::DrawPathListFilter<ImageType, PathType, ImageType> DrawPathType;
- DrawPathType::Pointer drawPathListFilter = DrawPathType::New();
- drawPathListFilter->SetInput(image);
- drawPathListFilter->SetInputPath(lineList);
- drawPathListFilter->SetPathValue(itk::NumericTraits<PixelType>::max());
-
- typedef otb::ImageFileWriter<ImageType> WriterType;
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(drawPathListFilter->GetOutput());
- writer->SetFileName(argv[1]);
- writer->Update();
-
- // Parallel lines are detected. A minimum common length, an angular
- // threshold and a maximum distance threshold have to specified.
- // The input is a pathList of the previously extracted line segments.
- typedef otb::ParallelLinePathListFilter<PathType> ParallelLinePathType;
- ParallelLinePathType::Pointer parallelLinePathListFilter = ParallelLinePathType::New();
- parallelLinePathListFilter->SetDistanceThreshold(distThreshParallel);
- parallelLinePathListFilter->SetAngularThreshold(angThreshParallel);
- parallelLinePathListFilter->SetCommonDistanceThreshold(commonDistThreshParallel);
- parallelLinePathListFilter->SetInput(lineList);
- parallelLinePathListFilter->Update();
-
- // A black background image is built to draw the path on.
- ImageType::Pointer outputParallel = ImageType::New();
- outputParallel->SetRegions(image->GetLargestPossibleRegion());
- outputParallel->Allocate();
- outputParallel->FillBuffer(itk::NumericTraits<PixelType>::Zero);
-
- // Parallel lines are drawn on a black background image with \doxygen{otb}{DrawPathListFilter}.
- // The \code{SetUseIternalValues()} tells the drawing filter to draw the path with its likelihood
- // value.
- // typedef otb::DrawPathListFilter<ImageType, PathType, ImageType> DrawPathType;
- DrawPathType::Pointer drawPathListFilterParallel = DrawPathType::New();
- drawPathListFilterParallel->SetInput(outputParallel);
- drawPathListFilterParallel->SetInputPath(parallelLinePathListFilter->GetOutput());
- drawPathListFilter->SetPathValue(itk::NumericTraits<PixelType>::max());
- drawPathListFilterParallel->SetUseInternalPathValue(false);
-
- // Write the Line image
- WriterType::Pointer writerParallel = WriterType::New();
- writerParallel->SetInput(drawPathListFilterParallel->GetOutput());
- writerParallel->SetFileName(argv[2]);
- writerParallel->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Examples/FeatureExtraction/SeamCarvingExample.cxx b/Examples/FeatureExtraction/SeamCarvingExample.cxx
deleted file mode 100644
index 854872a1b56ec802b03b13569154f4e1c2df596b..0000000000000000000000000000000000000000
--- a/Examples/FeatureExtraction/SeamCarvingExample.cxx
+++ /dev/null
@@ -1,176 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-// This example illustrates the details of the seam carving operation.
-// References to this method can be found in \cite{Avidan07}. This example
-// details the use of \doxygen{otb}{ImageToCarvingPathFilter} and
-// \doxygen{otb}{RemoveCarvingPathFilter}.
-//
-// In this example, a loop is defined to remove a vertical or horizontal seam
-// at each step of the algorithm. The seam with the minimum energy is chosen.
-
-/* Example usage:
-./SeamCarvingExample Input/QB_Suburb.png Output/SeamCarvingExampleOutput.png 50
-*/
-
-
-#include "otbImage.h"
-#include "itkPolyLineParametricPath.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkGradientMagnitudeImageFilter.h"
-#include "itkRescaleIntensityImageFilter.h"
-
-#include "otbDrawPathFilter.h"
-#include "otbImageToCarvingPathFilter.h"
-#include "otbRemoveCarvingPathFilter.h"
-
-#include "itkImageDuplicator.h"
-
-int main(int itkNotUsed(argc), char* argv[])
-{
-
- typedef float InputPixelType;
- typedef unsigned char OutputPixelType;
- const unsigned int Dimension = 2;
-
- typedef otb::Image<InputPixelType, Dimension> ImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
-
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
- typedef itk::RescaleIntensityImageFilter<ImageType, OutputImageType> RescalerType;
-
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- RescalerType::Pointer rescaler = RescalerType::New();
-
- const char* filenamereader = argv[1];
- reader->SetFileName(filenamereader);
-
- const char* filenamewriter = argv[2];
- writer->SetFileName(filenamewriter);
-
- int iteration = atoi(argv[3]);
-
- // Energy is computed according to the gradient of the image, thus an
- // \doxygen{itk}{GradientMagnitudeImageFilter} is instantiated
-
- typedef itk::GradientMagnitudeImageFilter<ImageType, ImageType> GradientType;
- GradientType::Pointer gradient = GradientType::New();
-
- // The \doxygen{otb}{ImageToCarvingPathFilter} compute the seam of minimum
- // energy according to lines or columns of the image. Later, as we will
- // choose the best option between the two, we need two of these filters.
-
- typedef otb::ImageToCarvingPathFilter<ImageType, PathType> CarvingFilterType;
- CarvingFilterType::Pointer carvingFilterVert = CarvingFilterType::New();
- CarvingFilterType::Pointer carvingFilterHor = CarvingFilterType::New();
-
- // The \doxygen{otb}{RemoveCarvingPathFilter} will really resize the image
- // deleting the path.
-
- typedef otb::RemoveCarvingPathFilter<ImageType, PathType, ImageType> RemoveCarvingPathFilterType;
- RemoveCarvingPathFilterType::Pointer removeCarvingPath = RemoveCarvingPathFilterType::New();
-
- // As we are going to iterate through the filters, we need to disconnect the
- // pipeline at one point and store the image somewhere. For that purpose, we
- // use an \doxygen{itk}{ImageDuplicator}
-
- typedef itk::ImageDuplicator<ImageType> duplicatorType;
- duplicatorType::Pointer duplicator = duplicatorType::New();
-
- // Now that all elements have been instantiated, we start to plug the pipeline
- // and to define the loop.
-
- reader->Update();
- duplicator->SetInputImage(reader->GetOutput());
- duplicator->Update();
-
- double energyVert, energyHor;
-
- for (int i = 0; i < iteration; ++i)
- {
-
- gradient->SetInput(duplicator->GetOutput());
-
- // Two carving filters processed the gradient image to find the minimum
- // vertical seam and the minimum horizontal seam. Note that the
- // \code{UpdateLargestPossibleRegion()} need to be used as the size of the
- // input image will be different in each loop.
-
- carvingFilterVert->SetInput(gradient->GetOutput());
- carvingFilterVert->SetDirection(0);
- carvingFilterVert->UpdateLargestPossibleRegion();
- energyVert = carvingFilterVert->GetEnergyPerPix();
-
- carvingFilterHor->SetInput(gradient->GetOutput());
- carvingFilterHor->SetDirection(1);
- carvingFilterHor->UpdateLargestPossibleRegion();
- energyHor = carvingFilterHor->GetEnergyPerPix();
-
- // The vertical or the horizontal seam with the minimal energy is chosen.
-
- if (energyVert < energyHor)
- {
- removeCarvingPath->SetInput(duplicator->GetOutput());
- removeCarvingPath->SetInputPath(carvingFilterVert->GetOutput());
- removeCarvingPath->SetDirection(0);
- removeCarvingPath->UpdateLargestPossibleRegion();
- }
- else
- {
- removeCarvingPath->SetInput(duplicator->GetOutput());
- removeCarvingPath->SetInputPath(carvingFilterHor->GetOutput());
- removeCarvingPath->SetDirection(1);
- removeCarvingPath->UpdateLargestPossibleRegion();
- }
-
- // The duplicator filter keep the results for the next loop
-
- duplicator->SetInputImage(removeCarvingPath->GetOutput());
- duplicator->Update();
- }
-
- // Finally, the resulting image is saved on an image file as usual
-
- rescaler->SetInput(duplicator->GetOutput());
- writer->SetInput(rescaler->GetOutput());
- writer->Update();
-
- // Figure~\ref{fig:SEAMCARVING_FILTER} shows the result of applying
- // the seam carving filter to a satellite image.
- // \begin{figure}
- // \center
- // \includegraphics[width=0.44\textwidth]{QB_Suburb.eps}
- // \includegraphics[width=0.38\textwidth]{SeamCarvingExampleOutput.eps}
- // \itkcaption[Seam carving filter application]{Result of applying
- // the \doxygen{otb}{ImageToCarvingPathFilter} followed by the
- // \doxygen{otb}{RemoveCarvingPathFilter} to Quickbird
- // image. From left to right : original image, reduced image removing the 50
- // seams with the lowest energy.}
- // \label{fig:SEAMCARVING_FILTER}
- // \end{figure}
-
- return EXIT_SUCCESS;
-}
diff --git a/Examples/FeatureExtraction/SeamCarvingOtherExample.cxx b/Examples/FeatureExtraction/SeamCarvingOtherExample.cxx
deleted file mode 100644
index f8ac6e4e1b794f09b246ba2105d9dff9333d823b..0000000000000000000000000000000000000000
--- a/Examples/FeatureExtraction/SeamCarvingOtherExample.cxx
+++ /dev/null
@@ -1,172 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-// This example illustrates the use of the \doxygen{otb}{AddCarvingPathFilter},
-// the opposite of the \doxygen{otb}{RemoveCarvingPathFilter}.
-//
-// Here, we use this filter combined with the \doxygen{otb}{DrawPathFilter} to
-// output the image with the removed seam in white.
-//
-// Most of the code is similar to the previous example.
-
-/* Example usage:
-./SeamCarvingOtherExample Input/QB_Suburb.png Output/SeamCarvingOtherExampleOutput.png 50
-*/
-
-
-#include "otbImage.h"
-#include "itkPolyLineParametricPath.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkRescaleIntensityImageFilter.h"
-#include "itkGradientMagnitudeImageFilter.h"
-
-#include "otbDrawPathFilter.h"
-#include "otbImageToCarvingPathFilter.h"
-#include "otbRemoveCarvingPathFilter.h"
-#include "otbAddCarvingPathFilter.h"
-
-#include "itkImageDuplicator.h"
-#include "otbObjectList.h"
-
-int main(int itkNotUsed(argc), char* argv[])
-{
-
- typedef float InputPixelType;
- typedef unsigned char OutputPixelType;
- const unsigned int Dimension = 2;
-
- typedef otb::Image<InputPixelType, Dimension> ImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
-
- // We need to define a list to keep the path in memory until the end of
- // the seam carving process. This is done using an \doxygen{otb}{ObjectList}
-
- typedef otb::ObjectList<PathType> PathListType;
- PathListType::Pointer pathList = PathListType::New();
-
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
- typedef itk::RescaleIntensityImageFilter<ImageType, OutputImageType> RescalerType;
-
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- RescalerType::Pointer rescaler = RescalerType::New();
-
- const char* filenamereader = argv[1];
- reader->SetFileName(filenamereader);
-
- const char* filenamewriter = argv[2];
- writer->SetFileName(filenamewriter);
-
- int iteration = atoi(argv[3]);
-
- // We instantiate the different filters of the pipeline as before.
-
- typedef itk::GradientMagnitudeImageFilter<ImageType, ImageType> GradientType;
- GradientType::Pointer gradient = GradientType::New();
-
- typedef otb::ImageToCarvingPathFilter<ImageType, PathType> CarvingFilterType;
- CarvingFilterType::Pointer carvingFilter = CarvingFilterType::New();
-
- typedef otb::DrawPathFilter<ImageType, PathType, ImageType> DrawPathFilterType;
- DrawPathFilterType::Pointer drawPathFilter = DrawPathFilterType::New();
-
- typedef otb::RemoveCarvingPathFilter<ImageType, PathType, ImageType> RemoveCarvingPathFilterType;
- RemoveCarvingPathFilterType::Pointer removeCarvingPath = RemoveCarvingPathFilterType::New();
-
- typedef otb::AddCarvingPathFilter<ImageType, PathType, ImageType> AddCarvingPathFilterType;
- AddCarvingPathFilterType::Pointer addCarvingPath = AddCarvingPathFilterType::New();
-
- typedef itk::ImageDuplicator<ImageType> duplicatorType;
- duplicatorType::Pointer duplicator = duplicatorType::New();
- reader->Update();
- duplicator->SetInputImage(reader->GetOutput());
- duplicator->Update();
-
- // The loop to shorten the image is similar to the previous one. Here we
- // decide to remove alternatively one vertical and one horizontal seam. At
- // each iteration, we save the seam on the list using the \code{PushBack()}
- // method.
-
- for (int i = 0; i < iteration; ++i)
- {
-
- gradient->SetInput(duplicator->GetOutput());
-
- carvingFilter->SetInput(gradient->GetOutput());
- carvingFilter->SetDirection(i % 2);
-
- removeCarvingPath->SetInput(duplicator->GetOutput());
- removeCarvingPath->SetInputPath(carvingFilter->GetOutput());
- removeCarvingPath->SetDirection(i % 2);
- removeCarvingPath->UpdateLargestPossibleRegion();
-
- pathList->PushBack(carvingFilter->GetOutput());
- carvingFilter->GetOutput()->DisconnectPipeline();
-
- duplicator->SetInputImage(removeCarvingPath->GetOutput());
- duplicator->Update();
- }
-
- // The next loop will put back the seam using the
- // \doxygen{otb}{AddCarvingPathFilter} and drawing it with the
- // \doxygen{otb}{DrawPathFilter}.
-
- for (int i = iteration - 1; i >= 0; i--)
- {
-
- addCarvingPath->SetInput(duplicator->GetOutput());
- addCarvingPath->SetInputPath(pathList->GetNthElement(i));
- addCarvingPath->SetDirection(i % 2);
- addCarvingPath->UpdateLargestPossibleRegion();
-
- drawPathFilter->SetInput(addCarvingPath->GetOutput());
- drawPathFilter->SetInputPath(pathList->GetNthElement(i));
- drawPathFilter->UpdateLargestPossibleRegion();
-
- duplicator->SetInputImage(drawPathFilter->GetOutput());
- duplicator->Update();
- }
-
- // Finally, the resulting image is saved on an image file as usual
-
- rescaler->SetInput(duplicator->GetOutput());
- writer->SetInput(rescaler->GetOutput());
- writer->Update();
-
- // Figure~\ref{fig:SEAMCARVING2_FILTER} shows the result of applying
- // the seam carving filter to a satellite image.
- // \begin{figure}
- // \center
- // \includegraphics[width=0.44\textwidth]{QB_Suburb.eps}
- // \includegraphics[width=0.44\textwidth]{SeamCarvingOtherExampleOutput.eps}
- // \itkcaption[Seam carving filter application]{Illustration of the minimum
- // seams alternatively vertical and horizontal on a Quickbird
- // image. From left to right : original image, image with the 25 vertical
- // seams and the 25 horizontal seams.}
- // \label{fig:SEAMCARVING2_FILTER}
- // \end{figure}
-
- return EXIT_SUCCESS;
-}
diff --git a/Examples/FeatureExtraction/test/CMakeLists.txt b/Examples/FeatureExtraction/test/CMakeLists.txt
index 0f1e957d04e949f5bcf3d51906014e7fc2e0061e..bea835448e0a05ee71769a08dbca9cb19dbef7e4 100644
--- a/Examples/FeatureExtraction/test/CMakeLists.txt
+++ b/Examples/FeatureExtraction/test/CMakeLists.txt
@@ -90,54 +90,6 @@ otb_add_test(NAME feTeRatioLineDetectorExampleTest COMMAND ${OTB_TEST_DRIVER}
5 1
)
-# ------- RoadExtractionExamplesTest----------
-
-
-otb_add_test(NAME feTeExtractRoadByStepsExampleTest COMMAND ${OTB_TEST_DRIVER}
- --compare-n-images ${NOTOL} 2
- ${BASELINE}/qb_ExtractRoad_pretty.png
- ${TEMP}/qb_ExtractRoad_pretty.png
- ${BASELINE}/ExtractRoadByStepsExampleOutput.png
- ${TEMP}/ExtractRoadByStepsExampleOutput.png
- Execute $<TARGET_FILE:ExtractRoadByStepsExample>
- ${INPUTDATA}/qb_RoadExtract.tif
- ${TEMP}/ExtractRoadByStepsExampleOutput.png
- ${TEMP}/qb_ExtractRoad_pretty.png
- 337 557 432 859 0.00005 1.0
-)
-
-
-otb_add_test(NAME feTeExtractRoadExampleTest COMMAND ${OTB_TEST_DRIVER}
- --compare-image ${NOTOL}
- ${BASELINE}/ExtractRoadExampleOutput.png
- ${TEMP}/ExtractRoadExampleOutput.png
- Execute $<TARGET_FILE:ExtractRoadExample>
- ${INPUTDATA}/qb_RoadExtract.tif
- ${TEMP}/ExtractRoadExampleOutput.png
- 337 557 432 859 1.0 0.00005 1.0 0.39269 1.0 10.0 25.
-)
-
-# ------- SeamCarvingExamplesTest----------
-
-otb_add_test(NAME feTeSeamCarvingExampleTest COMMAND ${OTB_TEST_DRIVER}
- --compare-image ${NOTOL}
- ${BASELINE}/SeamCarvingExampleOutput.png
- ${TEMP}/SeamCarvingExampleOutput.png
- Execute $<TARGET_FILE:SeamCarvingExample>
- ${INPUTDATA}/QB_Suburb.png
- ${TEMP}/SeamCarvingExampleOutput.png
- 50
-)
-
-otb_add_test(NAME feTeSeamCarvingOtherExampleTest COMMAND ${OTB_TEST_DRIVER}
- --compare-image ${NOTOL}
- ${BASELINE}/SeamCarvingOtherExampleOutput.png
- ${TEMP}/SeamCarvingOtherExampleOutput.png
- Execute $<TARGET_FILE:SeamCarvingOtherExample>
- ${INPUTDATA}/QB_Suburb.png
- ${TEMP}/SeamCarvingOtherExampleOutput.png
- 50
-)
#otb_add_test(NAME feTeImageToSIFTKeyPointSetFilterTest COMMAND ${OTB_TEST_DRIVER}
# --compare-image ${NOTOL}
diff --git a/Examples/OBIA/LabelMapToVectorData.cxx b/Examples/OBIA/LabelMapToVectorData.cxx
index 001d38ecf9d139292dbcf9ffda681be03a85e87c..2f2a1423404845c1fd60146b0e0ae5524472ee87 100644
--- a/Examples/OBIA/LabelMapToVectorData.cxx
+++ b/Examples/OBIA/LabelMapToVectorData.cxx
@@ -20,7 +20,7 @@
/* Example usage:
-./LabelMapToVectorData Input/rcc8_mire1.png Output/rcc8_mire2_vectorizer.shp
+./LabelMapToVectorData Input/labelImage_UnsignedChar.tif Output/LabelMapToVectorData.shp
*/
diff --git a/Examples/OBIA/test/CMakeLists.txt b/Examples/OBIA/test/CMakeLists.txt
index 49cb2f872e107f61111f8f8de573c974f6c1badb..563fdaf61883ef675fe38633608791d02554e5d8 100644
--- a/Examples/OBIA/test/CMakeLists.txt
+++ b/Examples/OBIA/test/CMakeLists.txt
@@ -42,6 +42,6 @@ set(INPUTDATA ${OTB_DATA_ROOT}/Input)
otb_add_test(NAME trTeLabelMapToVectorData COMMAND ${OTB_TEST_DRIVER}
Execute $<TARGET_FILE:LabelMapToVectorData>
- ${INPUTDATA}/rcc8_mire1.png
- ${TEMP}/rcc8_mire2_vectorizer.shp
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
+ ${TEMP}/trTeLabelMapToVectorDataOutput.shp
)
diff --git a/Examples/Projections/OrthoRectificationExample.cxx b/Examples/Projections/OrthoRectificationExample.cxx
index 93bfecc1681ac8d3c5093c9f74664ca97c50c369..e3a2f4d1c5cdaf2a682c9b2bbc516f970134aba5 100644
--- a/Examples/Projections/OrthoRectificationExample.cxx
+++ b/Examples/Projections/OrthoRectificationExample.cxx
@@ -23,7 +23,7 @@
#include "otbImageFileWriter.h"
// This example demonstrates the use of the
-// \doxygen{otb}{OrthoRectificationFilter}. This filter is intended to
+// \doxygen{otb}{GenericRSResampleImageFilter}. This filter is intended to
// orthorectify images which are in a distributor format with the
// appropriate meta-data describing the sensor model. In this example,
// we will choose to use an UTM projection for the output image.
@@ -32,7 +32,7 @@
// proper header files: the one for the ortho-rectification filter and
// the one defining the different projections available in OTB.
-#include "otbOrthoRectificationFilter.h"
+#include "otbGenericRSResampleImageFilter.h"
#include "otbSpatialReference.h"
int main(int argc, char* argv[])
@@ -66,15 +66,12 @@ int main(int argc, char* argv[])
writer->SetFileName(argv[2]);
// We can now proceed to declare the type for the ortho-rectification
- // filter. The class \doxygen{otb}{OrthoRectificationFilter} is
- // templated over the input and the output image types as well as over
- // the cartographic projection. We define therefore the
- // type of the projection we want, which is an UTM projection for this case.
-
-// Software Guide : BeginCodeSnippet
- typedef otb::GenericMapProjection<otb::TransformDirection::FORWARD> MapProjectionType;
- typedef otb::OrthoRectificationFilter<VectorImageType, VectorImageType,
- MapProjectionType>
+ // filter. The class \doxygen{otb}{GenericRSResampleImageFilter} is
+ // templated over the input and the output image types.
+
+ // Software Guide : BeginCodeSnippet
+
+ typedef otb::GenericRSResampleImageFilter<VectorImageType, VectorImageType>
OrthoRectifFilterType;
OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
@@ -83,10 +80,9 @@ int main(int argc, char* argv[])
// instantiate the map projection, set the {\em zone} and {\em hemisphere}
// parameters and pass this projection to the orthorectification filter.
- MapProjectionType::Pointer utmMapProjection = MapProjectionType::New();
- utmMapProjection->SetWkt(otb::SpatialReference::FromUTM(atoi(argv[3]),*argv[4]=='N'? otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt());
- std::cout<<utmMapProjection->GetWkt()<<std::endl;
- orthoRectifFilter->SetMapProjection(utmMapProjection);
+ std::string wkt = otb::SpatialReference::FromUTM(atoi(argv[3]),*argv[4]=='N'? otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt();
+ std::cout<<wkt<<std::endl;
+ orthoRectifFilter->SetOutputProjectionRef(wkt);
// We then wire the input image to the orthorectification filter.
@@ -129,8 +125,6 @@ int main(int argc, char* argv[])
writer->SetInput(orthoRectifFilter->GetOutput());
- writer->SetAutomaticTiledStreaming();
-
// Finally, we trigger the pipeline execution by calling the
// \code{Update()} method on the writer. Please note that the
// ortho-rectification filter is derived from the
diff --git a/Examples/Tutorials/OrthoFusion.cxx b/Examples/Tutorials/OrthoFusion.cxx
index a94f608086de60b7907003cecca3822fee7ce8e4..c0ead29574f94efba0267646cbeea59af4162b45 100644
--- a/Examples/Tutorials/OrthoFusion.cxx
+++ b/Examples/Tutorials/OrthoFusion.cxx
@@ -28,8 +28,7 @@
#include "otbImageFileReader.h"
#include "otbImageFileWriter.h"
-#include "otbOrthoRectificationFilter.h"
-#include "otbGenericMapProjection.h"
+#include "otbGenericRSResampleImageFilter.h"
#include "otbSimpleRcsPanSharpeningFusionImageFilter.h"
#include "otbStandardFilterWatcher.h"
@@ -89,12 +88,9 @@ int main(int argc, char* argv[])
// \item the hemisphere
// \end{itemize}
- typedef otb::GenericMapProjection<otb::TransformDirection::INVERSE> InverseProjectionType;
- InverseProjectionType::Pointer utmMapProjection = InverseProjectionType::New();
- utmMapProjection->SetWkt(
- otb::SpatialReference::FromUTM(atoi(argv[4]),argv[5][0]=='N' ?
+ std::string wkt = otb::SpatialReference::FromUTM(atoi(argv[4]),argv[5][0]=='N' ?
otb::SpatialReference::hemisphere::north :
- otb::SpatialReference::hemisphere::south).ToWkt());
+ otb::SpatialReference::hemisphere::south).ToWkt();
// We will need to pass several parameters to the orthorectification
// concerning the desired output region:
@@ -118,10 +114,10 @@ int main(int argc, char* argv[])
// We declare the orthorectification filter. And provide the different
// parameters:
- typedef otb::OrthoRectificationFilter<ImageType, DoubleImageType, InverseProjectionType> OrthoRectifFilterType;
+ typedef otb::GenericRSResampleImageFilter<ImageType, DoubleImageType> OrthoRectifFilterType;
OrthoRectifFilterType::Pointer orthoRectifPAN = OrthoRectifFilterType::New();
- orthoRectifPAN->SetMapProjection(utmMapProjection);
+ orthoRectifPAN->SetOutputProjectionRef(wkt);
orthoRectifPAN->SetInput(readerPAN->GetOutput());
@@ -133,12 +129,12 @@ int main(int argc, char* argv[])
// Now we are able to have the orthorectified area from the PAN image. We just
// have to follow a similar process for the XS image.
- typedef otb::OrthoRectificationFilter<VectorImageType, DoubleVectorImageType, InverseProjectionType> VectorOrthoRectifFilterType;
+ typedef otb::GenericRSResampleImageFilter<VectorImageType, DoubleVectorImageType> VectorOrthoRectifFilterType;
VectorOrthoRectifFilterType::Pointer orthoRectifXS = VectorOrthoRectifFilterType::New();
- orthoRectifXS->SetMapProjection(utmMapProjection);
+ orthoRectifXS->SetOutputProjectionRef(wkt);
orthoRectifXS->SetInput(readerXS->GetOutput());
@@ -160,8 +156,6 @@ int main(int argc, char* argv[])
writer->SetInput(fusion->GetOutput());
- writer->SetAutomaticTiledStreaming();
-
otb::StandardFilterWatcher watcher(writer, "OrthoFusion");
writer->Update();
diff --git a/Modules/Applications/AppClassification/app/CMakeLists.txt b/Modules/Applications/AppClassification/app/CMakeLists.txt
index b646618959248fab615337a300a67a254f1337b5..50ac00ea1619c068da99774d0010ee532a5b7fd1 100644
--- a/Modules/Applications/AppClassification/app/CMakeLists.txt
+++ b/Modules/Applications/AppClassification/app/CMakeLists.txt
@@ -48,11 +48,6 @@ otb_create_application(
SOURCES otbFusionOfClassifications.cxx
LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-otb_create_application(
- NAME ComputePolylineFeatureFromImage
- SOURCES otbComputePolylineFeatureFromImage.cxx
- LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-
if(OTB_USE_SHARK)
otb_create_application(
NAME KMeansClassification
@@ -75,11 +70,6 @@ otb_create_application(
SOURCES otbPredictRegression.cxx
LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-otb_create_application(
- NAME DSFuzzyModelEstimation
- SOURCES otbDSFuzzyModelEstimation.cxx
- LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-
otb_create_application(
NAME ClassificationMapRegularization
SOURCES otbClassificationMapRegularization.cxx
@@ -95,11 +85,6 @@ otb_create_application(
SOURCES otbComputeImagesStatistics.cxx
LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-otb_create_application(
- NAME VectorDataDSValidation
- SOURCES otbVectorDataDSValidation.cxx
- LINK_LIBRARIES ${${otb-module}_LIBRARIES})
-
otb_create_application(
NAME PolygonClassStatistics
SOURCES otbPolygonClassStatistics.cxx
diff --git a/Modules/Applications/AppClassification/app/otbComputePolylineFeatureFromImage.cxx b/Modules/Applications/AppClassification/app/otbComputePolylineFeatureFromImage.cxx
deleted file mode 100644
index 919ad16354ffb3fbed8b08585e2d5c562c044955..0000000000000000000000000000000000000000
--- a/Modules/Applications/AppClassification/app/otbComputePolylineFeatureFromImage.cxx
+++ /dev/null
@@ -1,282 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include <iostream>
-
-#include "otbVectorImage.h"
-
-#include "otbWrapperApplicationFactory.h"
-
-
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataFileWriter.h"
-#include "itkPreOrderTreeIterator.h"
-
-#include "otbVectorDataIntoImageProjectionFilter.h"
-#include "otbVectorDataTransformFilter.h"
-#include "itkAffineTransform.h"
-
-#include "otbParserConditionDataNodeFeatureFunction.h"
-#include "otbNDVIDataNodeFeatureFunction.h"
-
-// Elevation handler
-#include "otbWrapperElevationParametersHandler.h"
-
-namespace otb
-{
-namespace Wrapper
-{
-
-class ComputePolylineFeatureFromImage: public Application
-{
-public:
- /** Standard class typedefs. */
- typedef ComputePolylineFeatureFromImage Self;
- typedef Application Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- // Images
- typedef FloatVectorImageType::PixelType PixelType;
- typedef FloatVectorImageType ImageType;
-
- // VectorData
- typedef VectorData<> VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef DataNodeType::ValuePrecisionType PrecisionType;
- typedef DataNodeType::PrecisionType CoordRepType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType> TreeIteratorType;
- typedef VectorDataIntoImageProjectionFilter<VectorDataType, ImageType> VectorDataIntoImageProjType;
- typedef VectorDataProjectionFilter<VectorDataType, VectorDataType> VectorDataProjectionFilterType;
-
- typedef ParserConditionDataNodeFeatureFunction<ImageType, CoordRepType, PrecisionType>
- ParserConditionFeatureFunctionType;
-
- /** Standard macro */
- itkNewMacro(Self)
-;
-
- itkTypeMacro(ComputePolylineFeatureFromImage, otb::Application)
-;
-
-private:
- void DoInit() override
- {
- SetName("ComputePolylineFeatureFromImage");
- SetDescription("This application computes the chosen descriptors for each studied polyline contained in the input VectorData.");
-
- SetDocName("Compute Polyline Feature From Image");
- SetDocLongDescription("The first step in the classifier fusion based validation is to compute the chosen descriptors for each studied polyline.");
- SetDocLimitations("Since it does not rely on streaming process, take care of the size of input image before launching application.");
- SetDocAuthors("OTB-Team");
- SetDocSeeAlso(" ");
- AddDocTag(Tags::FeatureExtraction);
-
- AddParameter(ParameterType_InputImage, "in", "Input Image");
- SetParameterDescription("in", "An image to compute the descriptors on.");
-
- AddParameter(ParameterType_InputVectorData, "vd", "Vector Data");
- SetParameterDescription("vd", "Vector data containing the polylines where the features will be computed.");
-
- // Elevation
- ElevationParametersHandler::AddElevationParameters(this, "elev");
-
- AddParameter(ParameterType_String, "expr", "Feature expression");
- SetParameterDescription("expr", "The feature formula (b1 < 0.3) where b1 is the standard name of input image first band");
-
- AddParameter(ParameterType_String, "field", "Feature name");
- SetParameterDescription("field", "The field name corresponding to the feature codename (NONDVI, ROADSA...)");
-
- AddParameter(ParameterType_OutputVectorData, "out", "Output Vector Data");
- SetParameterDescription("out", "The output vector data containing polylines with a new field");
-
- // Doc example parameter settings
- SetDocExampleParameterValue("in", "NDVI.TIF");
- SetDocExampleParameterValue("vd", "roads_ground_truth.shp");
- SetDocExampleParameterValue("expr", "\"(b1 > 0.4)\"");
- SetDocExampleParameterValue("field", "NONDVI");
- SetDocExampleParameterValue("out", "PolylineFeatureFromImage_LI_NONDVI_gt.shp");
-
- SetOfficialDocLink();
- }
-
- void DoUpdateParameters() override
- {
- // Nothing to do here : all parameters are independent
- }
-
- void DoExecute() override
- {
- // Vector Data into Image projection
- FloatVectorImageType::Pointer inImage = GetParameterImage("in");
-
- inImage->UpdateOutputInformation();
- try
- {
- inImage->Update();
- }
- catch (...)
- {
- itkGenericExceptionMacro(<< "Error during image update, maybe your image is to big.");
- }
-
- otbAppLogDEBUG( << "Starting PolylineFeature extraction process" )
-
- // Vector Data into Image projection
- //// Read the Vectordata
-
- VectorDataType* inVectorData = GetParameterVectorData("vd");
- inVectorData->Update();
- //// Projection
- VectorDataIntoImageProjType::Pointer vprojIm = VectorDataIntoImageProjType::New();
- vprojIm->SetInputVectorData(inVectorData);
- vprojIm->SetInputImage(inImage);
-
- // Setup the DEM Handler
- otb::Wrapper::ElevationParametersHandler::SetupDEMHandlerFromElevationParameters(this,"elev");
-
- vprojIm->SetUseOutputSpacingAndOriginFromImage(true); // we want index as input;
- vprojIm->Update();
-
- // Add description
- ParserConditionFeatureFunctionType::Pointer vdescriptor = ParserConditionFeatureFunctionType::New();
- vdescriptor->SetExpression(GetParameterString("expr"));
- vdescriptor->SetInputImage(inImage);
-
- m_OutVectorData = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = m_OutVectorData->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- m_OutVectorData->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- m_OutVectorData->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vprojIm->GetOutput()->GetDataTree());
- itVector.GoToBegin();
-
- while (!itVector.IsAtEnd())
- {
- vdescriptor->SetInputImage(inImage);
- if (!itVector.Get()->IsRoot() && !itVector.Get()->IsDocument() && !itVector.Get()->IsFolder())
- {
- DataNodeType::Pointer currentGeometry = itVector.Get();
- currentGeometry->SetFieldAsDouble(GetParameterString("field"),
- (double) (vdescriptor->Evaluate(*(currentGeometry.GetPointer()))[0]));
- m_OutVectorData->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- /*
- * Reprojection of the output VectorData
- *
- * The output of VectorDataToRoadDescription is in image index coordinates
- *
- * 3 cases :
- * - input image has no geo-information : pass through
- * - input image is in cartographic projection : apply image spacing and origin, and set the ProjectionRef
- * - input image is in sensor model geometry : reproject in WGS84
- *
- */
-
- std::string projRef = inImage->GetProjectionRef();
- ImageKeywordlist kwl;
- itk::ExposeMetaData<ImageKeywordlist>(inImage->GetMetaDataDictionary(), MetaDataKey::OSSIMKeywordlistKey, kwl);
-
- if (!projRef.empty())
- {
- // image is in cartographic projection
- // apply spacing and origin + set projection WKT
- // The VectorData in output of the chain is in image index coordinate,
- // and the projection information is lost
- // Apply an affine transform to apply image origin and spacing,
- // and arbitrarily set the ProjectionRef to the input image ProjectionRef
-
- typedef itk::AffineTransform<VectorDataType::PrecisionType, 2> TransformType;
- typedef otb::VectorDataTransformFilter<VectorDataType, VectorDataType> VDTransformType;
-
- TransformType::ParametersType params;
- params.SetSize(6);
- params[0] = inImage->GetSignedSpacing()[0];
- params[1] = 0;
- params[2] = 0;
- params[3] = inImage->GetSignedSpacing()[1];
- params[4] = inImage->GetOrigin()[0];
- params[5] = inImage->GetOrigin()[1];
-
- TransformType::Pointer transform = TransformType::New();
- transform->SetParameters(params);
-
- VDTransformType::Pointer vdTransform = VDTransformType::New();
- vdTransform->SetTransform(transform);
- vdTransform->SetInput(m_OutVectorData);
- vdTransform->Update();
-
- m_ProjectedVectorData = vdTransform->GetOutput();
-
- m_ProjectedVectorData->SetProjectionRef(inImage->GetProjectionRef());
- }
- else
- if (kwl.GetSize() > 0)
- {
- // image is in sensor model geometry
-
- // Reproject VectorData in image projection
- VectorDataProjectionFilterType::Pointer vproj = VectorDataProjectionFilterType::New();
- vproj->SetInput(m_OutVectorData);
-
- vproj->SetOutputKeywordList(inImage->GetImageKeywordlist());
- vproj->SetOutputProjectionRef(inImage->GetProjectionRef());
- vproj->SetOutputOrigin(inImage->GetOrigin());
- vproj->SetOutputSpacing(inImage->GetSignedSpacing());
-
- // Setup the DEM Handler
- otb::Wrapper::ElevationParametersHandler::SetupDEMHandlerFromElevationParameters(this,"elev");
-
- vproj->Update();
- m_ProjectedVectorData = vproj->GetOutput();
- }
- else
- {
- // no georeferencing information
- m_ProjectedVectorData = m_OutVectorData;
- }
-
- // Set the output vectorData
- SetParameterOutputVectorData("out", m_ProjectedVectorData);
-
- };
-
- VectorDataType::Pointer m_ProjectedVectorData;
- VectorDataType::Pointer m_OutVectorData;
-
-};
-
-}
-}
-
-OTB_APPLICATION_EXPORT(otb::Wrapper::ComputePolylineFeatureFromImage)
-
-
diff --git a/Modules/Applications/AppClassification/app/otbDSFuzzyModelEstimation.cxx b/Modules/Applications/AppClassification/app/otbDSFuzzyModelEstimation.cxx
deleted file mode 100644
index 2804718d78036f2a3c21a8c1661a948b2538b8a4..0000000000000000000000000000000000000000
--- a/Modules/Applications/AppClassification/app/otbDSFuzzyModelEstimation.cxx
+++ /dev/null
@@ -1,451 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#include <iostream>
-
-#include "otbWrapperApplication.h"
-#include "otbWrapperApplicationFactory.h"
-#include "otbWrapperStringListParameter.h"
-#include "otbImageToEnvelopeVectorDataFilter.h"
-#include "otbVectorDataToRandomLineGenerator.h"
-#include "itkAmoebaOptimizer.h"
-#include "otbStandardDSCostFunction.h"
-
-
-namespace otb
-{
-
-namespace Wrapper
-{
-
-#include "itkCommand.h"
-class CommandIterationUpdate : public itk::Command
-{
-public:
-typedef CommandIterationUpdate Self;
-typedef itk::Command Superclass;
-typedef itk::SmartPointer<Self> Pointer;
-itkNewMacro( Self );
-protected:
-CommandIterationUpdate() {};
-public:
-typedef itk::AmoebaOptimizer OptimizerType;
-typedef const OptimizerType * OptimizerPointer;
-
-
-void Execute(itk::Object *caller, const itk::EventObject & event) override
-{
- Execute( (const itk::Object *)caller, event);
-}
-
-void Execute(const itk::Object * object, const itk::EventObject & event) override
-{
- OptimizerPointer optimizer =
- dynamic_cast< OptimizerPointer >( object );
- if( ! itk::IterationEvent().CheckEvent( &event ) )
- {
- return;
- }
- std::ostringstream message;
- message << optimizer->GetCachedValue() << " ";
- message << optimizer->GetCachedCurrentPosition() << std::endl;
- std::cout<<message.str()<<std::endl;
-}
-
-
-};
-
-
-class DSFuzzyModelEstimation: public Application
-{
-public:
- /** Standard class typedefs. */
- typedef DSFuzzyModelEstimation Self;
- typedef Application Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- typedef VectorData<double> VectorDataType;
-
- typedef VectorDataType::DataTreeType DataTreeType;
- typedef VectorDataType::DataNodeType DataNodeType;
-
- typedef VectorDataType::ValuePrecisionType PrecisionType;
- typedef VectorDataType::PrecisionType CoordRepType;
-
- typedef otb::Wrapper::StringListParameter::StringListType StringListType;
-
- typedef otb::VectorDataToDSValidatedVectorDataFilter<VectorDataType, PrecisionType>
- ValidationFilterType;
- typedef otb::StandardDSCostFunction<ValidationFilterType> CostFunctionType;
- typedef CostFunctionType::LabelSetType LabelSetType;
-
- typedef itk::AmoebaOptimizer OptimizerType;
-
- typedef otb::FuzzyDescriptorsModelManager::DescriptorsModelType
- DescriptorsModelType;
- typedef otb::FuzzyDescriptorsModelManager::DescriptorListType
- DescriptorListType;
-
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType>
- TreeIteratorType;
-
-
- /** Standard macro */
- itkNewMacro(Self);
-
- itkTypeMacro(DSFuzzyModelEstimation, otb::Application);
-
-private:
- void DoInit() override
- {
- SetName("DSFuzzyModelEstimation");
- SetDescription("Estimate feature fuzzy model parameters using 2 vector data (ground truth samples and wrong samples).");
-
- SetDocName("Fuzzy Model estimation");
- SetDocLongDescription("Estimate feature fuzzy model parameters using 2 vector data (ground truth samples and wrong samples).");
- SetDocLimitations("None.");
- SetDocAuthors("OTB-Team");
- SetDocSeeAlso(" ");
-
- AddDocTag(Tags::FeatureExtraction);
-
- AddParameter(ParameterType_InputVectorData, "psin", "Input Positive Vector Data");
- SetParameterDescription("psin", "Ground truth vector data for positive samples");
-
- AddParameter(ParameterType_InputVectorData, "nsin", "Input Negative Vector Data");
- SetParameterDescription("nsin", "Ground truth vector data for negative samples");
-
- AddParameter(ParameterType_StringList, "belsup", "Belief Support");
- SetParameterDescription("belsup", "Dempster Shafer study hypothesis to compute belief");
-
- AddParameter(ParameterType_StringList, "plasup", "Plausibility Support");
- SetParameterDescription("plasup", "Dempster Shafer study hypothesis to compute plausibility");
-
- AddParameter(ParameterType_OutputFilename, "out", "Output filename");
- SetParameterDescription("out", "Output model file name (xml file) contains the optimal model to perform information fusion.");
-
- AddParameter(ParameterType_String, "cri", "Criterion");
- SetParameterDescription("cri", "Dempster Shafer criterion (by default (belief+plausibility)/2)");
- MandatoryOff("cri");
- SetParameterString("cri","((Belief + Plausibility)/2.)");
-
- AddParameter(ParameterType_Float,"wgt","Weighting");
- SetParameterDescription("wgt","Coefficient between 0 and 1 to promote undetection or false detections (default 0.5)");
- MandatoryOff("wgt");
- SetParameterFloat("wgt",0.5);
-
- AddParameter(ParameterType_InputFilename,"initmod","initialization model");
- SetParameterDescription("initmod","Initialization model (xml file) to be used. If the xml initialization model is set, the descriptor list is not used (specified using the option -desclist)");
- MandatoryOff("initmod");
-
- AddParameter(ParameterType_StringList, "desclist","Descriptor list");
- SetParameterDescription("desclist","List of the descriptors to be used in the model (must be specified to perform an automatic initialization)");
- MandatoryOff("desclist");
-
- AddParameter(ParameterType_Int,"maxnbit","Maximum number of iterations");
- MandatoryOff("maxnbit");
- SetParameterDescription("maxnbit","Maximum number of optimizer iteration (default 200)");
- SetParameterInt("maxnbit",200);
-
- AddParameter(ParameterType_Bool,"optobs","Optimizer Observer");
- SetParameterDescription("optobs","Activate the optimizer observer");
-
- // Doc example parameter settings
- SetDocExampleParameterValue("psin", "cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp");
- SetDocExampleParameterValue("nsin", "cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp");
- SetDocExampleParameterValue("belsup", "\"ROADSA\"");
- SetDocExampleParameterValue("plasup", "\"NONDVI\" \"ROADSA\" \"NOBUIL\"");
- SetDocExampleParameterValue("initmod", "Dempster-Shafer/DSFuzzyModel_Init.xml");
- SetDocExampleParameterValue("maxnbit", "4");
- SetDocExampleParameterValue("optobs", "true");
- SetDocExampleParameterValue("out", "DSFuzzyModelEstimation.xml");
-
- SetOfficialDocLink();
- }
-
- void DoUpdateParameters() override
- {
- // Nothing to do here : all parameters are independent
-
-
- // .. //
-
-
- }
-
- void DoExecute() override
- {
-
- //Instantiate
- m_CostFunction = CostFunctionType::New();
- m_Optimizer = OptimizerType::New();
-
- //Read the vector datas
- VectorDataType::Pointer psVectorData = GetParameterVectorData("psin");
- psVectorData->Update();
- VectorDataType::Pointer nsVectorData = GetParameterVectorData("nsin");
- nsVectorData->Update();
-
- // Load the initial descriptor model
- DescriptorListType descList;
- DescriptorsModelType descMod;
- if (IsParameterEnabled("initmod"))
- {
- std::string descModFile = GetParameterString("initmod");
- descMod = FuzzyDescriptorsModelManager::Read(descModFile);
- descList = FuzzyDescriptorsModelManager::GetDescriptorList(descMod);
- }
- else
- {
- StringListType stringList = GetParameterStringList("desclist");
- int nbsdDesc = stringList.size();
- for (int i = 0; i < nbsdDesc; i++)
- {
- descList.push_back(stringList[i]);
- }
- }
-
- m_CostFunction->SetDescriptorList(descList);
-
- // Compute statistics of all the descriptors
-
- std::vector<double> accFirstOrderPS, accSecondOrderPS, minPS, maxPS;
- accFirstOrderPS.resize(descList.size());
- accSecondOrderPS.resize(descList.size());
- std::fill(accFirstOrderPS.begin(), accFirstOrderPS.end(), 0);
- std::fill(accSecondOrderPS.begin(), accSecondOrderPS.end(), 0);
- minPS.resize(descList.size());
- maxPS.resize(descList.size());
- unsigned int accNbElemPS = 0;
-
- TreeIteratorType itVectorPS(psVectorData->GetDataTree());
- for (itVectorPS.GoToBegin(); !itVectorPS.IsAtEnd(); ++itVectorPS)
- {
- if (!itVectorPS.Get()->IsRoot() && !itVectorPS.Get()->IsDocument() && !itVectorPS.Get()->IsFolder())
- {
- DataNodeType::Pointer currentGeometry = itVectorPS.Get();
-
- for (unsigned int i = 0; i < descList.size(); ++i)
- {
- double desc = currentGeometry->GetFieldAsDouble(descList[i]);
-
- accFirstOrderPS[i] += desc;
- accSecondOrderPS[i] += desc * desc;
-
- if (desc < minPS[i])
- {
- minPS[i] = desc;
- }
- if (desc > maxPS[i])
- {
- maxPS[i] = desc;
- }
-
- }
- accNbElemPS++;
- }
- }
- if (accNbElemPS == 0)
- {
- otbAppLogFATAL(<< "Error : no element found in positive vector data!");
- }
-
- TreeIteratorType itVectorNS(nsVectorData->GetDataTree());
- std::vector<double> accFirstOrderNS, accSecondOrderNS, minNS, maxNS;
- minNS.resize(descList.size());
- maxNS.resize(descList.size());
- accFirstOrderNS.resize(descList.size());
- accSecondOrderNS.resize(descList.size());
- std::fill(accFirstOrderNS.begin(), accFirstOrderNS.end(), 0);
- std::fill(accSecondOrderNS.begin(), accSecondOrderNS.end(), 0);
- std::fill(minNS.begin(), minNS.end(), 1);
- std::fill(maxNS.begin(), maxNS.end(), 0);
- unsigned int accNbElemNS = 0;
-
- for (itVectorNS.GoToBegin(); !itVectorNS.IsAtEnd(); ++itVectorNS)
- {
- if (!itVectorNS.Get()->IsRoot() && !itVectorNS.Get()->IsDocument() && !itVectorNS.Get()->IsFolder())
- {
- DataNodeType::Pointer currentGeometry = itVectorNS.Get();
-
- for (unsigned int i = 0; i < descList.size(); ++i)
- {
- double desc = currentGeometry->GetFieldAsDouble(descList[i]);
-
- accFirstOrderNS[i] += desc;
- accSecondOrderNS[i] += desc * desc;
-
- if (desc < minNS[i])
- {
- minNS[i] = desc;
- }
- if (desc > maxNS[i])
- {
- maxNS[i] = desc;
- }
-
- }
- accNbElemNS++;
- }
- }
- if (accNbElemNS == 0)
- {
- otbAppLogFATAL(<< "Error : no element found in negative vector data!");
- }
- otbAppLogINFO( << "Descriptors Stats : ");
- otbAppLogINFO( << "Positive Samples");
- for (unsigned int i = 0; i < descList.size(); ++i)
- {
- double mean = accFirstOrderPS[i] / accNbElemPS;
- double stddev = std::sqrt(accSecondOrderPS[i] / accNbElemPS - mean * mean);
- otbAppLogINFO( << descList[i] << " : " << mean << " +/- " << stddev << " (min: " << minPS[i] << " max: " << maxPS[i] << ")"<< std::endl);
- }
-
- otbAppLogINFO( << "Negative Samples" << std::endl);
- for (unsigned int i = 0; i < descList.size(); ++i)
- {
- double mean = accFirstOrderNS[i] / accNbElemNS;
- double stddev = std::sqrt(accSecondOrderNS[i] / accNbElemNS - mean * mean);
- otbAppLogINFO(<< descList[i] << " : " << mean << " +/- " << stddev << " (min: " << minNS[i] << " max: " << maxNS[i] << ")"<< std::endl);
- }
-
- OptimizerType::ParametersType initialPosition(4 * descList.size());
-
- if (IsParameterEnabled("initmod"))
- {
-
- for (unsigned int i = 0; i < 4; i++)
- {
- for (unsigned int j = 0; j < descList.size(); j++)
- {
- initialPosition.SetElement(
- i + 4 * j,
- otb::FuzzyDescriptorsModelManager::GetDescriptor(descList[j].c_str(), descMod).second[i]);
- }
- }
- }
- else
- {
- for (unsigned int j = 0; j < descList.size(); j++)
- {
- initialPosition.SetElement((j * 4), std::min(minNS[j], maxPS[j]));
- initialPosition.SetElement((j * 4) + 2, std::max(minNS[j], maxPS[j]));
- initialPosition.SetElement(
- (j * 4) + 1,
- 0.5
- * (initialPosition.GetElement((j * 4)) + initialPosition.GetElement((j * 4) + 2)));
- initialPosition.SetElement((j * 4) + 3, 0.95);
- }
- }
-
- otbAppLogINFO(<<"Initial model: "<<initialPosition);
-
- //Cost Function
- //Format Hypothesis
- LabelSetType Bhyp, Phyp;
- int nbSet;
-
- StringListType stringList = GetParameterStringList("belsup");
- nbSet = stringList.size();
-
- for (int i = 0; i < nbSet; i++)
- {
- std::string str = stringList[i];
- Bhyp.insert(str);
- }
- m_CostFunction->SetBeliefHypothesis(Bhyp);
- stringList = GetParameterStringList("plasup");
- nbSet = stringList.size();
- for (int i = 0; i < nbSet; i++)
- {
- std::string str = stringList[i];
- Phyp.insert(str);
- }
- m_CostFunction->SetPlausibilityHypothesis(Phyp);
-
- m_CostFunction->SetWeight(GetParameterFloat("wgt"));
-
- m_CostFunction->SetCriterionFormula(GetParameterString("cri"));
-
- m_CostFunction->SetGTVectorData(psVectorData);
- m_CostFunction->SetNSVectorData(nsVectorData);
- //Optimizer
- m_Optimizer->SetCostFunction(m_CostFunction);
-
- m_Optimizer->SetMaximumNumberOfIterations(GetParameterInt("maxnbit"));
-
- OptimizerType::ParametersType simplexDelta(m_CostFunction->GetNumberOfParameters());
- simplexDelta.Fill(0.1);
-
- m_Optimizer->AutomaticInitialSimplexOff();
- m_Optimizer->SetInitialSimplexDelta(simplexDelta);
-
- m_Optimizer->SetInitialPosition(initialPosition);
-
- // Create the Command observer and register it with the optimizer.
- CommandIterationUpdate::Pointer observer = CommandIterationUpdate::New();
- if (GetParameterInt("optobs"))
- {
- m_Optimizer->AddObserver(itk::IterationEvent(), observer);
- }
-
- try
- {
- // do the optimization
- m_Optimizer->StartOptimization();
- }
- catch (itk::ExceptionObject& err)
- {
- // An error has occurred in the optimization.
- // Update the parameters
- otbAppLogFATAL("ERROR: Exception Caught : "<< err.GetDescription() << std::endl
- << "numberOfIterations : " << m_Optimizer->GetOptimizer()->get_num_evaluations() << std::endl
- << "Results : " << m_Optimizer->GetCurrentPosition() << std::endl);
- }
- // get the results
- const unsigned int numberOfIterations = m_Optimizer->GetOptimizer()->get_num_evaluations();
- otbAppLogINFO("numberOfIterations : " << numberOfIterations << std::endl);
- otbAppLogINFO("Results : " << m_Optimizer->GetCurrentPosition() << std::endl);
-
- for (unsigned int i = 0; i < descList.size(); i++)
- {
- otb::FuzzyDescriptorsModelManager::ParameterType tmpParams;
- for (unsigned int j = 0; j < 4; j++)
- {
- tmpParams.push_back(m_Optimizer->GetCurrentPosition()[(i * 4) + j]);
- }
- otb::FuzzyDescriptorsModelManager::AddDescriptor(descList[i], tmpParams, m_Model);
- }
- otb::FuzzyDescriptorsModelManager::Save(GetParameterString("out"), m_Model);
-
- };
-
- CostFunctionType::Pointer m_CostFunction;
- OptimizerType::Pointer m_Optimizer;
- otb::FuzzyDescriptorsModelManager::DescriptorsModelType m_Model;
-};
-
-}
-}
-
-OTB_APPLICATION_EXPORT(otb::Wrapper::DSFuzzyModelEstimation)
-
diff --git a/Modules/Applications/AppClassification/app/otbVectorDataDSValidation.cxx b/Modules/Applications/AppClassification/app/otbVectorDataDSValidation.cxx
deleted file mode 100644
index 64001c6a135e44b17e39ed920cef41a329b9d2bf..0000000000000000000000000000000000000000
--- a/Modules/Applications/AppClassification/app/otbVectorDataDSValidation.cxx
+++ /dev/null
@@ -1,171 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#include "otbVectorDataToDSValidatedVectorDataFilter.h"
-#include "otbWrapperApplication.h"
-#include "otbWrapperApplicationFactory.h"
-#include "otbWrapperStringListParameter.h"
-
-
-namespace otb
-{
-namespace Wrapper
-{
-
-class VectorDataDSValidation: public Application
-{
-
-
-public:
- /** Standard class typedefs. */
- typedef VectorDataDSValidation Self;
- typedef Application Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
-
- typedef double PrecisionType;
- typedef otb::VectorData<PrecisionType> VectorDataType;
- typedef otb::VectorDataToDSValidatedVectorDataFilter<VectorDataType, PrecisionType>
- VectorDataValidationFilterType;
- typedef VectorDataValidationFilterType::LabelSetType
- LabelSetType;
- typedef FuzzyDescriptorsModelManager::DescriptorsModelType DescriptorsModelType;
-
- typedef otb::Wrapper::StringListParameter::StringListType StringListType;
-
- /** Standard macro */
- itkNewMacro(Self);
-
- itkTypeMacro(VectorDataDSValidation, otb::Application);
-
-private:
- void DoInit() override
- {
- SetName("VectorDataDSValidation");
- SetDescription("Vector data validation based on the fusion of features using Dempster-Shafer evidence theory framework.");
-
- SetDocName("Vector Data validation");
- SetDocLongDescription("This application validates or unvalidate the studied samples using the Dempster-Shafer theory.");
- SetDocLimitations("None.");
- SetDocAuthors("OTB-Team");
- SetDocSeeAlso("http://en.wikipedia.org/wiki/Dempster-Shafer_theory");
-
- AddDocTag(Tags::FeatureExtraction);
-
-
- AddParameter(ParameterType_InputVectorData, "in", "Input Vector Data");
- SetParameterDescription("in", "Input vector data to validate");
-
- AddParameter(ParameterType_InputFilename, "descmod", "Descriptors model filename");
- SetParameterDescription("descmod", "Fuzzy descriptors model (xml file)");
-
- AddParameter(ParameterType_StringList, "belsup", "Belief Support");
- SetParameterDescription("belsup", "Dempster Shafer study hypothesis to compute belief");
-
- AddParameter(ParameterType_StringList, "plasup", "Plausibility Support");
- SetParameterDescription("plasup", "Dempster Shafer study hypothesis to compute plausibility");
-
- AddParameter(ParameterType_OutputVectorData, "out", "Output Vector Data");
- SetParameterDescription("out", "Output VectorData containing only the validated samples");
-
- AddParameter(ParameterType_String, "cri", "Criterion");
- SetParameterDescription("cri", "Dempster Shafer criterion (by default (belief+plausibility)/2)");
- MandatoryOff("cri");
- SetParameterString("cri", "((Belief + Plausibility)/2.)");
-
- AddParameter(ParameterType_Float, "thd", "Criterion threshold");
- SetParameterDescription("thd", "Criterion threshold (default 0.5)");
- MandatoryOff("thd");
- SetParameterFloat("thd",0.5);
-
- // Doc example parameter settings
- SetDocExampleParameterValue("in", "cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp");
- SetDocExampleParameterValue("belsup", "cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp");
- SetDocExampleParameterValue("descmod", "DSFuzzyModel.xml");
- SetDocExampleParameterValue("out", "VectorDataDSValidation.shp");
-
- SetOfficialDocLink();
- }
-
- void DoUpdateParameters() override
- {
- // Nothing to do here : all parameters are independent
-
-
- // .. //
-
-
- }
-
- void DoExecute() override
- {
-
- //Read the vector data
- VectorDataType::Pointer inVectorData = GetParameterVectorData("in");
- inVectorData->Update();
-
- // Load the descriptors model
- std::string descModFile = GetParameterString("descmod");
- DescriptorsModelType descMod = FuzzyDescriptorsModelManager::Read(descModFile);
-
- LabelSetType Bhyp, Phyp;
- int nbSet;
-
- StringListType stringList = GetParameterStringList("belsup");
- nbSet = stringList.size();
-
- for (int i = 0; i < nbSet; i++)
- {
- std::string str = stringList[i];
- Bhyp.insert(str);
- }
- stringList = GetParameterStringList("plasup");
- nbSet = stringList.size();
- for (int i = 0; i < nbSet; i++)
- {
- std::string str = stringList[i];
- Phyp.insert(str);
- }
-
- // Process
- m_ValidationFilter = VectorDataValidationFilterType::New();
- m_ValidationFilter->SetInput(inVectorData);
- m_ValidationFilter->SetDescriptorModels(descMod);
- m_ValidationFilter->SetBeliefHypothesis(Bhyp);
- m_ValidationFilter->SetPlausibilityHypothesis(Phyp);
-
- m_ValidationFilter->SetCriterionFormula(GetParameterString("cri"));
- m_ValidationFilter->SetCriterionThreshold(GetParameterFloat("thd"));
-
- // Set the output image
- SetParameterOutputVectorData("out", m_ValidationFilter->GetOutput());
-
- };
-
- VectorDataValidationFilterType::Pointer m_ValidationFilter;
-
-
-};
-}
-}
-
-OTB_APPLICATION_EXPORT(otb::Wrapper::VectorDataDSValidation);
diff --git a/Modules/Applications/AppClassification/test/CMakeLists.txt b/Modules/Applications/AppClassification/test/CMakeLists.txt
index 556cc57987594132598622a258bc9019e23037f7..2379deb501c3c6233fb1a1a6b34e8fe99a78c6e0 100644
--- a/Modules/Applications/AppClassification/test/CMakeLists.txt
+++ b/Modules/Applications/AppClassification/test/CMakeLists.txt
@@ -563,104 +563,6 @@ otb_test_application(NAME apTvFusionOfClassificationsMV2Inputs
${OTBAPP_BASELINE}/apTvFusionOfClassifications2InputsOutput.tif
${TEMP}/apTvFusionOfClassificationsMV2InputsOutput.tif)
-
-#----------- ComputePolylineFeatureFromImage TESTS ----------------
-otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_wr
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/NDVI.TIF}
- -vd LARGEINPUT{DEMPSTER-SHAFER/wrongroads.shp}
- -expr "(b1 > 0.4)"
- -field "NONDVI"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_wr.shp)
-
-# FIXME cascade dependencies to largeinput repository
-if(OTB_DATA_USE_LARGEINPUT)
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_RoadExtractionApplication
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/SpectralAngleRoad.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_RoadExtractionApplication.shp
- -expr "(b1 > 0.25)"
- -field "ROADSA"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_RoadExtractionApplication.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_RoadExtractionApplication PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_RoadExtractionApplication)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_wr
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/SpectralAngleRoad.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_wr.shp
- -expr "(b1 > 0.25)"
- -field "ROADSA"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_wr.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_wr PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_wr)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_wr
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/BUILDINGS.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_wr.shp
- -expr "(b1 == 0)"
- -field "NOBUIL"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp
- VALID --compare-ogr ${EPSILON_9}
- ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp
- ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_wr PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_wr)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_RoadExtractionApplication
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/NDVI.TIF}
- -vd LARGEINPUT{DEMPSTER-SHAFER/road_extraction.shp}
- -expr "(b1 > 0.4)"
- -field "NONDVI"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_RoadExtractionApplication.shp)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_gt
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/NDVI.TIF}
- -vd LARGEINPUT{DEMPSTER-SHAFER/roads_ground_truth.shp}
- -expr "(b1 > 0.4)"
- -field NONDVI
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage.shp)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_gt
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/SpectralAngleRoad.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage.shp
- -expr "(b1 > 0.25)"
- -field "ROADSA"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_gt.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_gt PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_NONDVI_gt)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_gt
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/BUILDINGS.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_gt.shp
- -expr "(b1 == 0)"
- -field "NOBUIL"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp
- VALID --compare-ogr ${EPSILON_9}
- ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp
- ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_gt PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_gt)
-
- otb_test_application(NAME apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication
- APP ComputePolylineFeatureFromImage
- OPTIONS -in LARGEINPUT{DEMPSTER-SHAFER/BUILDINGS.TIF}
- -vd ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_RoadExtractionApplication.shp
- -expr "(b1 == 0)"
- -field "NOBUIL"
- -out ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication.shp
- VALID --compare-ogr ${EPSILON_9}
- ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication.shp
- ${TEMP}/apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication.shp)
-
- set_tests_properties(apTvCdbComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication PROPERTIES DEPENDS apTvCdbComputePolylineFeatureFromImage_LI_ROADSA_RoadExtractionApplication)
-endif()
-
#----------- KMeansClassification TESTS ----------------
if(OTB_USE_SHARK)
otb_test_application(NAME apTvClKMeansImageClassification_composite
@@ -788,30 +690,6 @@ if(OTB_USE_LIBSVM)
${TEMP}/clsvmConfMatQB1_allOpt.svm)
endif()
-#----------- DSFuzzyModelEstimation TESTS ----------------
-otb_test_application(NAME apTvCdbDSFuzzyModelEstimation_LI_autoInit
- APP DSFuzzyModelEstimation
- OPTIONS -psin ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp
- -nsin ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -desclist "NONDVI" "ROADSA" "NOBUIL"
- -maxnbit 4
- -optobs true
- -out ${TEMP}/apTvCdbDSFuzzyModelEstimatorOutput_LI_autoInit.xml)
-
-otb_test_application(NAME apTvCdbDSFuzzyModelEstimation_LI
- APP DSFuzzyModelEstimation
- OPTIONS -psin ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp
- -nsin ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -initmod ${OTB_DATA_ROOT}/Input/Dempster-Shafer/DSFuzzyModel_Init.xml
- -maxnbit 4
- -optobs true
- -out ${TEMP}/apTvCdbDSFuzzyModelEstimatorOutput_LI.xml)
-
-
#----------- ClassificationMapRegularization TESTS ----------------
otb_test_application(NAME apTvClassificationMapRegularization
APP ClassificationMapRegularization
@@ -872,38 +750,6 @@ otb_test_application(NAME apTvClComputeImagesStatisticsQB123
${OTBAPP_BASELINE_FILES}/clImageStatisticsQB123.xml
${TEMP}/apTvClEstimateImageStatisticsQB123.xml)
-
-#----------- VectorDataDSValidation TESTS ----------------
-otb_test_application(NAME cdbTvVectorDataDSValidationGroundTruth_LI
- APP VectorDataDSValidation
- OPTIONS -in ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_gt.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -descmod ${OTB_DATA_ROOT}/Input/Dempster-Shafer/DSFuzzyModel.xml
- -out ${TEMP}/cdbTvVectorDataDSValidationOutpout_LI_gt.shp
- VALID --compare-ogr 0.0
- ${OTBAPP_BASELINE_FILES}/cdbTvVectorDataDSValidationOutpout_LI_gt.shp
- ${TEMP}/cdbTvVectorDataDSValidationOutpout_LI_gt.shp)
-
-otb_test_application(NAME apTvCdbVectorDataDSValidationRoadExtractionApplication_LI
- APP VectorDataDSValidation
- OPTIONS -in ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_RoadExtractionApplication.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -descmod ${OTB_DATA_ROOT}/Input/Dempster-Shafer/DSFuzzyModel.xml
- -out ${TEMP}/apTvCdbVectorDataDSValidationOutpout_LI_RoadExtractionApplication.shp)
-
-otb_test_application(NAME cdbTvVectorDataDSValidationWrongRoads_LI
- APP VectorDataDSValidation
- OPTIONS -in ${OTBAPP_BASELINE_FILES}/cdbTvComputePolylineFeatureFromImage_LI_NOBUIL_wr.shp
- -belsup "ROADSA"
- -plasup "NONDVI" "ROADSA" "NOBUIL"
- -descmod ${OTB_DATA_ROOT}/Input/Dempster-Shafer/DSFuzzyModel.xml
- -out ${TEMP}/cdbTvVectorDataDSValidationOutpout_LI_wr.shp
- VALID --compare-ogr 0.0
- ${OTBAPP_BASELINE_FILES}/cdbTvVectorDataDSValidationOutpout_LI_wr.shp
- ${TEMP}/cdbTvVectorDataDSValidationOutpout_LI_wr.shp)
-
if(OTB_USE_OPENCV)
#----------- TrainRegression TESTS ----------------
# y = 0.01*x^2 + 1.5*x - 300
diff --git a/Modules/Core/LabelMap/test/CMakeLists.txt b/Modules/Core/LabelMap/test/CMakeLists.txt
index 068325e08e42cce455f0d61cd27a8d1764ede388..be4639ecdd26f58a333f08f6164bb8c54c8b4992 100644
--- a/Modules/Core/LabelMap/test/CMakeLists.txt
+++ b/Modules/Core/LabelMap/test/CMakeLists.txt
@@ -41,8 +41,8 @@ otb_module_target_label(otbLabelMapTestDriver)
otb_add_test(NAME obTvLabelObjectMapVectorizer COMMAND otbLabelMapTestDriver
otbLabelObjectMapVectorizer
- ${INPUTDATA}/rcc8_mire1.png
- rcc8_mire1_label_vectorizer.gml)
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
+ otbLabelObjectMapVectorizerOutput.gml)
otb_add_test(NAME obTvLabelImageToLabelMapWithAdjacencyFilter COMMAND otbLabelMapTestDriver
--compare-ascii ${NOTOL}
@@ -64,13 +64,13 @@ otb_add_test(NAME obTvKMeansAttributesLabelMapFilter COMMAND otbLabelMapTestDriv
${TEMP}/obTvKMeansAttributesLabelMapFilter.txt)
otb_add_test(NAME obTvLabelMapToSampleListFilter COMMAND otbLabelMapTestDriver
otbLabelMapToSampleListFilter
- ${OTB_DATA_ROOT}/Input/rcc8_mire1.png
+ ${OTB_DATA_ROOT}/Input/labelImage_UnsignedChar.tif
SHAPE::Flusser01 SHAPE::Flusser02 SHAPE::Flusser03 SHAPE::Flusser04
SHAPE::Flusser05 SHAPE::Flusser06 SHAPE::Flusser07 SHAPE::Flusser08
SHAPE::Flusser09 SHAPE::Flusser10 SHAPE::Flusser11)
otb_add_test(NAME obTvLabelMapWithClassLabelToLabeledSampleListFilter COMMAND otbLabelMapTestDriver
otbLabelMapWithClassLabelToLabeledSampleListFilter
- ${OTB_DATA_ROOT}/Input/rcc8_mire1.png
+ ${OTB_DATA_ROOT}/Input/labelImage_UnsignedChar.tif
SHAPE::Flusser01 SHAPE::Flusser02 SHAPE::Flusser03 SHAPE::Flusser04
SHAPE::Flusser05 SHAPE::Flusser06 SHAPE::Flusser07 SHAPE::Flusser08
SHAPE::Flusser09 SHAPE::Flusser10 SHAPE::Flusser11)
diff --git a/Modules/Core/LabelMap/test/otbLabelMapWithClassLabelToLabeledSampleListFilter.cxx b/Modules/Core/LabelMap/test/otbLabelMapWithClassLabelToLabeledSampleListFilter.cxx
index 695a24f06d7db8c3dc9d71871ab38b78d4d9f525..31d6b9a066c0e57d9f111e7173699d4d0bd146b6 100644
--- a/Modules/Core/LabelMap/test/otbLabelMapWithClassLabelToLabeledSampleListFilter.cxx
+++ b/Modules/Core/LabelMap/test/otbLabelMapWithClassLabelToLabeledSampleListFilter.cxx
@@ -62,7 +62,7 @@ int otbLabelMapWithClassLabelToLabeledSampleListFilter(int argc, char* argv[])
LabelMapFilterType::Pointer labelMapFilter = LabelMapFilterType::New();
labelMapFilter->SetInput(lreader->GetOutput());
- labelMapFilter->SetInputForegroundValue(255);
+ labelMapFilter->SetInputForegroundValue(1);
ShapeLabelMapFilterType::Pointer shapeLabelMapFilter = ShapeLabelMapFilterType::New();
shapeLabelMapFilter->SetInput(labelMapFilter->GetOutput());
diff --git a/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.h b/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.h
deleted file mode 100644
index 4406a107fb9c43269b30bffa577d9e5a73de37c4..0000000000000000000000000000000000000000
--- a/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.h
+++ /dev/null
@@ -1,212 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDataNodeImageFunction_h
-#define otbDataNodeImageFunction_h
-
-#include "otbDataNodeFunctionBase.h"
-#include "otbDataNode.h"
-#include "itkContinuousIndex.h"
-#include "itkImageBase.h"
-
-namespace otb
-{
-/** \class DataNodeImageFunction
- * \brief TODO
- *
- *
- *
- * \ingroup Functions
- * \sa NDVIDataNodeFeatureFunction
- *
- * \ingroup OTBVectorDataBase
- */
-
-template <
-class TImage,
-class TOutput,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT DataNodeImageFunction :
- public DataNodeFunctionBase<DataNode<TCoordRep,
- TImage::ImageDimension,
- TPrecision>,
- TOutput>
-{
-public:
- /** Dimension underlying input image. */
- itkStaticConstMacro(ImageDimension, unsigned int,
- TImage::ImageDimension);
-
- /** Standard class typedefs. */
- typedef DataNodeImageFunction Self;
- typedef DataNodeFunctionBase<DataNode<TCoordRep,
- itkGetStaticConstMacro(ImageDimension),
- TPrecision>,
- TOutput> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(DataNodeImageFunction, DataNodeFunctionBase);
-
- /** Some typedefs. */
- typedef TImage InputImageType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
-
- typedef TOutput OutputType;
-
- /** CoordRepType typedef support. */
- typedef TCoordRep CoordRepType;
-
- /** PrecisionType typedef support. */
- typedef TPrecision PrecisionType;
-
- /** Index Type. */
- typedef typename InputImageType::IndexType IndexType;
- typedef typename InputImageType::IndexValueType IndexValueType;
-
- /** ContinuousIndex Type. */
- typedef itk::ContinuousIndex<CoordRepType, itkGetStaticConstMacro(ImageDimension)>
- ContinuousIndexType;
-
- /** DataNode Type */
- typedef typename Superclass::DataNodeType DataNodeType;
-
- /** Point Type */
- typedef typename DataNodeType::PointType PointType;
-
- /** Set the input image.
- * \warning this method caches BufferedRegion information.
- * If the BufferedRegion has changed, user must call
- * SetInputImage again to update cached values. */
- virtual void SetInputImage( const InputImageType * ptr );
-
- /** Get the input image. */
- const InputImageType * GetInputImage() const
- { return m_Image.GetPointer(); }
-
- /** Evaluate the function at specified DataNode position.
- * Subclasses must provide this method. */
- TOutput Evaluate( const DataNodeType& node ) const override = 0;
-
- /** Check if an index is inside the image buffer.
- * we take into account the fact that each voxel has its
- * center at the integer coordinate and extends half way
- * to the next integer coordinate.
- * \warning For efficiency, no validity checking of
- * the input image is done. */
- virtual bool IsInsideBuffer( const IndexType & index ) const
- {
- for( unsigned int j = 0; j < ImageDimension; ++j )
- {
- if( index[j] < m_StartIndex[j] )
- {
- return false;
- }
- if( index[j] > m_EndIndex[j] )
- {
- return false;
- }
- }
- return true;
- }
-
- /** Check if a continuous index is inside the image buffer.
- * \warning For efficiency, no validity checking of
- * the input image is done. */
- virtual bool IsInsideBuffer( const ContinuousIndexType & index ) const
- {
- for( unsigned int j = 0; j < ImageDimension; ++j )
- {
- if( index[j] < m_StartContinuousIndex[j] )
- {
- return false;
- }
- if( index[j] >= m_EndContinuousIndex[j] )
- //Comment this instruction after itkv4 migration (correct
- //usage of centered-pixel coordinates)
- //if( index[j] > m_EndContinuousIndex[j] )
- {
- return false;
- }
- }
- return true;
- }
-
- /** Check if a point is inside the image buffer.
- * \warning For efficiency, no validity checking of
- * the input image pointer is done. */
- virtual bool IsInsideBuffer( const PointType & point ) const
- {
- ContinuousIndexType index;
- m_Image->TransformPhysicalPointToContinuousIndex( point, index );
- return this->IsInsideBuffer( index );
- }
-
- /** Convert point to continuous index */
- void ConvertPointToContinuousIndex( const PointType & point,
- ContinuousIndexType & cindex ) const
- {
- m_Image->TransformPhysicalPointToContinuousIndex( point, cindex );
- }
-
- /** Convert continuous index to nearest index. */
- inline void ConvertContinuousIndexToNearestIndex( const ContinuousIndexType & cindex,
- IndexType & index ) const
- {
- index.CopyWithRound( cindex );
- }
-
- /** Set/Get methods */
- itkGetConstReferenceMacro(StartIndex, IndexType);
- itkGetConstReferenceMacro(EndIndex, IndexType);
-
- itkGetConstReferenceMacro(StartContinuousIndex, ContinuousIndexType);
- itkGetConstReferenceMacro(EndContinuousIndex, ContinuousIndexType);
-
-protected:
- DataNodeImageFunction();
- ~DataNodeImageFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- /** Const pointer to the input image. */
- InputImageConstPointer m_Image;
-
- /** Cache some values for testing if indices are inside buffered region. */
- IndexType m_StartIndex;
- IndexType m_EndIndex;
- ContinuousIndexType m_StartContinuousIndex;
- ContinuousIndexType m_EndContinuousIndex;
-
-private:
- DataNodeImageFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbDataNodeImageFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.hxx b/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.hxx
deleted file mode 100644
index b06e770312b5cf63b3bc4b59708aa40c5334e706..0000000000000000000000000000000000000000
--- a/Modules/Core/VectorDataBase/include/otbDataNodeImageFunction.hxx
+++ /dev/null
@@ -1,98 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDataNodeImageFunction_hxx
-#define otbDataNodeImageFunction_hxx
-
-#include "otbDataNodeImageFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TImage, class TOutput, class TCoordRep, class TPrecision>
-DataNodeImageFunction<TImage, TOutput, TCoordRep, TPrecision>
-::DataNodeImageFunction()
-{
- m_Image = nullptr;
- m_StartIndex.Fill(0);
- m_EndIndex.Fill(0);
- m_StartContinuousIndex.Fill(0.0f);
- m_EndContinuousIndex.Fill(0.0f);
-}
-
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TImage, class TOutput, class TCoordRep, class TPrecision>
-void
-DataNodeImageFunction<TImage, TOutput, TCoordRep, TPrecision>
-::PrintSelf(
- std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf( os, indent );
- os << indent << "InputImage: " << m_Image.GetPointer() << std::endl;
- os << indent << "StartIndex: " << m_StartIndex << std::endl;
- os << indent << "EndIndex: " << m_EndIndex << std::endl;
- os << indent << "StartContinuousIndex: " << m_StartContinuousIndex << std::endl;
- os << indent << "EndContinuousIndex: " << m_EndContinuousIndex << std::endl;
-}
-
-
-/**
- * Initialize by setting the input image
- */
-template <class TImage, class TOutput, class TCoordRep, class TPrecision>
-void
-DataNodeImageFunction<TImage, TOutput, TCoordRep, TPrecision>
-::SetInputImage(
- const InputImageType * ptr )
-{
- // set the input image
- m_Image = ptr;
-
- if ( ptr )
- {
- typename InputImageType::SizeType size = ptr->GetBufferedRegion().GetSize();
- m_StartIndex = ptr->GetBufferedRegion().GetIndex();
-
- for ( unsigned int j = 0; j < ImageDimension; ++j )
- {
- m_EndIndex[j] = m_StartIndex[j] + static_cast<IndexValueType>( size[j] ) - 1;
- m_StartContinuousIndex[j] = static_cast<CoordRepType>( m_StartIndex[j] - 0.5 );
- m_EndContinuousIndex[j] = static_cast<CoordRepType>( m_EndIndex[j] + 0.5 );
-
- //Comment these instructions after migration to ITKv4 where there is a correct
- //usage of centered-pixel coordinates
- //(ITK_USE_CENTERED_PIXEL_COORDINATES_CONSISTENTLY always ON)
- //m_StartContinuousIndex[j] = static_cast<CoordRepType>( m_StartIndex[j] );
- //m_EndContinuousIndex[j] = static_cast<CoordRepType>( m_EndIndex[j] );
- }
- }
-}
-
-
-} // end namespace itk
-
-#endif
diff --git a/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.h b/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.h
deleted file mode 100644
index c99f15d0b23334b25ec307b7fcb53e93d764ba26..0000000000000000000000000000000000000000
--- a/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.h
+++ /dev/null
@@ -1,112 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDataNodeVectorDataFunction_h
-#define otbDataNodeVectorDataFunction_h
-
-#include "otbDataNodeFunctionBase.h"
-#include "otbVectorDataProperties.h"
-
-
-namespace otb
-{
-/** \class DataNodeVectorDataFunction
- * \brief TODO
- *
- *
- *
- * \ingroup Functions
- * \sa
- *
- * \ingroup OTBVectorDataBase
- */
-
-template <
-class TOutput,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT DataNodeVectorDataFunction :
- public DataNodeFunctionBase<DataNode<TCoordRep,
- 2,
- TPrecision>,
- TOutput>
-{
-public:
- /** Standard class typedefs. */
- typedef DataNodeVectorDataFunction Self;
- typedef DataNodeFunctionBase<DataNode<TCoordRep,
- 2,
- TPrecision>,
- TOutput> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(DataNodeVetorDataFunction, DataNodeFunctionBase);
-
- /** Some typedefs. */
- typedef VectorData<TCoordRep, 2, TPrecision> VectorDataType;
- typedef typename VectorDataType::ConstPointer VectorDataConstPointerType;
- typedef TOutput OutputType;
-
- /** CoordRepType typedef support. */
- typedef TCoordRep CoordRepType;
-
- /** PrecisionType typedef support. */
- typedef TPrecision PrecisionType;
-
- /** DataNode Type */
- typedef typename Superclass::DataNodeType DataNodeType;
-
- /** Point Type */
- typedef typename DataNodeType::PointType PointType;
-
- /** Set the input VetorData. */
- virtual void SetInputVectorData( const VectorDataType * ptr );
-
- /** Get the input VectorData. */
- const VectorDataType * GetInputVectorData() const
- { return m_VectorData.GetPointer(); }
-
- /** Evaluate the function at specified DataNode position.
- * Subclasses must provide this method. */
- TOutput Evaluate( const DataNodeType& node ) const override = 0;
-
-protected:
- DataNodeVectorDataFunction();
- ~DataNodeVectorDataFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- /** Const pointer to the input VectorData. */
- VectorDataConstPointerType m_VectorData;
-
-private:
- DataNodeVectorDataFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbDataNodeVectorDataFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.hxx b/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.hxx
deleted file mode 100644
index 9ca52e1798d94b391825ca5629ba3e37a35dc1d9..0000000000000000000000000000000000000000
--- a/Modules/Core/VectorDataBase/include/otbDataNodeVectorDataFunction.hxx
+++ /dev/null
@@ -1,70 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDataNodeVectorDataFunction_hxx
-#define otbDataNodeVectorDataFunction_hxx
-
-#include "otbDataNodeVectorDataFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TOutput, class TCoordRep, class TPrecision>
-DataNodeVectorDataFunction<TOutput, TCoordRep, TPrecision>
-::DataNodeVectorDataFunction()
-{
- m_VectorData = nullptr;
-}
-
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TOutput, class TCoordRep, class TPrecision>
-void
-DataNodeVectorDataFunction<TOutput, TCoordRep, TPrecision>
-::PrintSelf(
- std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf( os, indent );
- os << indent << "VetorData: " << m_VectorData.GetPointer() << std::endl;
-}
-
-
-/**
- * Initialize by setting the input VectorData
- */
-template <class TOutput, class TCoordRep, class TPrecision>
-void
-DataNodeVectorDataFunction<TOutput, TCoordRep, TPrecision>
-::SetInputVectorData(
- const VectorDataType * ptr )
-{
- // set the input VectorData
- m_VectorData = ptr;
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Core/VectorDataBase/include/otbGISConnectionImplementation.h b/Modules/Core/VectorDataBase/include/otbGISConnectionImplementation.h
deleted file mode 100644
index ba09b76b6d314c30615c420b164e74c0588488b5..0000000000000000000000000000000000000000
--- a/Modules/Core/VectorDataBase/include/otbGISConnectionImplementation.h
+++ /dev/null
@@ -1,98 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbGISConnectionImplementation_h
-#define otbGISConnectionImplementation_h
-
-#include "itkDataObject.h"
-#include "itkObjectFactory.h"
-#include <string>
-
-namespace otb
-{
-/** \class GISConnectionImplementation
- * \brief Base class for GIS DB connection implementations
- *
- *
- *
- * \ingroup OTBVectorDataBase
- */
-
-template <class TransactorType>
-class ITK_EXPORT GISConnectionImplementation
- : public itk::DataObject
-{
-public:
- /** Standard class typedefs */
- typedef GISConnectionImplementation Self;
- typedef itk::DataObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Standard macros */
- itkNewMacro(Self);
- itkTypeMacro(GISConnectionImplementation, itk::DataObject);
-
- /** Acessors */
- itkGetMacro(Host, std::string);
- itkSetMacro(Host, std::string);
-
- itkGetMacro(DBName, std::string);
- itkSetMacro(DBName, std::string);
-
- itkGetMacro(User, std::string);
- itkSetMacro(User, std::string);
-
- itkGetMacro(Password, std::string);
- itkSetMacro(Password, std::string);
-
- itkGetMacro(Port, std::string);
- itkSetMacro(Port, std::string);
-
- itkGetMacro(Options, std::string);
- itkSetMacro(Options, std::string);
-
- /** Using the connection */
-
- virtual void ConnectToDB(){}
-
- virtual void PerformTransaction(const TransactorType& itkNotUsed(theTransaction)) const {}
-
-protected:
- /** Constructor */
- GISConnectionImplementation(){};
- /** Destructor */
- virtual ~GISConnectionImplementation(){};
-
-private:
- GISConnectionImplementation(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- std::string m_Host;
- std::string m_DBName;
- std::string m_User;
- std::string m_Password;
- std::string m_Port;
- std::string m_Options;
-
-};
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/CMakeLists.txt b/Modules/Detection/ObjectDetection/CMakeLists.txt
deleted file mode 100644
index e43a781cad9f8f9c4566a125e2023eb9444e3b6f..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBObjectDetection)
-otb_module_impl()
diff --git a/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.h b/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.h
deleted file mode 100644
index 6432b507d125bbc7c51e331341c884a5da73a6b3..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.h
+++ /dev/null
@@ -1,378 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDescriptorsListSampleGenerator_h
-#define otbDescriptorsListSampleGenerator_h
-
-#include <vector>
-
-#include "itkVariableLengthVector.h"
-#include "itkImageRegion.h"
-#include "itkFunctionBase.h"
-#include "itkListSample.h"
-#include "itkSimpleDataObjectDecorator.h"
-
-#include "otbListSampleSource.h"
-#include "otbVectorData.h"
-#include "otbPersistentImageFilter.h"
-#include "otbPersistentFilterStreamingDecorator.h"
-
-namespace otb
-{
-
-template <class TOutputPrecision>
-class DefaultDescriptorsType
-{
-public:
- typedef itk::VariableLengthVector<TOutputPrecision> Type;
-};
-
-/** \class PersistentDescriptorsListSampleGenerator
- * \brief [internal] Helper class for the implementation of DescriptorsListSampleGenerator
- *
- * This class inherits PersistentImageFilter and provides the Reset/Synthesize functions,
- * plus the ThreadedGenerateData function implementing the image function evaluation
- *
- * \ingroup OTBObjectDetection
- */
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabel>
-class ITK_EXPORT PersistentDescriptorsListSampleGenerator :
- public PersistentImageFilter<TInputImage, TInputImage>
-{
-public:
- /** Standard Self typedef */
- typedef PersistentDescriptorsListSampleGenerator Self;
- typedef PersistentImageFilter<TInputImage, TInputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Runtime information support. */
- itkTypeMacro(PersistentDescriptorsListSampleGenerator, PersistentImageFilter);
-
- /** Image related typedefs. */
- typedef TInputImage InputImageType;
- typedef typename TInputImage::Pointer InputImagePointer;
- typedef typename TInputImage::RegionType RegionType;
- typedef typename TInputImage::SizeType SizeType;
- typedef typename TInputImage::IndexType IndexType;
- typedef typename TInputImage::PixelType PixelType;
-
- itkStaticConstMacro(InputImageDimension, unsigned int,
- TInputImage::ImageDimension);
-
- /** Image related typedefs. */
- itkStaticConstMacro(ImageDimension, unsigned int,
- TInputImage::ImageDimension);
-
- /** Smart Pointer type to a DataObject. */
- typedef itk::ProcessObject::DataObjectPointerArraySizeType DataObjectPointerArraySizeType;
- typedef typename itk::DataObject::Pointer DataObjectPointer;
-
- /** Input VectorData */
- typedef TVectorData VectorDataType;
- typedef typename VectorDataType::Pointer VectorDataPointerType;
- typedef typename VectorDataType::DataNodeType VectorDataNodeType;
- typedef typename VectorDataType::DataNodePointerType VectorDataNodePointerType;
- typedef typename VectorDataType::DataTreeType VectorDataTreeType;
- typedef typename VectorDataType::DataTreePointerType VectorDataTreePointerType;
- typedef typename VectorDataNodeType::PointType VectorDataPointType;
- typedef typename VectorDataNodeType::LineType VectorDataLineType;
- typedef typename VectorDataNodeType::PolygonType VectorDataPolygonType;
- typedef itk::PreOrderTreeIterator<VectorDataTreeType> VectorDataTreeIteratorType;
-
- /** Function type for descriptors extraction */
- typedef TFunctionType DescriptorsFunctionType;
- typedef typename DescriptorsFunctionType::Pointer DescriptorsFunctionPointerType;
- typedef typename DescriptorsFunctionType::InputType DescriptorsFunctionPointType;
-
- typedef itk::ContinuousIndex
- <typename DescriptorsFunctionPointType::ValueType,
- itkGetStaticConstMacro(InputImageDimension)> ContinuousIndexType;
-
- /** ListSample output */
- typedef TListSample ListSampleType;
- typedef typename ListSampleType::Pointer ListSamplePointerType;
- typedef typename ListSampleType::MeasurementVectorType SampleMeasurementVectorType;
- typedef typename ListSampleType::MeasurementType SampleMeasurementType;
-
- /** LabelListSample output */
- typedef TLabel LabelType;
- typedef itk::FixedArray<LabelType,1> LabelSampleType;
- typedef itk::Statistics::ListSample<LabelSampleType> LabelListSampleType;
- typedef typename LabelListSampleType::Pointer LabelListSamplePointerType;
- typedef typename LabelListSampleType::MeasurementVectorType LabelMeasurementVectorType;
- typedef typename LabelListSampleType::MeasurementType LabelMeasurementType;
-
- /** ListSamplePositions output */
- typedef std::vector<DescriptorsFunctionPointType> SamplesPositionType;
- typedef itk::SimpleDataObjectDecorator<SamplesPositionType> SamplesPositionObjectType;
- typedef typename SamplesPositionObjectType::Pointer SamplesPositionObjectPointerType;
-
- void SetSamplesLocations(VectorDataType * input);
- VectorDataType * GetSamplesLocations(void);
-
- /** The function to evaluate */
- itkSetObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
- itkGetObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
- itkGetConstObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
-
- /** Output sample list */
- ListSampleType* GetListSample();
-
- /** Output label list */
- LabelListSampleType* GetLabelListSample();
-
- /** Output sample position list */
- SamplesPositionType& GetSamplesPositions();
- SamplesPositionObjectType* GetSamplesPositionsObject();
-
- itkSetMacro( NeighborhoodRadius, unsigned int );
- itkGetConstReferenceMacro( NeighborhoodRadius, unsigned int );
-
- /** Make a DataObject of the correct type to be used as the specified
- * output. */
- itk::DataObject::Pointer MakeOutput(DataObjectPointerArraySizeType idx) override;
- using Superclass::MakeOutput;
-
- void AllocateOutputs() override;
- void GenerateOutputInformation() override;
- void Reset(void) override;
- void Synthetize(void) override;
-
- void AddInput(itk::DataObject * dataObject) override
- {
- Superclass::AddInput(dataObject);
- }
-
-protected:
- PersistentDescriptorsListSampleGenerator();
- ~PersistentDescriptorsListSampleGenerator() override;
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- void GenerateInputRequestedRegion() override;
-
- void BeforeThreadedGenerateData() override;
-
- /** Multi-thread version GenerateData. */
- void ThreadedGenerateData(const RegionType& outputRegionForThread,
- itk::ThreadIdType threadId) override;
-
-private:
- PersistentDescriptorsListSampleGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- bool IsInsideWithNeighborhoodRadius(const RegionType& region, const ContinuousIndexType &index) const
- {
- typedef typename IndexType::IndexValueType IndexValueType;
- typedef typename ContinuousIndexType::ValueType ContinuousIndexValueType;
-
- for(unsigned int i=0; i<ImageDimension; ++i)
- {
- if( itk::Math::RoundHalfIntegerUp<IndexValueType>(index[i]) < static_cast<IndexValueType>( region.GetIndex(i) ) + static_cast<IndexValueType>(m_NeighborhoodRadius) )
- //Comment this instruction after itkv4 migration (correct
- //usage of centered-pixel coordinates)
- //if( index[i] < static_cast<IndexValueType>( region.GetIndex(i) ) + m_NeighborhoodRadius )
- {
- return false;
- }
- // bound is the last valid pixel location
- const ContinuousIndexValueType bound = static_cast<ContinuousIndexValueType>(
- region.GetIndex(i) + region.GetSize(i) - 0.5);
- //Comment this instruction after itkv4 migration (correct
- //usage of centered-pixel coordinates)
- //const ContinuousIndexValueType bound = static_cast<ContinuousIndexValueType>(
- // region.GetIndex(i) + static_cast<IndexValueType>(region.GetSize(i)) - 1);
-
- if( index[i] > bound - m_NeighborhoodRadius )
- {
- return false;
- }
- }
- return true;
- }
- typedef std::vector<ListSamplePointerType> ListSampleArray;
- typedef std::vector<LabelListSamplePointerType> LabelListSampleArray;
- typedef std::vector<SamplesPositionType> SamplesPositionArray;
-
- ListSampleArray m_ThreadListSample;
- LabelListSampleArray m_ThreadLabelListSample;
- SamplesPositionArray m_ThreadSamplesPosition;
-
- DescriptorsFunctionPointerType m_DescriptorsFunction;
-
- unsigned int m_NeighborhoodRadius;
-};
-
-
-/** \class DescriptorsListSampleGenerator
- * \brief This class generates a ListSample by computing local descriptors
- * on an image at specified positions.
- *
- * Given an image (by SetInputImage()) and a vector data containing points (by SetSamplesLocations()),
- * this class evaluates an ImageFunction (set by SetDescriptorsFunction()) at each point of the vector data
- * over the image.
- * It generates a ListSample containing the descriptors values for each sample,
- * along with a label ListSample containing the label associated with each sample.
- * The label is read from the vector data using the data field "Class", read as an int
- *
- * This class is streaming capable and multithreaded
- *
- * \ingroup OTBObjectDetection
- */
-template <class TInputImage, class TVectorData, class TListSample, class TLabel, class TOutputPrecision = double, class TCoordRep = double>
-class ITK_EXPORT DescriptorsListSampleGenerator :
- public PersistentFilterStreamingDecorator<
- PersistentDescriptorsListSampleGenerator< TInputImage,
- TVectorData,
- itk::FunctionBase< itk::Point<TCoordRep, 2>,
- typename DefaultDescriptorsType<TOutputPrecision>::Type >,
- TListSample,
- TLabel > >
-{
-public:
- /** Standard Self typedef */
- typedef DescriptorsListSampleGenerator Self;
- typedef PersistentFilterStreamingDecorator
- < PersistentDescriptorsListSampleGenerator
- <TInputImage,
- TVectorData,
- itk::FunctionBase< itk::Point<TCoordRep, 2>, typename DefaultDescriptorsType<TOutputPrecision>::Type >,
- TListSample,
- TLabel> > Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(DescriptorsListSampleGenerator, PersistentFilterStreamingDecorator);
-
- typedef TInputImage InputImageType;
- typedef TVectorData InputVectorDataType;
- typedef TListSample ListSampleType;
- typedef TCoordRep CoordRepType;
- typedef TOutputPrecision OutputPrecision;
-
- /** The coordinates used when evaluating function */
- typedef itk::Point<TCoordRep, 2> PointType;
-
- /** The return value of the function */
- typedef typename DefaultDescriptorsType<TOutputPrecision>::Type DescriptorType;
-
- /** The function evaluated on the input image at locations specified by the vector data */
- typedef itk::FunctionBase<PointType, DescriptorType> DescriptorsFunctionType;
- typedef typename DescriptorsFunctionType::Pointer DescriptorsFunctionPointerType;
-
- typedef typename Superclass::FilterType PersistentFilterType;
- typedef typename PersistentFilterType::LabelListSampleType LabelListSampleType;
- typedef typename PersistentFilterType::SamplesPositionObjectType SamplesPositionObjectType;
- typedef typename PersistentFilterType::SamplesPositionType SamplesPositionType;
-
-
- /** Input image to extract feature */
- void SetInputImage(InputImageType * input)
- {
- this->GetFilter()->SetInput(input);
- }
-
- /** Input image to extract feature */
- InputImageType * GetInputImage()
- {
- return this->GetFilter()->GetInput();
- }
-
- void AddInput(itk::DataObject * dataObject) override
- {
- this->GetFilter()->AddInput(dataObject);
- }
-
- /** Sample locations as a VectorData of points. The label is in the ClassKey feature */
- void SetSamplesLocations(InputVectorDataType * input)
- {
- this->GetFilter()->SetSamplesLocations(input);
- }
-
- /** Sample locations as a VectorData of points. The label is in the ClassKey feature */
- InputImageType * GetSamplesLocations()
- {
- return this->GetFilter()->GetSamplesLocations();
- }
-
- /** The function to evaluate */
- void SetDescriptorsFunction(DescriptorsFunctionType * input)
- {
- this->GetFilter()->SetDescriptorsFunction(input);
- }
-
- /** The function to evaluate */
- DescriptorsFunctionType * GetDescriptorsFunction()
- {
- return this->GetFilter()->GetDescriptorsFunction();
- }
-
- /** Final sample list */
- ListSampleType* GetListSample()
- {
- return this->GetFilter()->GetListSample();
- }
-
- /** Final label list */
- LabelListSampleType* GetLabelListSample()
- {
- return this->GetFilter()->GetLabelListSample();
- }
-
- /** Final label list */
- SamplesPositionType& GetSamplesPositions()
- {
- return this->GetFilter()->GetSamplesPositions();
- }
-
- SamplesPositionObjectType* GetSamplesPositionsObject()
- {
- return this->GetFilter()->GetSamplesPositionsObject();
- }
-
- otbSetObjectMemberMacro(Filter, NeighborhoodRadius, unsigned int);
- otbGetObjectMemberMacro(Filter, NeighborhoodRadius, unsigned int);
-
- protected:
- /** Constructor */
- DescriptorsListSampleGenerator();
-
- /** Destructor */
- ~DescriptorsListSampleGenerator() override;
-
- private:
- DescriptorsListSampleGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbDescriptorsListSampleGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.hxx b/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.hxx
deleted file mode 100644
index 7fb7b6f55ec2d70ed30d592b63fba40da9513e0a..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbDescriptorsListSampleGenerator.hxx
+++ /dev/null
@@ -1,361 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDescriptorsListSampleGenerator_hxx
-#define otbDescriptorsListSampleGenerator_hxx
-
-#include "otbDescriptorsListSampleGenerator.h"
-
-#include "itkContinuousIndex.h"
-
-namespace otb
-{
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::PersistentDescriptorsListSampleGenerator()
- : m_NeighborhoodRadius(0)
-{
- // Need 2 inputs : a vector image and a vectordata
- this->SetNumberOfRequiredInputs(2);
-
- // Have 4 outputs : the image created by Superclass,
- // the sample list, the label sample list, the positions of the samples
- this->SetNumberOfRequiredOutputs(3);
- this->itk::ProcessObject::SetNthOutput(1, this->MakeOutput(1).GetPointer());
- this->itk::ProcessObject::SetNthOutput(2, this->MakeOutput(2).GetPointer());
- this->itk::ProcessObject::SetNthOutput(3, this->MakeOutput(3).GetPointer());
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::~PersistentDescriptorsListSampleGenerator()
-{
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::AllocateOutputs()
-{
- // This is commented to prevent the streaming of the whole image for the first stream strip
- // It shall not cause any problem because the output image of this filter is not intended to be used.
- //InputImagePointer image = const_cast< TInputImage * >( this->GetInput() );
- //this->GraftOutput( image );
- // Nothing that needs to be allocated for the remaining outputs
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GenerateOutputInformation()
-{
- Superclass::GenerateOutputInformation();
- if (this->GetInput())
- {
- this->GetOutput()->CopyInformation(this->GetInput());
- this->GetOutput()->SetLargestPossibleRegion(this->GetInput()->GetLargestPossibleRegion());
-
- if (this->GetOutput()->GetRequestedRegion().GetNumberOfPixels() == 0)
- {
- this->GetOutput()->SetRequestedRegion(this->GetOutput()->GetLargestPossibleRegion());
- }
- }
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::SetSamplesLocations(VectorDataType* location)
-{
- this->SetNthInput(1, location);
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-typename PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>::VectorDataType*
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GetSamplesLocations()
-{
-
- return static_cast<VectorDataType*>(this->itk::ProcessObject::GetInput(1));
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-typename PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>::ListSampleType*
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GetListSample()
-{
- return dynamic_cast<ListSampleType*>(this->itk::ProcessObject::GetOutput(1));
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-typename PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>::LabelListSampleType*
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GetLabelListSample()
-{
- return dynamic_cast<LabelListSampleType*>( this->itk::ProcessObject::GetOutput(2) );
-}
-
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-typename PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>::SamplesPositionType&
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GetSamplesPositions()
-{
- return this->GetSamplesPositionsObject()->Get();
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-typename PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>::SamplesPositionObjectType*
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GetSamplesPositionsObject()
-{
- return dynamic_cast<SamplesPositionObjectType*>(this->itk::ProcessObject::GetOutput(3));
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-itk::DataObject::Pointer
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::MakeOutput(DataObjectPointerArraySizeType idx)
-{
- itk::DataObject::Pointer output;
- switch (idx)
- {
- case 0:
- output = static_cast<itk::DataObject*>(InputImageType::New().GetPointer());
- break;
- case 1:
- {
- ListSamplePointerType listSample = ListSampleType::New();
- output = static_cast<itk::DataObject*>(listSample.GetPointer());
- break;
- }
- case 2:
- {
- LabelListSamplePointerType labelListSample = LabelListSampleType::New();
- output = static_cast<itk::DataObject*>(labelListSample.GetPointer());
- break;
- }
- case 3:
- {
- SamplesPositionObjectPointerType samplesPositions = SamplesPositionObjectType::New();
- output = static_cast<itk::DataObject*>(samplesPositions.GetPointer());
- break;
- }
- default:
- output = static_cast<itk::DataObject*>(InputImageType::New().GetPointer());
- break;
- }
- return output;
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::Reset()
-{
- m_ThreadListSample = ListSampleArray(this->GetNumberOfThreads());
- for (unsigned int i = 0; i < this->GetNumberOfThreads(); ++i)
- {
- m_ThreadListSample[i] = ListSampleType::New();
- }
-
- m_ThreadLabelListSample = LabelListSampleArray(this->GetNumberOfThreads());
- for (unsigned int i = 0; i < this->GetNumberOfThreads(); ++i)
- {
- m_ThreadLabelListSample[i] = LabelListSampleType::New();
- }
-
- m_ThreadSamplesPosition = SamplesPositionArray(this->GetNumberOfThreads());
-
- this->GetListSample()->Clear();
- this->GetLabelListSample()->Clear();
- this->GetSamplesPositions().clear();
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::Synthetize()
-{
- // Merge the ListSample from all the threads
- ListSampleType* listSample = this->GetListSample();
- LabelListSampleType* labelListSample = this->GetLabelListSample();
- SamplesPositionType& samplesPosition = this->GetSamplesPositions();
- VectorDataPointType ref;
-
- // Get the output list measurement vector sample sizes once
- listSample->SetMeasurementVectorSize(m_ThreadListSample[0]->GetMeasurementVectorSize());
- labelListSample->SetMeasurementVectorSize(m_ThreadLabelListSample[0]->GetMeasurementVectorSize());
-
- // Copy the first thread elements into lists
- ListSampleType* threadListSample = m_ThreadListSample[0];
- LabelListSampleType* threadLabelListSample = m_ThreadLabelListSample[0];
- SamplesPositionType& threadSamplesPosition = m_ThreadSamplesPosition[0];
- for (unsigned int i = 0; i < threadListSample->Size(); ++i)
- {
- listSample->PushBack( threadListSample->GetMeasurementVector(i) );
- labelListSample->PushBack( threadLabelListSample->GetMeasurementVector(i) );
- samplesPosition.push_back( threadSamplesPosition[i] );
- }
-
- // Add the other thread element checking if the point dosn't already exist
- for (itk::ThreadIdType threadId = 1; threadId < this->GetNumberOfThreads(); ++threadId )
- {
- threadListSample = m_ThreadListSample[threadId];
- threadLabelListSample = m_ThreadLabelListSample[threadId];
- threadSamplesPosition = m_ThreadSamplesPosition[threadId];
-
- for (unsigned int i = 0; i < threadListSample->Size(); ++i)
- {
- const DescriptorsFunctionPointType & curSamplesPosition = threadSamplesPosition[i];
- if( std::find(samplesPosition.begin(), samplesPosition.end(), curSamplesPosition) == samplesPosition.end() )
- {
- listSample->PushBack( threadListSample->GetMeasurementVector(i) );
- labelListSample->PushBack( threadLabelListSample->GetMeasurementVector(i) );
- samplesPosition.push_back( curSamplesPosition );
- }
- }
- }
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::GenerateInputRequestedRegion()
-{
- Superclass::GenerateInputRequestedRegion();
-
- // get pointers to the input and output
- typename Superclass::InputImagePointer inputPtr =
- const_cast< TInputImage * >( this->GetInput() );
- typename Superclass::OutputImagePointer outputPtr = this->GetOutput();
-
- if ( !inputPtr || !outputPtr )
- {
- return;
- }
-
- // get a copy of the input requested region (should equal the output
- // requested region)
- typename TInputImage::RegionType inputRequestedRegion;
- inputRequestedRegion = inputPtr->GetRequestedRegion();
-
- // pad the input requested region by the operator radius
- inputRequestedRegion.PadByRadius( m_NeighborhoodRadius + 5 );
-
- // crop the input requested region at the input's largest possible region
- if ( inputRequestedRegion.Crop(inputPtr->GetLargestPossibleRegion()) )
- {
- inputPtr->SetRequestedRegion( inputRequestedRegion );
- return;
- }
- else
- {
- // Couldn't crop the region (requested region is outside the largest
- // possible region). Throw an exception.
-
- // store what we tried to request (prior to trying to crop)
- inputPtr->SetRequestedRegion( inputRequestedRegion );
- }
-}
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::BeforeThreadedGenerateData()
-{}
-
-
-template <class TInputImage, class TVectorData, class TFunctionType, class TListSample, class TLabelListSample>
-void
-PersistentDescriptorsListSampleGenerator<TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample>
-::ThreadedGenerateData(const RegionType& outputRegionForThread,
- itk::ThreadIdType threadId)
-{
- ListSampleType* listSample = m_ThreadListSample[threadId];
- LabelListSampleType* labelListSample = m_ThreadLabelListSample[threadId];
- SamplesPositionType& samplesPosition = m_ThreadSamplesPosition[threadId];
-
- VectorDataTreeIteratorType vectorDataIt(this->GetSamplesLocations()->GetDataTree());
- bool isInitialized = false;
-
- for (vectorDataIt.GoToBegin(); !vectorDataIt.IsAtEnd(); ++vectorDataIt)
- {
- if (vectorDataIt.Get()->IsPointFeature())
- {
- VectorDataPointType point = vectorDataIt.Get()->GetPoint();
- ContinuousIndexType cidx;
- this->GetInput()->TransformPhysicalPointToContinuousIndex(point, cidx);
-
- RegionType paddedRegion = outputRegionForThread;
- paddedRegion.PadByRadius(m_NeighborhoodRadius);
- if (this->IsInsideWithNeighborhoodRadius(paddedRegion, cidx))
- {
- // Set the Measurement Vector Size of the samplelists, once
- if(!isInitialized)
- {
- // output list sample
- listSample->SetMeasurementVectorSize(m_DescriptorsFunction->Evaluate(point).Size());
- labelListSample->SetMeasurementVectorSize(LabelMeasurementVectorType::Length);
- isInitialized = true;
- }
-
- SampleMeasurementVectorType sample(m_DescriptorsFunction->Evaluate(point));
- listSample->PushBack( sample );
-
- LabelMeasurementVectorType label;
- label[0] = static_cast<LabelMeasurementType>(vectorDataIt.Get()->GetFieldAsInt("Class"));
- labelListSample->PushBack( label );
-
- samplesPosition.push_back(point);
- }
- }
- }
-}
-
-
-template <class TInputImage, class TVectorData, class TListSample, class TLabelListSample, class TOutputPrecision, class TCoordRep>
-DescriptorsListSampleGenerator<TInputImage, TVectorData, TListSample, TLabelListSample, TOutputPrecision, TCoordRep>
-::DescriptorsListSampleGenerator()
-{
-
-
-}
-
-template <class TInputImage, class TVectorData, class TListSample, class TLabelListSample, class TOutputPrecision, class TCoordRep>
-DescriptorsListSampleGenerator<TInputImage, TVectorData, TListSample, TLabelListSample, TOutputPrecision, TCoordRep>
-::~DescriptorsListSampleGenerator()
-{
-
-}
-
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.h b/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.h
deleted file mode 100644
index f4c79f003f9b7a1c7e5c3841720e9b9979bac03e..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.h
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbFlusserMomentsIFFactory_h
-#define otbFlusserMomentsIFFactory_h
-
-#include "itkLightObject.h"
-
-#include "otbMetaImageFunction.h"
-#include "itkDataObject.h"
-#include "otbImage.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbFlusserMomentsImageFunction.h"
-
-
-namespace otb
-{
-/** \class FlusserMomentsFFactory
- * \brief add a FlusserMoments image function to a
- * MetaImageFunction
- *
- * This class aims at adding an adapted
- * FlusserMomentsImageFunction to an existing
- * MetaImageFunction through the method Create.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TImageType, class TCoordRep = double, class TPrecision = double>
-class ITK_EXPORT FlusserMomentsIFFactory :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef FlusserMomentsIFFactory Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(FlusserMomentsIFFactory, itk::LightObject);
-
- // Input and output typedef
- typedef TImageType InputImageType;
- typedef TCoordRep CoordRepType;
- typedef TPrecision PrecisionType;
-
- // Other typedef
- typedef typename MetaImageFunction<TPrecision>::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<PrecisionType> ParamContainerType;
- typedef FlusserMomentsImageFunction<InputImageType, CoordRepType>
- FlusserMomentsIF;
- typedef ImageFunctionAdaptor<FlusserMomentsIF, TPrecision>
- AdaptedFlusserMomentsIF;
-
- void Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container);
-
-protected:
- FlusserMomentsIFFactory(){}
- ~FlusserMomentsIFFactory() override{}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- FlusserMomentsIFFactory(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbFlusserMomentsIFFactory.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.hxx b/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.hxx
deleted file mode 100644
index 6aa08394d2145baf8474c072587f9b2757430419..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbFlusserMomentsIFFactory.hxx
+++ /dev/null
@@ -1,55 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbFlusserMomentsIFFactory_hxx
-#define otbFlusserMomentsIFFactory_hxx
-
-#include "otbFlusserMomentsIFFactory.h"
-
-
-namespace otb
-{
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-FlusserMomentsIFFactory<TImageType, TCoordRep, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-FlusserMomentsIFFactory<TImageType, TCoordRep, TPrecision>
-::Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container)
-{
- typename AdaptedFlusserMomentsIF::Pointer function = AdaptedFlusserMomentsIF::New();
-
- function->SetInputImage(image);
- function->GetInternalImageFunction()->SetNeighborhoodRadius(param[0]);
-
- metaIF->AddFunction(function);
- container->push_back(image);
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.h b/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.h
deleted file mode 100644
index e89dbcf376b2d11fc590b07ce0012e6045c35cab..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.h
+++ /dev/null
@@ -1,98 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbFourierMellinDescriptorsIFFactory_h
-#define otbFourierMellinDescriptorsIFFactory_h
-
-#include "itkLightObject.h"
-
-#include "otbMetaImageFunction.h"
-#include "itkDataObject.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbFourierMellinDescriptorsImageFunction.h"
-
-
-namespace otb
-{
-/** \class FourierMellinDescriptorsFFactory
- * \brief add a FourierMellinDescriptors image function to a
- * MetaImageFunction
- *
- * This class aims at adding an adapted
- * FourierMellinDescriptorsImageFunction to an existing
- * MetaImageFunction through the method Create.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TImageType, class TCoordRep = double, class TPrecision = double>
-class ITK_EXPORT FourierMellinDescriptorsIFFactory :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef FourierMellinDescriptorsIFFactory Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(FourierMellinDescriptorsIFFactory, itk::LightObject);
-
- // Input and output typedef
- typedef TImageType InputImageType;
- typedef TCoordRep CoordRepType;
- typedef TPrecision PrecisionType;
-
- // Other typedef
- typedef typename MetaImageFunction<TPrecision>::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<PrecisionType> ParamContainerType;
- typedef FourierMellinDescriptorsImageFunction<InputImageType, CoordRepType>
- FourierMellinDescriptorsIF;
- typedef ImageFunctionAdaptor<FourierMellinDescriptorsIF, TPrecision>
- AdaptedFourierMellinDescriptorsIF;
-
- void Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container);
-
-protected:
- FourierMellinDescriptorsIFFactory(){}
- ~FourierMellinDescriptorsIFFactory() override{}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- FourierMellinDescriptorsIFFactory(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbFourierMellinDescriptorsIFFactory.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.hxx b/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.hxx
deleted file mode 100644
index bb19f36cf7a608203ca02e2fffd12a8bbb729951..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbFourierMellinDescriptorsIFFactory.hxx
+++ /dev/null
@@ -1,57 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbFourierMellinDescriptorsIFFactory_hxx
-#define otbFourierMellinDescriptorsIFFactory_hxx
-
-#include "otbFourierMellinDescriptorsIFFactory.h"
-
-
-namespace otb
-{
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-FourierMellinDescriptorsIFFactory<TImageType, TCoordRep, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-FourierMellinDescriptorsIFFactory<TImageType, TCoordRep, TPrecision>
-::Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container)
-{
- typename AdaptedFourierMellinDescriptorsIF::Pointer function = AdaptedFourierMellinDescriptorsIF::New();
-
- function->SetInputImage(image);
- function->GetInternalImageFunction()->SetNeighborhoodRadius(param[0]);
- function->GetInternalImageFunction()->SetPmax(param[1]);
- function->GetInternalImageFunction()->SetQmax(param[2]);
-
- metaIF->AddFunction(function);
- container->push_back(image);
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.h b/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.h
deleted file mode 100644
index b00367a73b0b655ddfc57f2305cc15e18922636e..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.h
+++ /dev/null
@@ -1,100 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbHaralickTexturesIFFactory_h
-#define otbHaralickTexturesIFFactory_h
-
-#include "itkLightObject.h"
-
-#include "otbMetaImageFunction.h"
-#include "itkDataObject.h"
-#include "otbImage.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbHaralickTexturesImageFunction.h"
-
-
-namespace otb
-{
-/** \class HaralickTexturesFFactory
- * \brief add a HaralickTextures image function to a
- * MetaImageFunction
- *
- * This class aims at adding an adapted
- * HaralickTexturesImageFunction to an existing
- * MetaImageFunction through the method Create.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TImageType, class TCoordRep = double, class TPrecision = double>
-class ITK_EXPORT HaralickTexturesIFFactory :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef HaralickTexturesIFFactory Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(haralickTexturesIFFactory, itk::LightObject);
-
- // Input and output typedef
- typedef TImageType InputImageType;
- typedef TCoordRep CoordRepType;
- typedef TPrecision PrecisionType;
-
- // Other typedef
- typedef typename MetaImageFunction<TPrecision>::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<PrecisionType> ParamContainerType;
- typedef HaralickTexturesImageFunction<InputImageType, CoordRepType>
- HaralickTexturesIF;
- typedef typename HaralickTexturesIF::OffsetType OffsetType;
- typedef ImageFunctionAdaptor<HaralickTexturesIF, TPrecision>
- AdaptedHaralickTexturesIF;
-
- void Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container);
-
-protected:
- HaralickTexturesIFFactory(){}
- ~HaralickTexturesIFFactory() override{}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- HaralickTexturesIFFactory(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbHaralickTexturesIFFactory.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.hxx b/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.hxx
deleted file mode 100644
index fe1d2934f0fce071bc89d7bd8d7f66964c21a8a7..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbHaralickTexturesIFFactory.hxx
+++ /dev/null
@@ -1,62 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbHaralickTexturesIFFactory_hxx
-#define otbHaralickTexturesIFFactory_hxx
-
-#include "otbHaralickTexturesIFFactory.h"
-
-
-namespace otb
-{
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-HaralickTexturesIFFactory<TImageType, TCoordRep, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-HaralickTexturesIFFactory<TImageType, TCoordRep, TPrecision>
-::Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container)
-{
- typename AdaptedHaralickTexturesIF::Pointer function = AdaptedHaralickTexturesIF::New();
-
- function->SetInputImage(image);
- function->GetInternalImageFunction()->SetNeighborhoodRadius(param[0]);
- function->SetInputImageMinimum(param[1]);
- function->SetInputImageMaximum(param[2]);
- function->SetNumberOfBinsPerAxis(param[3]);
-
- OffsetType offset;
- offset.Fill(param[4]);
- function->GetInternalImageFunction()->SetOffset(offset);
-
- metaIF->AddFunction(function);
- container->push_back(image);
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.h b/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.h
deleted file mode 100644
index 9dd970997cbdc27a374e2fd22f6a8c59070f01eb..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.h
+++ /dev/null
@@ -1,158 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLabeledSampleLocalizationGenerator_h
-#define otbLabeledSampleLocalizationGenerator_h
-
-#include "otbVectorDataSource.h"
-#include "otbVectorData.h"
-#include "itkPreOrderTreeIterator.h"
-#include "itkMersenneTwisterRandomVariateGenerator.h"
-#include "itkEuclideanDistanceMetric.h"
-#include <string>
-
-
-namespace otb
-{
-/** \class LabeledSampleLocalizationGenerator
- * \brief Produces a VectorData from potentialy multiple VectorData
- *
- * This generator produces a unique vector data containing labeled positions
- * extracted from inputs.
- *
- * Input points are transmitted to the output. In addition, 'no class'
- * points are randomly picked inside input polygons making sure
- * they are at least at a given distance (InhibitionRadius) of every
- * known points.
- *
- * Classes are specified by the VectorData with a metadata field identified by
- * a specific key. This key can be provided by the SetClassKey() method
- * (using "Class" as a default key).
- * The field is retrieved by GetFieldAsInt(), thus must be int-compatible
- *
- *
- * \ingroup OTBObjectDetection
- */
-template <class TVectorData>
-class ITK_EXPORT LabeledSampleLocalizationGenerator :
- public VectorDataSource<TVectorData>
-{
-public:
- /** Standard class typedefs */
- typedef LabeledSampleLocalizationGenerator Self;
- typedef VectorDataSource<TVectorData> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(LabeledSampleLocalizationGenerator, VectorDataSource);
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- typedef TVectorData VectorDataType;
- typedef typename VectorDataType::Pointer VectorDataPointerType;
- typedef typename VectorDataType::DataNodeType DataNodeType;
- typedef typename DataNodeType::PolygonType::RegionType RegionType;
- typedef typename DataNodeType::PointType PointType;
- typedef typename DataNodeType::PolygonType::VertexType VertexType;
- typedef typename std::vector<PointType> PointVectorType;
-
- typedef itk::PreOrderTreeIterator<typename VectorDataType::DataTreeType> TreeIteratorType;
-
- typedef itk::Statistics::MersenneTwisterRandomVariateGenerator RandomGeneratorType;
- typedef itk::Statistics::EuclideanDistanceMetric<PointType> EuclideanDistanceMetricType;
-
- /** Connects the VectorDatas from which the localizations are going to be extracted. */
- using Superclass::PushBackInput;
- void PushBackInput(const VectorDataType *);
- const VectorDataType * GetInput(unsigned int idx) const;
-
- /** Field name containing the class identifier */
- itkGetConstMacro(ClassKey, std::string);
- itkSetMacro(ClassKey, std::string);
-
- /** Identifier for the negative samples class */
- itkGetConstMacro(NoClassIdentifier, int);
- itkSetMacro(NoClassIdentifier, int);
-
- /** The density of auto-generated negative samples inside the polygons */
- itkGetConstMacro(RandomLocalizationDensity, double);
- itkSetMacro(RandomLocalizationDensity, double);
-
- /** The minimum distance between a generated negative sample and positive samples */
- itkGetConstMacro(InhibitionRadius, double);
- itkSetMacro(InhibitionRadius, double);
-
- /** The maximum iteration number during negative sample positions */
- itkGetConstMacro(NbMaxIteration, unsigned long int);
- itkSetMacro(NbMaxIteration, unsigned long int);
-
- /** Set the number of samples position to generate inside the inhibition radius window around a positive point */
- itkGetConstMacro(NumberOfPositiveSamplesPerPoint, unsigned int);
- itkSetMacro(NumberOfPositiveSamplesPerPoint, unsigned int);
-
- /** Set the seed for random number generator */
- void SetSeed(unsigned int seed)
- {
- m_RandomGenerator->SetSeed(seed);
- }
-
-protected:
- LabeledSampleLocalizationGenerator();
- ~LabeledSampleLocalizationGenerator() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- /** Triggers the Computation of the sample list */
- void GenerateData(void) override;
-
- PointVectorType RandomPointsGenerator(DataNodeType * node);
-
- PointVectorType PointDensification(DataNodeType * node);
-
-private:
- LabeledSampleLocalizationGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- std::string GetNextID()
- {
- std::ostringstream oss;
- oss << m_CurrentID++;
- return oss.str();
- }
-
- RandomGeneratorType::Pointer m_RandomGenerator;
-
- std::string m_ClassKey;
- int m_NoClassIdentifier;
- double m_RandomLocalizationDensity;
- double m_InhibitionRadius;
- unsigned long int m_NbMaxIteration;
- unsigned int m_NumberOfPositiveSamplesPerPoint;
- unsigned int m_CurrentID;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbLabeledSampleLocalizationGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.hxx b/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.hxx
deleted file mode 100644
index dc0869fc214e889a64dc9f410a6b106545e14574..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbLabeledSampleLocalizationGenerator.hxx
+++ /dev/null
@@ -1,301 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLabeledSampleLocalizationGenerator_hxx
-#define otbLabeledSampleLocalizationGenerator_hxx
-
-#include "otbLabeledSampleLocalizationGenerator.h"
-
-#include "otbMath.h"
-
-namespace otb
-{
-template<class TVectorData>
-LabeledSampleLocalizationGenerator<TVectorData>
-::LabeledSampleLocalizationGenerator() :
- m_ClassKey("Class"),
- m_NoClassIdentifier(0),
- m_RandomLocalizationDensity(.005),
- m_InhibitionRadius(5.0),
- m_NbMaxIteration(10000),
- m_NumberOfPositiveSamplesPerPoint(50),
- m_CurrentID(0)
-{
- this->SetNumberOfRequiredInputs(1);
- this->SetNumberOfRequiredOutputs(1);
-
- m_RandomGenerator = RandomGeneratorType::GetInstance();
-}
-
-template <class TVectorData>
-void
-LabeledSampleLocalizationGenerator<TVectorData>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- this->Superclass::PrintSelf(os, indent);
- os << indent << "Class Key: " << m_ClassKey << std::endl;
- os << indent << "Negative Class Identifier: " << m_NoClassIdentifier << std::endl;
- os << indent << "Sampling Density: " << m_RandomLocalizationDensity << std::endl;
- os << indent << "Inhibition Radius: " << m_InhibitionRadius << std::endl;
-}
-
-
-template <class TVectorData>
-void
-LabeledSampleLocalizationGenerator<TVectorData>
-::PushBackInput(const VectorDataType * vectorData)
-{
- this->Superclass::SetNthInput(this->GetNumberOfIndexedInputs(), const_cast<VectorDataType *>(vectorData));
-}
-
-template <class TVectorData>
-const TVectorData *
-LabeledSampleLocalizationGenerator<TVectorData>
-::GetInput(unsigned int idx) const
-{
- if (this->GetNumberOfInputs() < idx)
- {
- return nullptr;
- }
-
- return static_cast<const VectorDataType *>(this->Superclass::GetInput(idx));
-}
-
-template <class TVectorData>
-typename LabeledSampleLocalizationGenerator<TVectorData>
-::PointVectorType
-LabeledSampleLocalizationGenerator<TVectorData>
-::PointDensification(DataNodeType * node)
-{
-
- PointVectorType pPoint;
- PointType centerPoint = node->GetPoint();
-
- for(unsigned int i = 0; i < m_NumberOfPositiveSamplesPerPoint; ++i)
- {
- PointType point;
- for(unsigned int dim = 0; dim < 2; ++dim)
- {
- point[dim] = centerPoint[dim]+this->m_RandomGenerator->GetUniformVariate(-m_InhibitionRadius, m_InhibitionRadius);
- }
- pPoint.push_back(point);
- }
- return pPoint;
-}
-
-template <class TVectorData>
-typename LabeledSampleLocalizationGenerator<TVectorData>
-::PointVectorType
-LabeledSampleLocalizationGenerator<TVectorData>
-::RandomPointsGenerator(DataNodeType * node)
-{
- // Output
- PointVectorType vPoint;
-
- // Euclidean distance
- typename EuclideanDistanceMetricType::Pointer euclideanDistanceMetric = EuclideanDistanceMetricType::New();
-
- // Gathering Information
- RegionType generatorRegion = node->GetPolygonExteriorRing()->GetBoundingRegion();
- typename RegionType::SizeType generatorRegionSize = generatorRegion.GetSize();
- typename RegionType::IndexType generatorRegionIndex = generatorRegion.GetIndex();
- //typename RegionType::IndexType generatorRegionOrigin = generatorRegion.GetOrigin();
-
- // Identify inside known points
- std::vector<PointType> insiders;
- typename VectorDataType::ConstPointer vectorData = static_cast<const VectorDataType *>(this->GetOutput(0));
- TreeIteratorType itVector(vectorData->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPointFeature() && itVector.Get()->GetFieldAsInt(m_ClassKey) != m_NoClassIdentifier)
- {
- VertexType vertex;
- vertex[0] = itVector.Get()->GetPoint()[0];
- vertex[1] = itVector.Get()->GetPoint()[1];
-
- if(node->GetPolygonExteriorRing()->IsInside(vertex))
- {
- insiders.push_back(itVector.Get()->GetPoint());
- }
- }
- ++itVector;
- }
-
- // Generation
- unsigned int nbMaxPosition = (unsigned int)(node->GetPolygonExteriorRing()->GetArea()
- * this->GetRandomLocalizationDensity());
- unsigned long int nbIter = this->GetNbMaxIteration();
- unsigned int nbPosition = nbMaxPosition;
-
- PointType rangeMin, rangeMax;
-
- for(unsigned int dim = 0; dim < 2; ++dim)
- {
- rangeMin[dim] = generatorRegionIndex[dim];
- rangeMax[dim] = generatorRegionIndex[dim] + generatorRegionSize[dim];
- }
-
- while(nbIter > 0 && nbPosition > 0)
- {
- VertexType candidate;
- for(unsigned int dim = 0; dim < 2; ++dim)
- {
- candidate[dim] = this->m_RandomGenerator->GetUniformVariate(rangeMin[dim], rangeMax[dim]);
- }
-
- if(node->GetPolygonExteriorRing()->IsInside(candidate))
- {
- typename PointVectorType::const_iterator pit = insiders.begin();
- bool valid = true;
-
- while(valid && pit!=insiders.end())
- {
- valid = (euclideanDistanceMetric->Evaluate(candidate, *pit) > this->GetInhibitionRadius());
- ++pit;
- }
- PointType point;
- point[0] = candidate[0];
- point[1] = candidate[1];
- if(valid)
- {
- vPoint.push_back(point);
- }
- nbPosition --;
- }
- nbIter --;
- }
- return vPoint;
-}
-
-template <class TVectorData>
-void
-LabeledSampleLocalizationGenerator<TVectorData>
-::GenerateData()
-{
- unsigned int nbInputs = this->GetNumberOfInputs();
-
- this->GetOutput(0)->SetMetaDataDictionary(this->GetInput(0)->GetMetaDataDictionary());
-
- // Retrieving root node
- typename DataNodeType::Pointer root = this->GetOutput(0)->GetDataTree()->GetRoot()->Get();
- // Create the document node
- typename DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- this->GetOutput(0)->GetDataTree()->Add(document, root);
-
- std::string positiveClassIdentifier;
- bool firstFeature = true;
- // Copy all point feature in output VectorData
- for (unsigned int i=0; i<nbInputs; ++i)
- {
- typename VectorDataType::ConstPointer vectorData = static_cast<const VectorDataType *>(this->GetInput(i));
-
- TreeIteratorType itVector(vectorData->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPointFeature())
- {
- //Get the value of the positive value of
- if (firstFeature)
- {
- positiveClassIdentifier = itVector.Get()->GetFieldAsString(m_ClassKey);
- firstFeature = false;
- }
- // Duplicate input feature
- typename DataNodeType::Pointer currentGeometry = DataNodeType::New();
- currentGeometry->SetNodeId(this->GetNextID());
- currentGeometry->SetNodeType(otb::FEATURE_POINT);
- currentGeometry->SetPoint(itVector.Get()->GetPoint());
-
- std::vector<std::string> fields = itVector.Get()->GetFieldList();
- for (std::vector<std::string>::const_iterator it = fields.begin(); it != fields.end(); ++it)
- {
- currentGeometry->SetFieldAsString( *it, itVector.Get()->GetFieldAsString(*it) );
- // The PositiveClass identifier must be an attribute of the class
-
- }
-
- this->GetOutput(0)->GetDataTree()->Add(currentGeometry, document);
- }
- ++itVector;
- }
- }
-
- // Iterates through the polygon features and generates random point inside the polygon with
- // the "NoClass" identifier
- for (unsigned int i=0; i<nbInputs; ++i)
- {
- typename VectorDataType::ConstPointer vectorData = static_cast<const VectorDataType *>(this->GetInput(i));
-
- TreeIteratorType itVector(vectorData->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPolygonFeature())
- {
- PointVectorType vPoints = RandomPointsGenerator(itVector.Get());
-
- for (typename PointVectorType::const_iterator it = vPoints.begin(); it != vPoints.end(); ++it)
- {
- typename DataNodeType::Pointer currentGeometry = DataNodeType::New();
- currentGeometry->SetNodeId(this->GetNextID());
- currentGeometry->SetNodeType(otb::FEATURE_POINT);
- currentGeometry->SetPoint(*it);
- currentGeometry->SetFieldAsInt(this->GetClassKey(), this->GetNoClassIdentifier());
- this->GetOutput(0)->GetDataTree()->Add(currentGeometry, document);
- }
- }
- ++itVector;
- }
- }
- // Densify positive points
- for (unsigned int i=0; i<nbInputs; ++i)
- {
- typename VectorDataType::ConstPointer vectorData = static_cast<const VectorDataType *>(this->GetInput(i));
-
- TreeIteratorType itVector(vectorData->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPointFeature())
- {
- PointVectorType pPoints = PointDensification(itVector.Get());
-
- for (typename PointVectorType::const_iterator it = pPoints.begin(); it != pPoints.end(); ++it)
- {
- typename DataNodeType::Pointer currentGeometry = DataNodeType::New();
- currentGeometry->SetNodeId(this->GetNextID());
- currentGeometry->SetNodeType(otb::FEATURE_POINT);
- currentGeometry->SetPoint(*it);
- currentGeometry->SetFieldAsInt(this->GetClassKey(), atoi(positiveClassIdentifier.c_str()) );
- this->GetOutput(0)->GetDataTree()->Add(currentGeometry, document);
- }
- }
- ++itVector;
- }
- }
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.h b/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.h
deleted file mode 100644
index 1747e5912b28fce922d3a4a04633ac461138b703..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.h
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLocalHistogramIFFactory_h
-#define otbLocalHistogramIFFactory_h
-
-#include "itkLightObject.h"
-
-#include "otbMetaImageFunction.h"
-#include "itkDataObject.h"
-#include "otbImage.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbLocalHistogramImageFunction.h"
-
-
-namespace otb
-{
-/** \class LocalHistogramIFFactory
- * \brief add a LocalHistogram image function to a
- * MetaImageFunction
- *
- * This class aims at adding an adapted
- * LocalHistogramImageFunction to an existing MetaImageFunction
- * through the method Create.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TImageType, class TCoordRep = double, class TPrecision = double>
-class ITK_EXPORT LocalHistogramIFFactory :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef LocalHistogramIFFactory Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(LocalHistogramIFFactory, itk::LightObject);
-
- // Input and output typedef
- typedef TImageType InputImageType;
- typedef TCoordRep CoordRepType;
- typedef TPrecision PrecisionType;
-
- // Other typedef
- typedef typename MetaImageFunction<TPrecision>::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<PrecisionType> ParamContainerType;
- typedef LocalHistogramImageFunction<InputImageType, CoordRepType>
- LocalHistogramIF;
- typedef ImageFunctionAdaptor<LocalHistogramIF, TPrecision>
- AdaptedLocalHistogramIF;
-
- void Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container);
-
-protected:
- LocalHistogramIFFactory(){}
- ~LocalHistogramIFFactory() override{}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- LocalHistogramIFFactory(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbLocalHistogramIFFactory.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.hxx b/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.hxx
deleted file mode 100644
index c3c8d27695fc7d38089f79700f988ef4b7a1ccda..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbLocalHistogramIFFactory.hxx
+++ /dev/null
@@ -1,58 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLocalHistogramIFFactory_hxx
-#define otbLocalHistogramIFFactory_hxx
-
-#include "otbLocalHistogramIFFactory.h"
-
-
-namespace otb
-{
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-LocalHistogramIFFactory<TImageType, TCoordRep, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-LocalHistogramIFFactory<TImageType, TCoordRep, TPrecision>
-::Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container)
-{
- typename AdaptedLocalHistogramIF::Pointer function = AdaptedLocalHistogramIF::New();
-
- function->SetInputImage(image);
- function->GetInternalImageFunction()->SetNeighborhoodRadius(param[0]);
- function->GetInternalImageFunction()->SetNumberOfHistogramBins(param[1]);
- function->GetInternalImageFunction()->SetHistogramMin(param[2]);
- function->GetInternalImageFunction()->SetHistogramMax(param[3]);
-
- metaIF->AddFunction(function);
- container->push_back(image);
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbMultiChannelIFFactory.h b/Modules/Detection/ObjectDetection/include/otbMultiChannelIFFactory.h
deleted file mode 100644
index a99de90d24b8365f194f87f2966e227d4b7abb3e..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbMultiChannelIFFactory.h
+++ /dev/null
@@ -1,136 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMultiChannelIFFactory_h
-#define otbMultiChannelIFFactory_h
-
-#include "otbVectorImageToImageListFilter.h"
-#include "otbVectorImage.h"
-#include "otbImage.h"
-#include "otbImageList.h"
-#include "itkDataObject.h"
-#include "otbMetaImageFunction.h"
-
-
-namespace otb
-{
-/** \class MultiChannelIFFactory
- * \brief Yhis class handle the image type before the use of an
- * image function factory
- *
- * According to the image type, the Create method of this class can
- * call an ImageFunctionFactory for each band of the input image or
- * once if the image type is otb::Image.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TIFFactory, class TInputImage>
-class MultiChannelIFFactory
-{
-public:
- typedef TIFFactory IFFactoryType;
- typedef TInputImage InputImageType;
- typedef typename IFFactoryType::Pointer IFFactoryPointerType;
- typedef typename IFFactoryType::InputImageType ImageType;
- typedef typename IFFactoryType::CoordRepType CoordRepType;
- typedef typename IFFactoryType::PrecisionType PrecisionType;
- typedef typename std::vector<PrecisionType> ParameterContainerType;
- typedef typename std::vector<itk::DataObject::Pointer> ImageContainer;
- typedef typename MetaImageFunction<PrecisionType>::Pointer MetaIFPointerType;
-
- typedef ImageList<ImageType> ImageListType;
- typedef VectorImageToImageListFilter<InputImageType,
- ImageListType> VIToILFilterType;
-
- void Create(InputImageType * image,
- ParameterContainerType param,
- MetaIFPointerType metaIF,
- ImageContainer * container)
- {
- m_Factory->Create(image, param, metaIF, container);
- }
-
- MultiChannelIFFactory()
- {
- m_Factory = IFFactoryType::New();
- }
-
- virtual ~MultiChannelIFFactory(){};
-
-private:
- IFFactoryPointerType m_Factory;
-
-};
-
-
-template <class TIFFactory, typename TPixel, unsigned int VImageDimension>
-class MultiChannelIFFactory<TIFFactory, otb::VectorImage<TPixel, VImageDimension> >
-{
-public:
- typedef TIFFactory IFFactoryType;
- typedef typename IFFactoryType::Pointer IFFactoryPointerType;
- typedef typename IFFactoryType::InputImageType ImageType;
- typedef typename IFFactoryType::CoordRepType CoordRepType;
- typedef typename IFFactoryType::PrecisionType PrecisionType;
- typedef VectorImage<TPixel, 2> InputImageType;
-
- typedef typename std::vector<PrecisionType> ParameterContainerType;
- typedef typename std::vector<itk::DataObject::Pointer> ImageContainer;
- typedef typename MetaImageFunction<PrecisionType>::Pointer MetaIFPointerType;
-
- typedef ImageList<ImageType> ImageListType;
- typedef VectorImageToImageListFilter<InputImageType,
- ImageListType> VIToILFilterType;
-
- void Create(InputImageType * image,
- ParameterContainerType param,
- MetaIFPointerType metaIF,
- ImageContainer * container)
- {
- unsigned int nbBand;
- typename VIToILFilterType::Pointer filter = VIToILFilterType::New();
-
- filter->SetInput(image);
- filter->UpdateOutputInformation();
- nbBand = filter->GetOutput()->Size();
-
- for (unsigned int i=0; i<nbBand; ++i)
- {
- filter->GetOutput()->GetNthElement(i)->UpdateOutputInformation();
- m_Factory->Create(filter->GetOutput()->GetNthElement(i), param, metaIF, container);
- }
- }
-
- MultiChannelIFFactory()
- {
- m_Factory = IFFactoryType::New();
- }
-
- virtual ~MultiChannelIFFactory(){};
-
-private:
- IFFactoryPointerType m_Factory;
-
-};
-} //end namespace
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.h b/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.h
deleted file mode 100644
index 01d371d964df9245b8c225f546f4c09429cf1730..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.h
+++ /dev/null
@@ -1,393 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbObjectDetectionClassifier_h
-#define otbObjectDetectionClassifier_h
-
-#include <vector>
-#include <string>
-
-#include "itkImageRegion.h"
-#include "itkFixedArray.h"
-#include "itkVariableLengthVector.h"
-#include "itkListSample.h"
-#include "itkDataObjectDecorator.h"
-#include "itkSimpleDataObjectDecorator.h"
-#include "itkFunctionBase.h"
-
-#include "otbVectorData.h"
-#include "otbMachineLearningModel.h"
-#include "otbPersistentImageFilter.h"
-#include "otbPersistentFilterStreamingDecorator.h"
-
-namespace otb
-{
-
-template <class TFunctionPrecision>
-class DefaultDescriptorType
-{
-public:
- typedef itk::VariableLengthVector<TFunctionPrecision> Type;
-};
-
-/** \class PersistentObjectDetectionClassifier
- * \brief [internal] Helper class for the implementation of ObjectDetectionClassifier
- * with streaming capabilities
- *
- * This class inherits PersistentImageFilter and provides the Reset/Synthesize functions,
- * plus the ThreadedGenerateData function implementing the image function evaluation
- *
- *
- * \ingroup OTBObjectDetection
- */
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-class ITK_EXPORT PersistentObjectDetectionClassifier :
- public PersistentImageFilter<TInputImage, TInputImage>
-{
-public:
- /** Standard Self typedef */
- typedef PersistentObjectDetectionClassifier Self;
- typedef PersistentImageFilter<TInputImage, TInputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Runtime information support. */
- itkTypeMacro(PersistentObjectDetectionClassifier, PersistentImageFilter);
-
- /** Image related typedefs. */
- typedef TInputImage InputImageType;
- typedef typename TInputImage::Pointer InputImagePointer;
- typedef typename TInputImage::RegionType RegionType;
- typedef typename TInputImage::SizeType SizeType;
- typedef typename TInputImage::IndexType IndexType;
- typedef typename TInputImage::PixelType PixelType;
-
- itkStaticConstMacro(InputImageDimension, unsigned int,
- TInputImage::ImageDimension);
-
- /** Image related typedefs. */
- itkStaticConstMacro(ImageDimension, unsigned int,
- TInputImage::ImageDimension);
-
- /** Smart Pointer type to a DataObject. */
- typedef typename itk::DataObject::Pointer DataObjectPointer;
- typedef itk::ProcessObject::DataObjectPointerArraySizeType DataObjectPointerArraySizeType;
-
- /** Input VectorData */
- typedef TOutputVectorData VectorDataType;
- typedef typename VectorDataType::Pointer VectorDataObjectType;
- typedef typename VectorDataType::DataNodeType VectorDataNodeType;
- typedef typename VectorDataType::DataNodePointerType VectorDataNodePointerType;
- typedef typename VectorDataType::DataTreeType VectorDataTreeType;
- typedef typename VectorDataType::DataTreePointerType VectorDataTreePointerType;
- typedef typename VectorDataNodeType::PointType VectorDataPointType;
- typedef typename VectorDataNodeType::LineType VectorDataLineType;
- typedef typename VectorDataNodeType::PolygonType VectorDataPolygonType;
- typedef itk::PreOrderTreeIterator<VectorDataTreeType> VectorDataTreeIteratorType;
-
- /** Function type for descriptors extraction */
- typedef TFunctionType DescriptorsFunctionType;
- typedef typename DescriptorsFunctionType::Pointer DescriptorsFunctionPointerType;
- typedef typename DescriptorsFunctionType::InputType DescriptorsFunctionPointType;
- typedef typename DescriptorsFunctionType::OutputType DescriptorType;
- typedef typename DescriptorType::ValueType DescriptorPrecision;
-
- typedef itk::ContinuousIndex
- <typename DescriptorsFunctionPointType::ValueType,
- itkGetStaticConstMacro(InputImageDimension)> ContinuousIndexType;
-
- /** TLabel output */
- typedef TLabel LabelType;
- typedef MachineLearningModel<DescriptorPrecision, LabelType> ModelType;
- typedef typename ModelType::Pointer ModelPointerType;
- typedef typename ModelType::InputSampleType ModelMeasurementType;
-
- typedef itk::Statistics::ListSample<DescriptorType> ListSampleType;
-
- void AddInput(itk::DataObject * dataObject) override
- {
- this->Superclass::AddInput(dataObject);
- }
-
- /** learning model used for classification */
- void SetModel(ModelType * model);
-
- const ModelType* GetModel(void) const;
-
- VectorDataType* GetOutputVectorData(void);
-
- /** The function to evaluate */
- itkSetObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
- itkGetObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
- itkGetConstObjectMacro(DescriptorsFunction, DescriptorsFunctionType);
-
- itkSetMacro( NeighborhoodRadius, unsigned int );
- itkGetConstReferenceMacro( NeighborhoodRadius, unsigned int );
-
- itkGetConstMacro(ClassKey, std::string);
- itkSetMacro(ClassKey, std::string);
-
- itkGetMacro(NoClassLabel, LabelType);
- itkSetMacro(NoClassLabel, LabelType);
-
- /** Set/Get the Shifts for this sample list */
- itkGetMacro(Shifts, DescriptorType);
- itkSetMacro(Shifts, DescriptorType);
- itkGetMacro(Scales, DescriptorType);
- itkSetMacro(Scales, DescriptorType);
-
- /** Set/Get the grid step for detection */
- itkSetMacro(GridStep, unsigned int);
- itkGetMacro(GridStep, unsigned int);
-
- /** Make a DataObject of the correct type to be used as the specified
- * output. */
- itk::DataObject::Pointer MakeOutput(DataObjectPointerArraySizeType idx) override;
- using Superclass::MakeOutput;
-
- void AllocateOutputs() override;
-
- void GenerateOutputInformation() override;
-
- void Reset(void) override;
-
- void Synthetize(void) override;
-
-protected:
- PersistentObjectDetectionClassifier();
- ~PersistentObjectDetectionClassifier() override;
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- void GenerateInputRequestedRegion() override;
-
- void BeforeThreadedGenerateData() override;
-
- /** Multi-thread version GenerateData. */
- void ThreadedGenerateData(const RegionType& outputRegionForThread,
- itk::ThreadIdType threadId) override;
-
-private:
- PersistentObjectDetectionClassifier(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- template <typename TCoordRepType>
- bool
- IsInsideWithNeighborhoodRadius(const RegionType& region, const ContinuousIndexType &index) const
- {
- typedef typename IndexType::IndexValueType IndexValueType;
-
- for(unsigned int i=0; i<ImageDimension; ++i)
- {
- if( itk::Math::RoundHalfIntegerUp<IndexValueType>(index[i]) < static_cast<IndexValueType>( region.GetIndex(i) ) + m_NeighborhoodRadius + 1 )
- //Comment this instruction after itkv4 migration (correct
- //usage of centered-pixel coordinates)
- //if( index[i] < static_cast<TCoordRepType>( region.GetIndex(i) ) + m_NeighborhoodRadius )
- {
- return false;
- }
- // bound is the last valid pixel location
- const TCoordRepType bound = static_cast<TCoordRepType>(
- region.GetIndex(i) + region.GetSize(i) - 0.5);
- //Comment this instruction after itkv4 migration (correct
- //usage of centered-pixel coordinates)
- //const TCoordRepType bound = static_cast<TCoordRepType>(
- // region.GetIndex(i) + static_cast<IndexValueType>(region.GetSize(i)) - 1);
- if( index[i] > bound - m_NeighborhoodRadius - 1 )
- {
- return false;
- }
- }
- return true;
- }
-
- typedef std::pair<DescriptorsFunctionPointType, LabelType> DetectedPoint;
- typedef std::vector<DetectedPoint> PointArray;
- typedef std::vector<PointArray> PointArrayContainer;
- PointArrayContainer m_ThreadPointArray;
-
- DescriptorsFunctionPointerType m_DescriptorsFunction;
-
- unsigned int m_NeighborhoodRadius;
- std::string m_ClassKey;
- LabelType m_NoClassLabel;
- DescriptorType m_Shifts;
- DescriptorType m_Scales;
- DescriptorType m_InvertedScales;
-
- /** Step of the detection grid */
- unsigned int m_GridStep;
-
- /** classification model */
- ModelPointerType m_Model;
-
-};
-
-
-/** \class ObjectDetectionClassifier
- * \brief This class detects object in an image, given a ML model and a local descriptors function
- *
- * Given an image (by SetInputImage()), a ML model (by SetModel) and an local descriptors ImageFunction
- * (set by SetDescriptorsFunction()), this class computes the local descriptors on a regular grid
- * over the image, and evaluates the class label of the corresponding sample.
- * It outputs a vector data with the points for which the descriptors are not classified as "negative",
- * the negative class label being given by SetNoClassLabel()
- *
- * This class is streaming capable and multithreaded
- *
- * \ingroup OTBObjectDetection
- */
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionPrecision = double, class TCoordRep = double>
-class ITK_EXPORT ObjectDetectionClassifier :
- public PersistentFilterStreamingDecorator<
- PersistentObjectDetectionClassifier< TInputImage,
- TOutputVectorData,
- TLabel,
- itk::FunctionBase< itk::Point<TCoordRep, 2>,
- typename DefaultDescriptorType<TFunctionPrecision>::Type> >
- >
-{
-public:
- /** Standard Self typedef */
- typedef ObjectDetectionClassifier Self;
- typedef PersistentFilterStreamingDecorator
- < PersistentObjectDetectionClassifier
- <TInputImage,
- TOutputVectorData,
- TLabel,
- itk::FunctionBase< itk::Point<TCoordRep, 2>,
- typename DefaultDescriptorType<TFunctionPrecision>::Type> >
- > Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(ObjectDetectionClassifier, PersistentFilterStreamingDecorator);
-
- typedef TInputImage InputImageType;
- typedef TOutputVectorData OutputVectorDataType;
- typedef TLabel LabelType;
- typedef TCoordRep CoordRepType;
- typedef TFunctionPrecision FunctionPrecision;
-
- /** The coordinates used when evaluating function */
- typedef itk::Point<TCoordRep, 2> PointType;
-
- /** The return value of the function */
- typedef typename DefaultDescriptorType<FunctionPrecision>::Type DescriptorType;
-
- /** The function evaluated on the input image at locations specified by the vector data */
- typedef itk::FunctionBase<PointType, DescriptorType> DescriptorsFunctionType;
- typedef typename DescriptorsFunctionType::Pointer DescriptorsFunctionPointerType;
-
- typedef typename Superclass::FilterType PersistentFilterType;
-
- typedef typename PersistentFilterType::ModelType ModelType;
- typedef typename PersistentFilterType::ModelPointerType ModelPointerType;
-
- /** Input image to extract feature */
- void SetInputImage(InputImageType* input)
- {
- this->GetFilter()->SetInput(input);
- }
-
- /** Sample locations as a VectorData of points. The label is in the ClassKey feature */
- OutputVectorDataType* GetOutputVectorData()
- {
- return this->GetFilter()->GetOutputVectorData();
- }
-
- void AddInput(itk::DataObject * dataObject) override
- {
- this->GetFilter()->AddInput(dataObject);
- }
-
- /** The function to evaluate */
- void SetDescriptorsFunction(DescriptorsFunctionType * input)
- {
- this->GetFilter()->SetDescriptorsFunction(input);
- }
-
- /** The function to evaluate */
- DescriptorsFunctionType * GetDescriptorsFunction()
- {
- return this->GetFilter()->GetDescriptorsFunction();
- }
-
- /** The function to evaluate */
- void SetModel(ModelType* model)
- {
- this->GetFilter()->SetModel(model);
- }
-
- /** The classification model */
- const ModelType* GetModel()
- {
- return this->GetFilter()->GetModel();
- }
-
- otbSetObjectMemberMacro(Filter, NeighborhoodRadius, unsigned int);
- otbGetObjectMemberMacro(Filter, NeighborhoodRadius, unsigned int);
-
- /** Set/Get the name of the field containing the class information */
- otbGetObjectMemberMacro(Filter, ClassKey, std::string);
- otbSetObjectMemberMacro(Filter, ClassKey, std::string);
-
- /** Set/Get the label of the negative samples */
- otbGetObjectMemberMacro(Filter, NoClassLabel, LabelType);
- otbSetObjectMemberMacro(Filter, NoClassLabel, LabelType);
-
- /** Set/Get the Shifts for this sample list */
- otbGetObjectMemberMacro(Filter, Shifts, DescriptorType);
- otbSetObjectMemberMacro(Filter, Shifts, DescriptorType);
-
- /** Set/Get the Scales for this sample list */
- otbGetObjectMemberMacro(Filter, Scales, DescriptorType);
- otbSetObjectMemberMacro(Filter, Scales, DescriptorType);
-
- /** Set/Get the grid step for detection */
- otbSetObjectMemberMacro(Filter, GridStep, unsigned int);
- otbGetObjectMemberMacro(Filter, GridStep, unsigned int);
-
-
- protected:
- /** Constructor */
- ObjectDetectionClassifier();
-
- /** Destructor */
- ~ObjectDetectionClassifier() override;
-
- private:
- ObjectDetectionClassifier(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbObjectDetectionClassifier.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.hxx b/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.hxx
deleted file mode 100644
index 97781629e68ef470e1f35b8aeac6ccb1d273f1dd..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbObjectDetectionClassifier.hxx
+++ /dev/null
@@ -1,314 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbObjectDetectionClassifier_hxx
-#define otbObjectDetectionClassifier_hxx
-
-#include "otbObjectDetectionClassifier.h"
-
-#include "itkContinuousIndex.h"
-
-namespace otb
-{
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::PersistentObjectDetectionClassifier()
- : m_NeighborhoodRadius(0),
- m_ClassKey("Class"),
- m_NoClassLabel(0),
- m_GridStep(10)
-{
- this->SetNumberOfRequiredInputs(1);
-
- // Have 2 outputs : the image created by Superclass, a vector data with points
- this->SetNumberOfRequiredOutputs(3);
- this->itk::ProcessObject::SetNthOutput(1, this->MakeOutput(1).GetPointer());
- this->itk::ProcessObject::SetNthOutput(2, this->MakeOutput(2).GetPointer());
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::~PersistentObjectDetectionClassifier()
-{
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::AllocateOutputs()
-{
- // This is commented to prevent the streaming of the whole image for the first stream strip
- // It shall not cause any problem because the output image of this filter is not intended to be used.
- //InputImagePointer image = const_cast< TInputImage * >( this->GetInput() );
- //this->GraftOutput( image );
- // Nothing that needs to be allocated for the remaining outputs
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::GenerateOutputInformation()
-{
- Superclass::GenerateOutputInformation();
- if (this->GetInput())
- {
- this->GetOutput()->CopyInformation(this->GetInput());
- this->GetOutput()->SetLargestPossibleRegion(this->GetInput()->GetLargestPossibleRegion());
-
- if (this->GetOutput()->GetRequestedRegion().GetNumberOfPixels() == 0)
- {
- this->GetOutput()->SetRequestedRegion(this->GetOutput()->GetLargestPossibleRegion());
- }
- }
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::SetModel(ModelType* model)
-{
- if (model != m_Model)
- {
- m_Model = model;
- this->Modified();
- }
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-const typename PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>::ModelType*
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::GetModel(void) const
-{
- return m_Model;
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-typename PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>::VectorDataType*
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::GetOutputVectorData()
-{
- return static_cast<VectorDataType*>(this->itk::ProcessObject::GetOutput(1));
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-itk::DataObject::Pointer
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::MakeOutput(DataObjectPointerArraySizeType idx)
-{
- itk::DataObject::Pointer output;
- switch (idx)
- {
- case 0:
- output = static_cast<itk::DataObject*>(InputImageType::New().GetPointer());
- break;
- case 1:
- {
- output = static_cast<itk::DataObject*>(VectorDataType::New().GetPointer());
- break;
- }
- default:
- output = static_cast<itk::DataObject*>(InputImageType::New().GetPointer());
- break;
- }
- return output;
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::Reset()
-{
- m_ThreadPointArray = PointArrayContainer(this->GetNumberOfThreads());
-
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::Synthetize()
-{
- // merge all points in a single vector data
- //std::copy(m_ThreadPointArray[0].begin(), m_ThreadPointArray[0].end(),
- //std::ostream_iterator<DescriptorsFunctionPointType>(std::cout, "\n") );
-
- VectorDataType* vdata = this->GetOutputVectorData();
-
- // Retrieving root node
- VectorDataNodePointerType root = vdata->GetDataTree()->GetRoot()->Get();
- // Create the document node
- VectorDataNodePointerType document = VectorDataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- VectorDataNodePointerType folder = VectorDataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- vdata->GetDataTree()->Add(document, root);
- vdata->GetDataTree()->Add(folder, document);
-
- for (itk::ThreadIdType threadId = 0; threadId < m_ThreadPointArray.size(); ++threadId)
- {
- PointArray& pointArray = m_ThreadPointArray[threadId];
- typename PointArray::const_iterator it = pointArray.begin();
- typename PointArray::const_iterator end = pointArray.end();
-
- for (; it != end; ++it)
- {
- VectorDataNodePointerType currentGeometry = VectorDataNodeType::New();
- currentGeometry->SetNodeId("FEATURE_POINT");
- currentGeometry->SetNodeType(otb::FEATURE_POINT);
- VectorDataPointType p;
- p[0] = it->first[0];
- p[1] = it->first[1];
- currentGeometry->SetPoint(p);
- currentGeometry->SetFieldAsInt(m_ClassKey, it->second);
- vdata->GetDataTree()->Add(currentGeometry, folder);
- }
- }
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::GenerateInputRequestedRegion()
-{
- Superclass::GenerateInputRequestedRegion();
-
- // get pointers to the input and output
- typename Superclass::InputImagePointer inputPtr =
- const_cast< TInputImage * >( this->GetInput() );
- typename Superclass::OutputImagePointer outputPtr = this->GetOutput();
-
- if ( !inputPtr || !outputPtr )
- {
- return;
- }
-
- // get a copy of the input requested region (should equal the output
- // requested region)
- typename TInputImage::RegionType inputRequestedRegion;
- inputRequestedRegion = inputPtr->GetRequestedRegion();
-
- // pad the input requested region by the operator radius
- inputRequestedRegion.PadByRadius( m_NeighborhoodRadius + 1 );
-
- // crop the input requested region at the input's largest possible region
- if ( inputRequestedRegion.Crop(inputPtr->GetLargestPossibleRegion()) )
- {
- inputPtr->SetRequestedRegion( inputRequestedRegion );
- return;
- }
- else
- {
- // Couldn't crop the region (requested region is outside the largest
- // possible region). Throw an exception.
-
- // store what we tried to request (prior to trying to crop)
- inputPtr->SetRequestedRegion( inputRequestedRegion );
- }
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::BeforeThreadedGenerateData()
-{
- // Compute the 1/(sigma) vector
- m_InvertedScales = m_Scales;
- for(unsigned int idx = 0; idx < m_Scales.Size(); ++idx)
- {
- if(m_Scales[idx]-1e-10 < 0.)
- m_InvertedScales[idx] = 0.;
- else
- m_InvertedScales[idx] = 1 / m_Scales[idx];
- }
-
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionType>
-void
-PersistentObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionType>
-::ThreadedGenerateData(const RegionType& outputRegionForThread,
- itk::ThreadIdType threadId)
-{
- InputImageType* input = static_cast<InputImageType*>(this->itk::ProcessObject::GetInput(0));
- const ModelType* model = this->GetModel();
-
- IndexType begin = outputRegionForThread.GetIndex();
- IndexType end = begin;
- end[0] += outputRegionForThread.GetSize(0);
- end[1] += outputRegionForThread.GetSize(1);
-
- IndexType current = begin;
- for (; current[1] != end[1]; current[1]++)
- {
- if (current[1] % m_GridStep == 0)
- {
- for(current[0] = begin[0]; current[0] != end[0]; current[0]++)
- {
- if (current[0] % m_GridStep == 0)
- {
- DescriptorsFunctionPointType point;
- input->TransformIndexToPhysicalPoint(current, point);
-
- DescriptorType descriptor = m_DescriptorsFunction->Evaluate(point);
- ModelMeasurementType modelMeasurement(descriptor.GetSize());
- for (unsigned int i = 0; i < descriptor.GetSize(); ++i)
- {
- modelMeasurement[i] = (descriptor[i] - m_Shifts[i]) * m_InvertedScales[i];
- }
- LabelType label = (model->Predict(modelMeasurement))[0];
-
- if (label != m_NoClassLabel)
- {
- m_ThreadPointArray[threadId].push_back(std::make_pair(point, label));
- }
- }
- }
- }
- }
-}
-
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionPrecision, class TCoordRep>
-ObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionPrecision, TCoordRep>
-::ObjectDetectionClassifier()
-{
-
-}
-
-template <class TInputImage, class TOutputVectorData, class TLabel, class TFunctionPrecision, class TCoordRep>
-ObjectDetectionClassifier<TInputImage, TOutputVectorData, TLabel, TFunctionPrecision, TCoordRep>
-::~ObjectDetectionClassifier()
-{
-
-}
-
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.h b/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.h
deleted file mode 100644
index a40dfbed7341939bc664d29410bebf526de9d640..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.h
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRadiometricMomentsIFFactory_h
-#define otbRadiometricMomentsIFFactory_h
-
-#include "itkLightObject.h"
-
-#include "otbMetaImageFunction.h"
-#include "itkDataObject.h"
-#include "otbImage.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbRadiometricMomentsImageFunction.h"
-
-
-namespace otb
-{
-/** \class RadiometricMomentsIFFactory
- * \brief add a RadiometricMoments image function to a
- * MetaImageFunction
- *
- * This class aims at adding an adapted
- * RadiometricMomentsImageFunction to an existing MetaImageFunction
- * through the method Create.
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TImageType, class TCoordRep = double, class TPrecision = double>
-class ITK_EXPORT RadiometricMomentsIFFactory :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef RadiometricMomentsIFFactory Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(RadiometricMomentsIFFactory, itk::LightObject);
-
- // Input and output typedef
- typedef TImageType InputImageType;
- typedef TCoordRep CoordRepType;
- typedef TPrecision PrecisionType;
-
- // Other typedef
- typedef typename MetaImageFunction<TPrecision>::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<PrecisionType> ParamContainerType;
- typedef RadiometricMomentsImageFunction<InputImageType, CoordRepType>
- RadiometricMomentsIF;
- typedef ImageFunctionAdaptor<RadiometricMomentsIF, TPrecision>
- AdaptedRadiometricMomentsIF;
-
- void Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container);
-
-protected:
- RadiometricMomentsIFFactory(){}
- ~RadiometricMomentsIFFactory() override{}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- RadiometricMomentsIFFactory(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRadiometricMomentsIFFactory.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.hxx b/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.hxx
deleted file mode 100644
index 18f0bc730a5b998d856e8052d63a289075c1e2d9..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbRadiometricMomentsIFFactory.hxx
+++ /dev/null
@@ -1,55 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRadiometricMomentsIFFactory_hxx
-#define otbRadiometricMomentsIFFactory_hxx
-
-#include "otbRadiometricMomentsIFFactory.h"
-
-
-namespace otb
-{
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-RadiometricMomentsIFFactory<TImageType, TCoordRep, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TImageType, class TCoordRep, class TPrecision>
-void
-RadiometricMomentsIFFactory<TImageType, TCoordRep, TPrecision>
-::Create(InputImageType * image,
- ParamContainerType param,
- MetaImageFunctionPointerType metaIF,
- DataObjectContainerType * container)
-{
- typename AdaptedRadiometricMomentsIF::Pointer function = AdaptedRadiometricMomentsIF::New();
-
- function->SetInputImage(image);
- function->GetInternalImageFunction()->SetNeighborhoodRadius(param[0]);
-
- metaIF->AddFunction(function);
- container->push_back(image);
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.h b/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.h
deleted file mode 100644
index 4ff7757898791d4a8a4324f3ecbce7f1429868d4..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.h
+++ /dev/null
@@ -1,196 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbStandardMetaImageFunctionBuilder_h
-#define otbStandardMetaImageFunctionBuilder_h
-
-
-#include "itkVariableLengthVector.h"
-
-#include "otbMultiChannelIFFactory.h"
-
-#include "otbLocalHistogramIFFactory.h"
-#include "otbFlusserMomentsIFFactory.h"
-#include "otbRadiometricMomentsIFFactory.h"
-#include "otbFourierMellinDescriptorsIFFactory.h"
-#include "otbHaralickTexturesIFFactory.h"
-
-
-namespace otb
-{
-/** \class StandardMetaImageFunctionBuilder
- * \brief Build a Standard MetaImageFunction
- *
- * The StandardMetaImageFunctionBuilder class allows calling multiple
- * ImageFunctions:
- * - otbRadiometricMomentsImageFunction
- * - otbFlusserMomentsImageFunction
- * - otbFourierMellinDescriptorsImageFunction
- * - otbLocalHistogramImageFunction
- * On Multiple Images (and VectorImages Processed as ImageList).
- *
- * Each ImageFunction can be parametrized. The only thing to do to
- * complete the MetaImageFunction is to AddImages.
- *
- *
- *
- *
- * \ingroup OTBObjectDetection
- */
-
-template <class TPrecision = double, class TCoordRep = double>
-class ITK_EXPORT StandardMetaImageFunctionBuilder :
- public itk::LightObject
-{
-public:
- /** Standard class typedefs. */
- typedef StandardMetaImageFunctionBuilder Self;
- typedef itk::LightObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- // New macro
- itkNewMacro(Self);
-
- // RTTI typeinfo
- itkTypeMacro(StandardMetaImageFunctionBuilder, itk::LightObject);
-
- // Input and output typedef
- typedef TPrecision ValueType;
- typedef TCoordRep CoordRepType;
-
- // Other typedef
- typedef MetaImageFunction<TPrecision, CoordRepType> MetaImageFunctionType;
- typedef typename MetaImageFunctionType::Pointer MetaImageFunctionPointerType;
- typedef typename std::vector<itk::DataObject::Pointer> DataObjectContainerType;
- typedef typename std::vector<ValueType> ParamContainerType;
-
- //Accessors
- unsigned int GetNeighborhoodRadius();
- void SetNeighborhoodRadius(unsigned int radius);
-
- ParamContainerType GetFlusserMomentsIFParameters();
- void SetFlusserMomentsIFParameters(ParamContainerType Param);
-
- ParamContainerType GetLocalHistogramIFParameters();
- void SetLocalHistogramIFParameters(ParamContainerType Param);
-
- ParamContainerType GetRadiometricMomentsIFParameters();
- void SetRadiometricMomentsIFParameters(ParamContainerType Param);
-
- ParamContainerType GetFourierMellinDescriptorsIFParameters();
- void SetFourierMellinDescriptorsIFParameters(ParamContainerType Param);
-
- ParamContainerType GetHaralickTexturesIFParameters();
- void SetHaralickTexturesIFParameters(ParamContainerType Param);
-
- MetaImageFunctionPointerType GetMetaImageFunction();
- DataObjectContainerType GetDataObjectContainer();
-
- // Adding Image
- template <class TInputImage>
- void AddImage(TInputImage * image)
- {
- typedef TInputImage InputImageType;
- typedef typename InputImageType::InternalPixelType InternalPixelType;
- typedef Image<InternalPixelType, 2> ImageType;
-
- //Mono-Channel Factories
- typedef LocalHistogramIFFactory<ImageType,
- CoordRepType, TPrecision> LocalHistogramIFFactoryType;
- typedef FlusserMomentsIFFactory<ImageType,
- CoordRepType, TPrecision> FlusserMomentsIFFactoryType;
- typedef RadiometricMomentsIFFactory<ImageType,
- CoordRepType, TPrecision> RadiometricMomentsIFFactoryType;
- typedef FourierMellinDescriptorsIFFactory<ImageType,
- CoordRepType, TPrecision> FourierMellinDescriptorsIFFactoryType;
- typedef HaralickTexturesIFFactory<ImageType,
- CoordRepType, TPrecision> HaralickTexturesIFFactoryType;
-
- //Multi-Channel Factories
- typedef MultiChannelIFFactory<LocalHistogramIFFactoryType, InputImageType>
- MCLocalHistogramIFFactoryType;
- typedef MultiChannelIFFactory<FlusserMomentsIFFactoryType, InputImageType>
- MCFlusserMomentsIFFactoryType;
- typedef MultiChannelIFFactory<RadiometricMomentsIFFactoryType, InputImageType>
- MCRadiometricMomentsIFFactoryType;
- typedef MultiChannelIFFactory<FourierMellinDescriptorsIFFactoryType, InputImageType>
- MCFourierMellinDescriptorsIFFactoryType;
- typedef MultiChannelIFFactory<HaralickTexturesIFFactoryType, InputImageType>
- MCHaralickTexturesIFFactoryType;
-
- MCLocalHistogramIFFactoryType MCLocalHistogramIFFactory;
- MCFlusserMomentsIFFactoryType MCFlusserMomentsIFFactory;
- MCRadiometricMomentsIFFactoryType MCRadiometricMomentsIFFactory;
- MCFourierMellinDescriptorsIFFactoryType MCFourierMellinDescriptorsIFFactory;
- MCHaralickTexturesIFFactoryType MCHaralickTexturesIFFactory;
-
-
- MCRadiometricMomentsIFFactory.Create(image,
- this->GetRadiometricMomentsIFParameters(),
- m_MetaImageFunction,
- &m_DataObjectContainer);
- MCFlusserMomentsIFFactory.Create(image,
- this->GetFlusserMomentsIFParameters(),
- m_MetaImageFunction,
- &m_DataObjectContainer);
-
- MCFourierMellinDescriptorsIFFactory.Create(image,
- this->GetFourierMellinDescriptorsIFParameters(),
- m_MetaImageFunction,
- &m_DataObjectContainer);
-
- //MCLocalHistogramIFFactory.Create(image,
- // m_LocalHistogramParam,
- // m_MetaImageFunction,
- // &m_DataObjectContainer);
-
- //MCHaralickTexturesIFFactory.Create(image,
- // m_HaralickTexturesParam,
- // m_MetaImageFunction,
- // &m_DataObjectContainer);
- }
-
-protected:
- StandardMetaImageFunctionBuilder();
- ~StandardMetaImageFunctionBuilder() override;
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- StandardMetaImageFunctionBuilder(const Self& ) = delete;
- void operator=(const Self& ) = delete;
-
- MetaImageFunctionPointerType m_MetaImageFunction;
- DataObjectContainerType m_DataObjectContainer;
- unsigned int m_NeighborhoodRadius;
- ParamContainerType m_FlusserMomentsParam; //[NeighborhoodRadius]
- ParamContainerType m_RadiometricMomentsParam; //[NeighborhoodRadius]
- ParamContainerType m_LocalHistogramParam; //[NeighborhoodRadius; nbBins; minHistogram; maxHistogram]
- ParamContainerType m_FourierMellinDescriptorsParam; //[NeighborhoodRadius; PMax; QMax]
- ParamContainerType m_HaralickTexturesParam; //[NeighborhoodRadius; ImageMin; ImageMax; NbBinPerAxis; Offset]
-
-};
-
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbStandardMetaImageFunctionBuilder.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.hxx b/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.hxx
deleted file mode 100644
index 27313af0c10e0cc27a1b56e0915ba747c374a79f..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/include/otbStandardMetaImageFunctionBuilder.hxx
+++ /dev/null
@@ -1,219 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbStandardMetaImageFunctionBuilder_hxx
-#define otbStandardMetaImageFunctionBuilder_hxx
-
-#include "otbStandardMetaImageFunctionBuilder.h"
-
-
-namespace otb
-{
-template <class TPrecision, class TCoordRep>
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::StandardMetaImageFunctionBuilder()
-{
- m_NeighborhoodRadius = 4;
-
- m_MetaImageFunction = MetaImageFunctionType::New();
-
- m_FlusserMomentsParam.push_back(static_cast<ValueType>(this->GetNeighborhoodRadius()));
-
- m_RadiometricMomentsParam.push_back(static_cast<ValueType>(this->GetNeighborhoodRadius()));
-
- m_LocalHistogramParam.push_back(static_cast<ValueType>(this->GetNeighborhoodRadius()));
- m_LocalHistogramParam.push_back(16);
- m_LocalHistogramParam.push_back(0);
- m_LocalHistogramParam.push_back(4096);
-
- m_FourierMellinDescriptorsParam.push_back(static_cast<ValueType>(this->GetNeighborhoodRadius()));
- m_FourierMellinDescriptorsParam.push_back(3);
- m_FourierMellinDescriptorsParam.push_back(3);
-
- m_HaralickTexturesParam.push_back(static_cast<ValueType>(this->GetNeighborhoodRadius()));
- m_HaralickTexturesParam.push_back(0);
- m_HaralickTexturesParam.push_back(4096);
- m_HaralickTexturesParam.push_back(30);
- m_HaralickTexturesParam.push_back(2);
-}
-
-template <class TPrecision, class TCoordRep>
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::~StandardMetaImageFunctionBuilder()
-{
-
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template <class TPrecision, class TCoordRep>
-unsigned int
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetNeighborhoodRadius()
-{
- return m_NeighborhoodRadius;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetNeighborhoodRadius(unsigned int radius)
-{
- if (radius>0)
- {
- m_NeighborhoodRadius = radius;
-
- m_FlusserMomentsParam[0] = static_cast<ValueType>(radius);
- m_RadiometricMomentsParam[0] = static_cast<ValueType>(radius);
- m_LocalHistogramParam[0] = static_cast<ValueType>(radius);
- m_FourierMellinDescriptorsParam[0] = static_cast<ValueType>(radius);
- m_HaralickTexturesParam[0] = static_cast<ValueType>(radius);
- }
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::ParamContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetFlusserMomentsIFParameters()
-{
- return m_FlusserMomentsParam;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetFlusserMomentsIFParameters(ParamContainerType Param)
-{
- if (Param.size()==1)
- {
- m_FlusserMomentsParam[0] = Param[0];
- }
-}
-
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::ParamContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetLocalHistogramIFParameters()
-{
- return m_LocalHistogramParam;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetLocalHistogramIFParameters(ParamContainerType Param)
-{
- if (Param.size()==4)
- {
- m_LocalHistogramParam[0] = Param[0];
- m_LocalHistogramParam[1] = Param[1];
- m_LocalHistogramParam[2] = Param[2];
- m_LocalHistogramParam[3] = Param[3];
- }
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::ParamContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetRadiometricMomentsIFParameters()
-{
- return m_RadiometricMomentsParam;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetRadiometricMomentsIFParameters(ParamContainerType Param)
-{
- if (Param.size()==1)
- {
- m_RadiometricMomentsParam[0] = Param[0];
- }
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::ParamContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetFourierMellinDescriptorsIFParameters()
-{
- return m_FourierMellinDescriptorsParam;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetFourierMellinDescriptorsIFParameters(ParamContainerType Param)
-{
- if (Param.size()==3)
- {
- m_FourierMellinDescriptorsParam[0] = Param[0];
- m_FourierMellinDescriptorsParam[1] = Param[1];
- m_FourierMellinDescriptorsParam[2] = Param[2];
- }
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::ParamContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetHaralickTexturesIFParameters()
-{
- return m_HaralickTexturesParam;
-}
-
-template <class TPrecision, class TCoordRep>
-void
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::SetHaralickTexturesIFParameters(ParamContainerType Param)
-{
- if (Param.size()==5)
- {
- m_HaralickTexturesParam[0] = Param[0];
- m_HaralickTexturesParam[1] = Param[1];
- m_HaralickTexturesParam[2] = Param[2];
- m_HaralickTexturesParam[3] = Param[3];
- m_HaralickTexturesParam[4] = Param[4];
- }
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::MetaImageFunctionPointerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetMetaImageFunction()
-{
- return m_MetaImageFunction;
-}
-
-template <class TPrecision, class TCoordRep>
-typename StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>::DataObjectContainerType
-StandardMetaImageFunctionBuilder<TPrecision, TCoordRep>
-::GetDataObjectContainer()
-{
- return m_DataObjectContainer;
-}
-
-}//end namespace
-#endif
diff --git a/Modules/Detection/ObjectDetection/otb-module.cmake b/Modules/Detection/ObjectDetection/otb-module.cmake
deleted file mode 100644
index 5033f185dab2dc5e272c9fa280517f193a8cacfe..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/otb-module.cmake
+++ /dev/null
@@ -1,46 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "This module contains useful classes for object detection.")
-
-otb_module(OTBObjectDetection
- DEPENDS
- OTBCommon
- OTBDescriptors
- OTBITK
- OTBImageBase
- OTBMoments
- OTBObjectList
- OTBStatistics
- OTBStreaming
- OTBSupervised
- OTBTextures
- OTBVectorDataBase
-
- TEST_DEPENDS
- OTBIOXML
- OTBImageIO
- OTBLibSVM
- OTBTestKernel
- OTBVectorDataIO
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Detection/ObjectDetection/test/CMakeLists.txt b/Modules/Detection/ObjectDetection/test/CMakeLists.txt
deleted file mode 100644
index 14989ab892c009f4f2ddbc0a61ac0d650ad74509..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/CMakeLists.txt
+++ /dev/null
@@ -1,117 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBObjectDetectionTests
-otbObjectDetectionTestDriver.cxx
-otbLabeledSampleLocalizationGenerator.cxx
-otbStandardMetaImageFunctionBuilder.cxx
-otbDescriptorsListSampleGenerator.cxx
-otbObjectDetectionClassifier.cxx
-)
-
-add_executable(otbObjectDetectionTestDriver ${OTBObjectDetectionTests})
-target_link_libraries(otbObjectDetectionTestDriver ${OTBObjectDetection-Test_LIBRARIES})
-otb_module_target_label(otbObjectDetectionTestDriver)
-
-# Tests Declaration
-
-
-otb_add_test(NAME odTvLabeledSampleLocalizationGenerator COMMAND otbObjectDetectionTestDriver
- --compare-ogr ${NOTOL}
- ${BASELINE_FILES}/TvLabeledSampleLocalizationGeneratorOutput.shp
- ${TEMP}/TvLabeledSampleLocalizationGeneratorOutput.shp
- otbLabeledSampleLocalizationGenerator
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01LabeledPoints.shp
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01Polygons.shp
- ${TEMP}/TvLabeledSampleLocalizationGeneratorOutput.shp
- )
-
-
-otb_add_test(NAME odTvStandardMetaImageFunctionBuilder COMMAND otbObjectDetectionTestDriver
- otbStandardMetaImageFunctionBuilder
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01.tif
- )
-
-otb_add_test(NAME odTvDescriptorsListSampleGeneratorStreaming COMMAND otbObjectDetectionTestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/TvDescriptorsListSampleGeneratorNoStreamingOutput.txt
- ${TEMP}/TvDescriptorsListSampleGeneratorStreamingOutput.txt
- otbDescriptorsListSampleGenerator
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01_amplitude.tif
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01Samples.shp
- ${TEMP}/TvDescriptorsListSampleGeneratorStreamingOutput.txt
- 50 # streaming
- 5 # neighborhood radius
- )
-
-#otb_add_test(NAME odTvDescriptorsSVMModelCreation COMMAND otbObjectDetectionTestDriver
- #--compare-ascii ${NOTOL}
- #${BASELINE_FILES}/TvDescriptorsSVMModelCreation.svm
- #${TEMP}/TvDescriptorsSVMModelCreation.svm
- #otbDescriptorsSVMModelCreation
- #${INPUTDATA}/ObjectReco/Boats/maur_B010202_01_amplitude.tif
- #${INPUTDATA}/ObjectReco/Boats/maur_B010202_01Samples.shp
- #${INPUTDATA}/ObjectReco/Boats/FeatureStats_RadiometricMoments_amplitude.xml
- #${TEMP}/TvDescriptorsSVMModelCreation.svm
- #0 # streaming
- #5 # neighborhood radius
- #)
-
-otb_add_test(NAME odTvDescriptorsListSampleGeneratorNoStreaming COMMAND otbObjectDetectionTestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/TvDescriptorsListSampleGeneratorNoStreamingOutput.txt
- ${TEMP}/TvDescriptorsListSampleGeneratorNoStreamingOutput.txt
- otbDescriptorsListSampleGenerator
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01_amplitude.tif
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01Samples.shp
- ${TEMP}/TvDescriptorsListSampleGeneratorNoStreamingOutput.txt
- 0 # streaming
- 5 # neighborhood radius
- )
-
-
-
-otb_add_test(NAME odTvObjectDetectionClassifierStreaming COMMAND otbObjectDetectionTestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/TvObjectDetectionClassifierOutput.txt
- ${TEMP}/TvObjectDetectionClassifierOutputStreaming.txt
- otbObjectDetectionClassifier
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01_extract_amplitude.tif
- ${INPUTDATA}/ObjectReco/Boats/FeatureStats_RadiometricMoments_amplitude.xml
- ${BASELINE_FILES}/TvDescriptorsSVMModelCreation.svm
- ${TEMP}/TvObjectDetectionClassifierOutputStreaming.txt
- 50 # streaming
- 5 # neighborhood radius
- )
-
-otb_add_test(NAME odTvObjectDetectionClassifier COMMAND otbObjectDetectionTestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/TvObjectDetectionClassifierOutput.txt
- ${TEMP}/TvObjectDetectionClassifierOutput.txt
- otbObjectDetectionClassifier
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01_extract_amplitude.tif
- ${INPUTDATA}/ObjectReco/Boats/FeatureStats_RadiometricMoments_amplitude.xml
- ${BASELINE_FILES}/TvDescriptorsSVMModelCreation.svm
- ${TEMP}/TvObjectDetectionClassifierOutput.txt
- 0 # streaming
- 5 # neighborhood radius
- )
diff --git a/Modules/Detection/ObjectDetection/test/otbDescriptorsListSampleGenerator.cxx b/Modules/Detection/ObjectDetection/test/otbDescriptorsListSampleGenerator.cxx
deleted file mode 100644
index ac0e7c21549ee6a301db2fddd7a745d51b00ce38..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/otbDescriptorsListSampleGenerator.cxx
+++ /dev/null
@@ -1,234 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-#include <iterator>
-
-#include "otbImage.h"
-#include "otbRadiometricMomentsImageFunction.h"
-#include "otbDescriptorsListSampleGenerator.h"
-#include "otbImageFileReader.h"
-#include "otbVectorDataFileReader.h"
-#include "otbImageFunctionAdaptor.h"
-
-#include "otbStatisticsXMLFileReader.h"
-#include "otbShiftScaleSampleListFilter.h"
-#include "otbLibSVMMachineLearningModel.h"
-
-const unsigned int Dimension = 2;
-typedef int LabelType;
-typedef double PixelType;
-typedef double FunctionPrecisionType;
-typedef double CoordRepType;
-
-typedef otb::Image<PixelType, Dimension> ImageType;
-typedef otb::VectorData<> VectorDataType;
-typedef otb::RadiometricMomentsImageFunction<ImageType, CoordRepType> FunctionType;
-typedef otb::ImageFunctionAdaptor<FunctionType, FunctionPrecisionType> AdaptedFunctionType;
-
-typedef itk::VariableLengthVector<FunctionPrecisionType> SampleType;
-typedef itk::Statistics::ListSample<SampleType> ListSampleType;
-typedef itk::FixedArray<LabelType, 1> LabelSampleType;
-typedef itk::Statistics::ListSample<LabelSampleType> LabelListSampleType;
-
-typedef otb::DescriptorsListSampleGenerator
- < ImageType,
- VectorDataType,
- ListSampleType,
- LabelType,
- FunctionPrecisionType,
- CoordRepType > DescriptorsListSampleGeneratorType;
-
-typedef otb::ImageFileReader<ImageType> ImageReaderType;
-typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
-
-typedef otb::StatisticsXMLFileReader<SampleType> StatisticsReader;
-typedef otb::Statistics::ShiftScaleSampleListFilter<ListSampleType> ShiftScaleListSampleFilterType;
-
-typedef otb::LibSVMMachineLearningModel<FunctionPrecisionType, LabelType> SVMType;
-
-typedef FunctionType::PointType PointType;
-typedef DescriptorsListSampleGeneratorType::SamplesPositionType SamplesPositionType;
-
-struct SampleEntry
-{
- PointType position;
- LabelType label;
- SampleType measurement;
-};
-
-struct CompareSampleEntry
-{
- bool operator () (SampleEntry p, SampleEntry q)
- {
- // order with the y axis position
- if (p.position[1] < q.position[1])
- return true;
- if (p.position[1] > q.position[1])
- return false;
-
- // If one the same line,
- // order with the x axis position
- if (p.position[0] < q.position[0])
- return true;
-
- return false;
- }
-};
-
-std::ostream &operator<<(std::ostream &stream, SampleEntry entry)
-{
- stream << "---" << std::endl
- << "Label : " << entry.label << std::endl
- << "Position : " << entry.position << std::endl
- << "Measurements : " << entry.measurement;
- return stream;
-}
-
-
-int otbDescriptorsListSampleGenerator(int argc, char* argv[])
-{
- if (argc != 6)
- {
- std::cerr << "Wrong number of arguments" << std::endl;
- return EXIT_FAILURE;
- }
-
- const char* inputImageFileName = argv[1];
- const char* inputSamplesLocation = argv[2];
- const char* outputFileName = argv[3];
- int streaming = atoi(argv[4]);
- int neighborhood = atoi(argv[5]);
-
- ImageReaderType::Pointer imageReader = ImageReaderType::New();
- imageReader->SetFileName(inputImageFileName);
-
- VectorDataReaderType::Pointer vectorDataReader = VectorDataReaderType::New();
- vectorDataReader->SetFileName(inputSamplesLocation);
-
- //imageReader->Update();
- //vectorDataReader->Update();
-
- AdaptedFunctionType::Pointer descriptorsFunction = AdaptedFunctionType::New();
- descriptorsFunction->SetInputImage(imageReader->GetOutput());
- descriptorsFunction->GetInternalImageFunction()->SetNeighborhoodRadius(5);
-
- DescriptorsListSampleGeneratorType::Pointer descriptorsGenerator = DescriptorsListSampleGeneratorType::New();
- descriptorsGenerator->SetInputImage(imageReader->GetOutput());
- descriptorsGenerator->SetSamplesLocations(vectorDataReader->GetOutput());
- descriptorsGenerator->SetDescriptorsFunction(descriptorsFunction.GetPointer());
- descriptorsGenerator->SetNeighborhoodRadius(neighborhood);
- descriptorsGenerator->GetStreamer()->SetNumberOfLinesStrippedStreaming( streaming );
- descriptorsGenerator->Update();
-
- ListSampleType::Pointer samples = descriptorsGenerator->GetListSample();
- LabelListSampleType::Pointer labels = descriptorsGenerator->GetLabelListSample();
- SamplesPositionType& positions = descriptorsGenerator->GetSamplesPositions();
-
- ListSampleType::Iterator sampleIt = samples->Begin();
- LabelListSampleType::Iterator labelIt = labels->Begin();
- SamplesPositionType::const_iterator posIt = positions.begin();
-
- ListSampleType::Iterator sampleEnd = samples->End();
- LabelListSampleType::Iterator labelEnd = labels->End();
- SamplesPositionType::const_iterator posEnd = positions.end();
-
- std::vector<SampleEntry> entries;
-
- while (sampleIt != sampleEnd && labelIt != labelEnd && posIt != posEnd)
- {
- SampleEntry entry;
- entry.position = *posIt;
- entry.label = labelIt.GetMeasurementVector()[0];
- entry.measurement = sampleIt.GetMeasurementVector();
-
- entries.push_back(entry);
-
- ++sampleIt;
- ++labelIt;
- ++posIt;
- }
-
- std::sort(entries.begin(), entries.end(), CompareSampleEntry());
- std::ofstream file(outputFileName);
- std::copy(entries.begin(), entries.end(), std::ostream_iterator<SampleEntry>(file, "\n"));
- file.close();
-
- return EXIT_SUCCESS;
-}
-
-
-
-int otbDescriptorsSVMModelCreation(int argc, char* argv[])
-{
- if (argc != 7)
- {
- std::cerr << "Wrong number of arguments" << std::endl;
- return EXIT_FAILURE;
- }
-
- const char* inputImageFileName = argv[1];
- const char* inputSamplesLocation = argv[2];
- const char* featureStatisticsFileName = argv[3];
- const char* outputFileName = argv[4];
- int streaming = atoi(argv[5]);
- int neighborhood = atoi(argv[6]);
-
- ImageReaderType::Pointer imageReader = ImageReaderType::New();
- imageReader->SetFileName(inputImageFileName);
-
- VectorDataReaderType::Pointer vectorDataReader = VectorDataReaderType::New();
- vectorDataReader->SetFileName(inputSamplesLocation);
-
- //imageReader->Update();
- //vectorDataReader->Update();
-
- AdaptedFunctionType::Pointer descriptorsFunction = AdaptedFunctionType::New();
- descriptorsFunction->SetInputImage(imageReader->GetOutput());
- descriptorsFunction->GetInternalImageFunction()->SetNeighborhoodRadius(neighborhood);
-
- DescriptorsListSampleGeneratorType::Pointer descriptorsGenerator = DescriptorsListSampleGeneratorType::New();
- descriptorsGenerator->SetInputImage(imageReader->GetOutput());
- descriptorsGenerator->SetSamplesLocations(vectorDataReader->GetOutput());
- descriptorsGenerator->SetDescriptorsFunction(descriptorsFunction.GetPointer());
- descriptorsGenerator->SetNeighborhoodRadius(5);
- descriptorsGenerator->GetStreamer()->SetNumberOfLinesStrippedStreaming( streaming );
- descriptorsGenerator->Update();
-
- // Normalize the samples
- // Read the mean and variance form the XML file
- StatisticsReader::Pointer statisticsReader = StatisticsReader::New();
- statisticsReader->SetFileName(featureStatisticsFileName);
- SampleType meanMeasurentVector = statisticsReader->GetStatisticVectorByName("mean");
- SampleType varianceMeasurentVector = statisticsReader->GetStatisticVectorByName("stddev");
-
- // Shift scale the samples
- ShiftScaleListSampleFilterType::Pointer shiftscaleFilter = ShiftScaleListSampleFilterType::New();
- shiftscaleFilter->SetInput(descriptorsGenerator->GetListSample());
- shiftscaleFilter->SetShifts(meanMeasurentVector);
- shiftscaleFilter->SetScales(varianceMeasurentVector);
- shiftscaleFilter->Update();
-
- SVMType::Pointer svmEstimator = SVMType::New();
- svmEstimator->SetInputListSample(shiftscaleFilter->GetOutput());
- svmEstimator->SetTargetListSample(descriptorsGenerator->GetLabelListSample());
- svmEstimator->Train();
- svmEstimator->Save(outputFileName);
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/ObjectDetection/test/otbLabeledSampleLocalizationGenerator.cxx b/Modules/Detection/ObjectDetection/test/otbLabeledSampleLocalizationGenerator.cxx
deleted file mode 100644
index 5497da01d457c7889ac52c691c5e59cdd535201f..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/otbLabeledSampleLocalizationGenerator.cxx
+++ /dev/null
@@ -1,69 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataFileWriter.h"
-#include "otbLabeledSampleLocalizationGenerator.h"
-
-
-int otbLabeledSampleLocalizationGenerator(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD1 = argv[1];
- const char * inputVD2 = argv[2];
- const char * outputVD = argv[3];
-
- typedef otb::VectorData<> VectorDataType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef otb::LabeledSampleLocalizationGenerator<VectorDataType> GeneratorType;
-
- // instantiation
- VectorDataReaderType::Pointer reader1 = VectorDataReaderType::New();
- VectorDataReaderType::Pointer reader2 = VectorDataReaderType::New();
- VectorDataWriterType::Pointer writer = VectorDataWriterType::New();
- GeneratorType::Pointer generator = GeneratorType::New();
-
- reader1->SetFileName(inputVD1);
- //reader1->Update();
-
- reader2->SetFileName(inputVD2);
- //reader2->Update();
-
- generator->PushBackInput(reader1->GetOutput());
- generator->PushBackInput(reader2->GetOutput());
-
- generator->SetSeed(0); // enable reproducible random number sequence
- generator->SetClassKey("Class");
- generator->SetNoClassIdentifier(0);
- generator->SetInhibitionRadius(5);
- generator->SetRandomLocalizationDensity(0.004);
- generator->SetNbMaxIteration(1000);
- generator->SetNumberOfPositiveSamplesPerPoint(2);
-
- //generator->Update();
-
- writer->SetFileName(outputVD);
- writer->SetInput(generator->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/ObjectDetection/test/otbObjectDetectionClassifier.cxx b/Modules/Detection/ObjectDetection/test/otbObjectDetectionClassifier.cxx
deleted file mode 100644
index ee37856db93074bef43637baea584286c4b2959a..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/otbObjectDetectionClassifier.cxx
+++ /dev/null
@@ -1,156 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include <iostream>
-#include <iterator>
-
-#include "otbImage.h"
-#include "otbRadiometricMomentsImageFunction.h"
-#include "itkListSample.h"
-#include "itkVariableLengthVector.h"
-#include "otbObjectDetectionClassifier.h"
-#include "otbImageFileReader.h"
-#include "otbImageFunctionAdaptor.h"
-#include "otbStatisticsXMLFileReader.h"
-#include "itkPreOrderTreeIterator.h"
-#include "otbLibSVMMachineLearningModel.h"
-
-const unsigned int Dimension = 2;
-typedef int LabelType;
-typedef double PixelType;
-typedef double FunctionPrecisionType;
-typedef double CoordRepType;
-
-typedef otb::Image<PixelType, Dimension> ImageType;
-typedef otb::VectorData<> VectorDataType;
-typedef VectorDataType::PointType PointType;
-typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType> TreeIteratorType;
-
-typedef otb::ObjectDetectionClassifier
- < ImageType,
- VectorDataType,
- LabelType,
- FunctionPrecisionType,
- CoordRepType > ObjectDetectionClassifierType;
-
-typedef otb::RadiometricMomentsImageFunction<ImageType, CoordRepType> FunctionType;
-typedef otb::ImageFunctionAdaptor<FunctionType, FunctionPrecisionType> AdaptedFunctionType;
-
-typedef otb::ImageFileReader<ImageType> ImageReaderType;
-
-typedef otb::LibSVMMachineLearningModel<PixelType,LabelType> SVMModelType;
-typedef SVMModelType::Pointer SVMModelPointerType;
-
-typedef otb::StatisticsXMLFileReader<AdaptedFunctionType::OutputType> StatisticsXMLFileReaderType;
-
-
-struct ComparePoint
-{
- bool operator () (PointType p, PointType q)
- {
- // order with the y axis position
- if (p[1] < q[1])
- return true;
- if (p[1] > q[1])
- return false;
-
- // If one the same line,
- // order with the x axis position
- if (p[0] < q[0])
- return true;
-
- return false;
- }
-};
-
-std::ostream &operator<<(std::ostream &stream, PointType p)
-{
- stream << p[0] << " " << p[1];
- return stream;
-}
-
-
-
-int otbObjectDetectionClassifier(int argc, char* argv[])
-{
- if (argc != 7)
- {
- std::cerr << "Wrong number of arguments" << std::endl;
- return EXIT_FAILURE;
- }
-
- const char* inputImageFileName = argv[1];
- const char* inputFeatureStats = argv[2];
- const char* inputSVMModel = argv[3];
- const char* outputVectorDataFileName = argv[4];
- int streaming = atoi(argv[5]);
- int neighborhood = atoi(argv[6]);
-
- ImageReaderType::Pointer imageReader = ImageReaderType::New();
- imageReader->SetFileName(inputImageFileName);
-
- StatisticsXMLFileReaderType::Pointer statisticsReader = StatisticsXMLFileReaderType::New();
- statisticsReader->SetFileName(inputFeatureStats);
-
-
- SVMModelPointerType svmModel = SVMModelType::New();
- svmModel->Load(inputSVMModel);
-
- AdaptedFunctionType::Pointer descriptorsFunction = AdaptedFunctionType::New();
- descriptorsFunction->SetInputImage(imageReader->GetOutput());
- descriptorsFunction->GetInternalImageFunction()->SetNeighborhoodRadius(neighborhood);
-
- ObjectDetectionClassifierType::Pointer classifier = ObjectDetectionClassifierType::New();
- classifier->SetInputImage(imageReader->GetOutput());
- classifier->SetNeighborhoodRadius(neighborhood);
- classifier->SetModel(svmModel);
- classifier->SetDescriptorsFunction(descriptorsFunction);
- classifier->SetNoClassLabel(0);
- classifier->SetClassKey("Class");
- classifier->SetShifts(statisticsReader->GetStatisticVectorByName("mean"));
- classifier->SetScales(statisticsReader->GetStatisticVectorByName("stddev"));
- classifier->GetStreamer()->SetNumberOfLinesStrippedStreaming( streaming );
- classifier->SetGridStep(neighborhood/2);
- classifier->Update();
-
- std::vector<ObjectDetectionClassifierType::PointType> points;
- VectorDataType::Pointer vectorData = classifier->GetOutputVectorData();
-
- TreeIteratorType itVector(vectorData->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPointFeature())
- {
- points.push_back(itVector.Get()->GetPoint());
- }
- ++itVector;
- }
-
- std::sort(points.begin(), points.end(), ComparePoint());
- std::ofstream file(outputVectorDataFileName);
- std::copy(points.begin(), points.end(), std::ostream_iterator<PointType>(file, "\n"));
- file.close();
-
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/ObjectDetection/test/otbObjectDetectionTestDriver.cxx b/Modules/Detection/ObjectDetection/test/otbObjectDetectionTestDriver.cxx
deleted file mode 100644
index 3d7686897dff2f713650bcf46755b97571e1b22a..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/otbObjectDetectionTestDriver.cxx
+++ /dev/null
@@ -1,30 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbLabeledSampleLocalizationGenerator);
- REGISTER_TEST(otbStandardMetaImageFunctionBuilder);
- REGISTER_TEST(otbDescriptorsListSampleGenerator);
- REGISTER_TEST(otbDescriptorsSVMModelCreation);
- REGISTER_TEST(otbObjectDetectionClassifier);
-}
diff --git a/Modules/Detection/ObjectDetection/test/otbStandardMetaImageFunctionBuilder.cxx b/Modules/Detection/ObjectDetection/test/otbStandardMetaImageFunctionBuilder.cxx
deleted file mode 100644
index 5ac5d938059ae6671036b2e206ca820c3d17ebf2..0000000000000000000000000000000000000000
--- a/Modules/Detection/ObjectDetection/test/otbStandardMetaImageFunctionBuilder.cxx
+++ /dev/null
@@ -1,137 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbStandardMetaImageFunctionBuilder.h"
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-
-#include "otbImageFunctionAdaptor.h"
-#include "otbFlusserMomentsImageFunction.h"
-#include "otbRadiometricMomentsImageFunction.h"
-#include "otbFourierMellinDescriptorsImageFunction.h"
-#include "otbLocalHistogramImageFunction.h"
-#include "otbHaralickTexturesImageFunction.h"
-
-
-
-int otbStandardMetaImageFunctionBuilder(int itkNotUsed(argc), char* argv[])
-{
- const char * inputFilename = argv[1];
-
- std::vector<double> p1, p2, p3, p4, p5;
-
- typedef double PrecisionType;
- typedef double CoordRepType;
- typedef otb::StandardMetaImageFunctionBuilder<PrecisionType,
- CoordRepType> BuilderType;
-
- typedef otb::Image<PrecisionType, 2> ImageType;
- typedef otb::VectorImage<PrecisionType, 2> VectorImageType;
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::ImageFileReader<VectorImageType> VectorImageReaderType;
-
- typedef BuilderType::MetaImageFunctionType MetaImageFunctionType;
- typedef BuilderType::DataObjectContainerType DataObjectContainerType;
-
- typedef otb::FlusserMomentsImageFunction<ImageType, CoordRepType> FlusserMomentsIF;
- typedef otb::ImageFunctionAdaptor<FlusserMomentsIF, PrecisionType> AdaptedFlusserMomentsIF;
-
- typedef otb::RadiometricMomentsImageFunction<ImageType, CoordRepType> RadiometricMomentsIF;
- typedef otb::ImageFunctionAdaptor<RadiometricMomentsIF, PrecisionType> AdaptedRadiometricMomentsIF;
- typedef otb::FourierMellinDescriptorsImageFunction<ImageType, CoordRepType> FourierMellinDescriptorsIF;
- typedef otb::ImageFunctionAdaptor<FourierMellinDescriptorsIF, PrecisionType> AdaptedFourierMellinDescriptorsIF;
-
- p1.push_back(7);
- p1.push_back(128);
- p1.push_back(0);
- p1.push_back(1500);
-
- p2.push_back(6);
-
- p3.push_back(5);
-
- p4.push_back(9);
- p4.push_back(5);
- p4.push_back(5);
-
- p5.push_back(10);
- p5.push_back(1);
- p5.push_back(1500);
- p5.push_back(16);
- p5.push_back(4);
-
- // instantiation
- ImageReaderType::Pointer Ireader = ImageReaderType::New();
- VectorImageReaderType::Pointer VIreader = VectorImageReaderType::New();
-
- BuilderType::Pointer builder = BuilderType::New();
-
- Ireader->SetFileName(inputFilename);
- VIreader->SetFileName(inputFilename);
-
- builder->AddImage(Ireader->GetOutput());
- builder->SetNeighborhoodRadius(8);
-
- builder->SetLocalHistogramIFParameters(p1);
- builder->SetFlusserMomentsIFParameters(p2);
- builder->SetRadiometricMomentsIFParameters(p3);
- builder->SetFourierMellinDescriptorsIFParameters(p4);
- builder->SetHaralickTexturesIFParameters(p5);
-
- builder->AddImage(VIreader->GetOutput());
-
- MetaImageFunctionType::Pointer MIF = builder->GetMetaImageFunction();
- std::cout << MIF << std::endl;
-
- DataObjectContainerType DOC = builder->GetDataObjectContainer();
- std::cout << "DataObjectContainer.size(): " << DOC.size() << std::endl;
-
- std::cout << static_cast<AdaptedRadiometricMomentsIF *>(MIF->GetNthFunction(0))->GetInternalImageFunction()
- << std::endl;
- std::cout << static_cast<AdaptedRadiometricMomentsIF *>(MIF->GetNthFunction(3))->GetInternalImageFunction()
- << std::endl;
-
-
- std::cout << static_cast<AdaptedFlusserMomentsIF *>(MIF->GetNthFunction(1))->GetInternalImageFunction()
- << std::endl;
- std::cout << static_cast<AdaptedFlusserMomentsIF *>(MIF->GetNthFunction(7))->GetInternalImageFunction()
- << std::endl;
-
- std::cout << static_cast<AdaptedFourierMellinDescriptorsIF *>(MIF->GetNthFunction(2))->GetInternalImageFunction()
- << std::endl;
- std::cout << static_cast<AdaptedFourierMellinDescriptorsIF *>(MIF->GetNthFunction(11))->GetInternalImageFunction()
- << std::endl;
-
-/*
- std::cout << static_cast<AdaptedLocalHistogramIF *>(MIF->GetNthFunction())->GetInternalImageFunction()
- << std::endl;
- std::cout << static_cast<AdaptedLocalHistogramIF *>(MIF->GetNthFunction(5))->GetInternalImageFunction()
- << std::endl;
-
- std::cout << static_cast<AdaptedHaralickTexturesIF *>(MIF->GetNthFunction(4))->GetInternalImageFunction()
- << std::endl;
- std::cout << static_cast<AdaptedHaralickTexturesIF *>(MIF->GetNthFunction(21))->GetInternalImageFunction()
- << std::endl;
-*/
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/CMakeLists.txt b/Modules/Detection/RoadExtraction/CMakeLists.txt
deleted file mode 100644
index 7bb7b02fa9cc2361802ec609782cd7bb9488749b..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBRoadExtraction)
-otb_module_impl()
diff --git a/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.h b/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.h
deleted file mode 100644
index fda5cfa3c111a11ce9354629dee45f43d47137e4..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.h
+++ /dev/null
@@ -1,94 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBreakAngularPathListFilter_h
-#define otbBreakAngularPathListFilter_h
-
-#include "otbPathListToPathListFilter.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** \class BreakAngularPathListFilter
- * \brief CBase class for breaking angulars the input PathList, returning a PathList.
- *
- * \example FeatureExtraction/ExtractRoadByStepsExample.cxx
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TPath>
-class ITK_EXPORT BreakAngularPathListFilter
- : public PathListToPathListFilter<TPath>
-{
-public:
- /** Standard typedefs */
- typedef BreakAngularPathListFilter Self;
- typedef PathListToPathListFilter<TPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(BreakAngularPathListFilter, PathListToPathListFilter);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PathType PathType;
- typedef typename Superclass::PathListType PathListType;
- typedef typename Superclass::PathPointerType PathPointerType;
- typedef typename PathListType::Pointer PathListPointerType;
-
- typedef double MaxAngleType;
-
- /** Set/Get the max angle */
- itkSetMacro(MaxAngle, MaxAngleType);
- itkGetConstMacro(MaxAngle, MaxAngleType);
-
-protected:
- /** Constructor */
- BreakAngularPathListFilter();
- /** Destructor */
- ~BreakAngularPathListFilter() override {}
- /** GenerateData method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- BreakAngularPathListFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /** Calculate break angular for a path */
- void BreakAngularPath(const MaxAngleType maxAngle,
- const PathPointerType inputPath,
- PathListPointerType outputPathList);
-
- /** Max angle value */
- MaxAngleType m_MaxAngle;
-
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbBreakAngularPathListFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.hxx b/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.hxx
deleted file mode 100644
index 5fcec599fd55dc345d293a089f3d070f24dddf8e..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbBreakAngularPathListFilter.hxx
+++ /dev/null
@@ -1,127 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBreakAngularPathListFilter_hxx
-#define otbBreakAngularPathListFilter_hxx
-
-#include "otbBreakAngularPathListFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath>
-BreakAngularPathListFilter<TPath>
-::BreakAngularPathListFilter()
-{
-}
-
-template <class TPath>
-void
-BreakAngularPathListFilter<TPath>
-::BreakAngularPath(const MaxAngleType maxAngle, const PathPointerType inputPath, PathListPointerType outputPathList)
-{
- typename PathType::VertexListType::ConstPointer vertexList = inputPath->GetVertexList();
- typename PathType::VertexListType::ConstIterator pathIt = vertexList->Begin();
-
- typename PathType::VertexType pixel1, pixel2, pixel3;
-
- // Initialization
- PathPointerType newPath = PathType::New();
- newPath->Initialize();
-
- double alpha1(0.), alpha2(0.);
-
- while (pathIt != vertexList->End())
- {
- // Add Pixel 1
- newPath->AddVertex(pathIt.Value());
- pixel1 = pathIt.Value();
- ++pathIt;
- if (pathIt != vertexList->End())
- {
- pixel2 = pathIt.Value();
- ++pathIt;
- if (pathIt != vertexList->End())
- {
- pixel3 = pathIt.Value();
-
- alpha1 = std::atan2((pixel1[1] - pixel2[1]), (pixel1[0] - pixel2[0]));
- alpha2 = std::atan2((pixel2[1] - pixel3[1]), (pixel2[0] - pixel3[0]));
- alpha1 = (alpha1 >= 0) ? alpha1 : (alpha1 + CONST_2PI);
- alpha2 = (alpha2 >= 0) ? alpha2 : (alpha2 + CONST_2PI);
- if (std::abs(alpha1 - alpha2) > static_cast<double>(maxAngle))
- {
- // Add Pixel 2
- newPath->AddVertex(pixel2);
- //Create new PathType in the out path list
- outputPathList->PushBack(newPath);
- // Reinit
- newPath = PathType::New();
-
- }
- --pathIt; // Return previous pixel
- }
- else
- {
- // Add last Pixel (Pixel 2)
- newPath->AddVertex(pixel2);
- }
- }
- }
- //Create new PathType in the out list
- outputPathList->PushBack(newPath);
-}
-
-template <class TPath>
-void
-BreakAngularPathListFilter<TPath>
-::GenerateData()
-{
- const PathListType * inputPathList = this->GetInput();
- PathListType * outputPathList = this->GetOutput();
-
- typename PathListType::ConstIterator listIt = inputPathList->Begin();
- outputPathList->Clear();
-
- PathListPointerType newTempPathList = PathListType::New();
- while (listIt != inputPathList->End())
- {
- (void) BreakAngularPath(m_MaxAngle, listIt.Get(), outputPathList);
- ++listIt;
- }
-}
-
-/**
- * PrintSelf Method
- */
-template <class TPath>
-void
-BreakAngularPathListFilter<TPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Angular max value : " << m_MaxAngle << std::endl;
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.h b/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.h
deleted file mode 100644
index 6c57fa13c9c52783693e4e699eaf689fbaf2ff7d..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.h
+++ /dev/null
@@ -1,255 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbGenericRoadExtractionFilter_h
-#define otbGenericRoadExtractionFilter_h
-
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkGradientRecursiveGaussianImageFilter.h"
-
-#include "otbVectorImage.h"
-#include "otbImageToPathListFilter.h"
-#include "itkSqrtImageFilter.h"
-#include "otbNeighborhoodScalarProductFilter.h"
-#include "otbNonMaxRemovalByDirectionFilter.h"
-#include "otbVectorizationPathListFilter.h"
-#include "otbSimplifyPathListFilter.h"
-#include "otbBreakAngularPathListFilter.h"
-#include "otbRemoveTortuousPathListFilter.h"
-#include "otbLinkPathListFilter.h"
-#include "otbRemoveIsolatedByDirectionFilter.h"
-#include "otbRemoveWrongDirectionFilter.h"
-#include "otbLikelihoodPathListFilter.h"
-
-namespace otb
-{
-/**
- * \class GenericRoadExtractionFilter
- * \brief This class performs the extraction of roads from an image.
- *
- * This composite filter implements a fast and robust road extraction
- * for high resolution satellite images. The line
- * detection is done using a Gaussian gradient with a scalar product to find
- * the road directions. Finally, extracted roads are vectorized and
- * processed to improve the results removing some occultations and false
- * detections.
- *
- * The full method is detailed in E. Christophe and J. Inglada, "Robust Road
- * Extraction for High Resolution Satellite Images," in IEEE International
- * Conference on Image Processing, ICIP'07, 2007.
- *
- * This filter is fast, as the detection typically takes 3 seconds for a
- * 1000 \f$ \times \f$ 1000 images with four spectral bands. Results can be
- * used as an initialization for more complex algorithms.
- *
- * \sa itk::SqrtImageFilter
- * \sa itk::GradientRecursiveGaussianImageFilter
- * \sa NeighborhoodScalarProductFilter
- * \sa RemoveIsolatedByDirectionFilter
- * \sa RemoveWrongDirectionFilter
- * \sa NonMaxRemovalByDirectionFilter
- * \sa VectorizationPathListFilter
- * \sa SimplifyPathListFilter
- * \sa BreakAngularPathListFilter
- * \sa RemoveTortuousPathListFilter
- * \sa LinkPathListFilter
- * \sa LikelihoodPathListFilter
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputImage, class TOutputPath>
-class ITK_EXPORT GenericRoadExtractionFilter
- : public ImageToPathListFilter<TInputImage, TOutputPath>
-{
-public:
- /** Standard typedefs */
- typedef GenericRoadExtractionFilter Self;
- typedef ImageToPathListFilter<TInputImage, TOutputPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(GenericRoadExtractionFilter, ImageToPathListFilter);
- /** Template parameters typedefs */
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::OutputPathType OutputPathType;
- typedef typename Superclass::OutputPathListType OutputPathListType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef double InternalPixelType;
-
- typedef otb::VectorImage<InternalPixelType, InputImageType::ImageDimension> VectorImageType;
- typedef otb::Image<InternalPixelType, InputImageType::ImageDimension> ModulusType;
- typedef otb::Image<InternalPixelType, InputImageType::ImageDimension> DirectionType;
-
- typedef itk::CovariantVector<InternalPixelType, InputImageType::ImageDimension>
- VectorPixelType;
- typedef otb::Image<VectorPixelType, InputImageType::ImageDimension> CovariantVectorImageType;
-
- typedef itk::SqrtImageFilter<
- InputImageType,
- InputImageType> SquareRootImageFilterType;
-
- typedef itk::GradientRecursiveGaussianImageFilter<
- InputImageType,
- CovariantVectorImageType> GradientFilterType;
-
- typedef NeighborhoodScalarProductFilter<
- CovariantVectorImageType,
- ModulusType,
- DirectionType> NeighborhoodScalarProductFilterType;
-
- typedef RemoveIsolatedByDirectionFilter<
- ModulusType,
- DirectionType,
- ModulusType> RemoveIsolatedByDirectionFilterType;
-
- typedef RemoveWrongDirectionFilter<
- ModulusType,
- DirectionType,
- ModulusType> RemoveWrongDirectionFilterType;
-
- typedef NonMaxRemovalByDirectionFilter<
- ModulusType,
- DirectionType,
- ModulusType> NonMaxRemovalByDirectionFilterType;
-
- typedef VectorizationPathListFilter<
- ModulusType,
- DirectionType,
- OutputPathType> VectorizationPathListFilterType;
-
- typedef SimplifyPathListFilter<OutputPathType> SimplifyPathListFilterType;
- typedef BreakAngularPathListFilter<OutputPathType> BreakAngularPathListFilterType;
- typedef RemoveTortuousPathListFilter<OutputPathType> RemoveTortuousPathListFilterType;
- typedef LinkPathListFilter<OutputPathType> LinkPathListFilterType;
- typedef LikelihoodPathListFilter<OutputPathType, ModulusType> LikelihoodPathListFilterType;
-
- /** Template parameters typedefs for internals filters */
- typedef typename GradientFilterType::RealType SigmaType;
- typedef typename VectorizationPathListFilterType::InputPixelType AmplitudeThresholdType;
-// typedef typename SimplifyPathListFilterType::ToleranceType ToleranceType;
- typedef double ToleranceType;
- typedef typename BreakAngularPathListFilterType::MaxAngleType MaxAngleType;
-// typedef typename RemoveTortuousPathListFilterType::MeanDistanceThresholdType MeanDistanceThresholdType;
- typedef double MeanDistanceThresholdType;
- typedef typename LinkPathListFilterType::RealType LinkRealType;
-
- /** Get/Set the alpha value */
- itkGetConstReferenceMacro(Alpha, double);
- itkSetMacro(Alpha, double);
-
- /** Get/Set the amplitude threshold to start following a path (use by the VectorizationPathListFilter)*/
- itkSetMacro(AmplitudeThreshold, AmplitudeThresholdType);
- itkGetMacro(AmplitudeThreshold, AmplitudeThresholdType);
-
- /** Get/Set the tolerance for segment consistency (tolerance in terms of distance) (use by the SimplifyPathListFilter)*/
- itkGetMacro(Tolerance, ToleranceType);
- itkSetMacro(Tolerance, ToleranceType);
-
- /** Get/Set the resolution */
- itkGetMacro(Resolution, double);
- itkSetMacro(Resolution, double);
-
- /** Set/Get the max angle (use bye the BreakAngularPathListFilter)*/
- itkSetMacro(MaxAngle, MaxAngleType);
- itkGetConstMacro(MaxAngle, MaxAngleType);
-
- /** Get/Set the tolerance for segment consistency (tolerance in terms of distance) (use by RemoveTortuousPathListFilter)*/
- itkGetMacro(FirstMeanDistanceThreshold, MeanDistanceThresholdType);
- itkSetMacro(FirstMeanDistanceThreshold, MeanDistanceThresholdType);
- itkGetMacro(SecondMeanDistanceThreshold, MeanDistanceThresholdType);
- itkSetMacro(SecondMeanDistanceThreshold, MeanDistanceThresholdType);
-
- /** Get/Set the angular threshold (use by LinkPathFilter)*/
- itkSetMacro(AngularThreshold, LinkRealType);
- itkGetMacro(AngularThreshold, LinkRealType);
- /** Get/Set the distance threshold (use by LinkPathFilter)*/
- itkSetMacro(DistanceThreshold, LinkRealType);
- itkGetMacro(DistanceThreshold, LinkRealType);
-
-protected:
- /** Constructor */
- GenericRoadExtractionFilter();
- /** Destructor */
- ~GenericRoadExtractionFilter() override {}
-
- /** Prepare main computation method
- * Note : this function isn't called
- */
- void BeforeGenerateData(void);
-
- /** Main computation method */
- void GenerateData(void) override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
-
- GenericRoadExtractionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- typename SquareRootImageFilterType::Pointer m_SquareRootImageFilter;
- typename GradientFilterType::Pointer m_GradientFilter;
- typename NeighborhoodScalarProductFilterType::Pointer m_NeighborhoodScalarProductFilter;
- typename RemoveIsolatedByDirectionFilterType::Pointer m_RemoveIsolatedByDirectionFilter;
- typename RemoveWrongDirectionFilterType::Pointer m_RemoveWrongDirectionFilter;
- typename NonMaxRemovalByDirectionFilterType::Pointer m_NonMaxRemovalByDirectionFilter;
- typename VectorizationPathListFilterType::Pointer m_VectorizationPathListFilter;
- typename SimplifyPathListFilterType::Pointer m_FirstSimplifyPathListFilter;
- typename SimplifyPathListFilterType::Pointer m_SecondSimplifyPathListFilter;
- typename BreakAngularPathListFilterType::Pointer m_BreakAngularPathListFilter;
- typename RemoveTortuousPathListFilterType::Pointer m_FirstRemoveTortuousPathListFilter;
- typename RemoveTortuousPathListFilterType::Pointer m_SecondRemoveTortuousPathListFilter;
- typename LinkPathListFilterType::Pointer m_LinkPathListFilter;
- typename LikelihoodPathListFilterType::Pointer m_LikelihoodPathListFilter;
-
- /** Amplitude threshold to start following a path (use by the VectorizationPathListFilter)*/
- AmplitudeThresholdType m_AmplitudeThreshold;
- /** Tolerance for segment consistency (tolerance in terms of distance) (use by the SimplifyPathListFilter)*/
- ToleranceType m_Tolerance;
- /** Max angle (use bye the BreakAngularPathListFilter)*/
- MaxAngleType m_MaxAngle;
- /** Tolerance for segment consistency (tolerance in terms of distance) (use by RemoveTortuousPathListFilter)*/
- MeanDistanceThresholdType m_FirstMeanDistanceThreshold;
- MeanDistanceThresholdType m_SecondMeanDistanceThreshold;
- /** The angular threshold (use by LinkPathListFilter) */
- LinkRealType m_AngularThreshold;
-
- /** The distance threshold (use by LinkPathListFilter) */
- double m_DistanceThreshold;
-
- /** Alpha. Use to calculate the sigma value used by the GradientRecursiveGaussianImageFilter */
- double m_Alpha;
-
- /** Resolution of the image. Use to calculate the sigma value used by the GradientRecursiveGaussianImageFilter
- and the m_DistanceThreshold value used by the LinkPathListFilter
- This value is set bye the image's spacing.*/
- double m_Resolution;
-
-};
-
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbGenericRoadExtractionFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.hxx b/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.hxx
deleted file mode 100644
index fe69fd3c7894a61ffd07e7a942c54a78e7ef8f14..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbGenericRoadExtractionFilter.hxx
+++ /dev/null
@@ -1,192 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbGenericRoadExtractionFilter_hxx
-#define otbGenericRoadExtractionFilter_hxx
-
-#include "otbGenericRoadExtractionFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputPath>
-GenericRoadExtractionFilter<TInputImage, TOutputPath>
-::GenericRoadExtractionFilter()
-{
- this->SetNumberOfRequiredInputs(1);
- this->SetNumberOfRequiredOutputs(1);
-
- m_SquareRootImageFilter = SquareRootImageFilterType::New();
- m_GradientFilter = GradientFilterType::New();
- m_NeighborhoodScalarProductFilter = NeighborhoodScalarProductFilterType::New();
- m_RemoveIsolatedByDirectionFilter = RemoveIsolatedByDirectionFilterType::New();
- m_RemoveWrongDirectionFilter = RemoveWrongDirectionFilterType::New();
- m_NonMaxRemovalByDirectionFilter = NonMaxRemovalByDirectionFilterType::New();
- m_VectorizationPathListFilter = VectorizationPathListFilterType::New();
- m_FirstSimplifyPathListFilter = SimplifyPathListFilterType::New();
- m_SecondSimplifyPathListFilter = SimplifyPathListFilterType::New();
- m_BreakAngularPathListFilter = BreakAngularPathListFilterType::New();
- m_FirstRemoveTortuousPathListFilter = RemoveTortuousPathListFilterType::New();
- m_SecondRemoveTortuousPathListFilter = RemoveTortuousPathListFilterType::New();
- m_LinkPathListFilter = LinkPathListFilterType::New();
- m_LikelihoodPathListFilter = LikelihoodPathListFilterType::New();
-
- /** Amplitude threshold to start following a path (use by the VectorizationPathListFilter)*/
- m_AmplitudeThreshold = static_cast<AmplitudeThresholdType>(0.00005);
- /** Tolerance for segment consistency (tolerance in terms of distance) (use by the SimplifyPathFilter)*/
- m_Tolerance = static_cast<ToleranceType>(1.);
- /** Max angle (use bye the BreakAngularPathListFilter)*/
- m_MaxAngle = static_cast<MaxAngleType>(CONST_PI_8);
- /** Tolerance for segment consistency (tolerance in terms of distance) (use by RemoveTortuousPathFilter)*/
- m_FirstMeanDistanceThreshold = static_cast<MeanDistanceThresholdType>(1.);
- m_SecondMeanDistanceThreshold = static_cast<MeanDistanceThresholdType>(10.);
- /** The angular threshold (use by LinkPathFilter) */
- m_AngularThreshold = static_cast<LinkRealType>(CONST_PI_8);
-
- /** The distance threshold (use by LinkPathFilter) */
- m_DistanceThreshold = 25.;
-
- /** Alpha value */
- /** Use to calculate the sigma value use by the GradientRecursiveGaussianImageFilter */
- m_Alpha = 1.0;
-
- /** Resolution of the image */
- m_Resolution = 1.;
-}
-/**
- * Prepare main computation method
- */
-template <class TInputImage, class TOutputPath>
-void
-GenericRoadExtractionFilter<TInputImage, TOutputPath>
-::BeforeGenerateData()
-{
- /** Calculation of resolution value */
- typename InputImageType::SpacingType spacing = this->GetInput()->GetSignedSpacing();
- // Getting x Spacing for the resolution
- m_Resolution = static_cast<double>(spacing[0]);
- if (m_Resolution == 0.)
- {
- itkWarningMacro(<< "The image spacing is zero. So the resolution used in the filter is forced to 1.");
- m_Resolution = 1.;
- }
-
-}
-
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputPath>
-void
-GenericRoadExtractionFilter<TInputImage, TOutputPath>
-::GenerateData()
-{
- // // Input images pointers
- typename InputImageType::ConstPointer inputImage = this->GetInput();
- typename OutputPathListType::Pointer outputPathList = this->GetOutput();
-
- ///////////////////////////////////////
- //// Algorithm for road extraction ////
- ///////////////////////////////////////
-
- //
-
- m_SquareRootImageFilter->SetInput(inputImage);
-
- m_GradientFilter->SetInput(m_SquareRootImageFilter->GetOutput());
- /** Sigma calculated with the alpha and image resolution parameters */
- m_GradientFilter->SetSigma(static_cast<SigmaType>(m_Alpha * (1.2 / m_Resolution + 1.)));
- m_GradientFilter->SetUseImageDirection(false);
-
- m_NeighborhoodScalarProductFilter->SetInput(m_GradientFilter->GetOutput());
-
- m_RemoveIsolatedByDirectionFilter->SetInput(m_NeighborhoodScalarProductFilter->GetOutput());
- m_RemoveIsolatedByDirectionFilter->SetInputDirection(m_NeighborhoodScalarProductFilter->GetOutputDirection());
-
- m_RemoveWrongDirectionFilter->SetInput(m_RemoveIsolatedByDirectionFilter->GetOutput());
- m_RemoveWrongDirectionFilter->SetInputDirection(m_NeighborhoodScalarProductFilter->GetOutputDirection());
-
- m_NonMaxRemovalByDirectionFilter->SetInput(m_RemoveWrongDirectionFilter->GetOutput());
- m_NonMaxRemovalByDirectionFilter->SetInputDirection(m_NeighborhoodScalarProductFilter->GetOutputDirection());
-
- m_VectorizationPathListFilter->SetInput(m_NonMaxRemovalByDirectionFilter->GetOutput());
- m_VectorizationPathListFilter->SetInputDirection(m_NeighborhoodScalarProductFilter->GetOutputDirection());
- m_VectorizationPathListFilter->SetAmplitudeThreshold(m_AmplitudeThreshold);
-
- m_FirstSimplifyPathListFilter->SetInput(m_VectorizationPathListFilter->GetOutput());
- m_FirstSimplifyPathListFilter->GetFunctor().SetTolerance(m_Tolerance);
-
- m_BreakAngularPathListFilter->SetInput(m_FirstSimplifyPathListFilter->GetOutput());
- m_BreakAngularPathListFilter->SetMaxAngle(m_MaxAngle);
-
- m_FirstRemoveTortuousPathListFilter->SetInput(m_BreakAngularPathListFilter->GetOutput());
- m_FirstRemoveTortuousPathListFilter->GetFunctor().SetThreshold(m_FirstMeanDistanceThreshold);
-
- m_LinkPathListFilter->SetInput(m_FirstRemoveTortuousPathListFilter->GetOutput());
- m_LinkPathListFilter->SetAngularThreshold(m_AngularThreshold);
- m_LinkPathListFilter->SetDistanceThreshold(static_cast<LinkRealType>(m_DistanceThreshold / m_Resolution));
-
- m_SecondSimplifyPathListFilter->SetInput(m_LinkPathListFilter->GetOutput());
- m_SecondSimplifyPathListFilter->GetFunctor().SetTolerance(m_Tolerance);
-
- m_SecondRemoveTortuousPathListFilter->SetInput(m_SecondSimplifyPathListFilter->GetOutput());
- m_SecondRemoveTortuousPathListFilter->GetFunctor().SetThreshold(m_SecondMeanDistanceThreshold);
-
- m_LikelihoodPathListFilter->SetInput(m_SecondRemoveTortuousPathListFilter->GetOutput());
- m_LikelihoodPathListFilter->SetInputImage(m_NonMaxRemovalByDirectionFilter->GetOutput());
-
- // Graft output seems to be broken for PolylineParametricPath
- // So we use update, and copy the path to the output path list.
- // m_LikelihoodPathListFilter->GraftOutput(this->GetOutput());
- m_LikelihoodPathListFilter->Update();
- // outputPathList = m_LikelihoodPathListFilter->GetOutput();
- for (typename LikelihoodPathListFilterType::PathListType::ConstIterator it
- = m_LikelihoodPathListFilter->GetOutput()->Begin();
- it != m_LikelihoodPathListFilter->GetOutput()->End();
- ++it)
- {
- outputPathList->PushBack(it.Get());
- }
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputPath>
-void
-GenericRoadExtractionFilter<TInputImage, TOutputPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "m_Alpha:" << m_Alpha << std::endl;
- os << indent << "m_Resolution:" << m_Resolution << std::endl;
- os << indent << "m_AmplitudeThreshold: " << m_AmplitudeThreshold << std::endl;
- os << indent << "m_Tolerance: " << m_Tolerance << std::endl;
- os << indent << "m_MaxAngle: " << m_MaxAngle << std::endl;
- os << indent << "m_FirstMeanDistanceThreshold: " << m_FirstMeanDistanceThreshold << std::endl;
- os << indent << "m_SecondMeanDistanceThreshold: " << m_SecondMeanDistanceThreshold << std::endl;
- os << indent << "m_DistanceThreshold: " << m_DistanceThreshold << std::endl;
- os << indent << "m_AngularThreshold: " << m_AngularThreshold << std::endl;
-
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.h b/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.h
deleted file mode 100644
index bdb44cf1f065d6f29f879f5e6da32b08fea2ca2b..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.h
+++ /dev/null
@@ -1,158 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToPathListAlignFilter_h
-#define otbImageToPathListAlignFilter_h
-
-#include "itkImageSource.h"
-#include "itkConceptChecking.h"
-#include "otbImage.h"
-#include "otbImageToPathListFilter.h"
-#include <vector>
-
-namespace otb
-{
-
-/** \class ImageToPathListAlignFilter
- * \brief Base class used to implement filter to extract align points or group of points and give the coordinates.
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputImage, class TOutputPath>
-class ITK_EXPORT ImageToPathListAlignFilter : public ImageToPathListFilter<TInputImage, TOutputPath>
-{
-public:
- /** Standard class typedefs. */
- typedef ImageToPathListAlignFilter Self;
- typedef ImageToPathListFilter<TInputImage, TOutputPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(ImageToPathListAlignFilter, ImageToPathListFilter);
-// itkTypeMacro(ImageToPathListAlignFilter, itk::ImageSource);
-
- /** ImageDimension constants */
- itkStaticConstMacro(InputImageDimension, unsigned int,
- TInputImage::ImageDimension);
-
- /** Some convenient typedefs. */
- typedef typename Superclass::OutputPathListType OutputPathListType;
-
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::InputImageRegionType InputImageRegionType;
- typedef typename InputImageType::Pointer InputImagePointer;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
-
- typedef typename InputImageType::SizeType SizeType;
- typedef typename InputImageType::ValueType ValueType;
- typedef typename InputImageType::PixelType PixelType;
-
- typedef typename Superclass::OutputPathType OutputPathType;
- // typedef typename Superclass::OutputPathListType OutputPathListType;
- typedef typename Superclass::OutputPathPointerType OutputPathPointerType;
-
-// typedef float RealType;
-//typedef typename itk::NumericTraits<PixelType>::RealType RealType;
- typedef double RealType;
-// typedef typename itk::Image<RealType, InputImageDimension> RealImageType;
- typedef typename otb::Image<RealType, InputImageDimension> RealImageType;
- typedef typename RealImageType::Pointer RealImageTypePointer;
- typedef typename RealImageType::IndexType RealImageTypeIndexType;
-
- /** Spacing (size of a pixel) of the output image. The
- * spacing is the geometric distance between image samples.
- * It is stored internally as double, but may be set from
- * float. \sa GetSpacing() */
- virtual void SetSpacing(const double* spacing);
- virtual void SetSpacing(const float* spacing);
- virtual const double* GetSpacing() const;
-
- /** Set/Get the value for pixels on and off the path.
- * By default, this filter will return a "0" image with path pixels set to 1 */
- itkSetMacro(PathValue, ValueType);
- itkGetMacro(PathValue, ValueType);
- itkSetMacro(BackgroundValue, ValueType);
- itkGetMacro(BackgroundValue, ValueType);
-
- /** The origin of the output image. The origin is the geometric
- * coordinates of the index (0, 0, ..., 0). It is stored internally
- * as double but may be set from float.
- * \sa GetOrigin() */
- virtual void SetOrigin(const double* origin);
- virtual void SetOrigin(const float* origin);
- virtual const double * GetOrigin() const;
-
- /** Set/Get Size */
- itkSetMacro(Size, SizeType);
- itkGetMacro(Size, SizeType);
-
- itkSetMacro(isMeaningfulSegment, bool);
- itkSetMacro(NbGradDirection, int);
- itkSetMacro(NbLineDirection, int);
- itkSetMacro(MinGradNorm, double);
- itkSetMacro(Eps, double);
- itkGetConstReferenceMacro(isMeaningfulSegment, bool);
- itkGetConstReferenceMacro(NbGradDirection, int);
- itkGetConstReferenceMacro(NbLineDirection, int);
- itkGetConstReferenceMacro(MinGradNorm, double);
- itkGetConstReferenceMacro(Eps, double);
-
-protected:
- ImageToPathListAlignFilter();
- ~ImageToPathListAlignFilter() override;
-
- void GenerateOutputInformation() override {} // do nothing
- void GenerateData() override;
- virtual std::vector<double> tab(int n, double p, double m);
- virtual void AngleCalculate(const InputImageType* InputImageIn);
-
- SizeType m_Size;
- double m_Spacing[InputImageDimension];
- double m_Origin[InputImageDimension];
- ValueType m_PathValue;
- ValueType m_BackgroundValue;
-
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- ImageToPathListAlignFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
- bool m_isMeaningfulSegment; /// to get all meaningful segments (maximal or not
- int m_NbGradDirection; /// Number of allowed gradient direction, default 16
- int m_NbLineDirection; /// Number of line directions to scan, default 96)
- double m_MinGradNorm; /// Minimum gradient norm to define a direction, default 2.
- double m_Eps; /// -log10(max. number of false alarms), default 0
- std::vector<double> m_seglist;
-
- RealImageType * m_AngleImage; //Angle image use by GenerateData and AngleCalculate methods
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbImageToPathListAlignFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.hxx b/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.hxx
deleted file mode 100644
index 3ba3ef83d435c64c28995b047ffcfe72a7316c79..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbImageToPathListAlignFilter.hxx
+++ /dev/null
@@ -1,585 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToPathListAlignFilter_hxx
-#define otbImageToPathListAlignFilter_hxx
-
-#include "otbImageToPathListAlignFilter.h"
-#include "itkImageRegionIteratorWithIndex.h"
-#include "itkConstNeighborhoodIterator.h"
-#include "itkPathIterator.h"
-#include "itkNumericTraits.h"
-#include "itkImageLinearIteratorWithIndex.h"
-#include "otbMath.h"
-
-namespace otb
-{
-
-struct one_segment
-{
- short start; /* starting position (distance from border) */
- short end; /* ending position (hence, length is end-start+1) */
- double nfa; /* number of false alarms */
- char ok;
-};
-
-/** Constructor */
-template <class TInputImage, class TOutputPath>
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::ImageToPathListAlignFilter()
-{
- this->SetNumberOfRequiredInputs(1);
- m_Size.Fill(0);
- m_isMeaningfulSegment = false;
- m_NbGradDirection = 16;
- m_NbLineDirection = 96;
- m_MinGradNorm = 2.0;
- m_Eps = 0.0;
-
- for (unsigned int i = 0; i < InputImageDimension; ++i)
- {
- // Set an image spacing for the user
- m_Spacing[i] = 1.0;
- m_Origin[i] = 0;
- }
-
- m_PathValue = itk::NumericTraits<ValueType>::One;
- m_BackgroundValue = itk::NumericTraits<ValueType>::Zero;
-}
-
-/** Destructor */
-template <class TInputImage, class TOutputPath>
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::~ImageToPathListAlignFilter()
-{
-}
-
-//----------------------------------------------------------------------------
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::SetSpacing(const double* spacing)
-{
- unsigned int i;
- for (i = 0; i < InputImageDimension; ++i)
- {
- if (spacing[i] != m_Spacing[i])
- {
- break;
- }
- }
- if (i < InputImageDimension)
- {
- for (i = 0; i < InputImageDimension; ++i)
- {
- m_Spacing[i] = spacing[i];
- }
- this->Modified();
- }
-}
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::SetSpacing(const float* spacing)
-{
- unsigned int i;
- for (i = 0; i < InputImageDimension; ++i)
- {
- if ((double) spacing[i] != m_Spacing[i])
- {
- break;
- }
- }
- if (i < InputImageDimension)
- {
- for (i = 0; i < InputImageDimension; ++i)
- {
- m_Spacing[i] = spacing[i];
- }
- this->Modified();
- }
-}
-
-template <class TInputImage, class TOutputPath>
-const double *
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::GetSpacing() const
-{
- return m_Spacing;
-}
-
-//----------------------------------------------------------------------------
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::SetOrigin(const double* origin)
-{
- unsigned int i;
- for (i = 0; i < InputImageDimension; ++i)
- {
- if (origin[i] != m_Origin[i])
- {
- break;
- }
- }
- if (i < InputImageDimension)
- {
- for (i = 0; i < InputImageDimension; ++i)
- {
- m_Origin[i] = origin[i];
- }
- }
-}
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::SetOrigin(const float* origin)
-{
- unsigned int i;
- for (i = 0; i < InputImageDimension; ++i)
- {
- if ((double) origin[i] != m_Origin[i])
- {
- break;
- }
- }
- if (i < InputImageDimension)
- {
- for (i = 0; i < InputImageDimension; ++i)
- {
- m_Origin[i] = origin[i];
- }
- }
-}
-
-template <class TInputImage, class TOutputPath>
-const double *
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::GetOrigin() const
-{
- return m_Origin;
-}
-
-//----------------------------------------------------------------------------
-/* Algorithm */
-template <class TInputImage, class TOutputPath>
-std::vector<double>
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::tab(int n, double p, double m)
-{
- std::vector<double> out;
- int adr1, adr2, x, y;
-// double lambda;
- double q;
-
- q = 1.0 - p;
- out.resize((n + 1) * (n + 1));
- adr1 = 0;
-
- /*** compute proba (=x among y) ***/
- out[0] = 1.0;
- for (y = 1, adr2 = 0; y <= n; ++y)
- {
- adr1 = adr2;
- adr2 += n + 1;
- out[adr2] = q * out[adr1];
- for (x = 1; x <= y; ++x)
- out[adr2 + x] = p * out[adr1 + x - 1] + q * out[adr1 + x];
- }
-
- /*** sum to obtain proba (>=k among y) ***/
- for (y = 1, adr1 = n + 1; y <= n; ++y, adr1 += n + 1)
- for (x = y - 1; x >= 0; x--)
- out[adr1 + x] += out[adr1 + x + 1];
-
- /*** multiply by m (number of segments) to obtain expectation***/
- for (adr1 = (n + 1) * (n + 1); --adr1 >= 0; )
- out[adr1] *= m;
-
- return out;
-}
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::AngleCalculate(const InputImageType* InputImage)
-{
- double threshold;
- int n, p, x, y;
-
- typename InputImageType::SizeType Taille;
- typename RealImageType::IndexType IndexOut;
-
- Taille = InputImage->GetLargestPossibleRegion().GetSize();
-
- typename RealImageType::RegionType region;
- region.SetSize(InputImage->GetLargestPossibleRegion().GetSize());
- IndexOut[0] = 0;
- IndexOut[1] = 0;
-// region.SetIndex(InputImage->GetLargestPossibleRegion().GetIndex());
- region.SetIndex(IndexOut);
- m_AngleImage->SetRegions(region);
- m_AngleImage->SetOrigin(InputImage->GetOrigin());
- m_AngleImage->SetSignedSpacing(InputImage->GetSignedSpacing());
- m_AngleImage->Allocate();
-
- n = Taille[0];
- p = Taille[1];
-
- threshold = m_MinGradNorm;
- threshold *= threshold;
-
- typename InputImageType::IndexType idx;
-
- for (x = 0; x < p; ++x)
- {
- idx[0] = (n - 1);
- idx[1] = x;
-// indice = (n-1)*p +x
- m_AngleImage->SetPixel(idx, static_cast<RealType>(-1000.0));
- }
- for (y = 0; y < n; ++y)
- {
- idx[0] = y;
- idx[1] = p - 1;
-// indice = p*y+p-1
- m_AngleImage->SetPixel(idx, static_cast<RealType>(-1000.0));
- }
-
- typename InputImageType::IndexType adr;
- RealType PixelA, PixelB, PixelC, PixelD;
- RealType com1, com2, gx, gy, norm;
-
- for (x = 0; x < p - 1; ++x)
- for (y = 0; y < n - 1; ++y)
- {
-// indice = y*p+x
- adr[0] = y;
- adr[1] = x;
- idx[0] = adr[0] + 1;
- idx[1] = adr[1] + 1;
- PixelA = static_cast<RealType>(InputImage->GetPixel(idx));
- idx[0] = adr[0];
- idx[1] = adr[1];
- assert(idx[0] < n);
- assert(idx[1] < p);
- assert(idx[0] >= 0);
- assert(idx[1] >= 0);
- PixelB = static_cast<RealType>(InputImage->GetPixel(idx));
- idx[0] = adr[0] + 1;
- idx[1] = adr[1];
- assert(idx[0] < n);
- assert(idx[1] < p);
- assert(idx[0] >= 0);
- assert(idx[1] >= 0);
- PixelC = static_cast<RealType>(InputImage->GetPixel(idx));
- idx[0] = adr[0];
- idx[1] = adr[1] + 1;
- assert(idx[0] < n);
- assert(idx[1] < p);
- assert(idx[0] >= 0);
- assert(idx[1] >= 0);
- PixelD = static_cast<RealType>(InputImage->GetPixel(idx));
- com1 = PixelA - PixelB;
- com2 = PixelC - PixelD;
- gx = 0.5 * (com1 + com2);
- gy = 0.5 * (com1 - com2);
- norm = gx * gx + gy * gy;
-
- if (norm <= threshold) m_AngleImage->SetPixel(adr, static_cast<RealType>(-1000.0));
- else m_AngleImage->SetPixel(adr, static_cast<RealType>(std::atan2(gx, -gy)));
- }
-}
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::GenerateData(void)
-{
-// SizeType size;
-// double origin[InputImageDimension];
- typename InputImageType::SizeType Taille;
- RealImageTypeIndexType indexAngle;
-// Flist result;
- int iseglist, size_seglist; /* associated counter and dynamic size */
- int iseg, size_seg;
- double nfa, max_nfa;
- std::vector<double> test;
- std::vector<int> count, startbloc, endbloc;
- std::vector<double> seglist; /* list of recorded segments */
- std::vector<one_segment> seg;
- int mx, my, ox, oy, nx, ny, n;
- int xx, yy, pos, posmax, nblocs, inbloc, max_nblocs;
- int cur, i, j, side, l, lphase;
- // int tmp;
- int itheta, ntheta;
- double theta, theta0, dtheta, dx, dy, prec;
- double error = 0.0;
- itkDebugMacro(<< "ImageToPathListAlignFilter::GenerateData() called");
-
- // Get the input and output pointers
- const InputImageType * InputImage = this->GetInput();
- OutputPathListType * OutputPath = this->GetOutput();
- // Generate the image
-
- /* Filter algorithm */
-
- Taille = InputImage->GetLargestPossibleRegion().GetSize();
- nx = Taille[0];
- ny = Taille[1];
- max_nfa = std::pow(10.0, -(m_Eps));
-
-// typename InputImageType::IndexType adr;
-
- /*** maximal length for a line */
- n = (int) std::ceil(hypot((double) nx, (double) ny)) + 1;
-
- /*** compute angle map of u ***/
- RealImageTypePointer lAngleImagePointer = RealImageType::New();
- m_AngleImage = static_cast<RealImageType*>(lAngleImagePointer.GetPointer());
- this->AngleCalculate(InputImage);
-
- /*** compute P(k, l) ***/
- test = tab(n, 1.0 / (double) (m_NbGradDirection), (double) (nx * ny) * (double) (nx * ny));
-
- /*** initialization ***/
- prec = CONST_PI / (double) (m_NbGradDirection);
- ntheta = m_NbLineDirection / 2; /* i.e. # directions of NON-ORIENTED lines */
- dtheta = CONST_PI / (double) ntheta;
-
- /******************** memory allocation ********************/
-
- max_nblocs = n / 2 + 1; /* maximal number of blocs */
- count.resize(max_nblocs);
- startbloc.resize(max_nblocs);
- endbloc.resize(max_nblocs);
-
- size_seg = 10000; /* initial allocation (may reallocate later) */
- seg.resize(size_seg);
-
- size_seglist = 10000; /* initial allocation (may reallocate later) */
- seglist.resize(5 * size_seglist);
-
- /* counter for recorded segments (seglist) */
- iseglist = 0;
-
- /******************** first loop : the four sides ********************/
-
- for (side = 0; side < 4; side++)
- {
- printf("side %d/4 ", side + 1);
-
- theta0 = CONST_PI_2 * (double) side;
- mx = ((side == 0 || side == 2) ? 1 : 0);
- my = ((side == 1 || side == 3) ? 1 : 0);
- ox = ((side == 1) ? nx - 1 : 0);
- oy = ((side == 2) ? ny - 1 : 0);
-
- posmax = nx * mx + ny * my;
-
- /*** second loop : angles ***/
- for (itheta = 0; itheta < ntheta; itheta++)
- {
- printf(".");
- fflush(stdout);
- theta = theta0 + (double) (itheta) * dtheta;
- dx = (double) std::cos((double) theta);
- dy = (double) std::sin((double) theta);
-
- /*** third loop : start positions ***/
- for (pos = 0; pos < posmax; ++pos)
- {
-
- /* clear segment array */
- iseg = 0;
-
- /*** fourth loop : phase for two-spaced pixels ***/
- for (lphase = 0; lphase < 2; lphase++)
- {
-
- /*** detect aligned points by blocs ***/
- inbloc = nblocs = cur = l = count[0] = 0;
- xx = ox + pos * mx + (int) (dx * (double) (l * 2 + lphase));
- yy = oy + pos * my + (int) (dy * (double) (l * 2 + lphase));
-
- for (; xx >= 0 && xx < nx && yy >= 0 && yy < ny; )
- {
- indexAngle[0] = xx;
- indexAngle[1] = yy;
- // indice = yy*nx+xx
- assert(indexAngle[0] < nx);
- assert(indexAngle[1] < ny);
- assert(indexAngle[0] >= 0);
- assert(indexAngle[1] >= 0);
-
- error = static_cast<double>(m_AngleImage->GetPixel(indexAngle));
- if (error > -100.0)
- {
- error -= theta;
- while (error <= -CONST_PI)
- error += CONST_2PI;
- while (error > CONST_PI)
- error -= CONST_2PI;
- if (error < 0.0) error = -error;
- if (error < prec)
- {
- ++cur;
- if (!inbloc)
- {
- startbloc[nblocs] = l;
- inbloc = 1;
- }
- }
- else
- {
- if (inbloc)
- {
- endbloc[nblocs] = l - 1;
- ++nblocs;
- count[nblocs] = cur;
- }
- inbloc = 0;
- }
- }
- /* compute next point */
- ++l;
- xx = ox + pos * mx + (int) (dx * (double) (l * 2 + lphase));
- yy = oy + pos * my + (int) (dy * (double) (l * 2 + lphase));
- }
-
- /*** detect meaningful segments ***/
- for (i = 0; i < nblocs; ++i)
- for (j = i; j < nblocs; ++j)
- if ((nfa = test[count[j + 1] - count[i]
- + (n + 1) * (1 + endbloc[j] - startbloc[i])]) < max_nfa)
- {
- seg[iseg].start = startbloc[i] * 2 + lphase;
- seg[iseg].end = endbloc[j] * 2 + lphase;
- seg[iseg].nfa = nfa;
- seg[iseg].ok = 1;
- iseg++;
- /* reallocate if necessary */
- if (iseg == size_seg)
- {
- size_seg = (size_seg * 3) / 2;
- seg.resize(size_seg);
-// if (!seg)
-// mwerror(FATAL, 1,"Not enough memory.");
- }
- }
- }
- /*** end of phase loop ***/
-
- /*** remove non-maximal segments ***/
- if (!m_isMeaningfulSegment)
- for (i = 0; i < iseg; ++i)
- for (j = 0; j < iseg; ++j)
- if (i != j)
-
- /* seg[i] is included in seg[j] ? */
- if (seg[i].start >= seg[j].start && seg[i].end <= seg[j].end)
- {
-
- /* remove the less meaningful of seg[i] and seg[j] */
- if (seg[i].nfa < seg[j].nfa) seg[j].ok = 0;
- else seg[i].ok = 0;
-
- }
-
- /*** store detected segments ***/
- for (i = 0; i < iseg; ++i)
- if (seg[i].ok)
- {
- seglist[iseglist * 5] = (double) (ox + pos * mx) + dx * (double) (seg[i].start);
- seglist[iseglist * 5 + 1] = (double) (oy + pos * my) + dy * (double) (seg[i].start);
- seglist[iseglist * 5 + 2] = (double) (ox + pos * mx) + dx * (double) (seg[i].end);
- seglist[iseglist * 5 + 3] = (double) (oy + pos * my) + dy * (double) (seg[i].end);
- seglist[iseglist * 5 + 4] = -(double) log10(seg[i].nfa);
- iseglist++;
- /* reallocate seglist if necessary */
- if (iseglist == size_seglist)
- {
- size_seglist = (size_seglist * 3) / 2;
- seglist.resize(size_seglist);
-// if (!seglist)
-// mwerror(FATAL, 1,"Not enough memory.");
- }
- }
- }
- }
- /*** end of second loop ***/
-
- printf(" nb de segments: %d\n", iseglist);
- }
- /******************** end of first loop ********************/
-
- seg.clear();
- endbloc.clear();
- startbloc.clear();
- count.clear();
- test.clear();
-
- /* build segments list */
- seglist.resize(5 * iseglist);
-
- /* build segments list */
- OutputPath->Clear();
-// OutputPath->Resize(iseglist);
-
- typedef typename OutputPathType::ContinuousIndexType ContinuousIndexType;
- typename InputImageType::PointType point;
-
- ContinuousIndexType cindex;
- for (i = 0; i < iseglist; ++i)
- {
-
- OutputPathPointerType path = OutputPathType::New();
-
- path->Initialize();
- point[0] = seglist[i * 5];
- point[1] = seglist[i * 5 + 1];
- InputImage->TransformPhysicalPointToContinuousIndex(point, cindex);
- path->AddVertex(cindex);
- cindex[0] = seglist[i * 5 + 2];
- cindex[1] = seglist[i * 5 + 3];
- path->AddVertex(cindex);
-
- OutputPath->PushBack(path);
- }
- itkDebugMacro(<< "ImageToPathListAlignFilter::GenerateData() finished");
-
-} // end update function
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToPathListAlignFilter<TInputImage, TOutputPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-// os << indent << "Size : " << m_Size << std::endl;
-// os << indent << "Path Value : " << m_PathValue << std::endl;
-// os << indent << "Background Value : " << m_BackgroundValue << std::endl;
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.h b/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.h
deleted file mode 100644
index 26b8f1c84b1ba6ab47644027d48b28e7d124a64f..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.h
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLikelihoodPathListFilter_h
-#define otbLikelihoodPathListFilter_h
-
-#include "otbPathListToPathListFilter.h"
-#include "otbMacro.h"
-#include <string>
-
-namespace otb
-{
-/** \class LikelihoodPathListFilter
- * \brief Affect a value to each path of the list based on the image
- *
- * PathList and image are given as an input, the filter affect a value to each
- * path: this value is equal to the sum of the pixels crossed by the path
- * (using a PolyLineImageConstIterator) divided by the number of points in the
- * path
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TPath, class TImage>
-class ITK_EXPORT LikelihoodPathListFilter
- : public PathListToPathListFilter<TPath>
-{
-public:
- /** Standard typedefs */
- typedef LikelihoodPathListFilter Self;
- typedef PathListToPathListFilter<TPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(LikelihoodPathListFilter, PathListToPathListFilter);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PathType PathType;
- typedef typename Superclass::PathListType PathListType;
- typedef typename Superclass::PathPointerType PathPointerType;
- typedef typename PathListType::Pointer PathListPointerType;
- typedef typename PathListType::ConstIterator IteratorType;
- typedef typename PathType::VertexType VertexType;
- typedef typename PathType::VertexListType VertexListType;
- typedef typename VertexListType::ConstIterator VertexIteratorType;
- typedef double RealType;
-
- typedef TImage ImageType;
- typedef typename ImageType::Pointer ImagePointerType;
- typedef typename ImageType::ConstPointer ImageConstPointerType;
-
- /**
- * Set the input Likelihood image.
- * \param image The Likelihood image.
- */
- void SetInputImage(const ImageType * image);
-
- /**
- * Get the input Likelihood image.
- * \return The input Likelihood image.
- */
- const ImageType * GetInputImage(void);
-
-protected:
- /** Constructor */
- LikelihoodPathListFilter();
- /** Destructor */
- ~LikelihoodPathListFilter() override {}
- /** GenerateData method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- LikelihoodPathListFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- std::string m_Key;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbLikelihoodPathListFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.hxx b/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.hxx
deleted file mode 100644
index f1bcde145d843ae512d228c20b78da49c740f6ad..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbLikelihoodPathListFilter.hxx
+++ /dev/null
@@ -1,100 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLikelihoodPathListFilter_hxx
-#define otbLikelihoodPathListFilter_hxx
-
-#include "otbLikelihoodPathListFilter.h"
-#include "otbPolyLineImageConstIterator.h"
-#include "itkMetaDataObject.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath, class TImage>
-LikelihoodPathListFilter<TPath, TImage>
-::LikelihoodPathListFilter()
-{
- m_Key = "Value";
- this->SetNumberOfRequiredInputs(2);
- this->SetNumberOfRequiredInputs(2);
-}
-template <class TPath, class TImage>
-void
-LikelihoodPathListFilter<TPath, TImage>
-::SetInputImage(const ImageType * image)
-{
- this->itk::ProcessObject::SetNthInput(1, const_cast<ImageType *>(image));
-}
-template <class TPath, class TImage>
-const typename LikelihoodPathListFilter<TPath, TImage>
-::ImageType *
-LikelihoodPathListFilter<TPath, TImage>
-::GetInputImage(void)
-{
- if (this->GetNumberOfInputs() < 1)
- {
- return nullptr;
- }
- return static_cast<const ImageType *>(this->itk::ProcessObject::GetInput(1));
-}
-
-template <class TPath, class TImage>
-void
-LikelihoodPathListFilter<TPath, TImage>
-::GenerateData()
-{
- // I/O wiring
- ImageConstPointerType inputImagePtr = this->GetInputImage();
- const PathListType * inputPtr = this->GetInput();
- PathListType * outputPtr = this->GetOutput();
-
- typedef otb::PolyLineImageConstIterator<ImageType, PathType> ImageIteratorType;
-
- for (IteratorType it = inputPtr->Begin(); it != inputPtr->End(); ++it)
- {
- PathPointerType path = it.Get();
- ImageIteratorType imageIt(inputImagePtr, path);
- double cumulatedValues = 0.0;
- double nbPoints = 0.0;
- for (imageIt.GoToBegin(); !imageIt.IsAtEnd(); ++imageIt, ++nbPoints)
- {
- cumulatedValues += static_cast<double>(imageIt.Get());
- }
- itk::MetaDataDictionary& dict = path->GetMetaDataDictionary();
- itk::EncapsulateMetaData<double>(dict, m_Key, cumulatedValues / nbPoints);
- outputPtr->PushBack(path);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPath, class TImage>
-void
-LikelihoodPathListFilter<TPath, TImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.h b/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.h
deleted file mode 100644
index 6fb1aef06fff2f50bd862718d6a8763357afe71e..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.h
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLinkPathListFilter_h
-#define otbLinkPathListFilter_h
-
-#include "otbPathListToPathListFilter.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** \class LinkPathListFilter
- * \brief This filters link path from the input path list according to distance and angular criterions.
- *
- * This filter examines both ends of each path to link and is able to link several path into one single path.
- * The two criterions to link a path are :
- * - The two ends to link must be closer than the user defined threshold in terms of euclidean distance,
- * - The angle at the link must not be sharp (less than the user defined threshold).
- *
- * Please note that this filter may invert the order of the vertices in the newly created path.
- *
- * This filter is part of the road extraction framework.
- *
- * \sa ParallelLinePathListFilter
- *
- * \ingroup PathFilters
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TPath>
-class ITK_EXPORT LinkPathListFilter
- : public PathListToPathListFilter<TPath>
-{
-public:
- /** Standard typedefs */
- typedef LinkPathListFilter Self;
- typedef PathListToPathListFilter<TPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(LinkPathListFilter, PathListToPathListFilter);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PathType PathType;
- typedef typename Superclass::PathListType PathListType;
- typedef typename Superclass::PathPointerType PathPointerType;
- typedef typename PathListType::Pointer PathListPointerType;
- typedef typename PathListType::ConstIterator IteratorType;
- typedef typename PathType::VertexType VertexType;
- typedef typename PathType::VertexListType VertexListType;
- typedef typename VertexListType::ConstIterator VertexIteratorType;
- typedef double RealType;
-
- itkSetMacro(AngularThreshold, RealType);
- itkGetMacro(AngularThreshold, RealType);
- itkSetMacro(DistanceThreshold, RealType);
- itkGetMacro(DistanceThreshold, RealType);
- itkSetMacro(ModuloPI, bool);
- itkGetMacro(ModuloPI, bool);
-
-protected:
- /** Constructor */
- LinkPathListFilter();
- /** Destructor */
- ~LinkPathListFilter() override {}
- /** GenerateData method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- /**
- * Verify the angular condition to link a path.
- * \param v1 First vertex (before first path ending),
- * \param v2 second vertex (first path ending),
- * \param v3 third vertex (second path beginning),
- * \param v4 fourth vertex (second path after beginning),
- * \return True or false whether the condition is verified or not.
- **/
- bool VerifyAngularCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4);
-
- /**
- * Actually link the end of path p1 to the beginning of path p2.
- * \param p1 First path to link,
- * \param revert1 whether p1 need to be reverted or not,
- * \param p2 second path to link,
- * \param revert2 whether p2 need to be reverted or not,
- * \return the linked path.
- */
- PathPointerType LinkPath(PathPointerType p1, bool revert1, PathPointerType p2, bool revert2);
-
-private:
- LinkPathListFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- RealType m_AngularThreshold;
- RealType m_DistanceThreshold;
-
- /// Do not use the sign of the orientation of the lines
- bool m_ModuloPI;
-
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbLinkPathListFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.hxx b/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.hxx
deleted file mode 100644
index 7b2570338264626746d1614b3c6967d9718877b4..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbLinkPathListFilter.hxx
+++ /dev/null
@@ -1,317 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbLinkPathListFilter_hxx
-#define otbLinkPathListFilter_hxx
-
-#include "otbLinkPathListFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath>
-LinkPathListFilter<TPath>
-::LinkPathListFilter()
-{
- m_DistanceThreshold = 10.;
- m_AngularThreshold = 3.14;
- m_ModuloPI = false;
-}
-
-template <class TPath>
-void
-LinkPathListFilter<TPath>
-::GenerateData()
-{
- // IO
- const PathListType * inputPtr = this->GetInput();
- PathListType * outputPtr = this->GetOutput();
-
- // Input iterator
- IteratorType inputIt = inputPtr->Begin();
-
- std::vector<bool> eraseFlagVector;
-
- // First we copy all input path to output
- while (inputIt != inputPtr->End())
- {
- outputPtr->PushBack(inputIt.Get());
- eraseFlagVector.push_back(false);
- ++inputIt;
- }
-
- IteratorType outputIt1 = outputPtr->Begin();
- unsigned int index1 = 0;
-
- while (outputIt1 != outputPtr->End())
- {
- if (!eraseFlagVector[index1])
- {
- IteratorType outputIt2 = outputIt1;
- ++outputIt2;
- // indicate if a path was found and wath is its index
- unsigned int pathToLinkIndex = 0;
- double distance = -1.0;
- unsigned int index2 = index1 + 1;
- bool found = false;
- bool revert1 = false;
- bool revert2 = false;
- if (!eraseFlagVector[index1])
- {
- while (outputIt2 != outputPtr->End())
- {
- if (!eraseFlagVector[index2])
- {
- //otbMsgDevMacro(<<"Examining links between path "<<index1<<" and path "<<index2);
- // Examining end of path1 with beginning of path2
- VertexIteratorType vSourceIt = outputIt1.Get()->GetVertexList()->End();
- VertexIteratorType vTargetIt = outputIt2.Get()->GetVertexList()->Begin();
- --vSourceIt;
- VertexType v2 = vSourceIt.Value();
- --vSourceIt;
- VertexType v1 = vSourceIt.Value();
- VertexType v3 = vTargetIt.Value();
- ++vTargetIt;
- VertexType v4 = vTargetIt.Value();
- double tmpDistance = std::sqrt(std::pow(v2[0] - v3[0], 2) + std::pow(v2[1] - v3[1], 2));
- if ((tmpDistance < static_cast<double>(m_DistanceThreshold)) && ((!found) || (tmpDistance < distance)))
- {
- if (VerifyAngularCondition(v1, v2, v3, v4))
- {
- // we found a better candidate
- //otbMsgDevMacro(<<"Link between end of path "<<index1<<" and beginning of path "<<index2<<" is currently the best choice");
- distance = tmpDistance;
- pathToLinkIndex = index2;
- revert1 = false;
- revert2 = false;
- if (!found)
- {
- found = true;
- }
- }
- }
- // Examining end of path1 with end of path2
- vTargetIt = outputIt2.Get()->GetVertexList()->End();
- --vTargetIt;
- v3 = vTargetIt.Value();
- --vTargetIt;
- v4 = vTargetIt.Value();
- tmpDistance = std::sqrt(std::pow(v2[0] - v3[0], 2) + std::pow(v2[1] - v3[1], 2));
-
- if ((tmpDistance < static_cast<double>(m_DistanceThreshold)) && ((!found) || (tmpDistance < distance)))
- {
- if (VerifyAngularCondition(v1, v2, v3, v4))
- {
- // we found a better candidate
- //otbMsgDevMacro(<<"Link between end of path "<<index1<<" and end of path "<<index2<<" is currently the best choice");
- distance = tmpDistance;
- pathToLinkIndex = index2;
- revert1 = false;
- revert2 = true;
- if (!found)
- {
- found = true;
- }
- }
- }
- // Examining beginning of path1 with end of path2
- vSourceIt = outputIt1.Get()->GetVertexList()->Begin();
- v2 = vSourceIt.Value();
- ++vSourceIt;
- v1 = vSourceIt.Value();
- tmpDistance = std::sqrt(std::pow(v2[0] - v3[0], 2) + std::pow(v2[1] - v3[1], 2));
-
- if ((tmpDistance < static_cast<double>(m_DistanceThreshold)) && ((!found) || (tmpDistance < distance)))
- {
- if (VerifyAngularCondition(v1, v2, v3, v4))
- {
- // we found a better candidate
- //otbMsgDevMacro(<<"Link between beginning of path "<<index1<<" and end of path "<<index2<<" is currently the best choice");
- distance = tmpDistance;
- pathToLinkIndex = index2;
- revert1 = true;
- revert2 = true;
- if (!found)
- {
- found = true;
- }
- }
- }
- // Examining beginning of path1 with beginning of path2
- vTargetIt = outputIt2.Get()->GetVertexList()->Begin();
- v3 = vTargetIt.Value();
- ++vTargetIt;
- v4 = vTargetIt.Value();
- tmpDistance = std::sqrt(std::pow(v2[0] - v3[0], 2) + std::pow(v2[1] - v3[1], 2));
- if ((tmpDistance < static_cast<double>(m_DistanceThreshold)) && ((!found) || (tmpDistance < distance)))
- {
- if (VerifyAngularCondition(v1, v2, v3, v4))
- {
- // we found a better candidate
- //otbMsgDevMacro(<<"Link between beginning of path "<<index1<<" and beginning of path "<<index2<<" is currently the best choice");
- distance = tmpDistance;
- pathToLinkIndex = index2;
- revert1 = true;
- revert2 = false;
- if (!found)
- {
- found = true;
- }
- }
- }
- }
- ++index2;
- ++outputIt2;
- }
- if (found)
- {
- //otbMsgDevMacro(<<"Search ended, merging path "<<index1<<" and path "<<pathToLinkIndex);
- // an appropriate path was found
- outputIt2 = outputPtr->Begin() + pathToLinkIndex;
- PathPointerType newPath = this->LinkPath(outputIt1.Get(), revert1, outputIt2.Get(), revert2);
- outputPtr->PushBack(newPath);
- // add a non erased flag for the new path
- eraseFlagVector.push_back(false);
- // mark the old path as erased
- eraseFlagVector[index1] = true;
- eraseFlagVector[pathToLinkIndex] = true;
- }
- }
- }
- ++index1;
- // This replaces ++outputIt1 because the iterators is somehow invalidated by a pushback.
- outputIt1 = outputPtr->Begin() + index1;
- }
-
- // search ended, now removing the erased path
- typename std::vector<bool>::reverse_iterator it = eraseFlagVector.rbegin();
- index1 = eraseFlagVector.size() - 1;
- while (it != eraseFlagVector.rend())
- {
- if (eraseFlagVector[index1])
- {
- outputPtr->Erase(index1);
- }
- --index1;
- ++it;
- }
-}
-/**
- * Verify the angular condition to link a path.
- * \param v1 First vertex (before first path ending),
- * \param v2 second vertex (first path ending),
- * \param v3 third vertex (second path beginning),
- * \param v4 fourth vertex (second path after beginning),
- * \return True or false whether the condition is verified or not.
- **/
-template <class TPath>
-bool
-LinkPathListFilter<TPath>
-::VerifyAngularCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4)
-{
- double alpha1 = std::atan2((v2[1] - v1[1]), (v2[0] - v1[0]));
- double alpha2 = std::atan2((v4[1] - v3[1]), (v4[0] - v3[0]));
- double alpha3 = std::atan2((v3[1] - v2[1]), (v3[0] - v2[0]));
-
- if (m_ModuloPI)
- {
- alpha1 = (alpha1 >= 0) ? alpha1 : (alpha1 + CONST_PI);
- alpha2 = (alpha2 >= 0) ? alpha2 : (alpha2 + CONST_PI);
- alpha3 = (alpha3 >= 0) ? alpha3 : (alpha3 + CONST_PI);
- }
- else
- {
- alpha1 = (alpha1 >= 0) ? alpha1 : (alpha1 + CONST_2PI);
- alpha2 = (alpha2 >= 0) ? alpha2 : (alpha2 + CONST_2PI);
- alpha3 = (alpha3 >= 0) ? alpha3 : (alpha3 + CONST_2PI);
- }
-
- bool resp = (std::abs(alpha1 - alpha2) < static_cast<double>(m_AngularThreshold))
- && (std::abs(alpha1 - alpha3) < static_cast<double>(m_AngularThreshold))
- && (std::abs(alpha2 - alpha3) < static_cast<double>(m_AngularThreshold));
- return resp;
-}
-/**
- * Actually link the end of path p1 to the beginning of path p2.
- * \param p1 First path to link,
- * \param revert1 whether p1 need to be reverted or not,
- * \param p2 second path to link,
- * \param revert2 whether p2 need to be reverted or not,
- * \return the linked path.
- */
-template <class TPath>
-typename LinkPathListFilter<TPath>
-::PathPointerType
-LinkPathListFilter<TPath>
-::LinkPath(PathPointerType p1, bool revert1, PathPointerType p2, bool revert2)
-{
- PathPointerType resp = PathType::New();
-
- VertexIteratorType it;
-
- if (revert1)
- {
- for (it = (p1->GetVertexList()->End()); it != p1->GetVertexList()->Begin(); )
- {
- --it;
- resp->AddVertex((it).Value());
- }
- }
- else
- {
- for (it = p1->GetVertexList()->Begin(); it != p1->GetVertexList()->End(); ++it)
- {
- resp->AddVertex((it).Value());
- }
- }
-
- if (revert2)
- {
- for (it = (p2->GetVertexList()->End()); it != p2->GetVertexList()->Begin(); )
- {
- --it;
- resp->AddVertex((it).Value());
- }
- }
- else
- {
- for (it = p2->GetVertexList()->Begin(); it != p2->GetVertexList()->End(); ++it)
- {
- resp->AddVertex(it.Value());
- }
- }
- return resp;
-}
-/**
- * PrintSelf Method
- */
-template <class TPath>
-void
-LinkPathListFilter<TPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.h b/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.h
deleted file mode 100644
index 9406349db143cd333c4ad3359a4196c38667bde8..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.h
+++ /dev/null
@@ -1,94 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbModulusAndDirectionImageToImageFilter_h
-#define otbModulusAndDirectionImageToImageFilter_h
-
-#include "itkImageToImageFilter.h"
-
-namespace otb
-{
-
-/** \class ModulusAndDirectionImageToImageFilter
- *
- * \brief Base class for modulus and direction image filters.
- *
- * This is the base class for alls class' generate an image dulus and
- * by using an modulus and a direction images intputs.
- * SetInput() method set the modulus image input and
- * SetInputDirection() set the image direction input.
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputImage,
- class TInputImageDirection,
- class TOutputImage>
-class ITK_EXPORT ModulusAndDirectionImageToImageFilter : public itk::ImageToImageFilter<TInputImage, TOutputImage>
-{
-public:
- /** Extract dimensions as well of the images of entry of exit. */
- itkStaticConstMacro(InputImageDimension,
- unsigned int,
- TInputImage::ImageDimension);
- itkStaticConstMacro(OutputImageDimension,
- unsigned int,
- TOutputImage::ImageDimension);
-
- /** typedef for the classes standards. */
- typedef ModulusAndDirectionImageToImageFilter Self;
- typedef itk::ImageToImageFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for management of the object factory. */
- itkNewMacro(Self);
-
- /** Return the name of the class. */
- itkTypeMacro(ModulusAndDirectionImageToImageFilter, itk::ImageToImageFilter);
-
- typedef typename Superclass::InputImageType InputImageType;
- typedef TInputImageDirection InputImageDirectionType;
- typedef typename Superclass::OutputImageType OutputImageType;
-
- /** Set/Get the image input of this process object. */
- using Superclass::SetInput;
- void SetInput(const InputImageType *input) override;
- virtual void SetInputDirection(const InputImageDirectionType *direction);
- const InputImageType * GetInput(void);
- const InputImageDirectionType * GetInputDirection(void);
-
-protected:
- ModulusAndDirectionImageToImageFilter();
- ~ModulusAndDirectionImageToImageFilter() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- ModulusAndDirectionImageToImageFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
-};
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbModulusAndDirectionImageToImageFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.hxx b/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.hxx
deleted file mode 100644
index 159b2b95d789e01d3d855e773007fa7ad30e51e1..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbModulusAndDirectionImageToImageFilter.hxx
+++ /dev/null
@@ -1,111 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbModulusAndDirectionImageToImageFilter_hxx
-#define otbModulusAndDirectionImageToImageFilter_hxx
-
-#include "otbModulusAndDirectionImageToImageFilter.h"
-#include "itkProcessObject.h"
-
-namespace otb
-{
-
-/**
- *
- */
-template <class TInputImage, class TOutputImage, class TOutputImageDirection>
-ModulusAndDirectionImageToImageFilter<TInputImage, TOutputImage, TOutputImageDirection>::
-ModulusAndDirectionImageToImageFilter()
-{
- this->SetNumberOfRequiredInputs(2);
- this->SetNumberOfRequiredInputs(2);
- this->SetNumberOfRequiredOutputs(1);
- this->SetNumberOfRequiredOutputs(1);
-
- this->SetNthOutput(0, OutputImageType::New());
-}
-
-template <class TInputImage, class TInputImageDirection, class TOutputImage>
-void
-ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::
-SetInput(const InputImageType *input)
-{
- // Process object is not const-correct so the const_cast is required here
- this->itk::ProcessObject::SetNthInput(0,
- const_cast<InputImageType *>(input));
-}
-
-template <class TInputImage, class TInputImageDirection, class TOutputImage>
-void
-ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::
-SetInputDirection(const InputImageDirectionType *direction)
-{
- // Process object is not const-correct so the const_cast is required here
- this->itk::ProcessObject::SetNthInput(1,
- const_cast<InputImageDirectionType *>(direction));
-}
-
-/** Return the input image modulus */
-template <class TInputImage, class TInputImageDirection, class TOutputImage>
-const typename ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::InputImageType *
-ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::
-GetInput(void)
-{
- if (this->GetNumberOfInputs() < 1)
- {
- return nullptr;
- }
-
- return static_cast<const TInputImage *>
- (this->itk::ProcessObject::GetInput(0));
-}
-
-/** Return the intput image direction */
-template <class TInputImage, class TInputImageDirection, class TOutputImage>
-const typename ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection,
- TOutputImage>::InputImageDirectionType *
-ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::
-GetInputDirection(void)
-{
- if (this->GetNumberOfInputs() < 2)
- {
- return nullptr;
- }
-
- return static_cast<const TInputImageDirection *>
- (this->itk::ProcessObject::GetInput(1));
-
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TInputImage, class TInputImageDirection, class TOutputImage>
-void
-ModulusAndDirectionImageToImageFilter<TInputImage, TInputImageDirection, TOutputImage>::
-PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.h b/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.h
deleted file mode 100644
index b5f2ccb57daa26d30ec5aa8ab1137b312f3e8db6..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.h
+++ /dev/null
@@ -1,111 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNeighborhoodScalarProductFilter_h
-#define otbNeighborhoodScalarProductFilter_h
-
-#include "otbImageToModulusAndDirectionImageFilter.h"
-
-namespace otb
-{
-/** \class NeighborhoodScalarProductFilter
- * \brief This filter is designed to be part of a pipeline aiming at linear feature extraction, such as roads.
- *
- * This filter takes as input a two-band image resulting from a gradient operator. The first channel contains
- * the gradient value in the first image direction, the second contains the gradient value in the second image direction.
- *
- * Assuming that the linear feature we want to detect is darker than its surrounding environnement, we can deduce that
- * the gradient direction will be opposite on each side of the road. Therefore, we compute for each pixel to compute the scalar
- * product of the gradient vector for each opposite pixels in the neighborhood of radius 1 of the pixel to compute.
- *
- * The lower negativ scalar product value along these four pairs of pixel gives us the direction in which there is most
- * likely a linear feature.
- *
- * This filters has two outputs :
- * - The first output (from the GetOutput() method) gives the modulus of the lower negativ scalar product value for this pixel.
- * - The second output (from the GetOutputDirection() method) gives the direction in radian of this linear feature.
- *
- * Please note that there are only 8 possible values for the direction image, corresponding to two directions for each pair of opposite
- * pixels. In our conventions, negatives angle values represent opposite gradient vectors, whereas positive angle values represent convergent
- * gradient vectors.
- * \ingroup Streamed
- * \ingroup Threaded
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputImage, class TOutputModulus, class TOutputDirection>
-class ITK_EXPORT NeighborhoodScalarProductFilter
- : public ImageToModulusAndDirectionImageFilter<TInputImage, TOutputModulus, TOutputDirection>
-{
-public:
- /** Standard typedefs */
- typedef NeighborhoodScalarProductFilter Self;
- typedef ImageToModulusAndDirectionImageFilter<TInputImage, TOutputModulus, TOutputDirection> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NeighborhoodScalarProductFilter, ImageToModulusAndDirectionImageFilter);
-
- /** Template parameters typedefs */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImageConstPointerType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef TOutputModulus OutputModulusType;
- typedef typename OutputModulusType::Pointer OutputModulusPointerType;
- typedef typename OutputModulusType::RegionType RegionType;
- typedef typename OutputModulusType::SizeType SizeType;
- typedef typename OutputModulusType::IndexType IndexType;
- typedef TOutputDirection OutputDirectionType;
- typedef typename OutputDirectionType::Pointer OutputDirectionPointerType;
- typedef typename OutputDirectionType::RegionType OutputImageRegionType;
-
-protected:
- /** Constructor */
- NeighborhoodScalarProductFilter();
- /** Destructor */
- ~NeighborhoodScalarProductFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** NeighborhoodScalarProductImageFilter can be implemented as a multithreaded filter.
- * Therefore, this implementation provides a ThreadedGenerateData() routine
- * which is called for each processing thread. The output image data is
- * allocated automatically by the superclass prior to calling
- * ThreadedGenerateData(). ThreadedGenerateData can only write to the
- * portion of the output image specified by the parameter
- * "outputRegionForThread"
- *
- * \sa ImageToImageFilter::ThreadedGenerateData(),
- * ImageToImageFilter::GenerateData() */
- void ThreadedGenerateData(const OutputImageRegionType& outputRegionForThread,
- itk::ThreadIdType threadId) override;
-private:
- NeighborhoodScalarProductFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNeighborhoodScalarProductFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.hxx b/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.hxx
deleted file mode 100644
index a2f66c9a02e6430f105d371e4ff41002f8b8beba..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbNeighborhoodScalarProductFilter.hxx
+++ /dev/null
@@ -1,181 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNeighborhoodScalarProductFilter_hxx
-#define otbNeighborhoodScalarProductFilter_hxx
-
-#include "otbNeighborhoodScalarProductFilter.h"
-#include "itkImageRegionIterator.h"
-#include "itkConstNeighborhoodIterator.h"
-#include "itkNeighborhoodAlgorithm.h"
-#include "itkProgressReporter.h"
-
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputModulus, class TOutputDirection>
-NeighborhoodScalarProductFilter<TInputImage, TOutputModulus, TOutputDirection>
-::NeighborhoodScalarProductFilter()
-{}
-
-template <class TInputImage, class TOutputModulus, class TOutputDirection>
-void
-NeighborhoodScalarProductFilter<TInputImage, TOutputModulus, TOutputDirection>
-::ThreadedGenerateData(const OutputImageRegionType& outputRegionForThread, itk::ThreadIdType threadId)
-{
- // some typedefs
- typedef itk::ConstNeighborhoodIterator<InputImageType> NeighborhoodIteratorType;
- typedef typename NeighborhoodIteratorType::RadiusType RadiusType;
- typedef typename NeighborhoodIteratorType::OffsetType OffsetType;
- typedef itk::ImageRegionIterator<OutputModulusType> OutputIteratorType;
- typedef itk::ImageRegionIterator<OutputDirectionType> OutputDirectionIteratorType;
- typedef itk::NeighborhoodAlgorithm::ImageBoundaryFacesCalculator<InputImageType> BoundaryFacesCalculatorType;
- typedef typename BoundaryFacesCalculatorType::FaceListType FaceListType;
- typedef typename FaceListType::iterator FaceListIteratorType;
-
- // Pointers on inputs/outputs
- InputImageType * inputPtr = const_cast<InputImageType *>(this->GetInput());
- OutputModulusPointerType outputPtr = this->GetOutput();
- OutputDirectionPointerType outputDirPtr = this->GetOutputDirection();
-
- // Neighborhood radius
- RadiusType r;
- r.Fill(1);
-
- // Find the data-set boundary "faces"
- BoundaryFacesCalculatorType bC;
- FaceListType faceList = bC(inputPtr, outputRegionForThread, r);
- FaceListIteratorType fit;
-
- // support progress methods/callbacks
- itk::ProgressReporter progress(this, threadId, outputRegionForThread.GetNumberOfPixels());
-
- // Process each of the boundary faces. These are N-d regions which border
- // the edge of the buffer.
- for (fit = faceList.begin(); fit != faceList.end(); ++fit)
- {
- NeighborhoodIteratorType neighInputIt(r, inputPtr, *fit);
- OutputIteratorType outputIt(outputPtr, *fit);
- OutputDirectionIteratorType outputDirIt(outputDirPtr, *fit);
- neighInputIt.GoToBegin();
- outputIt.GoToBegin();
- outputDirIt.GoToBegin();
-
- while ((!neighInputIt.IsAtEnd()) && (!outputIt.IsAtEnd()) && (!outputDirIt.IsAtEnd()))
- {
- // local variable initialization
- int neighborhoodNumberMax = 0;
- double scalarMaxValue = 0;
- //TODO for a more general algorithm this might be replaced by:
- //double scalarMaxValue = itk::NumericTraits<double>::NonpositiveMin();
- int flagPosNegDirection = 0;
-
- // walk through each case
- for (int neighborhoodNumber = 0; neighborhoodNumber < 4; ++neighborhoodNumber)
- {
- double scalarCurrentValue = 0.0;
- OffsetType offset1;
- OffsetType offset2;
- switch (neighborhoodNumber)
- {
- case 0:
- offset1[0] = 1;
- offset1[1] = -1;
- offset2[0] = -1;
- offset2[1] = 1;
- break;
- case 1:
- offset1[0] = 1;
- offset1[1] = 0;
- offset2[0] = -1;
- offset2[1] = 0;
- break;
- case 2:
- offset1[0] = 1;
- offset1[1] = 1;
- offset2[0] = -1;
- offset2[1] = -1;
- break;
- case 3:
- offset1[0] = 0;
- offset1[1] = 1;
- offset2[0] = 0;
- offset2[1] = -1;
- break;
- }
- // Get the gradient values
- InputPixelType pixel1 = neighInputIt.GetPixel(offset1);
- InputPixelType pixel2 = neighInputIt.GetPixel(offset2);
-
- // Compute the scalar product
- scalarCurrentValue = -(pixel1[0] * pixel2[0] + pixel1[1] * pixel2[1]);
-
- // If the value is higher than the current max value
- if (scalarCurrentValue > scalarMaxValue)
- {
- // keep this configuration
- scalarMaxValue = scalarCurrentValue;
- neighborhoodNumberMax = neighborhoodNumber;
-
- // Also keep the direction
- if (pixel1[0] < 0)
- {
- flagPosNegDirection = 1;
- }
- else
- {
- flagPosNegDirection = 0;
- }
-
- }
- }
- // Compute the direction
- double angle = static_cast<double>((1 + neighborhoodNumberMax)) * static_cast<double>(CONST_PI_4);
- if (flagPosNegDirection)
- {
- angle -= CONST_PI;
- }
-
- // Set the output values
- outputIt.Set(scalarMaxValue);
- outputDirIt.Set(angle);
- ++neighInputIt;
- ++outputIt;
- ++outputDirIt;
- progress.CompletedPixel();
- }
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TInputImage, class TOutputModulus, class TOutputDirection>
-void
-NeighborhoodScalarProductFilter<TInputImage, TOutputModulus, TOutputDirection>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbNonMaxRemovalByDirectionFilter.h b/Modules/Detection/RoadExtraction/include/otbNonMaxRemovalByDirectionFilter.h
deleted file mode 100644
index 4e6d12cce270fde7ccf6d77c7be4c8e4b55b7ae4..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbNonMaxRemovalByDirectionFilter.h
+++ /dev/null
@@ -1,161 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNonMaxRemovalByDirectionFilter_h
-#define otbNonMaxRemovalByDirectionFilter_h
-
-#include "otbModulusAndDirectionImageToImageFilter.h"
-#include "otbBinaryFunctorNeighborhoodImageFilter.h"
-
-#include "otbMath.h"
-
-namespace otb
-{
-namespace Functor
-{
-/** \class NonMaxRemovalByDirectionFunctor
- * \brief This functor is used by the NonMaxRemovalByDirectionFilter
- * \sa NonMaxRemovalByDirectionFilter
- * \ingroup Functor
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInput1, class TInput2, class TOutput>
-class NonMaxRemovalByDirectionFunctor
-{
-public:
- NonMaxRemovalByDirectionFunctor() {}
- virtual ~NonMaxRemovalByDirectionFunctor() {}
- inline TOutput operator ()(const TInput1& itA, const TInput2& itB)
- {
- TOutput resp = 0;
- if (itA.GetCenterPixel() != 0)
- {
- typename TInput1::OffsetType offset1, offset2;
- offset1.Fill(0);
- offset2.Fill(0);
- int neighborhoodNumber;
- if (itB.GetCenterPixel() > 0)
- {
- neighborhoodNumber = static_cast<int>(itB.GetCenterPixel() / (CONST_PI_4) -1);
- }
- else
- {
- neighborhoodNumber = static_cast<int>((itB.GetCenterPixel() + CONST_PI) / (CONST_PI_4) -1);
- }
- switch (neighborhoodNumber)
- {
- case 0:
- offset1[0] = 1;
- offset1[1] = -1;
- offset2[0] = -1;
- offset2[1] = 1;
- break;
- case 1:
- offset1[0] = 1;
- offset1[1] = 0;
- offset2[0] = -1;
- offset2[1] = 0;
- break;
- case 2:
- offset1[0] = 1;
- offset1[1] = 1;
- offset2[0] = -1;
- offset2[1] = -1;
- break;
- case 3:
- offset1[0] = 0;
- offset1[1] = 1;
- offset2[0] = 0;
- offset2[1] = -1;
- break;
- }
- if ((itA.GetCenterPixel() > itA.GetPixel(offset1))
- && (itA.GetCenterPixel() > itA.GetPixel(offset2)))
- {
- resp = itA.GetCenterPixel();
- }
- }
- return resp;
- }
-};
-}
-/** \class NonMaxRemovalByDirectionFilter
- * \brief This filters removes (sets to null intensity) pixels which are not the maxima of the
- * scalar product modulus value in the given direction.
- *
- * \ingroup Streamed
- * \ingroup Threaded
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputModulus, class TInputDirection, class TOutputImage>
-class ITK_EXPORT NonMaxRemovalByDirectionFilter
- : public ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef NonMaxRemovalByDirectionFilter Self;
- typedef ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NonMaxRemovalByDirectionFilter, ModulusAndDirectionImageToImageFilter);
-
- /** typedef of the computing filter (this allows us to derive from ModulusAndDirectionToImageFilter as well as
- using the BinaryFunctorNeighBorhoodImageFilter, which is appropriate here */
- typedef Functor::NonMaxRemovalByDirectionFunctor<
- typename itk::ConstNeighborhoodIterator<TInputModulus>,
- typename itk::ConstNeighborhoodIterator<TInputDirection>,
- typename TOutputImage::PixelType> FunctorType;
- typedef otb::BinaryFunctorNeighborhoodImageFilter<TInputModulus, TInputDirection, TOutputImage,
- FunctorType> ComputingFilterType;
-
-protected:
- /** Constructor */
- NonMaxRemovalByDirectionFilter() {};
- /** Destructor */
- ~NonMaxRemovalByDirectionFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override
- {
- Superclass::PrintSelf(os, indent);
- }
- /** Main computation method */
- void GenerateData(void) override
- {
- typename ComputingFilterType::Pointer filter = ComputingFilterType::New();
- filter->SetInput1(this->GetInput());
- filter->SetInput2(this->GetInputDirection());
- filter->GraftOutput(this->GetOutput());
- filter->Update();
- this->GraftOutput(filter->GetOutput());
- }
-
-private:
- NonMaxRemovalByDirectionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.h b/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.h
deleted file mode 100644
index 3cabe035adffb2aca8f72e1c236dbe930767dcf5..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.h
+++ /dev/null
@@ -1,161 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbParallelLinePathListFilter_h
-#define otbParallelLinePathListFilter_h
-
-#include "otbPathListToPathListFilter.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** \class ParallelLinePathListFilter
- * \brief Detects parallel lines in imagery, the required input data are a PathList object.
- *
- * The class consists of three basic functions that determine the angle between two lines,
- * the distance between the lines and the common part of the lines. First, all input lines
- * are checked if there is a second line running in the same direction. Thereafter, all line
- * pairs that already fulfilled the angular criterion are checked whether they are close to
- * each other or not, i.e. the orthogonal distance between them is calculated. Finally, it
- * has to be verified if the two lines have a common part since lines may fulfill the two
- * first criteria but be located in different parts of the image. In order to adapt the
- * detection algorithm to the user's needs, the thresholds AngularThreshold, DistanceThreshold
- * and CommonDistanceThreshold can be set.
- *
- * A possible processing chain would be to extract lines with a line detector, to convert the
- * result to PathList object (an ObjectList of PolyLineParametricPath), to link short line
- * segments with the otbLinkPathListFilter to longer lines and to finally detect all parallel
- * long lines.
- *
- * \sa LinkPathListFilter
- *
- * \ingroup PathFilters
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TPath>
-class ITK_EXPORT ParallelLinePathListFilter
- : public PathListToPathListFilter<TPath>
-{
-public:
- /** Standard typedefs */
- typedef ParallelLinePathListFilter Self;
- typedef PathListToPathListFilter<TPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(ParallelLinePathListFilter, PathListToPathListFilter);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PathType PathType;
- typedef typename Superclass::PathListType PathListType;
- typedef typename Superclass::PathPointerType PathPointerType;
- typedef typename PathListType::Pointer PathListPointerType;
- typedef typename PathListType::ConstIterator IteratorType;
- typedef typename PathType::VertexType VertexType;
- typedef typename PathType::VertexListType VertexListType;
- typedef typename VertexListType::ConstIterator VertexIteratorType;
- typedef double RealType;
-
- itkSetMacro(AngularThreshold, RealType);
- itkGetMacro(AngularThreshold, RealType);
- itkSetMacro(DistanceThreshold, RealType);
- itkGetMacro(DistanceThreshold, RealType);
- itkSetMacro(CommonDistanceThreshold, RealType);
- itkGetMacro(CommonDistanceThreshold, RealType);
-
-protected:
- /** Constructor */
- ParallelLinePathListFilter();
- /** Destructor */
- ~ParallelLinePathListFilter() override {}
- /** GenerateData method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- /**
- * Verify the angular condition to find parallel lines.
- * This function verifies if two lines are parallel by
- * computing the angle in relation to the y-axis.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the first criteria to be fulfilled.
- **/
- bool VerifyAngularCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4);
-
- /**
- * Verify the maximum distance condition to find parallel lines.
- * The orthogonal distance between two parallel lines is calculated.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the second criteria to be fulfilled.
- **/
- bool VerifyMaxDistanceCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4);
-
- /**
- * Verify the common distance condition to find parallel lines.
- * The overlapping part of the parallel lines is computed. In case
- * no overlapping part exists or the value is below the specified
- * threshold, false is returned.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the third criteria to be fulfilled.
- **/
- bool VerifyCommonDistanceCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4);
-
- /**
- * Write the first parallel path.
- * p1: First parallel path (line segment),
- */
- PathPointerType WriteParallelPath(PathPointerType p1);
-
-private:
- ParallelLinePathListFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- RealType m_AngularThreshold;
- RealType m_DistanceThreshold;
- RealType m_CommonDistanceThreshold;
-
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbParallelLinePathListFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.hxx b/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.hxx
deleted file mode 100644
index 44eb3c082fa64a768954134cb6fa251f40f6e99f..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbParallelLinePathListFilter.hxx
+++ /dev/null
@@ -1,536 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbParallelLinePathListFilter_hxx
-#define otbParallelLinePathListFilter_hxx
-
-#include "otbParallelLinePathListFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath>
-ParallelLinePathListFilter<TPath>
-::ParallelLinePathListFilter()
-{
- m_DistanceThreshold = 100.;
- m_CommonDistanceThreshold = 10.;
- m_AngularThreshold = 3.14;
-}
-
-template <class TPath>
-void
-ParallelLinePathListFilter<TPath>
-::GenerateData()
-{
- // IO
- const PathListType * inputPtr = this->GetInput();
- PathListType * outputPtr = this->GetOutput();
-
- // Input iterator
- IteratorType inputIt = inputPtr->Begin();
-
- std::vector<bool> eraseFlagVector1;
- std::vector<unsigned int> parallelLineIndex;
-
- // First we copy all input path to output
- while (inputIt != inputPtr->End())
- {
- // Write the next input path always to the
- // last element of the list. This last element is
- // newly created.
- outputPtr->PushBack(inputIt.Get());
-
- // If a new element is copied to the output vector,
- // "false" is written to the corresponding index of
- // the vector eraseFlagVector.
- eraseFlagVector1.push_back(false);
-
- ++inputIt;
- }
-
- unsigned int VectorSize = static_cast<unsigned int>(eraseFlagVector1.size());
- //std::cout<<" Number of Lines: "<< VectorSize <<std::endl;
-
- IteratorType outputIt1 = outputPtr->Begin();
- unsigned int index1 = 0;
- unsigned int firstLineCounter = 0, parallelLineCounter = 0;
- unsigned int commonDistCounter = 0, maxDistCounter = 0;
-
-// Iterate through all lines of the pathlist
- while (firstLineCounter < VectorSize)
- {
- if (!eraseFlagVector1[index1])
- {
- IteratorType outputIt2 = outputIt1;
- ++outputIt2;
- unsigned int index2 = index1 + 1;
-
- // Check if any of the following lines are parallel
- while (outputIt2 != outputPtr->End())
- {
-
- if (!eraseFlagVector1[index2])
- { // Read the first and the last vertex of each line pair that is checked
- VertexIteratorType vSourceIt = outputIt1.Get()->GetVertexList()->Begin();
- VertexType v1 = vSourceIt.Value();
- vSourceIt = outputIt1.Get()->GetVertexList()->End();
- --vSourceIt;
- VertexType v2 = vSourceIt.Value();
-
- VertexIteratorType vTargetIt = outputIt2.Get()->GetVertexList()->Begin();
- VertexType v3 = vTargetIt.Value();
- vTargetIt = outputIt2.Get()->GetVertexList()->End();
- --vTargetIt;
- VertexType v4 = vTargetIt.Value();
-
- // Check for parallel lines
- if (VerifyAngularCondition(v1, v2, v3, v4))
- {
- ++parallelLineCounter;
- if (VerifyMaxDistanceCondition(v1, v2, v3, v4))
- {
- ++maxDistCounter;
- if (VerifyCommonDistanceCondition(v1, v2, v3, v4))
- {
- ++commonDistCounter;
- // Write index of first parallel path
- parallelLineIndex.push_back(index1);
-
- // Write index of second parallel path
- parallelLineIndex.push_back(index2);
- }
- }
- }
- }
-
- ++index2;
- ++outputIt2;
- }
- }
-
- // mark the old path as erased
- eraseFlagVector1[index1] = true;
- ++firstLineCounter;
- ++index1;
- ++outputIt1;
- } // end of for loop
-
- otbMsgDevMacro( << "Number of line pairs that pass the angular condition: " << parallelLineCounter );
- otbMsgDevMacro( << "Number of line pairs that pass the maximum distance condition: " << maxDistCounter );
- otbMsgDevMacro( << "Number of line pairs that pass the common distance condition: " << commonDistCounter );
-
- // Write all parallel lines and set the non-erase flagg.
- typename std::vector<unsigned int>::iterator lineIt1 = parallelLineIndex.begin();
- unsigned int sortLineIndex = 0;
- while (lineIt1 != parallelLineIndex.end())
- {
- IteratorType outputIt3 = outputPtr->Begin() + parallelLineIndex[sortLineIndex];
-
- PathPointerType newPath1 = this->WriteParallelPath(outputIt3.Get());
- outputPtr->PushBack(newPath1);
- // add a non-erase flag for the new path
- eraseFlagVector1.push_back(false);
- ++sortLineIndex;
- otbMsgDevMacro( << "Number of lines written in the path list: " << sortLineIndex );
- ++lineIt1;
- }
-
- // Search ended, now removing the erased path from the first line pointer
- typename std::vector<bool>::reverse_iterator it1 = eraseFlagVector1.rbegin();
- index1 = eraseFlagVector1.size() - 1;
- while (it1 != eraseFlagVector1.rend())
- {
- if (eraseFlagVector1[index1])
- {
- outputPtr->Erase(index1);
- }
-
- --index1;
- ++it1;
- }
-
-}
-/**
- * Verify the angular condition to find parallel lines.
- * This function verifies if two lines are parallel by
- * computing the angle in relation to the y-axis.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the first criteria to be fulfilled.
- **/
-template <class TPath>
-bool
-ParallelLinePathListFilter<TPath>
-::VerifyAngularCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4)
-{
- double alpha1 = std::atan2((v2[1] - v1[1]), (v2[0] - v1[0]));
- double alpha2 = std::atan2((v4[1] - v3[1]), (v4[0] - v3[0]));
-
- alpha1 = (alpha1 >= 0) ? alpha1 : (alpha1 + CONST_PI);
- alpha2 = (alpha2 >= 0) ? alpha2 : (alpha2 + CONST_PI);
-
- // Return true if the angle between the two lines is smaller than
- // the specified threshold.
- bool angle = (std::abs(alpha1 - alpha2) < static_cast<double>(m_AngularThreshold));
-
- return angle;
-}
-
-/**
- * Verify the maximum distance condition to find parallel lines.
- * The orthogonal distance between two parallel lines is calculated.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the second criteria to be fulfilled.
- **/
-template <class TPath>
-bool
-ParallelLinePathListFilter<TPath>
-::VerifyMaxDistanceCondition(VertexType v1, VertexType v2, VertexType v3, VertexType itkNotUsed(v4))
-{
- // Compute the direction vector of the first line
- VertexType vectorDir12;
-
- vectorDir12[0] = v2[0] - v1[0];
- vectorDir12[1] = v2[1] - v1[1];
-
- // Compute the orthogonal distance between the two parallel lines
- // with equation d = |(v3 - v1)X(v2 - v1)|/|v2 - v1|
- double distance = 0., denominator = 0., nominator = 0.;
- denominator = std::abs((v3[0] - v1[0]) * vectorDir12[1] - (v3[1] - v1[1]) * vectorDir12[0]);
- nominator = sqrt(pow(vectorDir12[0], 2) + pow(vectorDir12[1], 2));
- distance = denominator / nominator;
- //std::cout<< "Distance between two parallel lines: " << distance <<std::endl;
-
- // Check if the orthogonal distance between the lines
- // is beneath the chosen threshold.
- bool dist = (distance <= static_cast<double>(m_DistanceThreshold));
-
- return dist;
-}
-
-/**
- * Verify the common distance condition to find parallel lines.
- * The overlapping part of the parallel lines is computed. In case
- * no overlapping part exists or the value is below the specified
- * threshold, false is returned.
- * First line segment: v1 is the first vertex, v2 the second one
- * (not necessarily the path ending).
- * Second line segment: v3 is the first vertex, v4 the second one
- * (not necessarily the path ending).
- * Return true if the condition is verified.
- *
- * This is the third criteria to be fulfilled.
- **/
-template <class TPath>
-bool
-ParallelLinePathListFilter<TPath>
-::VerifyCommonDistanceCondition(VertexType v1, VertexType v2, VertexType v3, VertexType v4)
-{
-// Compute the length of each line
- double length12 = 0.;
- // double length34 = 0.;
- length12 = sqrt(pow((v2[0] - v1[0]), 2) + pow((v2[1] - v1[1]), 2));
- //length34 = sqrt(pow((v4[0] - v3[0]), 2) + pow((v4[1] - v3[1]), 2));
-
- // Set v1[0] to zero and align the y-axis of
- // the new coordinate system with line one (v1 and v2).
- // Compute the coordinates of the first and of the
- // second line in the new coordinate system.
- VertexType tempv1, tempv2, tempv3, tempv4;
-
- //Initialization
- tempv1.Fill(0.);
- tempv2.Fill(0.);
- tempv3.Fill(0.);
- tempv4.Fill(0.);
-
- if (v1[1] == v2[1])
- {
- if (v1[0] < v2[0])
- {
- tempv1[0] = 0., tempv1[1] = 0.;
- tempv2[0] = 0., tempv2[1] = length12;
- tempv3[0] = v3[0] - v1[0], tempv3[1] = v3[1] - v1[1];
- tempv4[0] = v4[0] - v1[0], tempv4[1] = v4[1] - v1[1];
- }
- else
- {
- tempv2[0] = 0., tempv2[1] = 0.;
- tempv1[0] = 0., tempv1[1] = length12;
- tempv3[0] = v3[0] - v2[0], tempv3[1] = v3[1] - v2[1];
- tempv4[0] = v4[0] - v2[0], tempv4[1] = v4[1] - v2[1];
- }
- }
- // Check the direction of the line (vector).
- // The origin of the new coordinate system is
- // set to the smaller of the two vertices.
- // Then, a rotation and translation of the vertices
- // of the second line (v3 and v4) to the new coordinate
- // system is performed.
-
- VertexType temptransv3, temptransv4;
-
- if (v1[1] < v2[1])
- {
- if (v1[0] == v2[0])
- {
- tempv1[0] = 0., tempv1[1] = 0.;
- tempv2[0] = 0., tempv2[1] = length12;
- tempv3[0] = v3[0] - v1[0], tempv3[1] = v3[1] - v1[1];
- tempv4[0] = v4[0] - v1[0], tempv4[1] = v4[1] - v1[1];
- }
-
- else
- {
- // Coordinates of the first line in the new coordinate system
- tempv1[0] = 0.;
- tempv1[1] = 0.;
- tempv2[0] = 0.;
- tempv2[1] = length12;
-
- // Rotate the system clockwise
- double sinealpha;
- if (v2[0] > v1[0])
- {
- sinealpha = (v2[0] - v1[0]) / length12;
- }
- else
- {
- sinealpha = (v1[0] - v2[0]) / length12;
- }
- double alpha1 = std::asin(sinealpha);
-
- // Translation
- temptransv3[0] = v3[0] - v1[0];
- temptransv3[1] = v3[1] - v1[1];
- temptransv4[0] = v4[0] - v1[0];
- temptransv4[1] = v4[1] - v1[1];
-
- // Rotation
- tempv3[0] = temptransv3[0] * cos(alpha1) + temptransv3[1] * sin(alpha1);
- tempv3[1] = temptransv3[1] * cos(alpha1) - temptransv3[0] * sin(alpha1);
- tempv4[0] = temptransv4[0] * cos(alpha1) + temptransv4[1] * sin(alpha1);
- tempv4[1] = temptransv4[1] * cos(alpha1) - temptransv4[0] * sin(alpha1);
-
- otbMsgDevMacro(<< "tempv1[0], tempv1[1], tempv2[0], tempv2[1]: " );
- otbMsgDevMacro(<< tempv1[0] << ", " << tempv1[1] << ", " << tempv2[0] << ", " << tempv2[1] );
- otbMsgDevMacro(<< "Alpha: " << alpha1 );
- otbMsgDevMacro(<< "tempv3[0], tempv3[1], tempv4[0], tempv4[1]: "
- << tempv3[0] << ", " << tempv3[1] << ", "
- << tempv4[0] << ", " << tempv4[1] );
- otbMsgDevMacro(<< "Calculated length of the second line: "
- << sqrt(pow((tempv4[0] - tempv3[0]), 2) + pow((tempv4[1] - tempv3[1]), 2)) );
- otbMsgDevMacro(<< "Original length of line 1: " << length12 );
- }
- }
-
- if (v2[1] < v1[1])
- {
-
- if (v1[0] == v2[0])
- {
- tempv2[0] = 0., tempv2[1] = 0.;
- tempv1[0] = 0., tempv1[1] = length12;
- tempv3[0] = v3[0] - v2[0], tempv3[1] = v3[1] - v2[1];
- tempv4[0] = v4[0] - v2[0], tempv4[1] = v4[1] - v2[1];
- }
- else
- {
- tempv1[0] = 0.;
- tempv1[1] = 0.;
- tempv2[0] = 0.;
- tempv2[1] = length12;
-
- // Rotate the system clockwise
- double sinealpha;
- if (v2[0] > v1[0])
- {
- sinealpha = (v2[0] - v1[0]) / length12;
- }
- else
- {
- sinealpha = (v1[0] - v2[0]) / length12;
- }
-
- double alpha1 = std::asin(sinealpha);
-
- // Translation
- temptransv3[0] = v3[0] - v2[0];
- temptransv3[1] = v3[1] - v2[1];
- temptransv4[0] = v4[0] - v2[0];
- temptransv4[1] = v4[1] - v2[1];
-
- // Rotation
- tempv3[0] = temptransv3[0] * cos(alpha1) + temptransv3[1] * sin(alpha1);
- tempv3[1] = temptransv3[1] * cos(alpha1) - temptransv3[0] * sin(alpha1);
- tempv4[0] = temptransv4[0] * cos(alpha1) + temptransv4[1] * sin(alpha1);
- tempv4[1] = temptransv4[1] * cos(alpha1) - temptransv4[0] * sin(alpha1);
-
- otbMsgDevMacro( << "tempv1[0], tempv1[1], tempv2[0], tempv2[1]: " );
- otbMsgDevMacro( << tempv1[0] << ", " << tempv1[1] << ", " << tempv2[0] << ", " << tempv2[1] );
- otbMsgDevMacro( << "Alpha: " << alpha1 );
- otbMsgDevMacro( << "tempv3[0], tempv3[1], tempv4[0], tempv4[1]: "
- << tempv3[0] << ", " << tempv3[1] << ", " << tempv4[0] << ", " << tempv4[1] );
- otbMsgDevMacro( << "Calculated length of the second line: "
- << sqrt(pow((tempv4[0] - tempv3[0]), 2) + pow((tempv4[1] - tempv3[1]), 2)) );
- otbMsgDevMacro( << "Original length of line 1: " << length12 );
- }
- }
-
- // Compute the length of the overlapping part
- // of the two lines. This is done by simply
- // comparing the y-values of the lines (remember
- // that both lines are parallel and also parallel
- // to the new y-axis).
- double commonDist = 0.;
-
- if (tempv3[1] >= tempv4[1])
- {
- if (tempv3[1] >= 0 && tempv3[1] <= tempv2[1])
- {
- if (tempv4[1] >= 0)
- {
- commonDist = std::abs(tempv4[1] - tempv3[1]);
- }
-
- else if (tempv4[1] < 0)
- {
- commonDist = tempv3[1];
- }
- }
- else if (tempv3[1] >= 0 && tempv3[1] >= tempv2[1])
- {
- if (tempv4[1] >= 0)
- {
- commonDist = tempv2[1] - tempv4[1];
- }
-
- else if (tempv4[1] < 0)
- {
- commonDist = tempv2[1];
- }
-
- }
- else if (tempv4[1] >= tempv2[1])
- { // No overlapping parts exist. The (negative) distance
- // between the two closest endpoints is calculated.
- commonDist = -std::abs(tempv4[1] - tempv2[1]);
- }
- else if (tempv3[1] < 0)
- { // No overlapping parts exist. The (negative) distance
- // between the two closest endpoints is calculated.
- commonDist = tempv3[1];
- }
- }
-
- else
- {
- if (tempv4[1] >= 0 && tempv4[1] <= tempv2[1])
- {
- if (tempv3[1] >= 0)
- {
- commonDist = std::abs(tempv3[1] - tempv4[1]);
- }
-
- else if (tempv3[1] < 0)
- {
- commonDist = tempv4[1];
- }
- }
- else if (tempv4[1] >= 0 && tempv4[1] >= tempv2[1])
- {
- if (tempv3[1] >= 0)
- {
- commonDist = tempv2[1] - tempv3[1];
- }
-
- else if (tempv3[1] < 0)
- {
- commonDist = tempv2[1];
- }
-
- }
- else if (tempv3[1] >= tempv2[1])
- { // No overlapping parts exist. The (negative) distance
- // between the two closest endpoints is calculated.
- commonDist = -std::abs(tempv3[1] - tempv2[1]);
- }
- else if (tempv4[1] < 0)
- { // No overlapping parts exist. The (negative) distance
- // between the two closest endpoints is calculated.
- commonDist = tempv4[1];
- }
- }
- // The common parallel parts of the two lines have to be greater than
- // the provided threshold.
- otbMsgDevMacro( << "Calculated common distance of the parallel lines: " << commonDist );
- bool common = (commonDist >= static_cast<double>(m_CommonDistanceThreshold));
-
- return common;
-}
-
-/**
- * Write parallel line in a new path list.
- * p1: First parallel path (line segment)
- */
-template <class TPath>
-typename ParallelLinePathListFilter<TPath>
-::PathPointerType
-ParallelLinePathListFilter<TPath>
-::WriteParallelPath(PathPointerType p1)
-{
- PathPointerType resp = PathType::New();
-
- VertexIteratorType it;
-
- for (it = p1->GetVertexList()->Begin(); it != p1->GetVertexList()->End(); ++it)
- {
- resp->AddVertex((it).Value());
- }
-
- return resp;
-}
-
-/**
- * PrintSelf Method
- */
-template <class TPath>
-void
-ParallelLinePathListFilter<TPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbRemoveIsolatedByDirectionFilter.h b/Modules/Detection/RoadExtraction/include/otbRemoveIsolatedByDirectionFilter.h
deleted file mode 100644
index cc60ea4b97a1a93fbf256effb390d614bb4e7a82..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbRemoveIsolatedByDirectionFilter.h
+++ /dev/null
@@ -1,134 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRemoveIsolatedByDirectionFilter_h
-#define otbRemoveIsolatedByDirectionFilter_h
-
-#include "otbModulusAndDirectionImageToImageFilter.h"
-#include "otbBinaryFunctorNeighborhoodImageFilter.h"
-
-namespace otb
-{
-namespace Functor
-{
-/** \class RemoveIsolatedByDirectionFunctor
- * \brief Binary neighborhood functor to remove isolated pixels by direction.
- * Used by the RemoveIsolatedByDirectionFilter.
- * \sa RemoveIsolatedByDirectionFilter
- * \ingroup Functor
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInput1, class TInput2, class TOutput>
-class RemoveIsolatedByDirectionFunctor
-{
-public:
- RemoveIsolatedByDirectionFunctor() {}
- virtual ~RemoveIsolatedByDirectionFunctor() {}
- inline TOutput operator ()(const TInput1& itA, const TInput2& itB)
- {
- double currentDirection = itB.GetCenterPixel();
- int nEqualNeighbors = 0;
- for (int neighborhoodIndex = 0; neighborhoodIndex < 9; ++neighborhoodIndex)
- {
- if (itB.GetPixel(neighborhoodIndex) == currentDirection)
- {
- ++nEqualNeighbors;
- }
- }
- if (nEqualNeighbors <= 1)
- {
- //should never be 0 as it is at least equal to itself
- return 0;
- }
- else
- {
- return static_cast<TOutput>(itA.GetCenterPixel());
- }
- }
-};
-}
-/** \class RemoveIsolatedByDirectionFilter
- * \brief This filter removes (sets to null intensity) pixels isolated by direction.
- *
- * For a given pixel, the filter walk through its neighborhood in direction image, counting pixels having
- * the same direction as the center pixel. If there is no such a pixel, the center pixel is considered to be
- * isolated in direction, and thus will be removed (set to 0). If the pixel is not isolated in direction, the output
- * value is the value of the pixel in the modulus image.
- * Of course this filter requires the direction to be discrete, in order to be able to count the directions.
- *
- * \ingroup Streamed
- * \ingroup Threaded
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputModulus, class TInputDirection, class TOutputImage>
-class ITK_EXPORT RemoveIsolatedByDirectionFilter
- : public ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef RemoveIsolatedByDirectionFilter Self;
- typedef ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(RemoveIsolatedByDirectionFilter, ModulusAndDirectionImageToImageFilter);
-
- /** typedef of the computing filter (this allows us to derive from ModulusAndDirectionToImageFilter as well as
- using the BinaryFunctorNeighBorhoodImageFilter, which is appropriate here */
- typedef Functor::RemoveIsolatedByDirectionFunctor<
- typename itk::ConstNeighborhoodIterator<TInputModulus>,
- typename itk::ConstNeighborhoodIterator<TInputDirection>,
- typename TOutputImage::PixelType> FunctorType;
- typedef otb::BinaryFunctorNeighborhoodImageFilter<TInputModulus, TInputDirection, TOutputImage,
- FunctorType> ComputingFilterType;
-
-protected:
- /** Constructor */
- RemoveIsolatedByDirectionFilter() {};
- /** Destructor */
- ~RemoveIsolatedByDirectionFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override
- {
- Superclass::PrintSelf(os, indent);
- }
- /** Main computation method */
- void GenerateData(void) override
- {
- typename ComputingFilterType::Pointer filter = ComputingFilterType::New();
- filter->SetInput1(this->GetInput());
- filter->SetInput2(this->GetInputDirection());
- filter->GraftOutput(this->GetOutput());
- filter->Update();
- this->GraftOutput(filter->GetOutput());
- }
-
-private:
- RemoveIsolatedByDirectionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbRemoveTortuousPathListFilter.h b/Modules/Detection/RoadExtraction/include/otbRemoveTortuousPathListFilter.h
deleted file mode 100644
index abe69a7b58a8664696e69c5832a6e05102085dea..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbRemoveTortuousPathListFilter.h
+++ /dev/null
@@ -1,67 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRemoveTortuousPathListFilter_h
-#define otbRemoveTortuousPathListFilter_h
-
-#include "otbUnaryFunctorObjectListBooleanFilter.h"
-#include "otbPathMeanDistanceFunctor.h"
-#include "otbObjectList.h"
-
-namespace otb
-{
-/** \class RemoveTortuousPathListFilter
- * \brief This filter remove path considered as tortuous.
- *
- * A path is considered to be tortuous if the mean distance between each consecutive vertices
- * is strictly lower than the user provided threshold.
- *
- * This class is just a shortcut to the UnaryFunctorObjectListBooleanFilter with
- * the PathMeanDistanceFunctor.
- *
- *<b>Recent API changes:</b>
- * Now part of the UnaryFunctorObjectListBooleanFilter hierarchy, replace call to SetMeanDistanceThreshold()
- * by GetFunctor().SetThreshold().
- *
- * The inequality is now a strict one.
- *
- * \sa BreakAngularPathListFilter
- * \sa SimplifyPathFilter
- * \sa UnaryFunctorObjectListBooleanFilter
- * \sa PathMeanDistanceFunctor
- *
- * \example FeatureExtraction/ExtractRoadByStepsExample.cxx
- *
- *
- * \ingroup OTBRoadExtraction
- */
-
-// template <class TPath>
-template <class TPath>
-class ITK_EXPORT RemoveTortuousPathListFilter :
- public UnaryFunctorObjectListBooleanFilter<
- ObjectList<TPath>,
- ObjectList<TPath>,
- PathMeanDistanceFunctor<typename TPath::Pointer> >
-{};
-
-} // End namespace otb
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbRemoveWrongDirectionFilter.h b/Modules/Detection/RoadExtraction/include/otbRemoveWrongDirectionFilter.h
deleted file mode 100644
index b0d4fffb991f383be9bbec4f9a51c187e16ab0c6..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbRemoveWrongDirectionFilter.h
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRemoveWrongDirectionFilter_h
-#define otbRemoveWrongDirectionFilter_h
-
-#include "otbModulusAndDirectionImageToImageFilter.h"
-#include "itkBinaryFunctorImageFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-namespace Functor
-{
-/** \class RemoveWrongDirectionFunctor
- * \brief This functor is used by the RemoveWrongDirectionFilter
- *
- * \sa RemoveWrongDirectionFilter
- * \ingroup Functor
- *
- * \example FeatureExtraction/ExtractRoadByStepsExample.cxx
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInput1, class TInput2, class TOutput>
-class RemoveWrongDirectionFunctor
-{
-public:
- RemoveWrongDirectionFunctor() {}
- virtual ~RemoveWrongDirectionFunctor() {}
- inline TOutput operator ()(const TInput1& A, const TInput2& B)
- {
- if (B < CONST_PI_8)
- {
- return 0;
- }
- else
- {
- return A;
- }
- }
-};
-}
-/** \class RemoveWrongDirectionFilter
- * \brief This filter removes (sets to null intensity) pixels with wrong direction.
- *
- * This filter is part of the road extraction framework. By using the Spectral Angle filter,
- * we can assume that the direction of a road on our scalar product image is positive (greater
- * than \f$ \pi/8 \f$).
- * Therefore in the input modulus and direction images, pixels whose direction is lower than
- * this threshold are suppressed
- * (in fact, their intensity is set to 0).
- *
- * \sa NeighborhoodScalarProductFilter
- * \ingroup Streamed
- * \ingroup Threaded
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputModulus, class TInputDirection, class TOutputImage>
-class ITK_EXPORT RemoveWrongDirectionFilter
- : public ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef RemoveWrongDirectionFilter Self;
- typedef ModulusAndDirectionImageToImageFilter<TInputModulus, TInputDirection, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(RemoveWrongDirectionFilter, ModulusAndDirectionImageToImageFilter);
-
- /** typedef of the computing filter (this allows us to derive from ModulusAndDirectionToImageFilter as well as
- using the BinaryFunctorImageFilter, which is appropriate here */
- typedef Functor::RemoveWrongDirectionFunctor<
- typename TInputModulus::PixelType,
- typename TInputDirection::PixelType,
- typename TOutputImage::PixelType> FunctorType;
- typedef itk::BinaryFunctorImageFilter<TInputModulus, TInputDirection, TOutputImage, FunctorType> ComputingFilterType;
-
-protected:
- /** Constructor */
- RemoveWrongDirectionFilter() {};
- /** Destructor */
- ~RemoveWrongDirectionFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override
- {
- Superclass::PrintSelf(os, indent);
- }
- /** Main computation method */
- void GenerateData(void) override
- {
- typename ComputingFilterType::Pointer filter = ComputingFilterType::New();
- filter->SetInput1(this->GetInput());
- filter->SetInput2(this->GetInputDirection());
- filter->GraftOutput(this->GetOutput());
- filter->Update();
- this->GraftOutput(filter->GetOutput());
- }
-
-private:
- RemoveWrongDirectionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.h b/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.h
deleted file mode 100644
index 77c19f0ca336f0300b9d1349bed6951d2608467a..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.h
+++ /dev/null
@@ -1,171 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRoadExtractionFilter_h
-#define otbRoadExtractionFilter_h
-
-
-#include "otbSpectralAngleDistanceImageFilter.h"
-#include "otbGenericRoadExtractionFilter.h"
-
-namespace otb
-{
-/**
- * \class RoadExtractionFilter
- * \brief This class performs the extraction of roads from an image.
- *
- * This composite filter implements a fast and robust road extraction
- * for high resolution satellite images. This is a composite filter using the
- * SpectralAngleDistanceImageFilter and the GenericRoadExtractionFilter and is
- * intended to be used with optical high resolution data. The full method is
- * described in E. Christophe and J. Inglada, "Robust Road Extraction for High
- * Resolution Satellite Images," in IEEE International Conference on
- * Image Processing, ICIP 2007.
- *
- * The algorithm uses all spectral
- * bands based on the spectral angle with a reference pixel. Then, the line
- * detection is done using a Gaussian gradient with a scalar product to find
- * the road directions. Finally, extracted roads are vectorized and
- * processed to improve the results removing some occultations and false
- * detections.
- *
- * This filter is fast, as the detection typically takes 3 seconds for a
- * 1000 \f$ \times \f$ 1000 images with four spectral bands. Results can be
- * used as an initialization for more complex algorithms.
- *
- * \sa SpectralAngleDistanceImageFilter
- * \sa GenericRoadExtractionFilter
- *
- * \example FeatureExtraction/ExtractRoadExample.cxx
- *
- *
- * \ingroup OTBRoadExtraction
- */
-template <class TInputImage, class TOutputPath>
-class ITK_EXPORT RoadExtractionFilter
- : public ImageToPathListFilter<TInputImage, TOutputPath>
-{
-public:
- /** Standard typedefs */
- typedef RoadExtractionFilter Self;
- typedef ImageToPathListFilter<TInputImage, TOutputPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(RoadExtractionFilter, ImageToPathListFilter);
- /** Template parameters typedefs */
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::OutputPathType OutputPathType;
- typedef typename Superclass::OutputPathListType OutputPathListType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef double InternalPixelType;
-
- typedef otb::VectorImage<InternalPixelType, InputImageType::ImageDimension> VectorImageType;
- typedef otb::Image<InternalPixelType, InputImageType::ImageDimension> SpectralAngleType;
- typedef otb::Image<InternalPixelType, InputImageType::ImageDimension> ModulusType;
- typedef otb::Image<InternalPixelType, InputImageType::ImageDimension> DirectionType;
-
- typedef itk::CovariantVector<InternalPixelType, InputImageType::ImageDimension>
- VectorPixelType;
- typedef otb::Image<VectorPixelType, InputImageType::ImageDimension> CovariantVectorImageType;
-
- /* Template parameters typedefs for composites filters */
- typedef SpectralAngleDistanceImageFilter<
- InputImageType,
- SpectralAngleType> SpectralAngleDistanceImageFilterType;
-
- typedef GenericRoadExtractionFilter<SpectralAngleType, OutputPathType>
- GenericRoadExtractionFilterType;
-
- /** Template parameters typedefs for internals filters */
- typedef typename GenericRoadExtractionFilterType::SigmaType SigmaType;
- typedef typename GenericRoadExtractionFilterType::AmplitudeThresholdType AmplitudeThresholdType;
- typedef typename GenericRoadExtractionFilterType::ToleranceType ToleranceType;
- typedef typename GenericRoadExtractionFilterType::MaxAngleType MaxAngleType;
- typedef typename GenericRoadExtractionFilterType::MeanDistanceThresholdType MeanDistanceThresholdType;
- typedef typename GenericRoadExtractionFilterType::LinkRealType LinkRealType;
-
- /** Get/Set the reference pixel (use by the SpectralAngleDistanceImageFilter)*/
- otbGetObjectMemberConstReferenceMacro(SpectralAngleDistanceImageFilter, ReferencePixel, InputPixelType);
- otbSetObjectMemberMacro(SpectralAngleDistanceImageFilter, ReferencePixel, InputPixelType);
-
- /** Get/Set the alpha value */
- otbGetObjectMemberConstReferenceMacro(GenericRoadExtractionFilter, Alpha, double);
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, Alpha, double);
-
- /** Get/Set the amplitude threshold to start following a path (use by the VectorizationPathListFilter)*/
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, AmplitudeThreshold, AmplitudeThresholdType);
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, AmplitudeThreshold, AmplitudeThresholdType);
-
- /** Get/Set the tolerance for segment consistency (tolerance in terms of distance) (use by the SimplifyPathListFilter)*/
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, Tolerance, ToleranceType);
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, Tolerance, ToleranceType);
-
- /** Set/Get the max angle (use bye the BreakAngularPathListFilter)*/
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, MaxAngle, MaxAngleType);
- otbGetObjectMemberConstMacro(GenericRoadExtractionFilter, MaxAngle, MaxAngleType);
-
- /** Get/Set the tolerance for segment consistency (tolerance in terms of distance) (use by RemoveTortuousPathListFilter)*/
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, FirstMeanDistanceThreshold, MeanDistanceThresholdType);
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, FirstMeanDistanceThreshold, MeanDistanceThresholdType);
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, SecondMeanDistanceThreshold, MeanDistanceThresholdType);
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, SecondMeanDistanceThreshold, MeanDistanceThresholdType);
-
- /** Get/Set the angular threshold (use by LinkPathFilter)*/
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, AngularThreshold, LinkRealType);
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, AngularThreshold, LinkRealType);
- /** Get/Set the distance threshold (use by LinkPathFilter)*/
- otbSetObjectMemberMacro(GenericRoadExtractionFilter, DistanceThreshold, LinkRealType);
- otbGetObjectMemberMacro(GenericRoadExtractionFilter, DistanceThreshold, LinkRealType);
-
-protected:
- /** Constructor */
- RoadExtractionFilter();
- /** Destructor */
- ~RoadExtractionFilter() override {}
-
- /** Prepare main computation method */
- void BeforeGenerateData(void);
-
- /** Main computation method */
- void GenerateData(void) override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
-
- RoadExtractionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /** SpectralAngleDistanceImageFilter use by the composite filter */
- typename SpectralAngleDistanceImageFilterType::Pointer m_SpectralAngleDistanceImageFilter;
- typename GenericRoadExtractionFilterType::Pointer m_GenericRoadExtractionFilter;
-
-};
-
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRoadExtractionFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.hxx b/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.hxx
deleted file mode 100644
index 67ee3a9fbbc7bce8f6aa09f2a87f88995a9e1613..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbRoadExtractionFilter.hxx
+++ /dev/null
@@ -1,82 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRoadExtractionFilter_hxx
-#define otbRoadExtractionFilter_hxx
-
-#include "otbRoadExtractionFilter.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputPath>
-RoadExtractionFilter<TInputImage, TOutputPath>
-::RoadExtractionFilter()
-{
- this->SetNumberOfRequiredInputs(1);
- this->SetNumberOfRequiredOutputs(1);
-
- m_SpectralAngleDistanceImageFilter = SpectralAngleDistanceImageFilterType::New();
- m_GenericRoadExtractionFilter = GenericRoadExtractionFilterType::New();
-
-}
-
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputPath>
-void
-RoadExtractionFilter<TInputImage, TOutputPath>
-::GenerateData()
-{
- // Input images pointers
- typename InputImageType::ConstPointer inputImage = this->GetInput();
- typename OutputPathListType::Pointer outputPathList = this->GetOutput();
-
- m_SpectralAngleDistanceImageFilter->SetInput(inputImage);
-
- m_GenericRoadExtractionFilter->SetInput(m_SpectralAngleDistanceImageFilter->GetOutput());
-
- m_GenericRoadExtractionFilter->Update();
- for (typename GenericRoadExtractionFilterType::OutputPathListType::ConstIterator it
- = m_GenericRoadExtractionFilter->GetOutput()->Begin();
- it != m_GenericRoadExtractionFilter->GetOutput()->End();
- ++it)
- {
- outputPathList->PushBack(it.Get());
- }
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputPath>
-void
-RoadExtractionFilter<TInputImage, TOutputPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "m_ReferencePixel: " << m_SpectralAngleDistanceImageFilter->GetReferencePixel() << std::endl;
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbSimplifyPathListFilter.h b/Modules/Detection/RoadExtraction/include/otbSimplifyPathListFilter.h
deleted file mode 100644
index 2c0f99fad114390d0c5517ddad580fc5da6f43b0..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbSimplifyPathListFilter.h
+++ /dev/null
@@ -1,77 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbSimplifyPathListFilter_h
-#define otbSimplifyPathListFilter_h
-
-#include "otbUnaryFunctorObjectListFilter.h"
-#include "otbSimplifyPathFunctor.h"
-#include "otbObjectList.h"
-
-namespace otb
-{
-/** \class SimplifyPathListFilter
- * \brief This filter performs a simplification of the path in the input list.
- *
- * It reduces the number of vertices in each path, according to a tolerance criterion. It aims at
- * removing aligned vertices while keeping sharp angular points.
- *
- * In order to ensure the unicity of its output, each path is considered first from begin to end, then
- * from begin to the first vertex before the end. At each step, the consistency of the path is checked :
- * the equation of the line passing by the first and last vertices is computed. Then, for each
- * vertices between them, the euclidean distance to this line is computed. If for one vertex, this distance
- * is upper than the tolerance threshold, the path is considered to be inconsistent and no vertices can be removed.
- *
- * If the path is considered consistent (which will occur at least with a 2 vertices path),
- * only the beginning and ending
- * vertices are kept and a new search iteration begin at its end.
- *
- * This filter is part of the road extraction framework.
- *
- * This class is just a shortcut to the UnaryFunctorObjectListFilter with
- * the SimplifyPathFunctor.
- *
- * <b>Recent API changes:</b>
- * Now part of the UnaryFunctorObjectListFilter hierarchy, replace call to SetTolerance()
- * by GetFunctor().SetTolerance().
- *
- *
- * \sa BreakAngularPathListFilter
- * \sa RemoveTortuousPathFilter.
- * \sa UnaryFunctorObjectListFilter
- * \sa SimplifyPathFunctor
- *
- * \example FeatureExtraction/ExtractRoadByStepsExample.cxx
- *
- *
- * \ingroup OTBRoadExtraction
- */
-
-template <class TPath>
-class ITK_EXPORT SimplifyPathListFilter :
- public UnaryFunctorObjectListFilter<
- ObjectList<TPath>,
- ObjectList<TPath>,
- SimplifyPathFunctor<TPath, TPath> >
-{};
-
-} // End namespace otb
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.h b/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.h
deleted file mode 100644
index 476725d3af8d4261353de5e8a2b61165305d9873..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.h
+++ /dev/null
@@ -1,142 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorDataToRoadDescriptionFilter_h
-#define otbVectorDataToRoadDescriptionFilter_h
-
-#include "otbVectorDataToSpecificDescriptionFilterBase.h"
-#include "otbVectorData.h"
-
-//#include "otbNDVIDataNodeFeatureFunction.h"
-//#include "otbSpectralAngleDataNodeFeatureFunction.h"
-#include "otbParserConditionDataNodeFeatureFunction.h"
-#include "otbDBOverlapDataNodeFeatureFunction.h"
-
-namespace otb
-{
-/** \class VectorDataToRoadDescriptionFilter
- * \brief VectorDataToRoadDescriptionFilter associates a score to each
- * adapted input VectorData DataNode.
- *
- * VectorDataToRoadDescriptionFilter is dedicated to road description.
- * Input and output are both VectorDatas in index coordinate.
- * Each DataNode of the output VectorData contains its scores
- * regarding to the associated descriptors.
- * The support is an Optical Image and the descriptor are:
- * - (NDVI >= threshold) per cent along the tested lines
- * - mean Spectral Angle regarding a reference pixel along the tested lines
- * - DB Overlap compute the number of building crossed by the data node in percent
- * regarding all the buildings within a data node neighborhood
- *
- * \ingroup VectorDataFilter
- * \sa VectorDataToSpecificDescriptionFilterBase
- * \sa VectorDataToBuildingDescriptionFilter
- *
- * \ingroup OTBRoadExtraction
- */
-
-template <class TVectorData, class TOpticalImage>
-class ITK_EXPORT VectorDataToRoadDescriptionFilter :
-public otb::VectorDataToSpecificDescriptionFilterBase<TVectorData>
-{
-public:
- /** Standard class typedefs. */
- typedef VectorDataToRoadDescriptionFilter Self;
- typedef otb::VectorDataToSpecificDescriptionFilterBase<TVectorData>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(VectorDataToRoadDescriptionFilter, VectorDataToSpecificDescriptionFilterBase);
-
- /** Some typedefs. */
- typedef TVectorData VectorDataType;
- typedef typename TVectorData::Pointer VectorDataPointer;
- typedef typename VectorDataType::DataNodeType DataNodeType;
- typedef itk::PreOrderTreeIterator<typename VectorDataType::DataTreeType>
- TreeIteratorType;
- typedef typename DataNodeType::ValuePrecisionType
- PrecisionType;
- typedef typename DataNodeType::PrecisionType
- CoordRepType;
-
- typedef TOpticalImage OpticalImageType;
- typedef typename TOpticalImage::Pointer OpticalImageTypePointer;
-
- typedef std::vector<std::string> DescriptorsListType;
-
- /*
- typedef otb::NDVIDataNodeFeatureFunction<OpticalImageType, CoordRepType, PrecisionType>
- NDVIFeatureFunctionType;
- typedef otb::SpectralAngleDataNodeFeatureFunction<OpticalImageType, CoordRepType, PrecisionType>
- SpectralAngleFeatureFunctionType;
- */
- typedef otb::ParserConditionDataNodeFeatureFunction<OpticalImageType, CoordRepType, PrecisionType>
- ParserConditionFeatureFunctionType;
-
- typedef otb::DBOverlapDataNodeFeatureFunction<CoordRepType, PrecisionType>
- DBOverlapFeatureFunctionType;
-
- typedef itk::DataObject::Pointer DataObjectPointer;
- typedef itk::DataObject DataObject;
-
- virtual void AddOpticalImage(const OpticalImageType * support);
- const OpticalImageType * GetOpticalImage();
-
- virtual void AddBuildingsDB(const VectorDataType * support);
- const VectorDataType * GetBuildingsDB();
-
- const DescriptorsListType& GetDescriptorsList() const
- {
- return m_DescriptorsList;
- }
-
-protected:
- /** Constructor */
- VectorDataToRoadDescriptionFilter();
- /** Destructor */
- ~VectorDataToRoadDescriptionFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Triggers the Computation of the Descriptors */
- void GenerateData(void) override;
-
-private:
- VectorDataToRoadDescriptionFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- typename ParserConditionFeatureFunctionType::Pointer m_NDVIFeatureFunction;
- typename ParserConditionFeatureFunctionType::Pointer m_SpectralAngleFeatureFunction;
- typename DBOverlapFeatureFunctionType::Pointer m_DBOverlapFeatureFunction;
- DescriptorsListType m_DescriptorsList;
-
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbVectorDataToRoadDescriptionFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.hxx b/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.hxx
deleted file mode 100644
index e58488f53621c3e3423510e7b750bd7c4cee54ca..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/include/otbVectorDataToRoadDescriptionFilter.hxx
+++ /dev/null
@@ -1,145 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorDataToRoadDescriptionFilter_hxx
-#define otbVectorDataToRoadDescriptionFilter_hxx
-
-#include "otbVectorDataToRoadDescriptionFilter.h"
-
-namespace otb
-{
-
-// Constructor
-template <class TVectorData, class TOpticalImage>
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::VectorDataToRoadDescriptionFilter()
-{
- this->SetNumberOfRequiredInputs(3);
-
- m_NDVIFeatureFunction = ParserConditionFeatureFunctionType::New();
- m_NDVIFeatureFunction->SetExpression("ndvi(b3, b4) > 0.4");
-
- m_SpectralAngleFeatureFunction = ParserConditionFeatureFunctionType::New();
- m_SpectralAngleFeatureFunction->SetExpression("spectralAngle > 0.25");
-
- //Example for QuickBird images (on a specific image)
- typename ParserConditionFeatureFunctionType::PixelType refPixel;
- refPixel.SetSize(4);
- refPixel[0] = 252;
- refPixel[1] = 357;
- refPixel[2] = 232;
- refPixel[3] = 261;
- m_SpectralAngleFeatureFunction->SetSpectralAngleReferencePixel(refPixel);
-
- m_DBOverlapFeatureFunction = DBOverlapFeatureFunctionType::New();
-
- m_DescriptorsList.push_back("NONDVI");
- m_DescriptorsList.push_back("ROADSA");
- m_DescriptorsList.push_back("NOBUIL");
-}
-
-template <class TVectorData, class TOpticalImage>
-void
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::AddOpticalImage(const OpticalImageType * support)
-{
- this->AddSupport(const_cast<OpticalImageType *>(support), 0);
-}
-
-template <class TVectorData, class TOpticalImage>
-const typename VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::OpticalImageType *
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::GetOpticalImage()
-{
- return static_cast<const OpticalImageType *>
- (this->GetSupport(0));
-}
-
-
-template <class TVectorData, class TOpticalImage>
-void
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::AddBuildingsDB(const VectorDataType * support)
-{
- this->AddSupport(const_cast<VectorDataType *>(support), 1);
-}
-
-template <class TVectorData, class TOpticalImage>
-const typename VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::VectorDataType *
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::GetBuildingsDB()
-{
- return static_cast<const VectorDataType *>
- (this->GetSupport(1));
-}
-
-template <class TVectorData, class TOpticalImage>
-void
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::GenerateData()
-{
- m_NDVIFeatureFunction->SetInputImage(const_cast<OpticalImageType *>(this->GetOpticalImage()));
- m_SpectralAngleFeatureFunction->SetInputImage(const_cast<OpticalImageType *>(this->GetOpticalImage()));
- m_DBOverlapFeatureFunction->SetInputVectorData(const_cast<VectorDataType *>(this->GetBuildingsDB()));
-
- // Retrieving root node
- typename DataNodeType::Pointer root = this->GetOutput(0)->GetDataTree()->GetRoot()->Get();
- // Create the document node
- typename DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- this->GetOutput(0)->GetDataTree()->Add(document, root);
- // Create the folder node
- typename DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- this->GetOutput(0)->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(this->GetInput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (!itVector.Get()->IsRoot() && !itVector.Get()->IsDocument() && !itVector.Get()->IsFolder())
- {
- typename DataNodeType::Pointer currentGeometry = itVector.Get();
- currentGeometry->SetFieldAsDouble("NONDVI", (double)(m_NDVIFeatureFunction->Evaluate(*(currentGeometry.GetPointer()))[0]));
- currentGeometry->SetFieldAsDouble("ROADSA", (double)(m_SpectralAngleFeatureFunction->Evaluate(*(currentGeometry.GetPointer()))[0]));
- currentGeometry->SetFieldAsDouble("NOBUIL", (double)(m_DBOverlapFeatureFunction->Evaluate(*(currentGeometry.GetPointer()))[0]));
-
- this->GetOutput(0)->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-}
-
-// PrintSelf Method
-template <class TVectorData, class TOpticalImage>
-void
-VectorDataToRoadDescriptionFilter<TVectorData, TOpticalImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/RoadExtraction/otb-module.cmake b/Modules/Detection/RoadExtraction/otb-module.cmake
deleted file mode 100644
index 0af2a5ba034b1c7a2444e4e744eac1921589de45..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/otb-module.cmake
+++ /dev/null
@@ -1,43 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "Everything users need to extract roads.")
-
-otb_module(OTBRoadExtraction
- DEPENDS
- OTBVectorDataBase
- OTBITK
- OTBImageBase
- OTBVectorDataManipulation
- OTBImageManipulation
- OTBMathParser
- OTBPath
- OTBObjectList
- OTBCommon
-
- TEST_DEPENDS
- OTBTestKernel
- OTBImageIO
- OTBProjection
- OTBVectorDataIO
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Detection/RoadExtraction/test/AlignementsQB.cxx b/Modules/Detection/RoadExtraction/test/AlignementsQB.cxx
deleted file mode 100644
index 2188101cb207bdb24ff483f41d4fa3a71cbddd6e..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/AlignementsQB.cxx
+++ /dev/null
@@ -1,142 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#include <iostream>
-#include "itkPolyLineParametricPath.h"
-
-#include "otbImageFileWriter.h"
-#include "otbImageFileReader.h"
-#include "otbExtractROI.h"
-#include "otbImageToPathListAlignFilter.h"
-#include "otbDrawPathFilter.h"
-//#include "otbColorImageViewer.h"
-
-#include <stdio.h>
-
-int main(int argc, char ** argv)
-{
- if (argc != 3)
- {
-
- std::cout << "Usage : " << argv[0] << " inputImage outputImage" << std::endl;
- return 1;
-
- }
-
- const char * inputFilename = argv[1];
- const char * outputFilename = argv[2];
-
- typedef unsigned char InputPixelType;
- typedef unsigned char OutputPixelType;
-
- const unsigned int Dimension = 2;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
-
- reader->SetFileName(inputFilename);
- writer->SetFileName(outputFilename);
-
- reader->Update();
-
- std::cout << "Lecture terminee" << std::endl;
-
- typedef otb::ExtractROI<InputPixelType, InputPixelType> ROIFilterType;
-
- ROIFilterType::Pointer roiFilter = ROIFilterType::New();
-
- roiFilter->SetInput(reader->GetOutput());
- roiFilter->SetStartX(10);
- roiFilter->SetStartY(0);
- roiFilter->SetSizeX(256);
- roiFilter->SetSizeY(256);
-
- roiFilter->Update();
-
- std::cout << "Extraction ROI" << std::endl;
-
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::ImageToPathListAlignFilter<InputImageType, PathType> ListAlignFilterType;
-
- ListAlignFilterType::Pointer alignFilter = ListAlignFilterType::New();
-
- alignFilter->SetInput(roiFilter->GetOutput());
-
- alignFilter->Update();
-
- std::cout << "Alignements termines" << std::endl;
-
- typedef ROIFilterType::OutputImageType BackgroundImageType;
-
- typedef otb::DrawPathFilter<BackgroundImageType, PathType, OutputImageType> DrawPathFilterType;
-
- DrawPathFilterType::Pointer drawPathFilter = DrawPathFilterType::New();
-
- typedef ListAlignFilterType::OutputPathListType ListType;
-
- ListType* listePaths = alignFilter->GetOutput();
-
- ListType::Iterator listIt = listePaths->Begin();
-
- BackgroundImageType::Pointer backgroundImage = roiFilter->GetOutput();
-
- roiFilter->Update();
-
- unsigned int color = 0;
-
- while (listIt != listePaths->End())
- {
-
- drawPathFilter->SetImageInput(backgroundImage);
- drawPathFilter->SetInputPath(listIt.Get());
- //drawPathFilter->SetPathValue( color );
-
- drawPathFilter->Update();
-
- backgroundImage = drawPathFilter->GetOutput();
-
- ++listIt;
- ++color;
-
- }
-
- writer->SetInput(drawPathFilter->GetOutput());
-
- writer->Update();
-
-/* typedef otb::ColorImageViewer<unsigned char, double> ViewerType;
- ViewerType viewer;
-
- viewer.SetLabel( "Input Image" );
- viewer.SetImage( drawPathFilter->GetOutput() );
-
- viewer.Show();
- Fl::run();
-*/
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/CMakeLists.txt b/Modules/Detection/RoadExtraction/test/CMakeLists.txt
deleted file mode 100644
index 8c99e4420f49ffb44aa1701a95ad0c237988a736..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/CMakeLists.txt
+++ /dev/null
@@ -1,218 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBRoadExtractionTests
-otbRoadExtractionTestDriver.cxx
-otbLikelihoodPathListFilter.cxx
-otbRemoveWrongDirectionFilter.cxx
-otbSimplifyPathListFilter.cxx
-otbAlignImageToPath.cxx
-otbNonMaxRemovalByDirectionFilter.cxx
-otbRoadExtractionFilter.cxx
-otbLinkPathListFilter.cxx
-otbRemoveTortuousPathListFilter.cxx
-otbParallelLinePathListFilter.cxx
-otbRemoveIsolatedByDirectionFilter.cxx
-otbVectorDataToRoadDescriptionFilter.cxx
-otbSimplifyManyPathListFilter.cxx
-otbNeighborhoodScalarProductFilter.cxx
-otbDrawPathAlign.cxx
-otbBreakAngularPathListFilter.cxx
-)
-
-add_executable(otbRoadExtractionTestDriver ${OTBRoadExtractionTests})
-target_link_libraries(otbRoadExtractionTestDriver ${OTBRoadExtraction-Test_LIBRARIES})
-otb_module_target_label(otbRoadExtractionTestDriver)
-
-# Tests Declaration
-
-otb_add_test(NAME feTvLikelihoodPathListFilter COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${EPSILON_3}
- ${BASELINE_FILES}/feTvLikelihoodPathOutput.txt
- ${TEMP}/feTvLikelihoodPathOutput.txt
- otbLikelihoodPathListFilter
- ${INPUTDATA}/InputForRoadDetection_NonMaxRem.raw.hdr
- ${TEMP}/feTvLikelihoodPathOutput.txt
- 157 335 204 376 |
- 21 305 35 308 77 354 85 358 |
- 73 160 126 173
- )
-
-otb_add_test(NAME feTvRemoveWrongDirectionFilter COMMAND otbRoadExtractionTestDriver
- --compare-image ${EPSILON_8}
- ${BASELINE}/feTvRemoveWrongDirectionOutput.tif
- ${TEMP}/feTvRemoveWrongDirectionOutput.tif
- otbRemoveWrongDirectionFilter
- ${INPUTDATA}/InputForRoadDetection_IsolatedRem.raw.hdr
- ${INPUTDATA}/InputForRoadDetectionScalarProductDir.raw.hdr
- ${TEMP}/feTvRemoveWrongDirectionOutput.tif
- )
-
-otb_add_test(NAME feTvSimplifyPathListFilter COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${EPSILON_3}
- ${BASELINE_FILES}/feTvSimplifyPathOutput.txt
- ${TEMP}/feTvSimplifyPathOutput.txt
- otbSimplifyPathListFilter
- ${TEMP}/feTvSimplifyPathOutput.txt
- 1.0
- 1 1 5 1 7 1 11 1 21 1 31 1 |
- 1 1 5 1 7 1 11 1 21 11 31 11 |
- 1 1 5 5 7 7 11 11 21 21 31 31 41 41 |
- 1 1 5 1 7 1 11 1 21 11 31 11 41 11 58 11 70 11
- )
-
-otb_add_test(NAME feTvAlignMV2ITK COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${EPSILON_3} ${BASELINE_FILES}/feAlign.txt
- ${TEMP}/feAlign.txt
- otbAlignImageToPath
- ${INPUTDATA}/poupees.raw.hdr
- ${TEMP}/feAlign.txt)
-
-otb_add_test(NAME feTvNonMaxRemovalByDirectionFilter COMMAND otbRoadExtractionTestDriver
- --compare-image ${EPSILON_8}
- ${BASELINE}/feTvNonMaxRemovalByDirectionOutput.tif
- ${TEMP}/feTvNonMaxRemovalByDirectionOutput.tif
- otbNonMaxRemovalByDirectionFilter
- ${INPUTDATA}/InputForRoadDetection_WrongRem.raw.hdr
- ${INPUTDATA}/InputForRoadDetectionScalarProductDir.raw.hdr
- ${TEMP}/feTvNonMaxRemovalByDirectionOutput.tif
- )
-
-otb_add_test(NAME feTvRoadExtractionFilter COMMAND otbRoadExtractionTestDriver
- --compare-image ${EPSILON_8}
- ${BASELINE}/feTvOutputRoadDetection.tif
- ${TEMP}/feTvOutputRoadDetection.tif
- otbRoadExtractionFilter
- ${INPUTDATA}/qb_RoadExtract.img.hdr
- ${TEMP}/feTvOutputRoadDetection.tif
- 337 557 432 859 # ReferencePixel
- 1.0 # Alpha
- 0.00005 # AmplitudeThreshold
- 1.0 # Tolerance
- 22.5 # (degre) MaxAngle (3.14159265358979323846/8.)
- 1.0 # FirstMeanDistanceThreshold
- 10.0 # SecondMeanDistanceThreshold
- 25. # DistanceThreshold for LinkPathFiler
- 22.5 # AngularThreshold for LinkPathFiler
- )
-
-otb_add_test(NAME feTvLinkPathListFilter COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${EPSILON_3}
- ${BASELINE_FILES}/feTvLinkPathOutput.txt
- ${TEMP}/feTvLinkPathOutput.txt
- otbLinkPathListFilter
- ${TEMP}/feTvLinkPathOutput.txt
- 30 40
- 1 1 51 1 |
- 61 1 91 1 |
- 111 11 211 11 |
- 1 51 51 51 |
- 71 71 71 91 |
- 71 131 71 201 |
- 141 111 101 111 |
- 151 111 191 111 |
- 111 71 141 71 |
- 181 71 151 71 |
- 11 131 11 101 |
- 11 171 11 141
- )
-
-otb_add_test(NAME feTvRemoveTortuousPathListFilter COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${EPSILON_3}
- ${BASELINE_FILES}/feTvRemoveTortuousPathOutput.txt
- ${TEMP}/feTvRemoveTortuousPathOutput.txt
- otbRemoveTortuousPathListFilter
- ${TEMP}/feTvRemoveTortuousPathOutput.txt
- 10.0
- 1 1 1 11 |
- 1 1 5 1 7 1 11 1 |
- 1 1 7 7 21 21 31 31 41 41 |
- 1 1 5 1 7 1 11 1 21 11 31 11 41 11 58 11 70 11
- )
-
-otb_add_test(NAME feTvParallelLinePathListFilter COMMAND otbRoadExtractionTestDriver
- otbParallelLinePathListFilter)
-
-otb_add_test(NAME feTvRemoveIsolatedByDirectionFilter COMMAND otbRoadExtractionTestDriver
- --compare-image ${EPSILON_8}
- ${BASELINE}/feTvRemoveIsolatedByDirectionOutput.tif
- ${TEMP}/feTvRemoveIsolatedByDirectionOutput.tif
- otbRemoveIsolatedByDirectionFilter
- ${INPUTDATA}/InputForRoadDetectionScalarProductMod.raw.hdr
- ${INPUTDATA}/InputForRoadDetectionScalarProductDir.raw.hdr
- ${TEMP}/feTvRemoveIsolatedByDirectionOutput.tif
- )
-
-otb_add_test(NAME fzTvVectorDataToRoadDescriptionFilter COMMAND otbRoadExtractionTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/fzTvVectorDataToRoadDescriptionFilterOutput.shp
- ${TEMP}/fzTvVectorDataToRoadDescriptionFilterOutput.shp
- otbVectorDataToRoadDescriptionFilter
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${TEMP}/fzTvVectorDataToRoadDescriptionFilterOutput.shp
- ${INPUTDATA}/DEM/srtm_directory
- 0
- )
-
-otb_add_test(NAME feTpSimplifyManyPathListFilter COMMAND otbRoadExtractionTestDriver
- otbSimplifyManyPathListFilter
- ${TEMP}/feTvSimplifyManyPathOutput.txt
- 1.0
- )
-
-otb_add_test(NAME feTvNeighborhoodScalarProductFilter COMMAND otbRoadExtractionTestDriver
- --compare-n-images ${EPSILON_6} 2
- ${BASELINE}/feTvNeighborhoodScalarProductModulusOutput.tif
- ${TEMP}/feTvNeighborhoodScalarProductModulusOutput.tif
- ${BASELINE}/feTvNeighborhoodScalarProductDirectionOutput.tif
- ${TEMP}/feTvNeighborhoodScalarProductDirectionOutput.tif
- otbNeighborhoodScalarProductFilter
- ${INPUTDATA}/InputForRoadDetection_SpectralAngle.raw.hdr
- ${TEMP}/feTvNeighborhoodScalarProductModulusOutput.tif
- ${TEMP}/feTvNeighborhoodScalarProductDirectionOutput.tif
- 1.0
- )
-
-otb_add_test(NAME feTvDrawPathTestAlign COMMAND otbRoadExtractionTestDriver
- --compare-image ${NOTOL} ${BASELINE}/feDrawPathAlignDeuxTraits.png
- ${TEMP}/feDrawPathAlignDeuxTraits.png
- otbDrawPathAlign
- ${INPUTDATA}/DeuxTraits.png
- ${TEMP}/feDrawPathAlignDeuxTraits.png)
-
-otb_add_test(NAME feTvBreakAngularPathListFilter COMMAND otbRoadExtractionTestDriver
- --compare-ascii ${NOTOL} ${BASELINE_FILES}/feBreakAngularPathListOutput.txt
- ${TEMP}/feBreakAngularPathListOutput.txt
- otbBreakAngularPathListFilter
- ${TEMP}/feBreakAngularPathListOutput.txt
- 10 20 30 50 90 140 180 |
- 1 1 5 1 7 1 11 1 21 1 31 1 |
- 1 1 5 1 7 1 11 1 21 11 31 11 |
- 1 1 5 1 7 1 11 1 21 11 31 11 41 11 |
- 1 1 5 1 7 1 11 1 21 11 31 11 41 11 58 11 70 11 |
- 1 11 5 11 7 11 11 11 21 1 31 1 41 1 |
- 1 1 5 1 7 1 11 1 21 11 31 21 41 31 |
- 1 1 5 1 5 11 5 21 |
- 1 1 31 1 41 1
- )
diff --git a/Modules/Detection/RoadExtraction/test/otbAlignImageToPath.cxx b/Modules/Detection/RoadExtraction/test/otbAlignImageToPath.cxx
deleted file mode 100644
index 567713ab741daf32e26794ade7f4be75cf9c8ffc..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbAlignImageToPath.cxx
+++ /dev/null
@@ -1,146 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-
-
-#include <iostream>
-#include "itkPolyLineParametricPath.h"
-
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImageToPathListAlignFilter.h"
-
-#include "itkPathSource.h"
-
-#include <stdio.h>
-
-int otbAlignImageToPath(int itkNotUsed(argc), char * argv[])
-{
- const char * inputFilename = argv[1];
- const char * outputFilename = argv[2];
-
- typedef double InputPixelType;
- typedef double OutputPixelType;
- const unsigned int Dimension = 2;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
-
- typedef itk::PolyLineParametricPath<Dimension> PathType;
-
- PathType::Pointer ltoto = PathType::New();
-
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
-
- typedef otb::ImageToPathListAlignFilter<InputImageType, PathType> ListAlignFilterType;
- typedef ListAlignFilterType::ValueType ValueType;
- typedef ListAlignFilterType::SizeType SizeType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- InputImageType::Pointer ImageIn = InputImageType::New();
-
- ListAlignFilterType::Pointer testList = ListAlignFilterType::New();
-
- reader->SetFileName(inputFilename);
-
- //OTB-FA-00010-CS
- testList->SetInput(reader->GetOutput());
-
- typedef ListAlignFilterType::OutputPathListType ListAlignFilterOutputPathListType;
-
- otbGenericMsgDebugMacro(<< "Before update");
- testList->Update();
- otbGenericMsgDebugMacro(<< "After update");
-
- ValueType pathValue;
- pathValue = testList->GetPathValue();
- testList->SetPathValue(pathValue);
-
- ValueType backgroundValue;
- backgroundValue = testList->GetBackgroundValue();
- testList->SetBackgroundValue(backgroundValue);
-
- SizeType size;
- size = testList->GetSize();
- testList->SetSize(size);
-
- bool isMeaningfulSegment;
- isMeaningfulSegment = testList->GetisMeaningfulSegment();
- testList->SetisMeaningfulSegment(isMeaningfulSegment);
-
- int NbGradDirection;
- NbGradDirection = testList->GetNbGradDirection();
- testList->SetNbGradDirection(NbGradDirection);
-
- int NbLineDirection;
- NbLineDirection = testList->GetNbLineDirection();
- testList->SetNbLineDirection(NbLineDirection);
-
- double MinGradNorm;
- MinGradNorm = testList->GetMinGradNorm();
- testList->SetMinGradNorm(MinGradNorm);
-
- double Eps;
- Eps = testList->GetEps();
- testList->SetEps(Eps);
-
- ListAlignFilterOutputPathListType * sortiePath = testList->GetOutput();
-
- otbGenericMsgDebugMacro(<< "Writing :");
-
- FILE *file = fopen(outputFilename, "w");
- if (file == nullptr)
- {
- fprintf(stderr, "Error, can't open file");
- exit(-1);
- }
- typedef itk::ContinuousIndex<double, 2> VertexType;
- typedef itk::VectorContainer<unsigned, VertexType> VertexListType;
- typedef VertexListType::ConstPointer VertexListTypePointer;
- VertexListTypePointer vertexList;
- VertexType cindex;
- double x1, y1;
- //double x2, y2;
-
- int nbPath = sortiePath->Size();
- otbGenericMsgDebugMacro(<< "NbSegment: " << nbPath);
- fprintf(file, "Nb Segment: %d\n", nbPath);
- for (int i = 0; i < nbPath; ++i)
- {
- vertexList = sortiePath->GetNthElement(i)->GetVertexList();
- cindex = vertexList->GetElement(0);
- x1 = cindex[0];
- y1 = cindex[1];
- cindex = vertexList->GetElement(1);
- //x2 = cindex[0];
- //y2 = cindex[1];
- fprintf(file, "%8.3f %8.3f\n", x1, y1);
- }
- fclose(file);
-
- // writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbBreakAngularPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbBreakAngularPathListFilter.cxx
deleted file mode 100644
index dde12b6ad8d6082b5ca64fedfa9d9a6bb0b0ab05..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbBreakAngularPathListFilter.cxx
+++ /dev/null
@@ -1,163 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbBreakAngularPathListFilter.h"
-
-#include "itkPolyLineParametricPath.h"
-#include <fstream>
-#include <vector>
-#include "otbMath.h"
-#include <cstdlib>
-
-int otbBreakAngularPathListFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * outfname = argv[1];
-
- typedef std::vector<double> PointsVectorType;
- typedef std::vector<PointsVectorType> PointsMatrixType;
- PointsMatrixType MatricePoints;
- PointsVectorType ListPoints;
- PointsVectorType ListMaxAngle;
-
- int cpt = 2;
-
- ListMaxAngle.clear();
- while (argv[cpt][0] != '|')
- {
- ListMaxAngle.push_back(static_cast<double>(::atof(argv[cpt])));
- ++cpt;
- }
- ++cpt;
- ListPoints.clear();
-
- while (argv[cpt] != nullptr)
- {
- if (argv[cpt][0] == '|')
- {
- if ((ListPoints.size() % 2) != 0)
- {
- itkGenericExceptionMacro(<< "Missing point in parameters !");
- }
- MatricePoints.push_back(ListPoints);
- ListPoints.clear();
- }
- else
- {
- ListPoints.push_back(static_cast<double>(::atof(argv[cpt])));
- }
- ++cpt;
- }
- MatricePoints.push_back(ListPoints);
-
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::BreakAngularPathListFilter<PathType> BreakAngularPathListFilterType;
- typedef BreakAngularPathListFilterType::PathListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- for (PointsMatrixType::iterator listpos = MatricePoints.begin(); listpos != MatricePoints.end(); ++listpos)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- std::cout << "List " << std::endl;
- for (PointsVectorType::iterator it = (*listpos).begin(); it != (*listpos).end(); ++it)
- {
- cindex[0] = *it;
- ++it;
- cindex[1] = *it;
- std::cout << "Point Index :" << cindex[0] << ";" << cindex[1] << std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
-
- // Instantiating object
- BreakAngularPathListFilterType::Pointer breakAngularFilter = BreakAngularPathListFilterType::New();
- breakAngularFilter->SetInput(InputPathList);
-
- std::ofstream file;
- file.open(outfname);
-
- for (PointsVectorType::iterator itAngle = ListMaxAngle.begin(); itAngle != ListMaxAngle.end(); ++itAngle)
- {
-
- breakAngularFilter->SetMaxAngle((*itAngle) * otb::CONST_PI / 180.);
- breakAngularFilter->Update();
-
- PathListType::Pointer OutputPathList = breakAngularFilter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "--------------------------------------------------------------------------" << std::endl;
- file << "MAX ANGULAR :" << breakAngularFilter->GetMaxAngle() << "(" << (*itAngle) << " deg.)" << std::endl;
- file << "INPUT list of Path " << ": " << std::endl;
- while (pathListIt != InputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
-
- counter = 1;
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
-
- } //Enf for angle
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbDrawPathAlign.cxx b/Modules/Detection/RoadExtraction/test/otbDrawPathAlign.cxx
deleted file mode 100644
index c5847cc841ae136d46887fce8fd8b6e2c2d86fc1..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbDrawPathAlign.cxx
+++ /dev/null
@@ -1,84 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-
-#include "itkMacro.h"
-#include "itkPolyLineParametricPath.h"
-
-#include "otbImageFileReader.h"
-#include "otbPathListSource.h"
-#include "otbImageToPathListAlignFilter.h"
-#include "otbDrawPathListFilter.h"
-#include "otbImageFileWriter.h"
-
-int otbDrawPathAlign(int itkNotUsed(argc), char * argv[])
-{
- const char * inputFilename = argv[1];
- const char * outputFilename = argv[2];
-
- typedef unsigned char InputPixelType;
- typedef unsigned char OutputPixelType;
- const unsigned int Dimension = 2;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef itk::PolyLineParametricPath<Dimension> PathType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef otb::ImageToPathListAlignFilter<InputImageType, PathType> PathListType;
- typedef PathListType::OutputPathListType OutputPathListType;
-
- typedef otb::DrawPathListFilter<InputImageType, PathType, OutputImageType> DrawPathFilterType;
-
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
-
- DrawPathFilterType::Pointer DrawPath = DrawPathFilterType::New();
- PathType::Pointer VertexList = PathType::New();
-
- reader->SetFileName(inputFilename);
- writer->SetFileName(outputFilename);
-
- typedef otb::ImageToPathListAlignFilter<InputImageType, PathType> PathListAlignType;
- PathListAlignType::Pointer testList = PathListAlignType::New();
-
- //OTB-FA-00010-CS
- testList->SetInput(reader->GetOutput());
- testList->Update();
-
- OutputPathListType * sortiePath = testList->GetOutput();
- int nbPath = sortiePath->Size();
- std::cout << "NbPath: " << nbPath << std::endl;
-
- InputImageType::ConstPointer imageIn = reader->GetOutput();
-
- DrawPath->SetInput(imageIn);
- DrawPath->SetInputPath(sortiePath);
-
- writer->SetInput(DrawPath->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbLikelihoodPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbLikelihoodPathListFilter.cxx
deleted file mode 100644
index a1a7054b0fec3afe46e7d85c3451ad2cb38c598a..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbLikelihoodPathListFilter.cxx
+++ /dev/null
@@ -1,157 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbLikelihoodPathListFilter.h"
-#include "otbPolyLineParametricPathWithValue.h"
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include <fstream>
-
-int otbLikelihoodPathListFilter(int itkNotUsed(argc), char * argv[])
-{
-
- std::cout << std::endl;
-
- const char * infname = argv[1];
- const char * outfname = argv[2];
-
- typedef std::vector<double> PointsVectorType;
- typedef std::vector<PointsVectorType> PointsMatrixType;
- PointsMatrixType MatricePoints;
- PointsVectorType ListPoints;
-
- int cpt = 3;
- ListPoints.clear();
-
- while (argv[cpt] != nullptr)
- {
- if (argv[cpt][0] == '|')
- {
- if ((ListPoints.size() % 2) != 0)
- {
- itkGenericExceptionMacro(<< "Missing point in parameters !");
- }
- MatricePoints.push_back(ListPoints);
- ListPoints.clear();
- }
- else
- {
- ListPoints.push_back(static_cast<double>(::atof(argv[cpt])));
- }
- ++cpt;
- }
- MatricePoints.push_back(ListPoints);
-
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::PolyLineParametricPathWithValue<double, Dimension> PathType;
- typedef otb::LikelihoodPathListFilter<PathType, ImageType> LikelihoodPathListFilterType;
- typedef LikelihoodPathListFilterType::PathListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- for (PointsMatrixType::iterator listpos = MatricePoints.begin(); listpos != MatricePoints.end(); ++listpos)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- std::cout << "List " << std::endl;
- for (PointsVectorType::iterator it = (*listpos).begin(); it != (*listpos).end(); ++it)
- {
- cindex[0] = *it;
- ++it;
- cindex[1] = *it;
- std::cout << "Point Index :" << cindex[0] << ";" << cindex[1] << std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
-
- //Instantiating object
- LikelihoodPathListFilterType::Pointer filter = LikelihoodPathListFilterType::New();
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(infname);
- reader->Update();
-
- filter->SetInput(InputPathList);
- filter->SetInputImage(reader->GetOutput());
- filter->Update();
-
- std::cout << "Filter execution ended" << std::endl;
-
- PathListType::Pointer OutputPathList = filter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "INPUT list of Path " << ": " << std::endl;
- while (pathListIt != InputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- counter = 1;
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << " Value: " << pathListIt.Get()->GetValue();
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbLinkPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbLinkPathListFilter.cxx
deleted file mode 100644
index c41995abfaa600794e2e725c52121ea06f1e47bb..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbLinkPathListFilter.cxx
+++ /dev/null
@@ -1,154 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbLinkPathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include "otbMath.h"
-#include <fstream>
-#include <cstdlib>
-
-int otbLinkPathListFilter(int itkNotUsed(argc), char * argv[])
-{
-
- std::cout << std::endl;
-
- const char * outfname = argv[1];
- const double distance = atof(argv[2]);
- const double angle = ::atof(argv[3]) * otb::CONST_PI / 180.;
-
- typedef std::vector<double> PointsVectorType;
- typedef std::vector<PointsVectorType> PointsMatrixType;
- PointsMatrixType MatricePoints;
- PointsVectorType ListPoints;
-
- int cpt = 4;
- ListPoints.clear();
-
- while (argv[cpt] != nullptr)
- {
- if (argv[cpt][0] == '|')
- {
- if ((ListPoints.size() % 2) != 0)
- {
- itkGenericExceptionMacro(<< "Missing point in parameters !");
- }
- MatricePoints.push_back(ListPoints);
- ListPoints.clear();
- }
- else
- {
- ListPoints.push_back(static_cast<double>(::atof(argv[cpt])));
- }
- ++cpt;
- }
- MatricePoints.push_back(ListPoints);
-
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::LinkPathListFilter<PathType> LinkPathListFilterType;
- typedef LinkPathListFilterType::PathListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- for (PointsMatrixType::iterator listpos = MatricePoints.begin(); listpos != MatricePoints.end(); ++listpos)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- std::cout << "List " << std::endl;
- for (PointsVectorType::iterator it = (*listpos).begin(); it != (*listpos).end(); ++it)
- {
- cindex[0] = *it;
- ++it;
- cindex[1] = *it;
- std::cout << "Point Index :" << cindex[0] << ";" << cindex[1] << std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
- //Instantiating object
- LinkPathListFilterType::Pointer filter = LinkPathListFilterType::New();
-
- filter->SetInput(InputPathList);
- filter->SetDistanceThreshold(distance);
- filter->SetAngularThreshold(angle);
- filter->Update();
-
- std::cout << "Filter execution ended" << std::endl;
-
- PathListType::Pointer OutputPathList = filter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "Maximum distance threshold: " << filter->GetDistanceThreshold() << " (" << distance << ")" << std::endl;
- file << "Maximum angle threshold: " << filter->GetAngularThreshold() << " (" << angle * 180 / otb::CONST_PI << ")" <<
- std::endl;
- file << "INPUT list of Path " << ": " << std::endl;
- while (pathListIt != InputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- counter = 1;
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbNeighborhoodScalarProductFilter.cxx b/Modules/Detection/RoadExtraction/test/otbNeighborhoodScalarProductFilter.cxx
deleted file mode 100644
index 75c62bb6ab0c1f770bdade075f0aabc90ad5cba7..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbNeighborhoodScalarProductFilter.cxx
+++ /dev/null
@@ -1,67 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbNeighborhoodScalarProductFilter.h"
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "itkGradientRecursiveGaussianImageFilter.h"
-
-int otbNeighborhoodScalarProductFilter(int itkNotUsed(argc), char * argv[])
-{
-
- const char * infname = argv[1];
- const char * outfname = argv[2];
- const char * diroutfname = argv[3];
- const double sigma = atof(argv[4]);
-
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef itk::CovariantVector<PixelType, Dimension> VectorPixelType;
- typedef otb::Image<VectorPixelType, Dimension> VectorImageType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::NeighborhoodScalarProductFilter<VectorImageType, ImageType, ImageType> FilterType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef itk::GradientRecursiveGaussianImageFilter<ImageType, VectorImageType> GradientFilterType;
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- GradientFilterType::Pointer gradient = GradientFilterType::New();
-
- reader->SetFileName(infname);
- reader->Update();
-
- gradient->SetInput(reader->GetOutput());
- gradient->SetSigma(sigma);
- filter->SetInput(gradient->GetOutput());
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
- writer = WriterType::New();
- writer->SetFileName(diroutfname);
- writer->SetInput(filter->GetOutputDirection());
- writer->Update();
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbNonMaxRemovalByDirectionFilter.cxx b/Modules/Detection/RoadExtraction/test/otbNonMaxRemovalByDirectionFilter.cxx
deleted file mode 100644
index cb8970e5de831bd4818789b586443a52d29d468d..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbNonMaxRemovalByDirectionFilter.cxx
+++ /dev/null
@@ -1,50 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbNonMaxRemovalByDirectionFilter.h"
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-
-int otbNonMaxRemovalByDirectionFilter(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef otb::NonMaxRemovalByDirectionFilter<ImageType, ImageType, ImageType> NonMaxRemovalByDirectionFilterType;
-
- // Instantiating object
- ReaderType::Pointer modReader = ReaderType::New();
- ReaderType::Pointer dirReader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- modReader->SetFileName(argv[1]);
- dirReader->SetFileName(argv[2]);
- writer->SetFileName(argv[3]);
- NonMaxRemovalByDirectionFilterType::Pointer filter = NonMaxRemovalByDirectionFilterType::New();
- filter->SetInput(modReader->GetOutput());
- filter->SetInputDirection(dirReader->GetOutput());
- writer->SetInput(filter->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbParallelLinePathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbParallelLinePathListFilter.cxx
deleted file mode 100644
index f2b67fc6ad757b8e6e93f86608a698e1ed339880..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbParallelLinePathListFilter.cxx
+++ /dev/null
@@ -1,125 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbParallelLinePathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include <cstdlib>
-
-int otbParallelLinePathListFilter(int itkNotUsed(argc), char * itkNotUsed(argv) [])
-{
-
- // We create some lines
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::ObjectList<PathType> PathListType;
-
- PathListType::Pointer lineList = PathListType::New();
- PathListType::Pointer parallelList = PathListType::New();
-
- typedef PathType::ContinuousIndexType ContinuousIndexType;
- ContinuousIndexType cindex;
-
- /*-----*/
- PathType::Pointer aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 1;
- cindex[1] = 1;
- aLine->AddVertex(cindex);
-
- cindex[0] = 1;
- cindex[1] = 100;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
- parallelList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 10;
- cindex[1] = 1;
- aLine->AddVertex(cindex);
-
- cindex[0] = 10;
- cindex[1] = 100;
- aLine->AddVertex(cindex);
- parallelList->PushBack(aLine);
- lineList->PushBack(aLine);
-
- /*-----*/
- aLine = PathType::New();
- aLine->Initialize();
- cindex[0] = 174;
- cindex[1] = 99;
- aLine->AddVertex(cindex);
-
- cindex[0] = 281;
- cindex[1] = 1;
- aLine->AddVertex(cindex);
-
- lineList->PushBack(aLine);
-
- // Parallel lines are detected.
-
- typedef otb::ParallelLinePathListFilter<PathType> ParallelLinePathType;
- ParallelLinePathType::Pointer parallelLinePathListFilter = ParallelLinePathType::New();
- parallelLinePathListFilter->SetDistanceThreshold(10);
- parallelLinePathListFilter->SetAngularThreshold(10);
- parallelLinePathListFilter->SetCommonDistanceThreshold(10);
- parallelLinePathListFilter->SetInput(lineList);
- parallelLinePathListFilter->Update();
-
- PathListType::Pointer pathList = parallelLinePathListFilter->GetOutput();
- PathListType::Iterator listIt = pathList->Begin();
-
- PathListType::Iterator parListIt = parallelList->Begin();
-
- // A path is a line segment in this case.
- while (listIt != pathList->End() && parListIt != parallelList->End())
- {
- PathType::VertexListType::ConstPointer vertexList = (listIt.Get())->GetVertexList();
-
- PathType::VertexListType::ConstPointer parVertexList = (parListIt.Get())->GetVertexList();
-
- PathType::VertexListType::ConstIterator pathIt = vertexList->Begin();
- PathType::VertexListType::ConstIterator parPathIt = parVertexList->Begin();
- // Loop over all the vertices in one path
- while (pathIt != vertexList->End() &&
- parPathIt != parVertexList->End())
- {
-
- if (pathIt.Value() != parPathIt.Value())
- {
- std::cout << pathIt.Index() << pathIt.Value() << std::endl;
- return EXIT_FAILURE;
-
- }
- ++pathIt;
- ++parPathIt;
- }
- ++listIt;
- ++parListIt;
- }
-
- return EXIT_SUCCESS;
-
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbRemoveIsolatedByDirectionFilter.cxx b/Modules/Detection/RoadExtraction/test/otbRemoveIsolatedByDirectionFilter.cxx
deleted file mode 100644
index a2a9ade45086a8b60e17e1c71ab78a2d5dcc6cb9..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbRemoveIsolatedByDirectionFilter.cxx
+++ /dev/null
@@ -1,50 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbRemoveIsolatedByDirectionFilter.h"
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-
-int otbRemoveIsolatedByDirectionFilter(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef otb::RemoveIsolatedByDirectionFilter<ImageType, ImageType, ImageType> RemoveIsolatedByDirectionFilterType;
-
- // Instantiating object
- ReaderType::Pointer modReader = ReaderType::New();
- ReaderType::Pointer dirReader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- modReader->SetFileName(argv[1]);
- dirReader->SetFileName(argv[2]);
- writer->SetFileName(argv[3]);
- RemoveIsolatedByDirectionFilterType::Pointer filter = RemoveIsolatedByDirectionFilterType::New();
- filter->SetInput(modReader->GetOutput());
- filter->SetInputDirection(dirReader->GetOutput());
- writer->SetInput(filter->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbRemoveTortuousPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbRemoveTortuousPathListFilter.cxx
deleted file mode 100644
index 21b28e0c90ec845d6c0e37887d2876a4fca2b6ee..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbRemoveTortuousPathListFilter.cxx
+++ /dev/null
@@ -1,144 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbRemoveTortuousPathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include <fstream>
-#include <cstdlib>
-
-int otbRemoveTortuousPathListFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * outfname = argv[1];
- const double threshold = atof(argv[2]);
-
- typedef std::vector<double> PointsVectorType;
- typedef std::vector<PointsVectorType> PointsMatrixType;
- PointsMatrixType MatricePoints;
- PointsVectorType ListPoints;
-
- int cpt = 3;
- ListPoints.clear();
-
- while (argv[cpt] != nullptr)
- {
- if (argv[cpt][0] == '|')
- {
- if ((ListPoints.size() % 2) != 0)
- {
- itkGenericExceptionMacro(<< "Missing point in parameters !");
- }
- MatricePoints.push_back(ListPoints);
- ListPoints.clear();
- }
- else
- {
- ListPoints.push_back(static_cast<double>(::atof(argv[cpt])));
- }
- ++cpt;
- }
- MatricePoints.push_back(ListPoints);
-
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::RemoveTortuousPathListFilter<PathType> RemoveTortuousPathListFilterType;
- typedef RemoveTortuousPathListFilterType::InputListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- for (PointsMatrixType::iterator listpos = MatricePoints.begin(); listpos != MatricePoints.end(); ++listpos)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- std::cout << "List " << std::endl;
- for (PointsVectorType::iterator it = (*listpos).begin(); it != (*listpos).end(); ++it)
- {
- cindex[0] = *it;
- ++it;
- cindex[1] = *it;
- std::cout << "Point Index :" << cindex[0] << ";" << cindex[1] << std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
- // Instantiating object
- RemoveTortuousPathListFilterType::Pointer filter = RemoveTortuousPathListFilterType::New();
-
- filter->SetInput(InputPathList);
- filter->GetFunctor().SetThreshold(threshold);
- filter->Update();
-
- PathListType::Pointer OutputPathList = filter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "Minimum Mean Distance: " << filter->GetFunctor().GetThreshold() << " (" << threshold << ")" << std::endl;
- file << "INPUT list of Path " << ": " << std::endl;
- while (pathListIt != InputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- counter = 1;
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbRemoveWrongDirectionFilter.cxx b/Modules/Detection/RoadExtraction/test/otbRemoveWrongDirectionFilter.cxx
deleted file mode 100644
index 146623060c18a74dc415f0a51f8a939254d7c999..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbRemoveWrongDirectionFilter.cxx
+++ /dev/null
@@ -1,50 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbRemoveWrongDirectionFilter.h"
-#include "otbImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-
-int otbRemoveWrongDirectionFilter(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef otb::RemoveWrongDirectionFilter<ImageType, ImageType, ImageType> RemoveWrongDirectionFilterType;
-
- // Instantiating object
- ReaderType::Pointer modReader = ReaderType::New();
- ReaderType::Pointer dirReader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- modReader->SetFileName(argv[1]);
- dirReader->SetFileName(argv[2]);
- writer->SetFileName(argv[3]);
- RemoveWrongDirectionFilterType::Pointer filter = RemoveWrongDirectionFilterType::New();
- filter->SetInput(modReader->GetOutput());
- filter->SetInputDirection(dirReader->GetOutput());
- writer->SetInput(filter->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbRoadExtractionFilter.cxx b/Modules/Detection/RoadExtraction/test/otbRoadExtractionFilter.cxx
deleted file mode 100644
index 80e757ab1b4a624493fbbab5b141e221ff63aff4..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbRoadExtractionFilter.cxx
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbImage.h"
-#include "otbRoadExtractionFilter.h"
-#include "otbDrawPathListFilter.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbPolyLineParametricPathWithValue.h"
-#include "otbMath.h"
-
-int otbRoadExtractionFilter(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- typedef otb::VectorImage<double, Dimension> InputImageType;
- typedef otb::Image<double, Dimension> OutputImageType;
- typedef otb::PolyLineParametricPathWithValue<double, Dimension> PathType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
- typedef otb::RoadExtractionFilter<InputImageType, PathType> RoadExtractionFilterType;
- typedef RoadExtractionFilterType::InputPixelType InputPixelType;
- typedef otb::DrawPathListFilter<OutputImageType, PathType, OutputImageType> DrawPathFilterType;
-
- //Parameters
- const char * inputFileName(argv[1]);
- const char * outputFileName(argv[2]);
- InputPixelType ReferencePixel;
- ReferencePixel.Reserve(4);
- ReferencePixel.SetElement(0, ::atof(argv[3]));
- ReferencePixel.SetElement(1, ::atof(argv[4]));
- ReferencePixel.SetElement(2, ::atof(argv[5]));
- ReferencePixel.SetElement(3, ::atof(argv[6]));
- const double Alpha = ::atof(argv[7]);
- const double AmplitudeThreshold = ::atof(argv[8]);
- const double Tolerance = ::atof(argv[9]);
- const double MaxAngle = ((otb::CONST_PI * ::atof(argv[10])) / 180.);
- const double FirstMeanDistanceThreshold = ::atof(argv[11]);
- const double SecondMeanDistanceThreshold = ::atof(argv[12]);
- const double LinkAngularThreshold = ((otb::CONST_PI * ::atof(argv[13])) / 180.);
- const double LinkDistanceThreshold = ::atof(argv[14]);
-
- // Instantiating object
- ReaderType::Pointer reader = ReaderType::New();
- RoadExtractionFilterType::Pointer roadExtraction = RoadExtractionFilterType::New();
- DrawPathFilterType::Pointer draw = DrawPathFilterType::New();
- WriterType::Pointer writer = WriterType::New();
-
- //Initialization parameters
- reader->SetFileName(inputFileName);
-
- roadExtraction->SetInput(reader->GetOutput());
- roadExtraction->SetReferencePixel(ReferencePixel);
- roadExtraction->SetAlpha(Alpha);
- roadExtraction->SetAmplitudeThreshold(AmplitudeThreshold);
- roadExtraction->SetTolerance(Tolerance);
- roadExtraction->SetMaxAngle(MaxAngle);
- roadExtraction->SetFirstMeanDistanceThreshold(FirstMeanDistanceThreshold);
- roadExtraction->SetSecondMeanDistanceThreshold(SecondMeanDistanceThreshold);
- roadExtraction->SetAngularThreshold(LinkAngularThreshold);
- roadExtraction->SetDistanceThreshold(LinkDistanceThreshold);
-
- reader->GenerateOutputInformation();
- OutputImageType::Pointer image = OutputImageType::New();
- image->CopyInformation(reader->GetOutput());
- image->SetRegions(image->GetLargestPossibleRegion());
- image->Allocate();
- image->FillBuffer(0);
-
- draw->SetInput(image);
- //Use internal value of path
- draw->UseInternalPathValueOn();
- draw->SetInputPath(roadExtraction->GetOutput());
-
- writer->SetFileName(outputFileName);
- writer->SetInput(draw->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbRoadExtractionTestDriver.cxx b/Modules/Detection/RoadExtraction/test/otbRoadExtractionTestDriver.cxx
deleted file mode 100644
index 2765863108877e2fb1ecda2ec2914a4e15316586..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbRoadExtractionTestDriver.cxx
+++ /dev/null
@@ -1,40 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbLikelihoodPathListFilter);
- REGISTER_TEST(otbRemoveWrongDirectionFilter);
- REGISTER_TEST(otbSimplifyPathListFilter);
- REGISTER_TEST(otbAlignImageToPath);
- REGISTER_TEST(otbNonMaxRemovalByDirectionFilter);
- REGISTER_TEST(otbRoadExtractionFilter);
- REGISTER_TEST(otbLinkPathListFilter);
- REGISTER_TEST(otbRemoveTortuousPathListFilter);
- REGISTER_TEST(otbParallelLinePathListFilter);
- REGISTER_TEST(otbRemoveIsolatedByDirectionFilter);
- REGISTER_TEST(otbVectorDataToRoadDescriptionFilter);
- REGISTER_TEST(otbSimplifyManyPathListFilter);
- REGISTER_TEST(otbNeighborhoodScalarProductFilter);
- REGISTER_TEST(otbDrawPathAlign);
- REGISTER_TEST(otbBreakAngularPathListFilter);
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbSimplifyManyPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbSimplifyManyPathListFilter.cxx
deleted file mode 100644
index 12a79b10a8160ea6d9fb4af08c92acb764607d27..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbSimplifyManyPathListFilter.cxx
+++ /dev/null
@@ -1,114 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbSimplifyPathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include <fstream>
-#include <cstdlib>
-
-/**
- * This filter is intended to test the multithreading capabilities
- * of the otb::UnaryFunctorObjectListFilter
- */
-
-int otbSimplifyManyPathListFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * outfname = argv[1];
- const double tolerance = atof(argv[2]);
-
-// typedef std::vector<double> PointsVectorType;
-// typedef std::vector< PointsVectorType > PointsMatrixType;
-// PointsMatrixType MatricePoints;
-// PointsVectorType ListPoints;
-
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::SimplifyPathListFilter<PathType> SimplifyPathListFilterType;
- typedef SimplifyPathListFilterType::InputListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- unsigned long int numberOfPaths = 10000;
- srand(123456);
-
- for (unsigned long int i = 0; i < numberOfPaths; ++i)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- unsigned int numberOfPoints = static_cast<int>((rand() / (RAND_MAX + 1.0)) * 90) + 10;
-// std::cout << "List :" << numberOfPoints << " points" << std::endl;
- cindex[0] = 0;
- cindex[1] = 0;
- for (unsigned int j = 0; j < numberOfPoints; ++j)
- {
- cindex[0] += (rand() / (RAND_MAX + 1.0)) * 100 - 50;
- cindex[1] += (rand() / (RAND_MAX + 1.0)) * 100 - 50;
-// std::cout << "Point Index :"<<cindex[0]<<", "<<cindex[1]<<std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
- // Instantiating object
- SimplifyPathListFilterType::Pointer simplifyFilter = SimplifyPathListFilterType::New();
-
- simplifyFilter->SetInput(InputPathList);
- simplifyFilter->GetFunctor().SetTolerance(tolerance);
- simplifyFilter->Update();
-
- PathListType::Pointer OutputPathList = simplifyFilter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "TOLERANCE: " << simplifyFilter->GetFunctor().GetTolerance() << "(" << tolerance << ")" << std::endl;
-
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbSimplifyPathListFilter.cxx b/Modules/Detection/RoadExtraction/test/otbSimplifyPathListFilter.cxx
deleted file mode 100644
index 54095a10ec232ab00a3ac9cc1e55fd27d27a822f..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbSimplifyPathListFilter.cxx
+++ /dev/null
@@ -1,144 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbSimplifyPathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include <fstream>
-#include <cstdlib>
-
-int otbSimplifyPathListFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * outfname = argv[1];
- const double tolerance = atof(argv[2]);
-
- typedef std::vector<double> PointsVectorType;
- typedef std::vector<PointsVectorType> PointsMatrixType;
- PointsMatrixType MatricePoints;
- PointsVectorType ListPoints;
-
- int cpt = 3;
- ListPoints.clear();
-
- while (argv[cpt] != nullptr)
- {
- if (argv[cpt][0] == '|')
- {
- if ((ListPoints.size() % 2) != 0)
- {
- itkGenericExceptionMacro(<< "Missing point in parameters !");
- }
- MatricePoints.push_back(ListPoints);
- ListPoints.clear();
- }
- else
- {
- ListPoints.push_back(static_cast<double>(::atof(argv[cpt])));
- }
- ++cpt;
- }
- MatricePoints.push_back(ListPoints);
-
- const unsigned int Dimension = 2;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::SimplifyPathListFilter<PathType> SimplifyPathListFilterType;
- typedef SimplifyPathListFilterType::InputListType PathListType;
- PathType::ContinuousIndexType cindex;
-
- PathListType::Pointer InputPathList = PathListType::New();
-
- //Generate PathList
- for (PointsMatrixType::iterator listpos = MatricePoints.begin(); listpos != MatricePoints.end(); ++listpos)
- {
- PathType::Pointer path = PathType::New();
- //Generate PathList
- std::cout << "List " << std::endl;
- for (PointsVectorType::iterator it = (*listpos).begin(); it != (*listpos).end(); ++it)
- {
- cindex[0] = *it;
- ++it;
- cindex[1] = *it;
- std::cout << "Point Index :" << cindex[0] << ";" << cindex[1] << std::endl;
- path->AddVertex(cindex);
- }
- InputPathList->PushBack(path);
- }
- // Instantiating object
- SimplifyPathListFilterType::Pointer simplifyFilter = SimplifyPathListFilterType::New();
-
- simplifyFilter->SetInput(InputPathList);
- simplifyFilter->GetFunctor().SetTolerance(tolerance);
- simplifyFilter->Update();
-
- PathListType::Pointer OutputPathList = simplifyFilter->GetOutput();
-
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 1;
- PathListIteratorType pathListIt = InputPathList->Begin();
-
- file << "TOLERANCE: " << simplifyFilter->GetFunctor().GetTolerance() << "(" << tolerance << ")" << std::endl;
- file << "INPUT list of Path " << ": " << std::endl;
- while (pathListIt != InputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- counter = 1;
- pathListIt = OutputPathList->Begin();
- file << "OUTPUT list of Path " << ": " << std::endl;
- while (pathListIt != OutputPathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/RoadExtraction/test/otbVectorDataToRoadDescriptionFilter.cxx b/Modules/Detection/RoadExtraction/test/otbVectorDataToRoadDescriptionFilter.cxx
deleted file mode 100644
index 98715c2b867184293e7943a188a534c96a928222..0000000000000000000000000000000000000000
--- a/Modules/Detection/RoadExtraction/test/otbVectorDataToRoadDescriptionFilter.cxx
+++ /dev/null
@@ -1,100 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbVectorDataToRoadDescriptionFilter.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataFileWriter.h"
-#include "otbVectorDataProperties.h"
-#include "otbRemoteSensingRegion.h"
-#include "otbVectorDataIntoImageProjectionFilter.h"
-
-
-
-
-
-int otbVectorDataToRoadDescriptionFilter(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputImg = argv[2];
- const char * inputDB = argv[3];
- const char * outputVD = argv[4];
- const char * DEMDirectory = argv[5];
- int DisplayWarnings = atoi(argv[6]);
-
- typedef double PrecisionType;
- typedef otb::VectorData<PrecisionType, 2> VectorDataType;
- typedef otb::VectorImage<PrecisionType> ImageType;
-
- typedef otb::VectorDataToRoadDescriptionFilter<VectorDataType, ImageType>
- VectorDataToRoadDescriptionFilterType;
-
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::VectorDataFileReader<VectorDataType>
- VectorDataReaderType;
- typedef otb::VectorDataFileWriter<VectorDataType>
- VectorDataWriterType;
- typedef otb::VectorDataIntoImageProjectionFilter<VectorDataType, ImageType>
- VectorDataReProjFilter;
-
-
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReaderType::Pointer DBReader = VectorDataReaderType::New();
- ImageReaderType::Pointer reader = ImageReaderType::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- VectorDataReProjFilter::Pointer vdReProjFilter = VectorDataReProjFilter::New();
-
- VectorDataToRoadDescriptionFilterType::Pointer filter =
- VectorDataToRoadDescriptionFilterType::New();
-
- if (!DisplayWarnings)
- {
- reader->SetGlobalWarningDisplay(0);
- }
- otb::DEMHandler::Instance()->OpenDEMDirectory(DEMDirectory);
-
- reader->SetFileName(inputImg);
- reader->UpdateOutputInformation();
-
- DBReader->SetFileName(inputDB);
- DBReader->Update();
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- vdReProjFilter->SetInputImage(reader->GetOutput());
- vdReProjFilter->SetInputVectorData(vdReader->GetOutput());
- vdReProjFilter->SetUseOutputSpacingAndOriginFromImage(true);
- vdReProjFilter->Update();
-
- filter->SetInput(vdReProjFilter->GetOutput());
- filter->AddOpticalImage(reader->GetOutput());
- filter->AddBuildingsDB(DBReader->GetOutput());
-
- vdWriter->SetFileName(outputVD);
- vdWriter->SetInput(filter->GetOutput());
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/UrbanArea/CMakeLists.txt b/Modules/Detection/UrbanArea/CMakeLists.txt
deleted file mode 100644
index 3bc279da0f37ffd74bdb90c4814be43d9ee1dec6..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBUrbanArea)
-otb_module_impl()
diff --git a/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.h b/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.h
deleted file mode 100644
index c178c9acc56ab65b4118729618177488b95368cd..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.h
+++ /dev/null
@@ -1,275 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbUrbanAreaDetectionImageFilter_h
-#define otbUrbanAreaDetectionImageFilter_h
-
-#include "otbImage.h"
-#include "otbWaterIndicesFunctor.h"
-#include "otbVegetationIndicesFunctor.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkBinaryErodeImageFilter.h"
-#include "itkBinaryDilateImageFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "itkMacro.h"
-#include "itkSobelEdgeDetectionImageFilter.h"
-#include "otbEdgeDetectorImageFilter.h"
-#include "otbEdgeDensityImageFilter.h"
-#include "otbBinaryImageDensityFunction.h"
-#include "otbVectorImageToIntensityImageFilter.h"
-
-namespace otb
-{
-
-namespace Functor
-{
-
-/** \class RadiometricNonWaterNonVegetationIndexFunctor
- * \brief This functor computes ndwi and ndvi of an image
- * \brief in order to find urban areas and generate a grayscale image
- *
- * \ingroup OTBUrbanArea
- */
-template<class TInput, class TOutput = double>
-class RadiometricNonWaterNonVegetationIndexFunctor
-{
-public:
- typedef Functor::NDVI<double, double> VegetationFunctorType;
- typedef Functor::NDWI2<double, double> WaterFunctorType;
- typedef TOutput ValueType;
-
- VegetationFunctorType GetVegetationFunctor(){ return m_VegetationFunctor; }
- WaterFunctorType GetWaterFunctor(){ return m_WaterFunctor; }
-
- void SetRedIndex(int id)
- {
- m_VegetationFunctor.SetBandIndex(CommonBandNames::RED, id);
- }
- void SetGreenIndex(int id)
- {
- m_WaterFunctor.SetBandIndex(CommonBandNames::GREEN, id);
- }
- void SetNIRIndex(int id)
- {
- m_VegetationFunctor.SetBandIndex(CommonBandNames::NIR, id);
- m_WaterFunctor.SetBandIndex(CommonBandNames::NIR, id);
- }
-
- RadiometricNonWaterNonVegetationIndexFunctor(){}
- virtual ~RadiometricNonWaterNonVegetationIndexFunctor(){}
-
- inline TOutput operator ()(const TInput& pInPix)
- {
- TOutput lVIval, lWIval, lOutPix;
-
- TInput zero = pInPix;
- zero.Fill(0);
- if (pInPix != zero)
- {
- lVIval = static_cast<ValueType>(std::max(0., m_VegetationFunctor(pInPix)));
- lWIval = static_cast<ValueType>(std::max(0., m_WaterFunctor(pInPix)));
-
- lOutPix = std::sqrt(std::abs((1 - lVIval) * (1 - lWIval)));
- }
- else lOutPix = 0;
-
- return lOutPix;
- }
-
-protected:
- VegetationFunctorType m_VegetationFunctor;
- WaterFunctorType m_WaterFunctor;
-
-};
-
-/** \class RadiometricNonWaterNonVegetationDetectionFunctor
- * \brief This functor uses computes RadiometricNonWaterNonVegetationIndexFunctor
- * \brief and appli a threshold to produce a binary image
- *
- * \ingroup OTBUrbanArea
- */
-template<class TInput, class TOutput>
-class RadiometricNonWaterNonVegetationDetectionFunctor
-{
-public:
- typedef RadiometricNonWaterNonVegetationIndexFunctor<TInput> RadiometricNonWaterNonVegetationIndexFunctorType;
-
- RadiometricNonWaterNonVegetationDetectionFunctor()
- {
- m_LowerThreshold = 0.0;
- m_UpperThreshold = 1.0;
- }
-
- virtual ~RadiometricNonWaterNonVegetationDetectionFunctor() {}
- inline TOutput operator ()(const TInput& inPix)
- {
- // The vegetation and water areas are put to 0.
- double indexesVal = static_cast<double>(m_RadiometricNonWaterNonVegetationIndexFunctor(inPix));
-
- if ((indexesVal > m_LowerThreshold) && (indexesVal <= m_UpperThreshold))
- {
- return static_cast<TOutput>(1);
- }
- else
- {
- return static_cast<TOutput>(0);
- }
- }
-
- void SetLowerThreshold(double threshold){ m_LowerThreshold = threshold; }
- void SetUpperThreshold(double threshold){ m_UpperThreshold = threshold; }
- double GetLowerThreshold(){ return m_LowerThreshold; }
- double GetUpperThreshold(){ return m_UpperThreshold; }
-
- void SetRedIndex(int id){ m_RadiometricNonWaterNonVegetationIndexFunctor.SetRedIndex(id); }
- void SetGreenIndex(int id){ m_RadiometricNonWaterNonVegetationIndexFunctor.SetGreenIndex(id); }
- void SetNIRIndex(int id){ m_RadiometricNonWaterNonVegetationIndexFunctor.SetNIRIndex(id); }
-
-protected:
- RadiometricNonWaterNonVegetationIndexFunctorType m_RadiometricNonWaterNonVegetationIndexFunctor;
- double m_LowerThreshold;
- double m_UpperThreshold;
-
-};
-
-} //end namespace functor
-
-/** \class UrbanAreaDetectionImageFilter
- * \brief This filter uses associated functors to produce a binary or grayscale image
- * \brief where the white areas represents the urban areas.
- *
- * \ingroup OTBUrbanArea
- */
-template <class TInputImage, class TOutputImage,
- class TFunction = Functor::RadiometricNonWaterNonVegetationIndexFunctor<
- typename TInputImage::PixelType,
- typename TOutputImage::PixelType> >
-class ITK_EXPORT UrbanAreaDetectionImageFilter :
- public itk::ImageToImageFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard class typedefs. */
- typedef UrbanAreaDetectionImageFilter Self;
- typedef itk::ImageToImageFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(UrbanAreaDetectionImageFilter, itk::ImageToImageFilter);
-
- /** Images typedefs */
- typedef TInputImage VectorImageType;
- typedef TOutputImage OutputImageType;
- typedef double SingleImagePixelType;
- typedef Image<SingleImagePixelType, 2> SingleImageType;
- typedef SingleImageType::SizeType SizeType;
- typedef typename OutputImageType::PixelType OutputImagePixelType;
- typedef typename VectorImageType::PixelType VectorImagePixelType;
-
- /** Filters typedefs */
- // NonVegetationNonWaterIndexFilter
- typedef Functor::RadiometricNonWaterNonVegetationDetectionFunctor<VectorImagePixelType,
- OutputImagePixelType> FunctorType;
- typedef itk::UnaryFunctorImageFilter <VectorImageType, OutputImageType,
- FunctorType> UrbanAreaExtractionFilterType;
- typedef typename UrbanAreaExtractionFilterType::Pointer
- UrbanAreaExtrationFilterPointerType;
- // Erode/Dilate Filters
- typedef typename itk::BinaryBallStructuringElement<OutputImagePixelType,
- 2> StructuringElementType;
- typedef typename itk::BinaryErodeImageFilter<OutputImageType, OutputImageType,
- StructuringElementType> ErodeFilterType;
- typedef typename itk::BinaryDilateImageFilter<OutputImageType, OutputImageType,
- StructuringElementType> DilateFilterType;
- // Intensity
- typedef VectorImageToIntensityImageFilter<VectorImageType, SingleImageType> IntensityFilterType;
- typedef typename IntensityFilterType::Pointer IntensityFilterPointerType;
- // EdgeDensityFilter
- typedef BinaryImageDensityFunction<SingleImageType>
- CountFunctionType;
- typedef itk::SobelEdgeDetectionImageFilter<SingleImageType, SingleImageType> SobelType;
- typedef EdgeDetectorImageFilter<SingleImageType, SingleImageType,
- SobelType> SobelDetectorType;
- typedef EdgeDensityImageFilter<SingleImageType, SingleImageType, SobelDetectorType,
- CountFunctionType> EdgeDensityFilterType;
- typedef typename EdgeDensityFilterType::Pointer
- EdgeDensityFilterPointerType;
- // Threshold
- typedef itk::BinaryThresholdImageFilter<SingleImageType, OutputImageType> ThresholdFilterType;
- typedef typename ThresholdFilterType::Pointer ThresholdFilterPointerType;
- // Multiply
- typedef itk::MultiplyImageFilter<VectorImageType, OutputImageType, VectorImageType> MultiplyImageFilterType;
- typedef typename MultiplyImageFilterType::Pointer MultiplyImageFilterPointerType;
-
- /** Get/Set indices */
- void SetRedIndex(int id){ m_UrbanAreaExtractionFilter->GetFunctor().SetRedIndex(id); }
- void SetGreenIndex(int id){ m_UrbanAreaExtractionFilter->GetFunctor().SetGreenIndex(id); }
- void SetNIRIndex(int id){ m_UrbanAreaExtractionFilter->GetFunctor().SetNIRIndex(id); }
- unsigned int GetRedIndex(){ return m_UrbanAreaExtractionFilter->GetFunctor().GetRedIndex(); }
- unsigned int GetGreenIndex(){ return m_UrbanAreaExtractionFilter->GetFunctor().GetGreenIndex(); }
- unsigned int GetNIRIndex(){ return m_UrbanAreaExtractionFilter->GetFunctor().GetNIRIndex(); }
- /** Get/Set threshold values */
- itkGetMacro(ThresholdValue, double);
- itkSetMacro(ThresholdValue, double);
- itkGetMacro(ThresholdDensity, double);
- itkSetMacro(ThresholdDensity, double);
- itkGetMacro(SobelLowerThreshold, double);
- itkSetMacro(SobelLowerThreshold, double);
- itkGetMacro(SobelUpperThreshold, double);
- itkSetMacro(SobelUpperThreshold, double);
-
- /** Methods */
- void GenerateData() override;
-
-protected:
- UrbanAreaDetectionImageFilter();
- ~UrbanAreaDetectionImageFilter() override{}
-
-private:
- UrbanAreaDetectionImageFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /** Filters */
- IntensityFilterPointerType m_IntensityFilter;
- EdgeDensityFilterType::Pointer m_EdgeDensityFilter;
- SobelDetectorType::Pointer m_SobelFilter;
- ThresholdFilterPointerType m_Thresholder;
- UrbanAreaExtrationFilterPointerType m_UrbanAreaExtractionFilter;
- MultiplyImageFilterPointerType m_MultiplyFilter;
-
- /** Thresholds */
- double m_ThresholdValue;
- double m_ThresholdDensity;
-
- double m_SobelLowerThreshold;
- double m_SobelUpperThreshold;
-
-}; // end class RadiometricNonWaterNonVegetationDetectionImageFilter
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbUrbanAreaDetectionImageFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.hxx b/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.hxx
deleted file mode 100644
index f9cc85fd1fe317ae0122d7185a102200295b964c..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/include/otbUrbanAreaDetectionImageFilter.hxx
+++ /dev/null
@@ -1,109 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbUrbanAreaDetectionImageFilter_hxx
-#define otbUrbanAreaDetectionImageFilter_hxx
-
-#include "otbUrbanAreaDetectionImageFilter.h"
-#include "itkProgressAccumulator.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage, class TFunction>
-UrbanAreaDetectionImageFilter<TInputImage, TOutputImage, TFunction>
-::UrbanAreaDetectionImageFilter()
-{
-
- m_IntensityFilter = IntensityFilterType::New();
- m_EdgeDensityFilter = EdgeDensityFilterType::New();
- m_SobelFilter = SobelDetectorType::New();
- m_Thresholder = ThresholdFilterType::New();
- m_UrbanAreaExtractionFilter = UrbanAreaExtractionFilterType::New();
-
- m_MultiplyFilter = MultiplyImageFilterType::New();
-
- /** Init the Pipeline */
- // EdgeDensity
- m_EdgeDensityFilter->SetInput(m_IntensityFilter->GetOutput());
- m_EdgeDensityFilter->SetDetector(m_SobelFilter);
- // Threshold
- m_Thresholder->SetInput(m_EdgeDensityFilter->GetOutput());
- // Mask Image
- m_MultiplyFilter->SetInput2(m_Thresholder->GetOutput());
- // NonVegetationNonWaterIndex
- m_UrbanAreaExtractionFilter->SetInput(m_MultiplyFilter->GetOutput());
-
- m_ThresholdValue = 0.5;
- m_ThresholdDensity = 0.1;
- m_SobelLowerThreshold = -100.0;
- m_SobelUpperThreshold = 200.0;
-}
-
-/**
- * Parameters the filters of the pipeline
- */
-template <class TInputImage, class TOutputImage, class TFunction>
-void
-UrbanAreaDetectionImageFilter<TInputImage, TOutputImage, TFunction>
-::GenerateData()
-{
-
- // Intensity
- m_IntensityFilter->SetInput(this->GetInput());
-
- // Edge Density
- m_SobelFilter->SetLowerThreshold(m_SobelLowerThreshold);
- m_SobelFilter->SetUpperThreshold(m_SobelUpperThreshold);
- SizeType lSize;
- lSize[0] = static_cast<unsigned int>(10);
- lSize[1] = static_cast<unsigned int>(10);
- m_EdgeDensityFilter->SetNeighborhoodRadius(lSize);
-
- // Threshold
- m_Thresholder->SetInsideValue(0);
- m_Thresholder->SetOutsideValue(1);
- m_Thresholder->SetLowerThreshold(-10.);
- m_Thresholder->SetUpperThreshold(m_ThresholdDensity);
-
- // Apply the mask on the input image
- m_MultiplyFilter->SetInput1(this->GetInput());
-
- // Give a threshold to urbanAreaFilter
- m_UrbanAreaExtractionFilter->GetFunctor().SetLowerThreshold(m_ThresholdValue);
-
- // Progress accumulator
- itk::ProgressAccumulator::Pointer progress = itk::ProgressAccumulator::New();
- progress->SetMiniPipelineFilter(this);
- progress->RegisterInternalFilter(m_UrbanAreaExtractionFilter, 0.5f);
-
- /** GraftOutput */
- m_UrbanAreaExtractionFilter->GraftOutput(this->GetOutput());
- m_UrbanAreaExtractionFilter->Update();
- this->GraftOutput(m_UrbanAreaExtractionFilter->GetOutput());
-
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Detection/UrbanArea/otb-module.cmake b/Modules/Detection/UrbanArea/otb-module.cmake
deleted file mode 100644
index fdbd78381f39a9606ef054a34b63afe218380753..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/otb-module.cmake
+++ /dev/null
@@ -1,38 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "This module is concerned with the detection of urban area.")
-
-otb_module(OTBUrbanArea
- DEPENDS
- OTBStatistics
- OTBITK
- OTBImageBase
- OTBEdge
- OTBImageManipulation
- OTBIndices
-
- TEST_DEPENDS
- OTBTestKernel
- OTBImageIO
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Detection/UrbanArea/test/CMakeLists.txt b/Modules/Detection/UrbanArea/test/CMakeLists.txt
deleted file mode 100644
index 48c2ed26443e5dd8564dfc84ecd9bceb0de148c8..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/test/CMakeLists.txt
+++ /dev/null
@@ -1,47 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBUrbanAreaTests
-otbUrbanAreaTestDriver.cxx
-otbUrbanAreaDetectionImageFilter.cxx
-)
-
-add_executable(otbUrbanAreaTestDriver ${OTBUrbanAreaTests})
-target_link_libraries(otbUrbanAreaTestDriver ${OTBUrbanArea-Test_LIBRARIES})
-otb_module_target_label(otbUrbanAreaTestDriver)
-
-# Tests Declaration
-
-
-otb_add_test(NAME raTvUrbanAreaDetectionImageFilter COMMAND otbUrbanAreaTestDriver
- --compare-image ${EPSILON_8} ${BASELINE}/raTvUrbanAreaDetection.png
- ${TEMP}/raTvUrbanAreaDetection.png
- otbUrbanAreaDetectionImageFilter
- ${INPUTDATA}/qb_RoadExtract2sub200x200.tif
- ${TEMP}/raTvUrbanAreaDetection.png
- 3 # red
- 2 # green
- 4 # nir
- 0.8 # threshold NDVI+NDWI
- 0.005 # threshold EdgeDensity
- )
-
diff --git a/Modules/Detection/UrbanArea/test/otbUrbanAreaDetectionImageFilter.cxx b/Modules/Detection/UrbanArea/test/otbUrbanAreaDetectionImageFilter.cxx
deleted file mode 100644
index cac601a228731321ee4f17e2f45577f310261e5d..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/test/otbUrbanAreaDetectionImageFilter.cxx
+++ /dev/null
@@ -1,64 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbUrbanAreaDetectionImageFilter.h"
-
-int otbUrbanAreaDetectionImageFilter(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> InputVectorImageType;
- typedef otb::Image<unsigned char, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputVectorImageType> ReaderType;
-
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef otb::UrbanAreaDetectionImageFilter<InputVectorImageType,
- OutputImageType> UrbanAreaDetectionFilterType;
-
- // Instantiating objects
- UrbanAreaDetectionFilterType::Pointer filter = UrbanAreaDetectionFilterType::New();
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
-
- const char * inputFilename = argv[1];
- const char * outputFilename = argv[2];
-
- reader->SetFileName(inputFilename);
- writer->SetFileName(outputFilename);
-
- filter->SetInput(reader->GetOutput());
- filter->SetRedIndex(::atoi(argv[3]));
- filter->SetGreenIndex(::atoi(argv[4]));
- filter->SetNIRIndex(::atoi(argv[5]));
- filter->SetThresholdValue(::atof(argv[6]));
- filter->SetThresholdDensity(::atof(argv[7]));
-
- writer->SetInput(filter->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Detection/UrbanArea/test/otbUrbanAreaTestDriver.cxx b/Modules/Detection/UrbanArea/test/otbUrbanAreaTestDriver.cxx
deleted file mode 100644
index 2d035d4ce44de5ef7094525271d5d64fc6603460..0000000000000000000000000000000000000000
--- a/Modules/Detection/UrbanArea/test/otbUrbanAreaTestDriver.cxx
+++ /dev/null
@@ -1,26 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbUrbanAreaDetectionImageFilter);
-}
diff --git a/Modules/Feature/Edge/test/CMakeLists.txt b/Modules/Feature/Edge/test/CMakeLists.txt
index 687442cbfefdfdabffaa329e34f29029d1cb5a25..171dbfe4c705dfb54e101cc0c9697fcad5cb3fd7 100644
--- a/Modules/Feature/Edge/test/CMakeLists.txt
+++ b/Modules/Feature/Edge/test/CMakeLists.txt
@@ -120,7 +120,7 @@ otb_add_test(NAME bfTvPersistentVectorizationImageFilter COMMAND otbEdgeTestDriv
${BASELINE_FILES}/bfTvPersistentVectorizationImageFilterOutput.txt
${TEMP}/bfTvPersistentVectorizationImageFilterOutput.txt
otbPersistentVectorizationFilter
- ${INPUTDATA}/Seg1InputForRCC8Graph.tif
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
${TEMP}/bfTvPersistentVectorizationImageFilterOutput.txt
)
diff --git a/Modules/Feature/SeamCarving/CMakeLists.txt b/Modules/Feature/SeamCarving/CMakeLists.txt
deleted file mode 100644
index 48e2f8a8d73200ced3943178074537e8688b16ef..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBSeamCarving)
-otb_module_impl()
diff --git a/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.h b/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.h
deleted file mode 100644
index 7066a891f52719b0371d20eb5a13150e7a393def..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.h
+++ /dev/null
@@ -1,141 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbAddCarvingPathFilter_h
-#define otbAddCarvingPathFilter_h
-
-#include "itkImageAndPathToImageFilter.h"
-#include "itkImageSliceIteratorWithIndex.h"
-
-namespace otb
-{
-/** \class AddCarvingPathFilter
- * \brief This class add pixels given in one path
- *
- * This filter add pixels found by the otb::ImageToCarvingPathFilter
- * thus increasing the image size.
- * the image (if Direction is set to 0) or from left to right
- * (if direction is set to 1). Pixel value is computed as the average
- * between the neighborhood pixels.
- *
- * This is one component necessary to apply the seam carving algorithm
- * published by Shai Avidan, Ariel Shamir,
- * Seam Carving for Content-Aware Image Resizing,
- * ACM Transactions on Graphics, Volume 26, Number 3,
- * SIGGRAPH 2007
- *
- * \par INPUTS
- * The first input is an image, usually, the same one provided to the
- * otb::ImageToCarvingPathFilter
- * The second input is a path, typically the output of otb::ImageToCarvingPathFilter.
- *
- * \par OUTPUTS
- * The output is an image with a bigger size than the input image. There is one more
- * column if direction is 0 and one more line if direction is 1.
- *
- * \sa ImageToCarvingPathFilter
- *
- *
- * \ingroup PathFilters
- * \ingroup ImageFilters
- *
- * \ingroup OTBSeamCarving
- */
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-class ITK_EXPORT AddCarvingPathFilter : public itk::ImageAndPathToImageFilter<TInputImage, TInputPath, TOutputImage>
-{
-public:
- /** Standard class typedefs. */
- typedef AddCarvingPathFilter Self;
- typedef itk::ImageAndPathToImageFilter<TInputImage, TInputPath, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(AddCarvingPathFilter, itk::ImageAndPathToImageFilter);
-
- /** Some convenient typedefs. */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::Pointer InputImagePointer;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::RegionType InputImageRegionType;
- typedef typename InputImageType::PixelType InputImagePixelType;
- typedef TInputPath InputPathType;
- typedef typename InputPathType::Pointer InputPathPointer;
- typedef typename InputPathType::ConstPointer InputPathConstPointer;
- typedef typename InputPathType::InputType InputPathInputType;
- typedef typename InputPathType::OutputType InputPathOutputType;
- typedef typename InputPathType::IndexType InputPathIndexType;
- typedef typename InputPathType::OffsetType InputPathOffsetType;
- typedef TOutputImage OutputImageType;
- typedef typename OutputImageType::Pointer OutputImagePointer;
- typedef typename OutputImageType::ConstPointer OutputImageConstPointer;
-
- typedef typename OutputImageType::RegionType OutputImageRegionType;
- typedef typename OutputImageType::PixelType OutputImagePixelType;
- typedef typename OutputImageType::ValueType OutputImageValueType;
-
-// typedef typename itk::ImageRegionConstIterator<InputImageType> InputIteratorType;
-// typedef typename itk::ImageRegionIterator<OutputImageType> OutputIteratorType;
- typedef typename itk::ImageSliceConstIteratorWithIndex<InputImageType> InputIteratorType;
- typedef typename itk::ImageSliceIteratorWithIndex<OutputImageType> OutputIteratorType;
-
- /** Set/Get the path input of this process object.
- Note: these methods are adding to get the proper name */
- void SetInputPath(const TInputPath * path);
-
- const TInputPath * GetInputPath(void);
-
- itkSetMacro(Value, OutputImagePixelType);
- itkGetConstReferenceMacro(Value, OutputImagePixelType);
-
- /** Set and Get direction value */
- itkSetMacro(Direction, unsigned int);
- itkGetConstMacro(Direction, unsigned int);
-
- void GenerateOutputInformation() override;
- void GenerateInputRequestedRegion() override;
-
-protected:
- AddCarvingPathFilter();
- ~AddCarvingPathFilter() override {}
-
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- void GenerateData() override;
-
-private:
- AddCarvingPathFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- OutputImagePixelType m_Value;
- unsigned int m_Direction;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbAddCarvingPathFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.hxx b/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.hxx
deleted file mode 100644
index 5864bc0917135aa882a10265d23c3d21ed8a57cf..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbAddCarvingPathFilter.hxx
+++ /dev/null
@@ -1,278 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#ifndef otbAddCarvingPathFilter_hxx
-#define otbAddCarvingPathFilter_hxx
-
-#include "otbAddCarvingPathFilter.h"
-#include "itkMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::AddCarvingPathFilter()
-{
- m_Value = static_cast<OutputImagePixelType>(255.0);
- m_Direction = 0;
-}
-/**
- * Main computation method.
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-inline void
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::SetInputPath(const TInputPath * path)
-{
- this->SetPathInput(path);
-}
-template <class TInputImage, class TInputPath, class TOutputImage>
-const TInputPath *
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GetInputPath(void)
-{
- return this->GetPathInput();
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GenerateData(void)
-{
-
- const InputImageType * inputImage = this->GetImageInput();
- const InputPathType * inputPath = this->GetPathInput();
- OutputImageType * outputImage = this->GetOutput();
-
- outputImage->SetBufferedRegion(outputImage->GetRequestedRegion());
- outputImage->Allocate();
-
- InputIteratorType inputIterator(inputImage,
- inputImage->GetLargestPossibleRegion());
- OutputIteratorType outputIterator(outputImage,
- outputImage->GetLargestPossibleRegion());
-
- unsigned int dir0;
- unsigned int dir1;
-
- if (m_Direction == 0)
- {
- dir0 = 0;
- dir1 = 1;
- }
- else
- {
- dir0 = 1;
- dir1 = 0;
- }
-
- inputIterator.SetFirstDirection(dir0);
- inputIterator.SetSecondDirection(dir1);
- inputIterator.GoToBegin();
- outputIterator.SetFirstDirection(dir0);
- outputIterator.SetSecondDirection(dir1);
- outputIterator.GoToBegin();
-
- int line = -1;
- typename InputImageType::IndexType index;
- typename InputPathType::VertexListType::ConstPointer vertexList = inputPath->GetVertexList();
- typename InputPathType::VertexListType::ConstIterator pathIterator;
- typename InputImageType::IndexType indexToAdd;
- typedef typename InputImageType::IndexType::IndexValueType IndexValueType;
-
- typename InputImageType::SizeType inputSize;
- inputSize = inputImage->GetLargestPossibleRegion().GetSize();
-
- //go to the end of the path
- pathIterator = vertexList->Begin();
- while (pathIterator != vertexList->End())
- {
- ++pathIterator;
- }
- --pathIterator;
-
- while (!outputIterator.IsAtEnd())
- {
- while (!outputIterator.IsAtEndOfSlice())
- {
- bool flag = false;
- while (!outputIterator.IsAtEndOfLine())
- {
- index = outputIterator.GetIndex();
-
- if (index[dir1] != line)
- {
- line = index[dir1];
- typename InputImageType::PointType tmpIndex;
- inputImage->TransformContinuousIndexToPhysicalPoint(pathIterator.Value(), tmpIndex);
- inputImage->TransformPhysicalPointToIndex(tmpIndex, indexToAdd);
- if (pathIterator != vertexList->Begin())
- {
- --pathIterator;
- }
- if (index[dir1] != indexToAdd[dir1])
- {
- itkExceptionMacro(<< "Error : " << index[dir1] << " , " << indexToAdd[dir1]);
- }
- }
-
- if ((flag == true)
- || ((index[dir0] != indexToAdd[dir0])
- && (index[dir0] < static_cast<IndexValueType>(inputSize[dir0]))))
- {
- outputIterator.Set(inputIterator.Get());
- ++inputIterator;
- }
- else
- {
- flag = true;
- OutputImagePixelType newValue = itk::NumericTraits<OutputImagePixelType>::Zero;
- int n = 0;
- InputIteratorType tmpIterator = inputIterator;
- --tmpIterator;
- if (!tmpIterator.IsAtReverseEndOfLine())
- {
- newValue = tmpIterator.Get();
- ++n;
- }
- tmpIterator = inputIterator;
- ++tmpIterator;
- if (!tmpIterator.IsAtEndOfLine())
- {
- newValue += tmpIterator.Get();
- ++n;
- }
- assert(n != 0);
- newValue /= n;
- outputIterator.Set(newValue);
- }
- ++outputIterator;
-
- }
-
- if ((outputIterator.GetIndex())[dir0] != (inputIterator.GetIndex())[dir0] + 1)
- {
- itkExceptionMacro(<< "Error 2: " << (outputIterator.GetIndex())[dir0] << " , "
- << (inputIterator.GetIndex())[dir0]);
- }
- inputIterator.NextLine();
- outputIterator.NextLine();
- }
- inputIterator.NextSlice();
- outputIterator.NextSlice();
- }
-
-}
-
-/**
- * Printself Method
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Path Value: " << m_Value << std::endl;
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GenerateOutputInformation()
-{
- // call the superclass' implementation of this method
- Superclass::GenerateOutputInformation();
-
- // get pointers to the input and output
- typename Superclass::InputImageConstPointer inputPtr = this->GetInput();
- typename Superclass::OutputImagePointer outputPtr = this->GetOutput();
-
- unsigned int dir0;
- //unsigned int dir1;
-
- if (m_Direction == 0)
- {
- dir0 = 0;
- //dir1 = 1;
- }
- else
- {
- dir0 = 1;
- //dir1 = 0;
- }
-
- // we need to compute the output spacing, the output image size, and the
- // output image start index
- const typename TInputImage::SpacingType&
- inputSpacing = inputPtr->GetSignedSpacing();
- const typename TInputImage::SizeType& inputSize
- = inputPtr->GetLargestPossibleRegion().GetSize();
- const typename TInputImage::IndexType& inputStartIndex
- = inputPtr->GetLargestPossibleRegion().GetIndex();
-
- typename TOutputImage::SpacingType outputSpacing;
- typename TOutputImage::SizeType outputSize;
- typename TOutputImage::IndexType outputStartIndex;
-
- for (unsigned int i = 0; i < TOutputImage::ImageDimension; ++i)
- {
- outputSpacing[i] = inputSpacing[i];
- outputSize[i] = (unsigned int) (inputSize[i]);
- outputStartIndex[i] = inputStartIndex[i];
- }
- // we remove one column of the image
- outputSize[dir0] = inputSize[dir0] + 1;
-
- outputPtr->SetSignedSpacing(outputSpacing);
-
- typename TOutputImage::RegionType outputLargestPossibleRegion;
- outputLargestPossibleRegion.SetSize(outputSize);
- outputLargestPossibleRegion.SetIndex(outputStartIndex);
-
- outputPtr->SetLargestPossibleRegion(outputLargestPossibleRegion);
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-AddCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GenerateInputRequestedRegion()
-{
- // call the superclass' implementation of this method
- Superclass::GenerateInputRequestedRegion();
- // get pointers to the input and output
- InputImagePointer inputPtr =
- const_cast<InputImageType *>(this->GetInput());
- if (!inputPtr)
- {
- itkExceptionMacro(<< "Input has not been set.");
- }
-
- inputPtr->SetRequestedRegion(inputPtr->GetLargestPossibleRegion());
-
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.h b/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.h
deleted file mode 100644
index ad9142b72266dec5ef435f97e972d8adb24f574e..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.h
+++ /dev/null
@@ -1,116 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToCarvingPathFilter_h
-#define otbImageToCarvingPathFilter_h
-
-#include "otbImageToPathFilter.h"
-#include "itkImageSliceConstIteratorWithIndex.h"
-
-namespace otb
-{
-/**
- * \class ImageToCarvingPathFilter
- * \brief This filter find the minimum energy path of an image.
- *
- * This filter find the minimum energy path from top to bottom of
- * the image (if Direction is set to 0) or from left to right
- * (if direction is set to 1).
- *
- * This is one component necessary to apply the seam carving algorithm
- * published by Shai Avidan, Ariel Shamir,
- * Seam Carving for Content-Aware Image Resizing,
- * ACM Transactions on Graphics, Volume 26, Number 3,
- * SIGGRAPH 2007
- *
- * \par INPUTS
- * The input is an image, typically the output of a gradient filter.
- *
- * \par OUTPUTS
- * The output is
- * a polyline parametric path comprising one and only one pixel per line
- * (resp. column) if direction is 0 (resp. 1).
- *
- * \sa RemoveCarvingPathFilter
- *
- * \ingroup PathFilters
- * \ingroup ImageFilters
- *
- * \ingroup OTBSeamCarving
- */
-
-template <class TInputImage, class TOutputPath>
-class ITK_EXPORT ImageToCarvingPathFilter
- : public ImageToPathFilter<TInputImage, TOutputPath>
-{
-public:
- /** standards typedefs */
- typedef ImageToCarvingPathFilter Self;
- typedef ImageToPathFilter<TInputImage, TOutputPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /// Creation through the object factory
- itkNewMacro(Self);
- /// Runtime information
- itkTypeMacro(ImageToCarvingPathFilter, ImageToPathFilter);
-
- /// Template parameters typedef
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::InputImagePointerType InputImagePointerType;
- typedef typename Superclass::OutputPathType OutputPathType;
- typedef typename Superclass::OutputPathPointerType OutputPathPointerType;
-
- typedef typename InputImageType::PixelType PixelType;
-
- /** Set and Get foreground value */
- itkSetMacro(ForegroundValue, PixelType);
- itkGetConstMacro(ForegroundValue, PixelType);
-
- /** Set and Get direction value */
- itkSetMacro(Direction, unsigned int);
- itkGetConstMacro(Direction, unsigned int);
-
- /** Get EnergyPerPix value */
- itkGetConstMacro(EnergyPerPix, double);
-
-protected:
- ImageToCarvingPathFilter();
- ~ImageToCarvingPathFilter() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- void GenerateOutputInformation() override {} //does nothing
- void GenerateData() override;
-
-private:
- ImageToCarvingPathFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- PixelType m_ForegroundValue;
- unsigned int m_Direction;
- double m_EnergyPerPix;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbImageToCarvingPathFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.hxx b/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.hxx
deleted file mode 100644
index 11123630270d2e508b792d13397913d0b4c84bc3..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbImageToCarvingPathFilter.hxx
+++ /dev/null
@@ -1,262 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToCarvingPathFilter_hxx
-#define otbImageToCarvingPathFilter_hxx
-
-#include "otbImageToCarvingPathFilter.h"
-#include "otbMacro.h"
-#include "itkConstantPadImageFilter.h"
-#include "itkConstShapedNeighborhoodIterator.h"
-#include "itkImageRegionConstIterator.h"
-#include "itkNumericTraits.h"
-#include "itkImageLinearConstIteratorWithIndex.h"
-
-namespace otb
-{
-/*
- * Constructor.
- */
-template <class TInputImage, class TOutputPath>
-ImageToCarvingPathFilter<TInputImage, TOutputPath>
-::ImageToCarvingPathFilter()
-{
- m_ForegroundValue = PixelType(255);
- m_Direction = 0;
- m_EnergyPerPix = 0.0;
-}
-
-/**
- * Main computation method.
- */
-template <class TInputImage, class TOutputPath>
-void
-ImageToCarvingPathFilter<TInputImage, TOutputPath>
-::GenerateData(void)
-{
-
- const InputImageType * inputImage = this->GetInput();
- OutputPathType * outputPath = this->GetOutput();
-
- typedef itk::ImageSliceConstIteratorWithIndex
- <InputImageType> IteratorType;
- typedef itk::NeighborhoodIterator<InputImageType>
- NeighborhoodIteratorType;
-
- IteratorType it(inputImage,
- inputImage->GetLargestPossibleRegion());
- it.GoToBegin();
-
- PixelType maxValue = itk::NumericTraits<PixelType>::max();
-
- typename InputImageType::Pointer energyImage = InputImageType::New();
- energyImage->SetRegions(inputImage->GetLargestPossibleRegion());
- energyImage->Allocate();
-
- typename NeighborhoodIteratorType::RadiusType radius;
- radius.Fill(1);
- NeighborhoodIteratorType neighIt(radius, energyImage,
- energyImage->GetLargestPossibleRegion());
- neighIt.GoToBegin();
-
- unsigned int dir0;
- unsigned int dir1;
-
- typename IteratorType::OffsetType UP0;
- typename IteratorType::OffsetType UP1;
- typename IteratorType::OffsetType UP2;
- typename IteratorType::OffsetType NEXT;
-
- const typename IteratorType::OffsetType LEFT = {{-1, 0}};
- const typename IteratorType::OffsetType RIGHT = {{1, 0}};
- const typename IteratorType::OffsetType UP = {{0, -1}};
- const typename IteratorType::OffsetType DOWN = {{0, 1}};
- const typename IteratorType::OffsetType LEFTUP = {{-1, -1}};
-// const typename IteratorType::OffsetType RIGHTDOWN ={{1, 1}};
- const typename IteratorType::OffsetType RIGHTUP = {{1, -1}};
- const typename IteratorType::OffsetType LEFTDOWN = {{-1, 1}};
-// const typename IteratorType::OffsetType CENTER ={{0, 0}};
-
- if (m_Direction == 0)
- {
- dir0 = 0;
- dir1 = 1;
- UP0 = LEFTUP;
- UP1 = UP;
- UP2 = RIGHTUP;
- NEXT = DOWN;
- }
- else
- {
- dir0 = 1;
- dir1 = 0;
- UP0 = LEFTUP;
- UP1 = LEFT;
- UP2 = LEFTDOWN;
- NEXT = RIGHT;
- }
-
- /** Compute the energy image top-down or left-right
- * with cumulative energy (dynamic programming first step) */
- it.SetFirstDirection(dir0);
- it.SetSecondDirection(dir1);
- it.GoToBegin();
- neighIt.GoToBegin();
- while (!it.IsAtEnd())
- {
- while (!it.IsAtEndOfSlice())
- {
- while (!it.IsAtEndOfLine())
- {
- neighIt.SetLocation(it.GetIndex()); //TODO bad for performances... find a better option
- // this is really about 20% of total processing time !!!
-
- PixelType min = maxValue;
- bool isInside = false;
- bool flag = false;
- if (neighIt.GetPixel(UP0, isInside) < min)
- {
- if (isInside)
- {
- min = neighIt.GetPixel(UP0);
- flag = true;
- }
- }
- if (neighIt.GetPixel(UP1, isInside) < min)
- {
- if (isInside)
- {
- min = neighIt.GetPixel(UP1);
- flag = true;
- }
- }
- if (neighIt.GetPixel(UP2, isInside) < min)
- {
- if (isInside)
- {
- min = neighIt.GetPixel(UP2);
- flag = true;
- }
- }
-
- if (!flag) //no previous value
- {
- min = 0;
- }
-
- PixelType newValue = it.Get() + min;
- neighIt.SetCenterPixel(newValue);
-
- ++it;
-
- }
- it.NextLine();
- }
- it.NextSlice();
- }
-
- /** Follow the minima bottom-up or right-left
- * (dynamic programming second step) */
-
- //find the starting point to follow on the last line
- typedef itk::ImageLinearConstIteratorWithIndex<InputImageType>
- LinearIteratorType;
-
- LinearIteratorType LinIt(energyImage,
- energyImage->GetLargestPossibleRegion());
- LinIt.SetDirection(dir0);
- LinIt.GoToReverseBegin();
- typedef typename InputImageType::IndexType IndexType;
-
- PixelType min = maxValue;
- IndexType indexToAdd;
- while (!LinIt.IsAtReverseEndOfLine())
- {
- if (LinIt.Get() < min)
- {
- min = LinIt.Get();
- indexToAdd = LinIt.GetIndex();
- }
- --LinIt;
- }
- outputPath->AddVertex(indexToAdd);
- m_EnergyPerPix = ((double) min) / (inputImage->GetLargestPossibleRegion().GetSize())[dir1];
-
- //follow the min
- neighIt.SetLocation(indexToAdd);
- bool flag = true;
- while (flag)
- {
- flag = false;
- PixelType minValue = maxValue;
- IndexType indexToAdd2;
- bool isInside = false;
-
- if (neighIt.GetPixel(UP0, isInside) < min)
- {
- if (isInside)
- {
- minValue = neighIt.GetPixel(UP0);
- indexToAdd2 = neighIt.GetIndex(UP0);
- flag = true;
- }
- }
-
- if (neighIt.GetPixel(UP1, isInside) < minValue)
- {
- if (isInside)
- {
- minValue = neighIt.GetPixel(UP1);
- indexToAdd2 = neighIt.GetIndex(UP1);
- flag = true;
- }
- }
-
- if (neighIt.GetPixel(UP2, isInside) < minValue)
- {
- if (isInside)
- {
- minValue = neighIt.GetPixel(UP2);
- indexToAdd2 = neighIt.GetIndex(UP2);
- flag = true;
- }
- }
-
- if (flag)
- {
- outputPath->AddVertex(indexToAdd2);
- neighIt.SetLocation(indexToAdd2);
- }
-
- }
-
-}
-
-template <class TInputImage, class TOutputPath>
-void
-ImageToCarvingPathFilter<TInputImage, TOutputPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << "Foreground value : " << m_ForegroundValue << std::endl;
-}
-} // end namespace otb
-
-#endif
diff --git a/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.h b/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.h
deleted file mode 100644
index c503944f713ee8a93ea76f5eb209557ee829ea45..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.h
+++ /dev/null
@@ -1,141 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRemoveCarvingPathFilter_h
-#define otbRemoveCarvingPathFilter_h
-
-#include "itkImageAndPathToImageFilter.h"
-#include "itkImageSliceIteratorWithIndex.h"
-
-namespace otb
-{
-/** \class RemoveCarvingPathFilter
- * \brief This class remove pixels given in one path
- *
- *
- *
- * This filter remove pixels found by the otb::ImageToCarvingPathFilter
- * thus decreasing the image size.
- * the image (if Direction is set to 0) or from left to right
- * (if direction is set to 1).
- *
- * This is one component necessary to apply the seam carving algorithm
- * published by Shai Avidan, Ariel Shamir,
- * Seam Carving for Content-Aware Image Resizing,
- * ACM Transactions on Graphics, Volume 26, Number 3,
- * SIGGRAPH 2007
- *
- * \par INPUTS
- * The first input is an image, usually, the same one provided to the
- * otb::ImageToCarvingPathFilter
- * The second input is a path, typically the output of otb::ImageToCarvingPathFilter.
- *
- * \par OUTPUTS
- * The output is an image with a smaller size than the input image. There is one less
- * column if direction is 0 and one less line if direction is 1.
- *
- * \sa ImageToCarvingPathFilter
- *
- *
- * \ingroup PathFilters
- * \ingroup ImageFilters
- *
- * \ingroup OTBSeamCarving
- */
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-class ITK_EXPORT RemoveCarvingPathFilter : public itk::ImageAndPathToImageFilter<TInputImage, TInputPath, TOutputImage>
-{
-public:
- /** Standard class typedefs. */
- typedef RemoveCarvingPathFilter Self;
- typedef itk::ImageAndPathToImageFilter<TInputImage, TInputPath, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(RemoveCarvingPathFilter, itk::ImageAndPathToImageFilter);
-
- /** Some convenient typedefs. */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::Pointer InputImagePointer;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::RegionType InputImageRegionType;
- typedef typename InputImageType::PixelType InputImagePixelType;
- typedef TInputPath InputPathType;
- typedef typename InputPathType::Pointer InputPathPointer;
- typedef typename InputPathType::ConstPointer InputPathConstPointer;
- typedef typename InputPathType::InputType InputPathInputType;
- typedef typename InputPathType::OutputType InputPathOutputType;
- typedef typename InputPathType::IndexType InputPathIndexType;
- typedef typename InputPathType::OffsetType InputPathOffsetType;
- typedef TOutputImage OutputImageType;
- typedef typename OutputImageType::Pointer OutputImagePointer;
- typedef typename OutputImageType::ConstPointer OutputImageConstPointer;
-
- typedef typename OutputImageType::RegionType OutputImageRegionType;
- typedef typename OutputImageType::PixelType OutputImagePixelType;
- typedef typename OutputImageType::ValueType OutputImageValueType;
-
-// typedef typename itk::ImageRegionConstIterator<InputImageType> InputIteratorType;
-// typedef typename itk::ImageRegionIterator<OutputImageType> OutputIteratorType;
- typedef typename itk::ImageSliceConstIteratorWithIndex<InputImageType> InputIteratorType;
- typedef typename itk::ImageSliceIteratorWithIndex<OutputImageType> OutputIteratorType;
-
- /** Set/Get the path input of this process object.
- Note: these methods are adding to get the proper name */
- void SetInputPath(const TInputPath * path);
-
- const TInputPath * GetInputPath(void);
-
- itkSetMacro(Value, OutputImagePixelType);
- itkGetConstReferenceMacro(Value, OutputImagePixelType);
-
- /** Set and Get direction value */
- itkSetMacro(Direction, unsigned int);
- itkGetConstMacro(Direction, unsigned int);
-
- void GenerateOutputInformation() override;
-
-protected:
- RemoveCarvingPathFilter();
- ~RemoveCarvingPathFilter() override {}
-
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- void GenerateData() override;
-
-private:
- RemoveCarvingPathFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- OutputImagePixelType m_Value;
- unsigned int m_Direction;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRemoveCarvingPathFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.hxx b/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.hxx
deleted file mode 100644
index 46640119ef2d1a78837cc0d9ab133ba0fb6a137e..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/include/otbRemoveCarvingPathFilter.hxx
+++ /dev/null
@@ -1,224 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#ifndef otbRemoveCarvingPathFilter_hxx
-#define otbRemoveCarvingPathFilter_hxx
-
-#include "otbRemoveCarvingPathFilter.h"
-#include "itkMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::RemoveCarvingPathFilter()
-{
- m_Value = static_cast<OutputImagePixelType>(255.0);
- m_Direction = 0;
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-inline void
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::SetInputPath(const TInputPath * path)
-{
- this->SetPathInput(path);
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-const TInputPath *
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GetInputPath(void)
-{
- return this->GetPathInput();
-}
-
-/**
- * Main computation method.
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GenerateData(void)
-{
-
- const InputImageType * inputImage = this->GetImageInput();
- const InputPathType * inputPath = this->GetPathInput();
- OutputImageType * outputImage = this->GetOutput();
-
- outputImage->SetBufferedRegion(outputImage->GetRequestedRegion());
- outputImage->Allocate();
-
- InputIteratorType inputIterator(inputImage,
- inputImage->GetLargestPossibleRegion());
- OutputIteratorType outputIterator(outputImage,
- outputImage->GetLargestPossibleRegion());
-
- unsigned int dir0;
- unsigned int dir1;
-
- if (m_Direction == 0)
- {
- dir0 = 0;
- dir1 = 1;
- }
- else
- {
- dir0 = 1;
- dir1 = 0;
- }
-
- inputIterator.SetFirstDirection(dir0);
- inputIterator.SetSecondDirection(dir1);
- inputIterator.GoToBegin();
- outputIterator.SetFirstDirection(dir0);
- outputIterator.SetSecondDirection(dir1);
- outputIterator.GoToBegin();
-
- int line = -1;
- typename InputImageType::IndexType index;
- typename InputPathType::VertexListType::ConstPointer vertexList = inputPath->GetVertexList();
- typename InputPathType::VertexListType::ConstIterator pathIterator;
- typename InputImageType::IndexType indexToRemove;
-
- //go to the end of the path
- pathIterator = vertexList->Begin();
- while (pathIterator != vertexList->End())
- {
- ++pathIterator;
- }
- --pathIterator;
-
- while (!inputIterator.IsAtEnd())
- {
- while (!inputIterator.IsAtEndOfSlice())
- {
- while (!inputIterator.IsAtEndOfLine())
- {
- index = inputIterator.GetIndex();
-
- if (index[dir1] != line)
- {
- line = index[dir1];
- typename InputImageType::PointType tmpIndex;
- inputImage->TransformContinuousIndexToPhysicalPoint(pathIterator.Value(), tmpIndex);
- inputImage->TransformPhysicalPointToIndex(tmpIndex, indexToRemove);
-
- if (pathIterator != vertexList->Begin())
- {
- --pathIterator;
- }
- if (index[dir1] != indexToRemove[dir1])
- {
- itkExceptionMacro(<< "Error!!!");
- }
- }
- if (index[dir0] != indexToRemove[dir0])
- {
- outputIterator.Set(inputIterator.Get());
- ++outputIterator;
- }
- ++inputIterator;
- }
- inputIterator.NextLine();
- outputIterator.NextLine();
- }
- inputIterator.NextSlice();
- outputIterator.NextSlice();
- }
-
-}
-
-/**
- * Printself Method
- */
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Path Value: " << m_Value << std::endl;
-}
-
-template <class TInputImage, class TInputPath, class TOutputImage>
-void
-RemoveCarvingPathFilter<TInputImage, TInputPath, TOutputImage>
-::GenerateOutputInformation()
-{
- // call the superclass' implementation of this method
- Superclass::GenerateOutputInformation();
-
- // get pointers to the input and output
- typename Superclass::InputImageConstPointer inputPtr = this->GetInput();
- typename Superclass::OutputImagePointer outputPtr = this->GetOutput();
-
- unsigned int dir0;
- //unsigned int dir1;
-
- if (m_Direction == 0)
- {
- dir0 = 0;
- //dir1 = 1;
- }
- else
- {
- dir0 = 1;
- //dir1 = 0;
- }
-
- // we need to compute the output spacing, the output image size, and the
- // output image start index
- const typename TInputImage::SpacingType&
- inputSpacing = inputPtr->GetSignedSpacing();
- const typename TInputImage::SizeType& inputSize
- = inputPtr->GetLargestPossibleRegion().GetSize();
- const typename TInputImage::IndexType& inputStartIndex
- = inputPtr->GetLargestPossibleRegion().GetIndex();
-
- typename TOutputImage::SpacingType outputSpacing;
- typename TOutputImage::SizeType outputSize;
- typename TOutputImage::IndexType outputStartIndex;
-
- for (unsigned int i = 0; i < TOutputImage::ImageDimension; ++i)
- {
- outputSpacing[i] = inputSpacing[i];
- outputSize[i] = (unsigned int) (inputSize[i]);
- outputStartIndex[i] = inputStartIndex[i];
- }
- // we remove one column of the image
- outputSize[dir0] = inputSize[dir0] - 1;
-
- outputPtr->SetSignedSpacing(outputSpacing);
-
- typename TOutputImage::RegionType outputLargestPossibleRegion;
- outputLargestPossibleRegion.SetSize(outputSize);
- outputLargestPossibleRegion.SetIndex(outputStartIndex);
-
- outputPtr->SetLargestPossibleRegion(outputLargestPossibleRegion);
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Feature/SeamCarving/otb-module.cmake b/Modules/Feature/SeamCarving/otb-module.cmake
deleted file mode 100644
index d0f0c8465d5031e2097b607a671cbfe534636d43..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/otb-module.cmake
+++ /dev/null
@@ -1,38 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "This module contains necessary components to apply the seam
-carving algorithm published by Shai Avidan, Ariel Shamir, Seam Carving for
-Content-Aware Resizing, ACM Transactions on Graphics, Volume 26, Number 3, SIGGRAPH
-2007.")
-
-otb_module(OTBSeamCarving
- DEPENDS
- OTBPath
- OTBCommon
- OTBITK
-
- TEST_DEPENDS
- OTBTestKernel
- OTBImageBase
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Feature/SeamCarving/test/CMakeLists.txt b/Modules/Feature/SeamCarving/test/CMakeLists.txt
deleted file mode 100644
index f8775d775c5a1ca807d63b5504e0a58401cae263..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/test/CMakeLists.txt
+++ /dev/null
@@ -1,32 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBSeamCarvingTests
-otbSeamCarvingTestDriver.cxx
-)
-
-add_executable(otbSeamCarvingTestDriver ${OTBSeamCarvingTests})
-target_link_libraries(otbSeamCarvingTestDriver ${OTBSeamCarving-Test_LIBRARIES})
-otb_module_target_label(otbSeamCarvingTestDriver)
-
-# Tests Declaration
-
diff --git a/Modules/Feature/SeamCarving/test/otbSeamCarvingTestDriver.cxx b/Modules/Feature/SeamCarving/test/otbSeamCarvingTestDriver.cxx
deleted file mode 100644
index fb60f6825789081e61c2b52bad4e851b9758170f..0000000000000000000000000000000000000000
--- a/Modules/Feature/SeamCarving/test/otbSeamCarvingTestDriver.cxx
+++ /dev/null
@@ -1,25 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
-}
diff --git a/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.h b/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.h
deleted file mode 100644
index 6d8d3fb4e696f8ff9d426f83133276001766e4b6..0000000000000000000000000000000000000000
--- a/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.h
+++ /dev/null
@@ -1,94 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBinaryImageMinimalBoundingRegionCalculator_h
-#define otbBinaryImageMinimalBoundingRegionCalculator_h
-
-#include "itkImageToImageFilter.h"
-#include "itkObjectFactory.h"
-
-namespace otb
-{
-/**
- * \class BinaryImageMinimalBoundingRegionCalculator
- * \brief This class compute the smallest region of the image
- * containing every pixel with the foreground value.
- *
- * This class is used for instance in the RCC8 calculator filter,
- * where the input region used for computation has to be the smallest possible
- * for costs reasons. The Pad arg allows the user to get a region of pad pixel larger
- * at each bound in case a security margin has to be kept.
- *
- * \sa ImageToImageRCC8Calculator
- *
- * \ingroup OTBImageManipulation
- */
-template <class TInputImage>
-class ITK_EXPORT BinaryImageMinimalBoundingRegionCalculator
- : public itk::ImageToImageFilter<TInputImage, TInputImage>
-{
-public:
- /** Standard typedefs */
- typedef BinaryImageMinimalBoundingRegionCalculator Self;
- typedef itk::ImageToImageFilter<TInputImage, TInputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(BinaryImageMinimalBoundingRegionCalculator, ImageToImageFilter);
-
- typedef TInputImage InputImageType;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::RegionType RegionType;
- typedef typename InputImageType::Pointer InputImagePointerType;
- /** Toogle the pad option */
- itkGetMacro(Region, RegionType);
- itkSetMacro(InsideValue, PixelType);
- itkGetMacro(InsideValue, PixelType);
- itkSetMacro(Pad, unsigned int);
- itkGetMacro(Pad, unsigned int);
-
-protected:
- /** Constructor */
- BinaryImageMinimalBoundingRegionCalculator();
- /** Destructor */
- ~BinaryImageMinimalBoundingRegionCalculator() override {}
- /** Main computation method */
- void GenerateData(void) override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-private:
- BinaryImageMinimalBoundingRegionCalculator(const Self &) = delete;
- void operator =(const Self&) = delete;
- /** The computed region */
- RegionType m_Region;
- /** Toogle if pad wanted */
- unsigned int m_Pad;
- /** Inside value */
- PixelType m_InsideValue;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbBinaryImageMinimalBoundingRegionCalculator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.hxx b/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.hxx
deleted file mode 100644
index cfe5d95b6b9d8099421302cab87764d99d84e8a3..0000000000000000000000000000000000000000
--- a/Modules/Filtering/ImageManipulation/include/otbBinaryImageMinimalBoundingRegionCalculator.hxx
+++ /dev/null
@@ -1,159 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBinaryImageMinimalBoundingRegionCalculator_hxx
-#define otbBinaryImageMinimalBoundingRegionCalculator_hxx
-
-#include "otbBinaryImageMinimalBoundingRegionCalculator.h"
-#include "itkImageSliceConstIteratorWithIndex.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/*
- * Constructor
- */
-template <class TInputImage>
-BinaryImageMinimalBoundingRegionCalculator<TInputImage>
-::BinaryImageMinimalBoundingRegionCalculator()
-{
- // The pad option is desactivated by default
- m_Pad = 0;
- // Set the default region
- typename InputImageType::SizeType size;
- typename InputImageType::IndexType index;
- size[0] = 0;
- size[1] = 0;
- index[0] = 0;
- index[1] = 0;
- m_Region.SetSize(size);
- m_Region.SetIndex(index);
- m_InsideValue = static_cast<PixelType>(255);
-}
-/**
- * Main computation method
- */
-template <class TInputImage>
-void
-BinaryImageMinimalBoundingRegionCalculator<TInputImage>
-::GenerateData(void)
-{
- // Input images pointers
- const InputImageType* image = this->GetInput();
- // Iterator definition
- typedef itk::ImageSliceConstIteratorWithIndex<InputImageType> SliceIteratorType;
- // Indexes containing upper-left and lower-right corner
- typename InputImageType::IndexType min;
- typename InputImageType::IndexType max;
- min[0] = 0;
- min[1] = 0;
- max[1] = 0;
- max[1] = 0;
- for (unsigned int axis = 0; axis < InputImageType::ImageDimension; ++axis)
- { // Create the forward iterator to find lower bound
- SliceIteratorType fit(image, image->GetLargestPossibleRegion());
-
- fit.SetFirstDirection(!axis);
- fit.SetSecondDirection(axis);
- fit.GoToBegin();
-
- // Walk through the two images line by line
- while (!fit.IsAtEnd())
- {
- while (!fit.IsAtEndOfSlice())
- {
- while (!fit.IsAtEndOfLine())
- {
- // If a common intersection is found
- if (fit.Get() == m_InsideValue)
- {
- // then the lower bound is found
- min[axis] = fit.GetIndex()[axis];
- fit.GoToReverseBegin(); // skip to the end
- break;
- }
- ++fit;
- }
- fit.NextLine();
- }
- fit.NextSlice();
- }
- // Create the reverse iterator to find upper bound
- SliceIteratorType rit(image, image->GetLargestPossibleRegion());
- rit.SetFirstDirection(!axis);
- rit.SetSecondDirection(axis);
- rit.GoToReverseBegin();
- // Walk through the two images line by line
- while (!rit.IsAtReverseEnd())
- {
- while (!rit.IsAtReverseEndOfSlice())
- {
- while (!rit.IsAtReverseEndOfLine())
- {
- // If a common intersection is found
- if (rit.Get() == m_InsideValue)
- {
- max[axis] = rit.GetIndex()[axis];
- rit.GoToBegin(); //Skip to reverse end
- break;
- }
- --rit;
-
- }
- rit.PreviousLine();
-
- }
- rit.PreviousSlice();
- }
- }
-
- typename InputImageType::SizeType size;
- typename InputImageType::IndexType index;
-
- for (unsigned int i = 0; i < InputImageType::ImageDimension; ++i)
- {
- size[i] = max[i] - min[i] + 1;
- index[i] = min[i];
- }
-
- m_Region.SetIndex(index);
- m_Region.SetSize(size);
-
- if (m_Pad)
- {
- m_Region.PadByRadius(m_Pad);
- }
-
- m_Region.Crop(image->GetLargestPossibleRegion());
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage>
-void
-BinaryImageMinimalBoundingRegionCalculator<TInputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // End namespace otb
-
-#endif
diff --git a/Modules/Filtering/ImageManipulation/test/CMakeLists.txt b/Modules/Filtering/ImageManipulation/test/CMakeLists.txt
index e8317ea3781b71aeff5124c768480cea1b8efd5c..53e76737f0b54cf6717ef348095b401642d630c8 100644
--- a/Modules/Filtering/ImageManipulation/test/CMakeLists.txt
+++ b/Modules/Filtering/ImageManipulation/test/CMakeLists.txt
@@ -51,7 +51,6 @@ otbVectorRescaleIntensityImageFilter.cxx
otbLog10ThresholdedImageFilterTest.cxx
otbExtractROIResample.cxx
otbLocalGradientVectorImageFilter.cxx
-otbBinaryImageMinimalBoundingRegionCalculator.cxx
otbPerBandVectorImageFilterWithSobelFilter.cxx
otbBinaryImageDensityFunction.cxx
otbThresholdVectorImageFilter.cxx
@@ -451,18 +450,6 @@ otb_add_test(NAME bfTvLocalGradientVectorImageFilter COMMAND otbImageManipulatio
${INPUTDATA}/cupriteSubHsi.tif
${TEMP}/bfTvLocalGradientVectorImageFilter.tif)
-otb_add_test(NAME bfTvBoundingRegionCalculator COMMAND otbImageManipulationTestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/bfBoundingRegionCalculatorOutput.txt
- ${TEMP}/bfBoundingRegionCalculatorOutput.txt
- otbBinaryImageMinimalBoundingRegionCalculator
- 4
- ${TEMP}/bfBoundingRegionCalculatorOutput.txt
- ${INPUTDATA}/rcc8_mire1.png
- ${INPUTDATA}/rcc8_mire2.png
- ${INPUTDATA}/rcc8_mire3.png
- ${INPUTDATA}/rcc8_mire4.png
- )
otb_add_test(NAME bfTvPerBandVectorImageFilterWithSobelFilter COMMAND otbImageManipulationTestDriver
--compare-image ${EPSILON_7}
diff --git a/Modules/Filtering/ImageManipulation/test/otbBinaryImageMinimalBoundingRegionCalculator.cxx b/Modules/Filtering/ImageManipulation/test/otbBinaryImageMinimalBoundingRegionCalculator.cxx
deleted file mode 100644
index 90d3167cbb890262026198319a4b781b9af99b73..0000000000000000000000000000000000000000
--- a/Modules/Filtering/ImageManipulation/test/otbBinaryImageMinimalBoundingRegionCalculator.cxx
+++ /dev/null
@@ -1,82 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbImage.h"
-#include "otbBinaryImageMinimalBoundingRegionCalculator.h"
-#include "otbImageFileReader.h"
-#include "otbImageList.h"
-
-int otbBinaryImageMinimalBoundingRegionCalculator(int itkNotUsed(argc), char* argv[])
-{
- const unsigned int Dimension = 2;
-
- int nbImages = atoi(argv[1]);
- char * outfile = argv[2];
-
- typedef unsigned char PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::BinaryImageMinimalBoundingRegionCalculator<ImageType>
- BoundingRegionCalculatorType;
- typedef BoundingRegionCalculatorType::RegionType RegionType;
- typedef otb::ImageList<ImageType> ImageListType;
- typedef ImageListType::Iterator IteratorType;
- // reference image list
- ImageListType::Pointer images = ImageListType::New();
-
- // Reading input images
- std::ofstream out;
- out.open(outfile, std::ios::out);
- out << "Test results from otbBinaryImageBoundingRegionCalculator test." << std::endl;
- for (int i = 1; i <= nbImages; ++i)
- {
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(argv[2 + i]);
- reader->Update();
- images->PushBack(reader->GetOutput());
- }
-
- // Declaration
- BoundingRegionCalculatorType::Pointer brct;
- // Computing bounding region for each image
- for (IteratorType it = images->Begin(); it != images->End(); ++it)
- {
- brct = BoundingRegionCalculatorType::New();
- brct->SetInput(it.Get());
- brct->Update();
- RegionType region = brct->GetRegion();
- out << region.GetIndex() << "\t" << region.GetSize() << std::endl;
- }
- out << std::endl << "Testing the pad option" << std::endl << std::endl;
- for (IteratorType it = images->Begin(); it != images->End(); ++it)
- {
- brct = BoundingRegionCalculatorType::New();
- brct->SetPad(1);
- brct->SetInput(it.Get());
- brct->Update();
- RegionType region = brct->GetRegion();
- out << region.GetIndex() << "\t" << region.GetSize() << std::endl;
- }
-
- out.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/ImageManipulation/test/otbImageManipulationTestDriver.cxx b/Modules/Filtering/ImageManipulation/test/otbImageManipulationTestDriver.cxx
index 98efbed44de03307f9ab8818fc8dcd85d67110a9..0b24cab0e47dd8544329617ada28fc1433a2897a 100644
--- a/Modules/Filtering/ImageManipulation/test/otbImageManipulationTestDriver.cxx
+++ b/Modules/Filtering/ImageManipulation/test/otbImageManipulationTestDriver.cxx
@@ -51,7 +51,6 @@ void RegisterTests()
REGISTER_TEST(otbLog10ThresholdedImageFilterTest);
REGISTER_TEST(otbExtractROIResample);
REGISTER_TEST(otbLocalGradientVectorImageFilterTest);
- REGISTER_TEST(otbBinaryImageMinimalBoundingRegionCalculator);
REGISTER_TEST(otbPerBandVectorImageFilterWithSobelFilter);
REGISTER_TEST(otbBinaryImageDensityFunction);
REGISTER_TEST(otbThresholdVectorImageFilterTest);
diff --git a/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.h b/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.h
deleted file mode 100644
index f04fbd9892dcfbc7f378e0bdd6efce28e586f366..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.h
+++ /dev/null
@@ -1,126 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbParserConditionDataNodeFeatureFunction_h
-#define otbParserConditionDataNodeFeatureFunction_h
-
-#include "otbDataNodeImageFunction.h"
-#include "otbPolyLineImageConstIterator.h"
-#include "otbMaskMuParserFunctor.h"
-#include <string>
-
-namespace otb
-{
-/** \class ParserConditionDataNodeFeatureFunction
- * \brief Compute a ParserCondition based feature alongside a
- * datanode.
- *
- * This function evaluate a condition alongside a datanode.
- * The descriptor is the percentage of pixels iterated for which
- * the condition is true.
- *
- * \ingroup Functions
- * \sa DataNodeImageFunction
- * \sa SpectralAngleDataNodeFeatureFunction
- *
- * \ingroup OTBMathParser
- */
-
-template <
-class TImage,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT ParserConditionDataNodeFeatureFunction :
- public DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
-{
-public:
- /** Standard class typedefs. */
- typedef ParserConditionDataNodeFeatureFunction Self;
- typedef DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(ParserConditionDataNodeFeatureFunction, DataNodeImageFunction);
-
- /** Some typedefs. */
- typedef typename Superclass::DataNodeType DataNodeType;
- typedef typename DataNodeType::LineType LineType;
-
- typedef TImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::InternalPixelType ScalarRealType;
- typedef typename InputImageType::IndexType IndexType;
- typedef typename InputImageType::IndexValueType IndexValueType;
-
- typedef TCoordRep CoordRepType;
-
- typedef TPrecision PrecisionType;
-
- typedef PolyLineImageConstIterator<InputImageType, LineType>
- ImageLineIteratorType;
-
- typedef Functor::MaskMuParserFunctor<PixelType> ParserConditionFunctorType;
- typedef typename ParserConditionFunctorType::Pointer ParserConditionFunctorPointer;
-
- typedef std::vector<PrecisionType> OutputType;
-
- OutputType Evaluate( const DataNodeType& node ) const override;
-
- std::string GetExpression() const
- {
- return m_ParserConditionFunctor->GetExpression();
- }
-
- void SetExpression(std::string expression)
- {
- m_ParserConditionFunctor->SetExpression(expression);
- }
-
- void SetSpectralAngleReferencePixel(const PixelType& pixel)
- {
- m_ParserConditionFunctor->SetSpectralAngleReferencePixel(pixel);
- }
-
-protected:
- ParserConditionDataNodeFeatureFunction();
- ~ParserConditionDataNodeFeatureFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- ParserConditionDataNodeFeatureFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
- /** ParserCondition Functor */
- ParserConditionFunctorPointer m_ParserConditionFunctor;
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbParserConditionDataNodeFeatureFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.hxx b/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.hxx
deleted file mode 100644
index a32c38294f18b8a09a165f97bd7f347677813351..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MathParser/include/otbParserConditionDataNodeFeatureFunction.hxx
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbParserConditionDataNodeFeatureFunction_hxx
-#define otbParserConditionDataNodeFeatureFunction_hxx
-
-#include "otbParserConditionDataNodeFeatureFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TImage, class TCoordRep, class TPrecision>
-ParserConditionDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::ParserConditionDataNodeFeatureFunction()
-{
- m_ParserConditionFunctor = ParserConditionFunctorType::New();
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TImage, class TCoordRep, class TPrecision>
-void
-ParserConditionDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::PrintSelf( std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf( os, indent );
- //os << indent << "ParserCondition : " << m_ParserConditionFunctor << std::endl;
-}
-
-template <class TImage, class TCoordRep, class TPrecision>
-typename ParserConditionDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::OutputType
- ParserConditionDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::Evaluate( const DataNodeType& node ) const
-{
- // The parser evaluation can't be const since the parser state
- // changes at the first evaluation, but in fact we don't modify
- // anything here.
- // To fit with the rest of the framework, we try to keep the Evaluate
- // function const
- Self* _this = const_cast<Self*>(this);
- ParserConditionFunctorType& parser = *(_this->m_ParserConditionFunctor);
- // Ugly things over
-
-
- const typename ImageLineIteratorType::PathType* path;
-
- switch (node.GetNodeType())
- {
- case FEATURE_POINT:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- case FEATURE_LINE:
- {
- path = node.GetLine();
- break;
- }
- case FEATURE_POLYGON:
- {
- path = node.GetPolygonExteriorRing();
- break;
- }
- default:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- }
-
- ImageLineIteratorType lineIt(this->GetInputImage(), path);
- lineIt.GoToBegin();
-
- double nbValidPixel = 0.;
- double nbVisitedPixel = 0.;
-
- while(!lineIt.IsAtEnd())
- {
- if(this->IsInsideBuffer(lineIt.GetIndex()))
- {
- if( parser(this->GetInputImage()->GetPixel(lineIt.GetIndex())) )
- {
- nbValidPixel += 1;
- }
- nbVisitedPixel += 1;
- }
- ++lineIt;
- }
-
- OutputType output;
- if(nbVisitedPixel == 0)
- {
- output.push_back(static_cast<PrecisionType>(0.));
- }
- else
- {
- output.push_back(static_cast<PrecisionType>(nbValidPixel/nbVisitedPixel));
- }
-
- output.push_back(static_cast<PrecisionType>(nbValidPixel));
- output.push_back(static_cast<PrecisionType>(nbVisitedPixel));
- return output;
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Filtering/MathParser/test/CMakeLists.txt b/Modules/Filtering/MathParser/test/CMakeLists.txt
index 9f082865ac762f233a0383f097e990260d26203e..f2dbcdfd271d6eecd4f97d9e075847a7f49b85c3 100644
--- a/Modules/Filtering/MathParser/test/CMakeLists.txt
+++ b/Modules/Filtering/MathParser/test/CMakeLists.txt
@@ -23,7 +23,6 @@ otb_module_test()
set(OTBMathParserTests
otbMathParserTestDriver.cxx
otbMaskMuParserFilterTest.cxx
-otbParserConditionDataNodeFeatureFunction.cxx
otbParserTest.cxx
otbImageListToSingleImageFilterTest.cxx
otbBandMathImageFilter.cxx
@@ -48,32 +47,6 @@ otb_add_test(NAME bfTvMaskMuParserFilterTest COMMAND otbMathParserTestDriver
"(b1>100)*(b2>120)"
)
-otb_add_test(NAME bfTvParserConditionDataNodeFeatureFunction_Line_NDVI COMMAND otbMathParserTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/bfTvNDVIDataNodeFeatureFunctionOutput_Line.shp
- ${TEMP}/bfTvParserConditionDataNodeFeatureFunction_Line_NDVI.shp
- otbParserConditionDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvParserConditionDataNodeFeatureFunction_Line_NDVI.shp
- "ndvi(b3,b4) > 0.047"
- 0
- )
-
-otb_add_test(NAME bfTvParserConditionDataNodeFeatureFunction_Polygon_NDVI COMMAND otbMathParserTestDriver
- --compare-ogr ${EPSILON_6}
- ${BASELINE_FILES}/bfTvNDVIDataNodeFeatureFunctionOutput_Polygon.shp
- ${TEMP}/bfTvParserConditionDataNodeFeatureFunction_Polygon_NDVI.shp
- otbParserConditionDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvParserConditionDataNodeFeatureFunction_Polygon_NDVI.shp
- "ndvi(b3,b4) > 0.047"
- 0
- )
-
otb_add_test(NAME coTvParser COMMAND otbMathParserTestDriver
otbParserTest
)
diff --git a/Modules/Filtering/MathParser/test/otbMathParserTestDriver.cxx b/Modules/Filtering/MathParser/test/otbMathParserTestDriver.cxx
index 5ef579c49abbcd1d1a033f9c42ac09072d8aad97..4f12db6c962a985a8c7a0d92e2a449f28e8aef28 100644
--- a/Modules/Filtering/MathParser/test/otbMathParserTestDriver.cxx
+++ b/Modules/Filtering/MathParser/test/otbMathParserTestDriver.cxx
@@ -23,7 +23,6 @@
void RegisterTests()
{
REGISTER_TEST(otbMaskMuParserFilterTest);
- REGISTER_TEST(otbParserConditionDataNodeFeatureFunction);
REGISTER_TEST(otbParserTest);
REGISTER_TEST(otbImageListToSingleImageFilter);
REGISTER_TEST(otbBandMathImageFilter);
diff --git a/Modules/Filtering/MathParser/test/otbParserConditionDataNodeFeatureFunction.cxx b/Modules/Filtering/MathParser/test/otbParserConditionDataNodeFeatureFunction.cxx
deleted file mode 100644
index 4982b50ced444f777c2ae95ef66d2990c174319a..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MathParser/test/otbParserConditionDataNodeFeatureFunction.cxx
+++ /dev/null
@@ -1,121 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#include "otbParserConditionDataNodeFeatureFunction.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbVectorData.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataIntoImageProjectionFilter.h"
-#include "otbVectorDataFileWriter.h"
-#include "itkPreOrderTreeIterator.h"
-
-
-int otbParserConditionDataNodeFeatureFunction(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputImg = argv[2];
- const char * DEMDir = argv[3];
- const char * outputVD = argv[4];
- const char * expression = argv[5];
- int DisplayWarnings = atoi(argv[6]);
-
- typedef double CoordRepType;
- typedef double PrecisionType;
- typedef otb::VectorImage<PrecisionType> ImageType;
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::VectorData<CoordRepType, 2, PrecisionType> VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataIntoImageProjectionFilter<VectorDataType, ImageType> VectorDataReProjFilter;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType> TreeIteratorType;
-
- typedef otb::ParserConditionDataNodeFeatureFunction<ImageType, CoordRepType, PrecisionType>
- ParserConditionDataNodeFeaturefunctionType;
- typedef ParserConditionDataNodeFeaturefunctionType::OutputType ParserConditionFeatureOutputType;
-
- ImageReaderType::Pointer imgReader = ImageReaderType::New();
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReProjFilter::Pointer vdReProjFilter = VectorDataReProjFilter::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- ParserConditionDataNodeFeaturefunctionType::Pointer
- ParserConditionFeatureFunction = ParserConditionDataNodeFeaturefunctionType::New();
-
- if (!DisplayWarnings)
- {
- imgReader->SetGlobalWarningDisplay(0);
- }
-
- otb::DEMHandler::Instance()->OpenDEMDirectory(DEMDir);
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- imgReader->SetFileName(inputImg);
- imgReader->UpdateOutputInformation();
- imgReader->Update(); //Needed to set m_EndIndex, m_StartIndex in otbDataNodeImageFunction
-
- vdReProjFilter->SetInputImage(imgReader->GetOutput());
- vdReProjFilter->SetInputVectorData(vdReader->GetOutput());
- vdReProjFilter->SetUseOutputSpacingAndOriginFromImage(true);
- vdReProjFilter->Update();
-
- ParserConditionFeatureFunction->SetExpression(expression);
- ParserConditionFeatureFunction->SetInputImage(imgReader->GetOutput());
-
- // Output
- VectorDataType::Pointer outVD = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = outVD->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vdReProjFilter->GetOutput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsLineFeature() || itVector.Get()->IsPolygonFeature())
- {
- const DataNodeType::Pointer currentGeometry = itVector.Get();
- ParserConditionFeatureOutputType currentResult;
- currentResult = ParserConditionFeatureFunction->Evaluate(*(currentGeometry.GetPointer()));
- currentGeometry->SetFieldAsDouble("NDVI", (double) (currentResult[0]));
- outVD->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- vdWriter->SetInput(outVD);
- vdWriter->SetFileName(outputVD);
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/CMakeLists.txt b/Modules/Filtering/MorphologicalPyramid/CMakeLists.txt
deleted file mode 100644
index fdbf5b6d47d68fab8095ce62a22602de84cc7092..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBMorphologicalPyramid)
-otb_module_impl()
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.h
deleted file mode 100644
index b74ea6f27e557e57d9f33e79217a4170cab9d26b..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.h
+++ /dev/null
@@ -1,141 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidAnalysisFilter_h
-#define otbMorphologicalPyramidAnalysisFilter_h
-
-#include "otbImageToImageListFilter.h"
-
-namespace otb
-{
-/** \class MorphologicalPyramidAnalysisFilter
- * \brief Multiscale analysis filter using the morphological pyramid algorithm.
- *
- * Pyramidal decomposition is based on the following statement : once an
- * image has been smoothed with a linear filter, it does not contain
- * any more high-frequency details. Therefore, it can be down-sampled
- * without any loss of information, according to Shannon Theorem. By
- * iterating the same smoothing on the down-sampled image, a
- * multi-resolution decomposition of the scene is
- * computed. If the smoothing filter is a morphological filter, this
- * is no longer true, as the filter is not linear. However, by keeping
- * the details possibly lost in the down-sampling operation, such a
- * decomposition can be used.
- *
- * The MorphologicalPyramidAnalysisFilter provide such a
- * decomposition. It's computation process is an iterative analyse
- * involving smoothing by the morphological filter, computing the
- * details lost in the smoothing, down-sampling the current image, and
- * computing the details lost in the down-sampling.
- *
- * \ingroup MultiScale
- * \sa MorphologicalPyramidSynthesisFilter, OpeningClosingMorphologicalFilter,
- * ClosingOpeningMorphologicalFilter
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-class ITK_EXPORT MorphologicalPyramidAnalysisFilter
- : public ImageToImageListFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef MorphologicalPyramidAnalysisFilter Self;
- typedef ImageToImageListFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(MorphologicalPyramidAnalysisFilter, MorphologicalPyramidAnalysisFilter);
- /** Input image dimension constant macro */
- itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
- /** Template parameters typedefs */
- typedef TMorphoFilter MorphoFilterType;
- typedef typename MorphoFilterType::KernelType KernelType;
- /** Output related typedefs */
- typedef typename Superclass::OutputImageType OutputImageType;
- typedef typename Superclass::OutputImageListType OutputImageListType;
- typedef typename OutputImageListType::Pointer OutputImageListPointerType;
- typedef typename Superclass::OutputImagePointerType OutputImagePointerType;
- /** Input related typedefs */
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::InputImageRegionType InputImageRegionType;
- typedef typename InputImageType::Pointer InputImagePointerType;
- typedef typename InputImageType::ConstPointer InputImageConstPointerType;
- typedef typename InputImageType::SizeType SizeType;
- typedef typename InputImageType::ValueType ValueType;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::SpacingType SpacingType;
- /** Accessors */
- itkSetMacro(NumberOfLevels, int);
- itkSetMacro(DecimationRatio, double);
- itkGetConstReferenceMacro(NumberOfLevels, int);
- itkGetConstReferenceMacro(DecimationRatio, double);
- /**
- * Get The Analyse image at each level of the pyramid.
- * \return The analysed image at each level of the pyramid.
- */
- OutputImageListType* GetOutput(void) override;
- /**
- * Get The SupFilter details
- * \return The brighter details extracted from the filtering operation.
- */
- OutputImageListType * GetSupFilter(void);
- /**
- * Get The InfFilter details
- * \return The darker details extracted from the filtering operation.
- */
- OutputImageListType * GetInfFilter(void);
- /**
- * Get The SupDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- OutputImageListType * GetSupDeci(void);
- /**
- * Get The InfDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- OutputImageListType * GetInfDeci(void);
-
-protected:
- /** Constructor */
- MorphologicalPyramidAnalysisFilter();
- /** Destructor */
- ~MorphologicalPyramidAnalysisFilter() override;
- void GenerateOutputInformation() override {} // does nothing
- /** Main computation method */
- void GenerateData() override;
- /** Printself method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** Number of levels of the algorithm */
- int m_NumberOfLevels;
- /** Subsampling scale used */
- double m_DecimationRatio;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidAnalysisFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.hxx
deleted file mode 100644
index efa6eb0b51ea324ee4742cf7f7cc0c912dc060d3..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidAnalysisFilter.hxx
+++ /dev/null
@@ -1,294 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidAnalysisFilter_hxx
-#define otbMorphologicalPyramidAnalysisFilter_hxx
-
-#include "otbMorphologicalPyramidAnalysisFilter.h"
-
-#include "itkSubtractImageFilter.h"
-#include "itkMaximumImageFilter.h"
-#include "itkImageDuplicator.h"
-#include "otbMorphologicalPyramidResampler.h"
-#include "itkProgressAccumulator.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::MorphologicalPyramidAnalysisFilter()
-{
- this->SetNumberOfRequiredOutputs(2);
- m_DecimationRatio = 2.0;
- m_NumberOfLevels = 4;
- OutputImageListPointerType supFilter = OutputImageListType::New();
- this->SetNthOutput(0, supFilter.GetPointer());
- OutputImageListPointerType infFilter = OutputImageListType::New();
- this->SetNthOutput(1, infFilter.GetPointer());
- OutputImageListPointerType outputList = OutputImageListType::New();
- this->SetNthOutput(2, outputList.GetPointer());
- OutputImageListPointerType supDeci = OutputImageListType::New();
- this->SetNthOutput(3, supDeci.GetPointer());
- OutputImageListPointerType infDeci = OutputImageListType::New();
- this->SetNthOutput(4, infDeci.GetPointer());
-}
-/**
- * Destructor
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::~MorphologicalPyramidAnalysisFilter() {}
-/**
- * Get The Analyse image at each level of the pyramid.
- * \return The analysed image at each level of the pyramid.
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-typename MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::OutputImageListType*
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GetOutput(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(2));
-}
-/**
- * Get The SupFilter details
- * \return The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-typename MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::OutputImageListType*
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GetSupFilter(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(0));
-}
-/**
- * Get The InfFilter details
- * \return The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-typename MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::OutputImageListType*
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GetInfFilter(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(1));
-}
-/**
- * Get The SupDeci details
- * \return The brighter details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-typename MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::OutputImageListType*
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GetSupDeci(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(3));
-}
-/**
- * Get The InfDeci details
- * \return The brighter details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-typename MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::OutputImageListType*
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GetInfDeci(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(4));
-}
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-void
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::GenerateData(void)
-{
- // Input image pointer
- OutputImageListType * OutputImageList = this->GetOutput();
-
- // Output images pointers
- OutputImageListType * supFilter = this->GetSupFilter();
- OutputImageListType * infFilter = this->GetInfFilter();
- OutputImageListType * supDeci = this->GetSupDeci();
- OutputImageListType * infDeci = this->GetInfDeci();
-
- // typedefs of the filters
- typedef itk::SubtractImageFilter<InputImageType, InputImageType, OutputImageType> SubtractFilterType;
- typedef itk::MaximumImageFilter<InputImageType, InputImageType, InputImageType> MaxFilterType;
- typedef itk::ImageDuplicator<InputImageType> DuplicatorType;
- typedef otb::MorphologicalPyramid::Resampler<InputImageType, OutputImageType> ResamplerType;
-
- // Input Image duplication to the currentImage Pointer
- typename DuplicatorType::Pointer duplicator = DuplicatorType::New();
- duplicator->SetInputImage(this->GetInput());
- duplicator->Update();
- typename InputImageType::Pointer currentImage = duplicator->GetOutput();
- typename InputImageType::Pointer upsampled;
-
- // Structuring element size computation
- const int structElementDimension = static_cast<int>(std::ceil(this->GetDecimationRatio() / 2.));
-
- // Structuring element creation
- KernelType structuringElement;
- structuringElement.SetRadius(structElementDimension);
- structuringElement.CreateStructuringElement();
-
- // Filters declarations
- typename MorphoFilterType::Pointer morphoFilter;
- typename MaxFilterType::Pointer max;
- typename SubtractFilterType::Pointer subtract1, subtract2, subtract3, subtract4;
- typename ResamplerType::Pointer resampler1, resampler2;
-
- // Size declaration
- typename InputImageType::SizeType size;
-
- // local variables declarations and initializations
- int i = 0;
- int sizeTmp;
- //--------------------------------------------------------//
- // Main loop //
- //--------------------------------------------------------//
- // While the number of iterations is not reached
- otbMsgDevMacro(<< "Entering main loop");
- while (i < this->GetNumberOfLevels())
- {
-
- // morphological filtering
- morphoFilter = MorphoFilterType::New();
- morphoFilter->SetKernel(structuringElement);
- morphoFilter->SetInput(currentImage);
- morphoFilter->Update();
-
- // Maximum between current and filtered image
- max = MaxFilterType::New();
- max->SetInput1(morphoFilter->GetOutput());
- max->SetInput2(currentImage);
- max->Update();
-
- // SupFilter detail image computation
- subtract1 = SubtractFilterType::New();
- subtract1->SetInput1(max->GetOutput());
- subtract1->SetInput2(morphoFilter->GetOutput());
- subtract1->Update();
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: subtract1 OK " <<
- subtract1->GetOutput()->GetLargestPossibleRegion().GetSize());
- supFilter->PushBack(subtract1->GetOutput());
- otbMsgDevMacro("MorphologicalPyramidAnalysisFilter: step " << i << " - Image appended to SupFilter");
-
- // InfFilter detail image computation
- subtract2 = SubtractFilterType::New();
- subtract2->SetInput1(max->GetOutput());
- subtract2->SetInput2(currentImage);
- subtract2->Update();
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: subtract2 OK " <<
- subtract2->GetOutput()->GetLargestPossibleRegion().GetSize());
- infFilter->PushBack(subtract2->GetOutput());
- otbMsgDevMacro("MorphologicalPyramidAnalysisFilter: step " << i << " - Image appended to InfFilter");
-
- // New Size
- size = morphoFilter->GetOutput()->GetLargestPossibleRegion().GetSize();
- for (unsigned int j = 0; j < InputImageType::ImageDimension; ++j)
- {
- sizeTmp = size[j];
- // As we knwow that our values will always be positive ones, we can simulate round by ceil(value+0.5)
- size[j] = static_cast<unsigned int>(std::ceil((static_cast<double>(sizeTmp) / this->GetDecimationRatio()) + 0.5));
- }
- otbMsgDevMacro(<< "New size: " << size);
-
- // Image subsampling
- // Current image becomes the newly subsampled image
- resampler1 = ResamplerType::New();
- resampler1->SetInput(morphoFilter->GetOutput());
- resampler1->SetSize(size);
- resampler1->Update();
- currentImage = resampler1->GetOutput();
-
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: DownSampling OK " << currentImage->GetLargestPossibleRegion().GetSize());
- // New current image is appended to the output list
- OutputImageList->PushBack(currentImage);
-
- // Image upsampling
- resampler2 = ResamplerType::New();
- resampler2->SetInput(resampler1->GetOutput());
- resampler2->SetSize(morphoFilter->GetOutput()->GetLargestPossibleRegion().GetSize());
- resampler2->Update();
-
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: UpSampling OK " <<
- resampler2->GetOutput()->GetLargestPossibleRegion().GetSize());
- // Computation of the details lost in the subsampling operation
- max = MaxFilterType::New();
- max->SetInput1(morphoFilter->GetOutput());
- max->SetInput2(resampler2->GetOutput());
- max->Update();
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: Max OK " << max->GetOutput()->GetLargestPossibleRegion().GetSize());
-
- // InfDeci detail image computation
- subtract4 = SubtractFilterType::New();
- subtract4->SetInput1(max->GetOutput());
- subtract4->SetInput2(morphoFilter->GetOutput());
- subtract4->Update();
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: subtract4 OK " <<
- subtract4->GetOutput()->GetLargestPossibleRegion().GetSize());
- infDeci->PushBack(subtract4->GetOutput());
- otbMsgDevMacro("MorphologicalPyramidAnalysisFilter: step " << i << " - Image appended to InfDeci");
-
- // SupDeci detail image computation
- subtract3 = SubtractFilterType::New();
- subtract3->SetInput1(max->GetOutput());
- subtract3->SetInput2(resampler2->GetOutput());
- subtract3->Update();
- otbMsgDevMacro(
- << "MorphologicalPyramidAnalysisFilter: subtract3 OK " <<
- subtract3->GetOutput()->GetLargestPossibleRegion().GetSize());
- supDeci->PushBack(subtract3->GetOutput());
- otbMsgDevMacro("MorphologicalPyramidAnalysisFilter: step " << i << " - Image appended to SupDeci");
-
- // Iteration ounter incrementation
- ++i;
- }
- otbMsgDevMacro(<< "Exiting main loop");
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage, class TMorphoFilter>
-void
-MorphologicalPyramidAnalysisFilter<TInputImage, TOutputImage, TMorphoFilter>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "DecimationRatio: " << m_DecimationRatio << std::endl;
- os << indent << "NumberOfLevels: " << m_NumberOfLevels << std::endl;
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.h
deleted file mode 100644
index 65768b624caba0047b54cb4ced32745a59326cca..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.h
+++ /dev/null
@@ -1,173 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidMRToMSConverter_h
-#define otbMorphologicalPyramidMRToMSConverter_h
-
-#include "otbImageListToImageListFilter.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * \class MRToMSConverter
- * \brief This class convert a multi resolution decomposition from the morphological pyramid to a multi-scale one.
- *
- * This class convert a multi resolution decomposition from the morphological pyramid to a multi-scale one.
- *
- * The operation consists in iterativly upsampling and adding decimation details to a given detail image.
- *
- * \sa MorphologicalPyramidAnalyseFilter
- * \sa MorphologicalPyramidSynthesisFilter
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage>
-class ITK_EXPORT MRToMSConverter
- : public ImageListToImageListFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef MRToMSConverter Self;
- typedef ImageListToImageListFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(MRToMSConverter, ImageListToImageListFilter);
- /** Input parameters typedefs */
- typedef TInputImage InputImageType;
- typedef typename Superclass::InputImagePointer InputImagePointer;
- typedef typename Superclass::InputImageListType InputImageListType;
- typedef typename Superclass::InputImageListPointerType InputImageListPointerType;
- typedef typename InputImageListType::Iterator InputImageListIteratorType;
- /** Output parameters typedefs */
- typedef TOutputImage OutputImageType;
- typedef typename Superclass::OutputImagePointer OutputImagePointerType;
- typedef typename Superclass::OutputImageListType OutputImageListType;
- typedef typename Superclass::OutputImageListPointerType OutputImageListPointerType;
-
- /**
- * Set The input list.
- * \param imageList The analysed image at each level of the pyramid.
- */
- using Superclass::SetInput;
- void SetInput(const InputImageListType * imageList) override;
- /**
- * Set The SupFilter details
- * \param imageList The brighter details extracted from the filtering operation.
- */
- void SetSupFilter(InputImageListType * imageList);
- /**
- * Set The InfFilter details
- * \param imageList The darker details extracted from the filtering operation.
- */
- void SetInfFilter(InputImageListType * imageList);
- /**
- * Set The SupDeci details
- * \param imageList The brighter details extracted from the filtering operation.
- */
- void SetSupDeci(InputImageListType * imageList);
- /**
- * Set The InfDeci details
- * \param imageList The darker details extracted from the filtering operation.
- */
- void SetInfDeci(InputImageListType * imageList);
- /**
- * Get the input list.
- * \return The list of the analysed image at each pyramid level.
- */
- InputImageListType* GetInput(void) override;
- /**
- * Get The SupFilter details
- * \return The brighter details extracted from the filtering operation.
- */
- InputImageListType* GetSupFilter(void);
- /**
- * Get The InfFilter details
- * \return The darker details extracted from the filtering operation.
- */
- InputImageListType* GetInfFilter(void);
- /**
- * Get The SupDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- InputImageListType* GetSupDeci(void);
- /**
- * Get The InfDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- InputImageListType* GetInfDeci(void);
- /**
- * Get The inputList at full resolution.
- * \return The analysed image at each pyramid level
- * resampled at full resolution.
- */
- OutputImageListType* GetOutput(void) override;
- /**
- * Get The SupFilter details at full resolution.
- * \return The brighter details extracted from the filtering operation
- * resampled at full resolution.
- */
- OutputImageListType * GetSupFilterFullResolution(void);
- /**
- * Get The InfFilter details at full resolution.
- * \return The darker details extracted from the filtering operation
- * resampled at full resolution.
- */
- OutputImageListType * GetInfFilterFullResolution(void);
- /**
- * Get The SupDeci details at full resolution.
- * \return The brighter details extracted from the resampling operation
- * resampled at full resolution.
- */
- OutputImageListType * GetSupDeciFullResolution(void);
- /**
- * Get The InfDeci details at full resolution.
- * \return The darker details extracted from the resampling operation
- * resampled at full resolution.
- */
- OutputImageListType * GetInfDeciFullResolution(void);
-
-protected:
- /** Constructor */
- MRToMSConverter();
- /** Destructor */
- ~MRToMSConverter() override {}
-
- /** Main computation method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- MRToMSConverter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidMRToMSConverter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.hxx
deleted file mode 100644
index 51f9ff57e667d987d420a3a02d2c8a120da27e46..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidMRToMSConverter.hxx
+++ /dev/null
@@ -1,359 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidMRToMSConverter_hxx
-#define otbMorphologicalPyramidMRToMSConverter_hxx
-
-#include "otbMorphologicalPyramidMRToMSConverter.h"
-#include "otbMorphologicalPyramidResampler.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage>
-MRToMSConverter<TInputImage, TOutputImage>
-::MRToMSConverter()
-{
- this->SetNumberOfRequiredInputs(2);
- this->SetNumberOfRequiredOutputs(2);
- OutputImageListPointerType supFilter = OutputImageListType::New();
- this->SetNthOutput(0, supFilter.GetPointer());
- OutputImageListPointerType infFilter = OutputImageListType::New();
- this->SetNthOutput(1, infFilter.GetPointer());
- OutputImageListPointerType outputList = OutputImageListType::New();
- this->SetNthOutput(2, outputList.GetPointer());
- OutputImageListPointerType supDeci = OutputImageListType::New();
- this->SetNthOutput(3, supDeci.GetPointer());
- OutputImageListPointerType infDeci = OutputImageListType::New();
- this->SetNthOutput(4, infDeci.GetPointer());
-}
-/**
- * Get The inputList at full resolution.
- * \return The analysed image at each pyramid level
- * resampled at full resolution.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::OutputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetOutput(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(2));
-}
-/**
- * Get The SupFilter details at full resolution.
- * \return The brighter details extracted from the filtering operation.
- * resampled at full resolution.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::OutputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetSupFilterFullResolution(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(0));
-}
-/**
- * Get The InfFilter details at full resolution.
- * \return The darker details extracted from the filtering operation.
- * resampled at full resolution.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::OutputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetInfFilterFullResolution(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(1));
-}
-/**
- * Get The SupDeci details at full resolution.
- * \return The brighter details extracted from the resampling operation.
- * resampled at full resolution.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::OutputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetSupDeciFullResolution(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(3));
-}
-/**
- * Get The InfDeci details at full resolution.
- * \return The brighter details extracted from the resampling operation.
- * resampled at full resolution.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::OutputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetInfDeciFullResolution(void)
-{
- return dynamic_cast<OutputImageListType*>(this->itk::ProcessObject::GetOutput(4));
-}
-/**
- * Set The input list.
- * \param imageList The analysed image at each level of the pyramid.
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::SetInput(const InputImageListType * imageList)
-{
- this->SetNthInput(2, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The SupFilter details
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::SetSupFilter(InputImageListType * imageList)
-{
- this->SetNthInput(0, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The InfFilter details
- * \param imageList The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::SetInfFilter(InputImageListType * imageList)
-{
- this->SetNthInput(1, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The SupDeci details
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::SetSupDeci(InputImageListType * imageList)
-{
- this->SetNthInput(3, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The InfDeci details
- * \param imageList The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::SetInfDeci(InputImageListType * imageList)
-{
- this->SetNthInput(4, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Get the input list.
- * \return The list of the analysed image at each pyramid level.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::InputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetInput(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(2));
-}
-/**
- * Get The SupFilter details.
- * \return The brighter details extracted from the filtering operation
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::InputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetSupFilter(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(0));
-}
-/**
- * Get The InfFilter details.
- * \return The darker details extracted from the filtering operation
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::InputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetInfFilter(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(1));
-}
-/**
- * Get The SupDeci details.
- * \return The brighter details extracted from the resampling operation
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::InputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetSupDeci(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(3));
-}
-/**
- * Get The InfDeci details.
- * \return The darker details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MRToMSConverter<TInputImage, TOutputImage>
-::InputImageListType*
-MRToMSConverter<TInputImage, TOutputImage>
-::GetInfDeci(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(4));
-}
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::GenerateData()
-{
- // Input images lists pointers
- InputImageListPointerType supFilter = this->GetSupFilter();
- InputImageListPointerType infFilter = this->GetInfFilter();
- InputImageListPointerType supDeci = this->GetSupDeci();
- InputImageListPointerType infDeci = this->GetInfDeci();
- InputImageListPointerType inputList = this->GetInput();
-
- // Output images lists pointers
- OutputImageListPointerType supFilterFullResolution = this->GetSupFilterFullResolution();
- OutputImageListPointerType infFilterFullResolution = this->GetInfFilterFullResolution();
- OutputImageListPointerType supDeciFullResolution = this->GetSupDeciFullResolution();
- OutputImageListPointerType infDeciFullResolution = this->GetInfDeciFullResolution();
- OutputImageListPointerType outputList = this->GetOutput();
-
- // typedef of the resampling filter
- typedef otb::MorphologicalPyramid::Resampler<InputImageType, OutputImageType> ResamplerType;
-
- // Definition of the resampler filters
- typename ResamplerType::Pointer resampler;
-
- // Full resolution size
- typename InputImageType::SizeType frsize = supFilter->Front()->GetLargestPossibleRegion().GetSize();
- otbMsgDevMacro(<< "MRToMSConverter: Full resolution size: " << frsize);
-
- // SupFilter resampling
- otbMsgDevMacro(<< "MRToMSConverter: SupFilter resampling.");
- InputImageListIteratorType it = supFilter->Begin();
- // The first image does not need any resampling
- supFilterFullResolution->PushBack(it.Get());
- ++it;
- for (; it != supFilter->End(); ++it)
- {
- resampler = ResamplerType::New();
- resampler->SetSize(frsize);
- resampler->SetInput(it.Get());
- resampler->Update();
- supFilterFullResolution->PushBack(resampler->GetOutput());
- }
- otbMsgDevMacro(<< "MRToMSConverter: InfFilter resampling.");
- // InfFilter resampling
- it = infFilter->Begin();
- // The first image does not need any resampling
- infFilterFullResolution->PushBack(it.Get());
- ++it;
- for (; it != infFilter->End(); ++it)
- {
- resampler = ResamplerType::New();
- resampler->SetSize(frsize);
- resampler->SetInput(it.Get());
- resampler->Update();
- infFilterFullResolution->PushBack(resampler->GetOutput());
- }
-
- if (inputList)
- {
- otbMsgDevMacro(<< "MRToMSConverter: Optional inputList resampling.");
- // Analyse image resampling
- it = inputList->Begin();
- // The first image does not need any resampling
- outputList->PushBack(it.Get());
- ++it;
- for (; it != inputList->End(); ++it)
- {
- resampler = ResamplerType::New();
- resampler->SetSize(frsize);
- resampler->SetInput(it.Get());
- resampler->Update();
- outputList->PushBack(resampler->GetOutput());
- }
- }
-
- if (supDeci)
- {
- otbMsgDevMacro(<< "MRToMSConverter: Optional supDeci resampling.");
- // SupDeci resampling
- it = supDeci->Begin();
- // The first image does not need any resampling
- supDeciFullResolution->PushBack(it.Get());
- ++it;
- for (; it != supDeci->End(); ++it)
- {
- resampler = ResamplerType::New();
- resampler->SetSize(frsize);
- resampler->SetInput(it.Get());
- resampler->Update();
- supDeciFullResolution->PushBack(resampler->GetOutput());
- }
- }
-
- if (infDeci)
- {
- otbMsgDevMacro(<< "MRToMSConverter: Optional infDeci resampling.");
- // InfDeci resampling
- it = infDeci->Begin();
- // The first image does not need any resampling
- infDeciFullResolution->PushBack(it.Get());
- ++it;
- for (; it != infDeci->End(); ++it)
- {
- resampler = ResamplerType::New();
- resampler->SetSize(frsize);
- resampler->SetInput(it.Get());
- resampler->Update();
- infDeciFullResolution->PushBack(resampler->GetOutput());
- }
- }
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage>
-void
-MRToMSConverter<TInputImage, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.h
deleted file mode 100644
index 7ce6013ba36c5a2a8b28627f6135a13ea942abfa..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.h
+++ /dev/null
@@ -1,104 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidResampler_h
-#define otbMorphologicalPyramidResampler_h
-
-#include "itkImageToImageFilter.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * \class Resampler
- * \brief This class performs the resampling of the given image to the given size.
- *
- * This class performs the resampling of the given image to the given size.It is used
- * in the MorphologicalPyramidAnalyseFilter and MorphologicalPyramidSynthesisFilter.
- *
- * The resampling is done by the itk::ResampleImageFilter, templated with the interpolator
- * itk::LinearInterpolateImageFunction and the transform itk::ScaleTransform.
- *
- * \sa MorphologicalPyramidAnalyseFilter
- * \sa MorphologicalPyramidSynthesisFilter
- * \sa ResampleImageFilter
- * \sa LinearInterpolateImageFunction
- * \sa ScaleTransform
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage>
-class ITK_EXPORT Resampler
- : public itk::ImageToImageFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef Resampler Self;
- typedef itk::ImageToImageFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(Resampler, ImageToImageFilter);
- /** Template parameters typedefs */
- typedef TInputImage InputImageType;
- typedef TOutputImage OutputImageType;
- typedef typename OutputImageType::Pointer OutputImagePointer;
- typedef typename InputImageType::Pointer InputImagePointer;
- typedef typename OutputImageType::RegionType OutputImageRegionType;
- typedef typename TInputImage::PixelType PixelType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename OutputImageType::SizeType SizeType;
- typedef typename OutputImageType::SpacingType SpacingType;
- /** Size parameter accessor */
- itkSetMacro(Size, SizeType);
- itkGetMacro(Size, SizeType);
-
-protected:
- /** Constructor */
- Resampler();
- /** Destructor */
- ~Resampler() override {}
- /** Generate output information */
- void GenerateOutputInformation() override;
- /** Configure input requested region to be the largest possible region */
- void GenerateInputRequestedRegion() override;
- /** Configure output requested region to be the largest possible region */
- void EnlargeOutputRequestedRegion(itk::DataObject * itkNotUsed(output)) override;
- /** Main computation method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-private:
- Resampler(const Self &) = delete;
- void operator =(const Self&) = delete;
- /// Output image size
- SizeType m_Size;
-};
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidResampler.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.hxx
deleted file mode 100644
index 97cbf4a3c122c794ba8e2b735c49ff8ca3f64d79..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidResampler.hxx
+++ /dev/null
@@ -1,183 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidResampler_hxx
-#define otbMorphologicalPyramidResampler_hxx
-#include "otbMorphologicalPyramidResampler.h"
-#include "itkResampleImageFilter.h"
-#include "itkScalableAffineTransform.h"
-#include "itkNearestNeighborInterpolateImageFunction.h"
-#include "itkProgressAccumulator.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage>
-Resampler<TInputImage, TOutputImage>
-::Resampler()
-{
- for (unsigned int i = 0; i < InputImageType::ImageDimension; ++i)
- {
- m_Size[i] = 0;
- }
-}
-/**
- * Configure input requested region to be the largest possible region.
- */
-template <class TInputImage, class TOutputImage>
-void
-Resampler<TInputImage, TOutputImage>
-::GenerateInputRequestedRegion()
-{
- // Superclass method call
- Superclass::GenerateInputRequestedRegion();
- // Input and output image pointers retrieval
- InputImagePointer inputPtr = const_cast<InputImageType *> (this->GetInput());
- OutputImagePointer outputPtr = this->GetOutput();
- // If the pointers are not correct
- if (!inputPtr || !outputPtr)
- {
- // exit
- return;
- }
- // else
- // Configure input requested region to be the largest possible region
- inputPtr->SetRequestedRegion(inputPtr->GetLargestPossibleRegion());
-}
-/**
- * Configure output requested region to be the largest possible region
- */
-template <class TInputImage, class TOutputImage>
-void
-Resampler<TInputImage, TOutputImage>
-::EnlargeOutputRequestedRegion(itk::DataObject *itkNotUsed(output))
-{
- this->GetOutput()->SetRequestedRegion(this->GetOutput()->GetLargestPossibleRegion());
-}
-/**
- * Generate output information
- */
-template <class TInputImage, class TOutputImage>
-void
-Resampler<TInputImage, TOutputImage>
-::GenerateOutputInformation()
-{
- // Superclass method call
- Superclass::GenerateOutputInformation();
- // Input and output image pointers retrieval
- InputImageConstPointer inputPtr = this->GetInput();
- OutputImagePointer outputPtr = this->GetOutput();
- // If the pointers are not correct
- if (!inputPtr || !outputPtr)
- {
- // exit
- return;
- }
- unsigned int i;
- // Computing output spacing, size and index from input data
- const typename InputImageType::SpacingType& inputSpacing = inputPtr->GetSignedSpacing();
- const typename InputImageType::IndexType& inputStartIndex = inputPtr->GetLargestPossibleRegion().GetIndex();
- typename OutputImageType::IndexType outputStartIndex;
- typename OutputImageType::SpacingType spacing;
- for (i = 0; i < OutputImageType::ImageDimension; ++i)
- {
- outputStartIndex[i] = inputStartIndex[i];
- }
-
- outputPtr->SetSignedSpacing(inputSpacing);
- typename OutputImageType::RegionType outputLargestPossibleRegion;
- outputLargestPossibleRegion.SetSize(this->GetSize());
- outputLargestPossibleRegion.SetIndex(outputStartIndex);
- outputPtr->SetLargestPossibleRegion(outputLargestPossibleRegion);
-}
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage>
-void
-Resampler<TInputImage, TOutputImage>
-::GenerateData()
-{
- typename OutputImageType::Pointer result;
-
- // Filters typedefs
- typedef itk::ResampleImageFilter<InputImageType, OutputImageType> ResampleFilterType;
- typedef itk::ScalableAffineTransform<double, InputImageType::ImageDimension> TransformType;
- typedef itk::LinearInterpolateImageFunction<InputImageType, double> InterpolatorType;
-
- // Resampling filter creation
- typename ResampleFilterType::Pointer resampler = ResampleFilterType::New();
- typename InterpolatorType::Pointer interpolator = InterpolatorType::New();
- typename TransformType::Pointer transform = TransformType::New();
-
- // Scale parameters computation
- typename TransformType::InputVectorType scales;
- typename InputImageType::SizeType inputSize = this->GetInput()->GetLargestPossibleRegion().GetSize();
- typename InputImageType::SpacingType inputSpacing = this->GetInput()->GetSignedSpacing();
- scales[0] = static_cast<double>(inputSize[0]) / static_cast<double>(m_Size[0]);
- scales[1] = static_cast<double>(inputSize[1]) / static_cast<double>(m_Size[1]);
- transform->SetScale(scales);
- transform->SetCenter(this->GetInput()->GetOrigin());
- typename TransformType::OutputVectorType translation;
- translation[0] = 0.5 * inputSpacing[0] * (scales[0] - 1.0);
- translation[1] = 0.5 * inputSpacing[1] * (scales[1] - 1.0);
- transform->SetTranslation(translation);
-
-
- // Resampling filter set up
- resampler->SetTransform(transform);
- resampler->SetInterpolator(interpolator);
- resampler->SetOutputOrigin(this->GetInput()->GetOrigin());
- resampler->SetSize(this->GetSize());
- resampler->SetOutputSpacing( this->GetInput()->GetSpacing() );
- resampler->SetOutputDirection( this->GetInput()->GetDirection() );
- resampler->ReleaseDataFlagOn();
-
- // Progress accumulator
- itk::ProgressAccumulator::Pointer progress = itk::ProgressAccumulator::New();
- progress->SetMiniPipelineFilter(this);
- progress->RegisterInternalFilter(resampler, .5f);
-
- // Input image connexion
- resampler->SetInput(this->GetInput());
- resampler->Update();
- result = resampler->GetOutput();
-
- /** Output filter connexion */
- this->GraftOutput(result);
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage>
-void
-Resampler<TInputImage, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Size: " << m_Size << std::endl;
-}
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.h
deleted file mode 100644
index ea999b2a6d399ac17c860be768c528f5166feff2..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.h
+++ /dev/null
@@ -1,165 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSegmentationFilter_h
-#define otbMorphologicalPyramidSegmentationFilter_h
-
-#include "otbImageListToImageListFilter.h"
-namespace otb
-{
-/** \class MorphologicalPyramidSegmentationFilter
- * \brief This filter performs a segmentation of the details supFilter and infFilter extracted
- * with the morphological pyramid.
- *
- * The first step is to convert the multi-resolution analysis from the pyramid to a multi-scale one using the
- * MRToMSConverter filter.
- *
- * The segmentation algorithm used is based on seeds extraction using the ImageToPointSetFilter, followed by
- * a connected threshold segmentation using the ConnectedThresholdImageFilter. A final relabelling step is done
- * with the LabelImageFilter and RelabelImageFilter to remove object whose sizes are to small regarding the
- * MinimumObjectSize parameter. The threshold for seeds extraction and segmentation are computed using quantiles.
- *
- * A pre processing step is applied by multiplying the full resolution brighter details (resp. darker details)
- * with the original image (resp. the inverted original image). This performs an enhancement of the regions contour
- * precision.
- *
- * The details from the pyramid are set via the SetBrighterDetails() and SetDarkerDetails() methods. The brighter and
- * darker details depends on the filter used in the pyramid analysis. If the OpeningClosing filter is used, then the
- * brighter details are those from the supFilter image list, whereas if the ClosingOpening filter is used, the brighter
- * details are those from the infFilter list.
- *
- * The output of the segmentation filter is a single segmentation images list, containing first the brighter details
- * segmentation from higher scale to lower, and then the darker details in the same order. The attention of the used
- * is drawn to the fact that since the label filter used internally will deal with a large number of labels, so the
- * OutputPixelType is required to be sufficiently precise. Unsigned short or Unsigned long would be a good choice,
- * unless the user has a very good reason to think that a less precise type will be sufficient.
- *
- * \ingroup MultiScale
- * \sa MorphologicalPyramidSynthesisFilter, OpeningClosingMorphologicalFilter,
- * ClosingOpeningMorphologicalFilter, Segmenter, MRToMSConverter, Resampler
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage>
-class ITK_EXPORT MorphologicalPyramidSegmentationFilter
- : public ImageListToImageListFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef MorphologicalPyramidSegmentationFilter Self;
- typedef ImageListToImageListFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(MorphologicalPyramidSegmentationFilter, ImageListToImageListFilter);
- /** Input image dimension constant macro */
- itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
- /** Output related typedefs */
- typedef typename Superclass::OutputImageType OutputImageType;
- typedef typename OutputImageType::PixelType OutputPixelType;
- typedef typename Superclass::OutputImageListType OutputImageListType;
- typedef typename OutputImageListType::Pointer OutputImageListPointerType;
- typedef typename Superclass::OutputImagePointerType OutputImagePointerType;
- typedef typename OutputImageListType::Iterator OutputImageListIteratorType;
- /** Input related typedefs */
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef typename InputImageType::Pointer InputImagePointerType;
- typedef typename Superclass::InputImageListType InputImageListType;
- typedef typename InputImageListType::Pointer InputImageListPointerType;
- /** Vector of number of objects */
- typedef std::vector<OutputPixelType> NumberOfObjectsVectorType;
- /** Min object size parameter accessor */
- itkSetMacro(MinimumObjectSize, unsigned long);
- itkGetMacro(MinimumObjectSize, unsigned long);
- /** Quantile for seeds extraction */
- itkSetMacro(SeedsQuantile, double);
- itkGetMacro(SeedsQuantile, double);
- /** Quantile for connected thresholding */
- itkSetMacro(ConnectedThresholdQuantile, double);
- itkGetMacro(ConnectedThresholdQuantile, double);
- /**
- * Get a vector containing the number of segmented objects for each image.
- * \return The vector.
- */
- NumberOfObjectsVectorType GetNumberOfObjectsVector(void);
- /**
- * Set the reference image.
- * \param image The reference image which was decomposed by the pyramid.
- */
- void SetReferenceImage(InputImageType * image);
- /**
- * Set the brighter details from the pyramid. The brighter details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \param imageList The brighter details extracted from the filtering operation.
- */
- void SetBrighterDetails(InputImageListType * imageList);
- /**
- * Set the darker details from the pyramid. The darker details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \param imageList The darker details extracted from the filtering operation.
- */
- void SetDarkerDetails(InputImageListType * imageList);
- /**
- * Get the reference image
- * \return The reference image.
- */
- InputImageType* GetReferenceImage(void);
- /**
- * Get the brighter details from the pyramid. The brighter details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \return The brighter details extracted from the resampling operation.
- */
- InputImageListType* GetBrighterDetails(void);
- /**
- * Get the darker details from the pyramid. The darker details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \return The darker details extracted from the resampling operation.
- */
- InputImageListType *GetDarkerDetails(void);
-
-protected:
- /** Constructor */
- MorphologicalPyramidSegmentationFilter();
- /** Destructor */
- ~MorphologicalPyramidSegmentationFilter() override;
- void GenerateOutputInformation() override {} // does nothing
- /** Main computation method */
- void GenerateData() override;
- /** Printself method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-private:
- unsigned long m_MinimumObjectSize;
- /** Quantile for seeds determination */
- double m_SeedsQuantile;
- /** Quantile to set the connectedThresholdFilter threshold */
- double m_ConnectedThresholdQuantile;
- /** Number of segmented objects per images */
- NumberOfObjectsVectorType m_NumberOfObjectsVector;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidSegmentationFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.hxx
deleted file mode 100644
index eab84021facc5864d3204878b836da3088359f84..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmentationFilter.hxx
+++ /dev/null
@@ -1,212 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSegmentationFilter_hxx
-#define otbMorphologicalPyramidSegmentationFilter_hxx
-
-#include "otbMorphologicalPyramidSegmentationFilter.h"
-
-#include "otbMorphologicalPyramidMRToMSConverter.h"
-#include "otbMorphologicalPyramidSegmenter.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage>
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::MorphologicalPyramidSegmentationFilter()
-{
- this->SetNumberOfRequiredInputs(3);
- m_MinimumObjectSize = 10;
- m_SeedsQuantile = 0.9;
- m_ConnectedThresholdQuantile = 0.9;
-}
-/**
- * Destructor
- */
-template <class TInputImage, class TOutputImage>
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::~MorphologicalPyramidSegmentationFilter() {}
-
-/**
- * Set the reference image.
- * \param image The reference image which was decomposed by the pyramid.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::SetReferenceImage(InputImageType * image)
-{
- this->SetNthInput(0, const_cast<InputImageType *>(image));
-}
-/**
- * Set the brighter details from the pyramid. The brighter details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::SetBrighterDetails(InputImageListType * imageList)
-{
- this->SetNthInput(1, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set the darker details from the pyramid. The darker details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \param imageList The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::SetDarkerDetails(InputImageListType * imageList)
-{
- this->SetNthInput(2, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Get the reference image
- * \return The reference image.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::InputImageType*
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::GetReferenceImage(void)
-{
- return dynamic_cast<InputImageType *>(this->itk::ProcessObject::GetInput(0));
-}
-/**
- * Get the brighter details from the pyramid. The brighter details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::GetBrighterDetails(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(1));
-}
-/**
- * Get the darker details from the pyramid. The darker details are the supFilter or
- * infFilter details from the pyramid, depending on the morphological filter used.
- * \return The darker details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::GetDarkerDetails(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(2));
-}
-
-/**
- * Get a vector containing the number of segmented objects for each image.
- * \return The vector.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::NumberOfObjectsVectorType
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::GetNumberOfObjectsVector(void)
-{
- return m_NumberOfObjectsVector;
-}
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::GenerateData(void)
-{
- // Reference image pointer
- InputImagePointerType referenceImage = this->GetReferenceImage();
- otbMsgDevMacro("SegmentationFilter: reference image size: " << referenceImage->GetLargestPossibleRegion().GetSize());
-
- // Output images list pointer
- OutputImageListPointerType outputList = this->GetOutput();
-
- // Multi resolution to multi scale filter typedef
- typedef otb::MorphologicalPyramid::MRToMSConverter<InputImageType, InputImageType> MRToMSConverterType;
-
- // Segmentation filter typedef
- typedef otb::MorphologicalPyramid::Segmenter<InputImageType, OutputImageType> SegmenterType;
-
- // MR To MS conversion
- typename MRToMSConverterType::Pointer mrtoms = MRToMSConverterType::New();
- mrtoms->SetSupFilter(this->GetBrighterDetails());
- mrtoms->SetInfFilter(this->GetDarkerDetails());
- mrtoms->Update();
-
- // Full resolution Input images lists pointers
- InputImageListPointerType brighter = mrtoms->GetSupFilterFullResolution();
- InputImageListPointerType darker = mrtoms->GetInfFilterFullResolution();
-
- // Segmentation filter definition
- typename InputImageListType::Iterator it;
- // Segment the supFilter details
- for (it = brighter->Begin(); it != brighter->End(); ++it)
- {
- typename SegmenterType::Pointer segmenter = SegmenterType::New();
- segmenter->SetMinimumObjectSize(m_MinimumObjectSize);
- segmenter->SetSeedsQuantile(m_SeedsQuantile);
- segmenter->SetConnectedThresholdQuantile(m_ConnectedThresholdQuantile);
- segmenter->SetOriginalImage(referenceImage);
- segmenter->SetDetailsImage(it.Get());
- segmenter->Update();
- m_NumberOfObjectsVector.push_back(segmenter->GetNumberOfObjects());
- outputList->PushBack(segmenter->GetOutput());
- }
-
- // Segment the infFilter details
- for (it = darker->Begin(); it != darker->End(); ++it)
- {
- typename SegmenterType::Pointer segmenter = SegmenterType::New();
- segmenter->SetMinimumObjectSize(m_MinimumObjectSize);
- segmenter->SetSeedsQuantile(m_SeedsQuantile);
- segmenter->SetConnectedThresholdQuantile(m_ConnectedThresholdQuantile);
- segmenter->SetOriginalImage(referenceImage);
- segmenter->SetSegmentDarkDetailsBool(true);
-
- segmenter->SetDetailsImage(it.Get());
- segmenter->Update();
- m_NumberOfObjectsVector.push_back(segmenter->GetNumberOfObjects());
- outputList->PushBack(segmenter->GetOutput());
- }
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSegmentationFilter<TInputImage, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.h
deleted file mode 100644
index 873ee46da44eab0b49cf18fef11e36406b55c3e2..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.h
+++ /dev/null
@@ -1,159 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSegmenter_h
-#define otbMorphologicalPyramidSegmenter_h
-
-#include "itkImageToImageFilter.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * \class Segmenter
- * \brief This class performs the segmentation of a detail image extracted from a
- * morphological pyramid analysis.
- *
- * This class performs the segmentation of a detail image extracted from a
- * morphological pyramid analysis.
- *
- * The Segmentation is performed using the ConnectedThresholdImageFilter. The seeds
- * are extracted from the image using the ImageToPointSetFilter. The thresolds are set
- * by using quantiles computed with the HistogramGenerator.
- *
- * \sa MorphologicalPyramidAnalyseFilter
- * \sa MorphologicalPyramidSynthesisFilter
- * \sa ResampleImageFilter
- * \sa LinearInterpolateImageFunction
- * \sa ScaleTransform
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage>
-class ITK_EXPORT Segmenter
- : public itk::ImageToImageFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef Segmenter Self;
- typedef itk::ImageToImageFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(Segmenter, ImageToImageFilter);
- /** Template parameters typedefs */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::PixelType InputPixelType;
- typedef typename InputImageType::Pointer InputImagePointerType;
- typedef TOutputImage OutputImageType;
- typedef typename OutputImageType::Pointer OutputImagePointerType;
- typedef typename OutputImageType::PixelType OutputPixelType;
- typedef typename OutputImageType::RegionType OutputImageRegionType;
- typedef typename OutputImageType::SizeType SizeType;
- typedef typename OutputImageType::SpacingType SpacingType;
-
- /** ImageDimension constants */
- itkStaticConstMacro(DetailsImageDimension, unsigned int,
- TInputImage::ImageDimension);
- itkStaticConstMacro(OriginalImageDimension, unsigned int,
- TInputImage::ImageDimension);
- itkStaticConstMacro(OutputImageDimension, unsigned int,
- TOutputImage::ImageDimension);
- /**
- * Set the details image.
- * \param detailsImage The details image from the morphological pyramid
- */
- void SetDetailsImage(const InputImageType * detailsImage);
- /**
- * Get the details image.
- * \return detailsImage The input details image.
- */
- InputImageType * GetDetailsImage(void);
- /**
- * Set the original image.
- * \param originalImage The original image to segment.
- */
- void SetOriginalImage(const InputImageType * originalImage);
- /**
- * Get the original image.
- * \return originalImage The original image to segment.
- */
- InputImageType * GetOriginalImage(void);
-
- /** Min object size parameter accessor */
- itkSetMacro(MinimumObjectSize, unsigned long);
- itkGetMacro(MinimumObjectSize, unsigned long);
- /** Quantile for seeds extraction */
- itkSetMacro(SeedsQuantile, double);
- itkGetMacro(SeedsQuantile, double);
- /** Quantile for connected thresholding */
- itkSetMacro(ConnectedThresholdQuantile, double);
- itkGetMacro(ConnectedThresholdQuantile, double);
- /** Toogle the darker detail segmentation */
- itkSetMacro(SegmentDarkDetailsBool, bool);
- itkGetMacro(SegmentDarkDetailsBool, bool);
- itkBooleanMacro(SegmentDarkDetailsBool);
- /** Get the number of segmented objects */
- itkGetMacro(NumberOfObjects, OutputPixelType);
-
-protected:
- /** Constructor */
- Segmenter();
- /** Destructor */
- ~Segmenter() override {}
- /** Main computation method */
- void GenerateData(void) override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /**
- * Configure the input datas.
- */
- void GenerateInputRequestedRegion(void) override;
- /**
- * Configure the output data.
- */
- using Superclass::EnlargeOutputRequestedRegion;
- void EnlargeOutputRequestedRegion(void);
-
-private:
- Segmenter(const Self &) = delete;
- void operator =(const Self&) = delete;
- /** Minimum size for the segmented object */
- unsigned long m_MinimumObjectSize;
- /** Quantile for seeds determination */
- double m_SeedsQuantile;
- /** Quantile to set the connectedThresholdFilter threshold */
- double m_ConnectedThresholdQuantile;
- /** Set to true if the details to segment are darker than background */
- bool m_SegmentDarkDetailsBool;
- /** Number of segmented objects */
- OutputPixelType m_NumberOfObjects;
-};
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidSegmenter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.hxx
deleted file mode 100644
index 555b483dd25bdc150964a02d9fc8dab61beb90ac..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSegmenter.hxx
+++ /dev/null
@@ -1,319 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSegmenter_hxx
-#define otbMorphologicalPyramidSegmenter_hxx
-
-#include "otbMorphologicalPyramidSegmenter.h"
-
-#include "otbImage.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkConnectedThresholdImageFilter.h"
-#include "itkConnectedComponentImageFilter.h"
-#include "itkRelabelComponentImageFilter.h"
-#include "itkThresholdImageFilter.h"
-#include "itkMultiplyImageFilter.h"
-#include "itkCastImageFilter.h"
-#include "itkInvertIntensityImageFilter.h"
-#include "itkRescaleIntensityImageFilter.h"
-#include "otbThresholdImageToPointSetFilter.h"
-#include "itkScalarImageToHistogramGenerator.h"
-#include "itkMinimumMaximumImageCalculator.h"
-
-namespace otb
-{
-namespace MorphologicalPyramid
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage>
-Segmenter<TInputImage, TOutputImage>
-::Segmenter()
-{
- this->SetNumberOfRequiredInputs(2);
- m_SeedsQuantile = 0.9;
- m_MinimumObjectSize = 10;
- m_SegmentDarkDetailsBool = false;
- m_NumberOfObjects = 0;
- m_ConnectedThresholdQuantile = 0.9;
-}
-/**
- * Set the details image.
- * \param detailsImage The details image from the morphological pyramid
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::SetDetailsImage(const InputImageType * detailsImage)
-{
- this->SetNthInput(0, const_cast<TInputImage *>(detailsImage));
-}
-/**
- * Set the details image.
- * \return detailsImage The input details image.
- */
-template <class TInputImage, class TOutputImage>
-typename Segmenter<TInputImage, TOutputImage>::InputImageType *
-Segmenter<TInputImage, TOutputImage>
-::GetDetailsImage(void)
-{
- return const_cast<InputImageType *>(this->GetInput(0));
-}
-/**
- * Set the original image.
- * \param originalImage The original image to segment.
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::SetOriginalImage(const InputImageType * originalImage)
-{
- this->SetNthInput(1, const_cast<TInputImage *>(originalImage));
-}
-/**
- * Get the original image.
- * \return originalImage The original image to segment.
- */
-template <class TInputImage, class TOutputImage>
-typename Segmenter<TInputImage, TOutputImage>::InputImageType *
-Segmenter<TInputImage, TOutputImage>
-::GetOriginalImage(void)
-{
- return const_cast<InputImageType *>(this->GetInput(1));
-}
-/**
- * Configure the input datas.
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::GenerateInputRequestedRegion()
-{
- // call the superclass' implementation of this method
- Superclass::GenerateInputRequestedRegion();
-
- // get pointers to the inputs
- InputImagePointerType detailsPtr =
- const_cast<InputImageType *>(this->GetInput(0));
-
- InputImagePointerType origPtr =
- const_cast<InputImageType *>(this->GetInput(1));
-
- if (!detailsPtr || !origPtr)
- {
- return;
- }
-
- // We need to
- // configure the inputs such that all the data is available.
- detailsPtr->SetRequestedRegion(detailsPtr->GetLargestPossibleRegion());
- origPtr->SetRequestedRegion(origPtr->GetLargestPossibleRegion());
-}
-/**
- * Configure the output data
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::EnlargeOutputRequestedRegion(void)
-{
- this->GetOutput()
- ->SetRequestedRegion(this->GetOutput()->GetLargestPossibleRegion());
-}
-
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::GenerateData()
-{
- // Input images pointers
- InputImagePointerType details = this->GetDetailsImage();
- InputImagePointerType original = this->GetOriginalImage();
-
- // Typedefs for details image enhancement
- typedef double FloatPixelType;
- typedef otb::Image<FloatPixelType, InputImageType::ImageDimension> FloatImageType;
- typedef itk::InvertIntensityImageFilter<InputImageType, InputImageType> InvertFilterType;
- typedef itk::MultiplyImageFilter<FloatImageType, FloatImageType, InputImageType> MultiplyFilterType;
- typedef itk::CastImageFilter<InputImageType, FloatImageType> CastImageFilterType;
- typedef itk::MinimumMaximumImageCalculator<InputImageType> MinMaxCalculatorType;
-
- //Typedefs for seeds extraction
- typedef itk::PointSet<InputPixelType, InputImageType::ImageDimension> PointSetType;
- typedef otb::ThresholdImageToPointSetFilter<InputImageType, PointSetType> PointSetFilterType;
- typedef typename PointSetType::PointsContainer::Iterator PointSetIteratorType;
-
- // Typedefs for segmentation
- typedef itk::ConnectedThresholdImageFilter<InputImageType, InputImageType> ConnectedFilterType;
- typedef itk::ConnectedComponentImageFilter<InputImageType, OutputImageType> LabelFilterType;
- typedef itk::RelabelComponentImageFilter<OutputImageType, OutputImageType> RelabelFilterType;
- typedef itk::ThresholdImageFilter<OutputImageType> ThresholdFilterType;
-
- // Typedefs for statistics computation
- typedef itk::Statistics::ScalarImageToHistogramGenerator<InputImageType> HistGeneratorType;
-
- /////////////////////////////////////
- //// Details image enhancement //////
- /////////////////////////////////////
-
- // Filters instantiation
- typename InvertFilterType::Pointer invert;
- typename CastImageFilterType::Pointer cast1 = CastImageFilterType::New();
- typename CastImageFilterType::Pointer cast2 = CastImageFilterType::New();
- typename MultiplyFilterType::Pointer mult = MultiplyFilterType::New();
- typename MinMaxCalculatorType::Pointer minMax = MinMaxCalculatorType::New();
-
- // Pipeline connection
- cast1->SetInput(details);
-
- minMax->SetImage(original);
- minMax->ComputeMaximum();
-
- // If we want to segment darker detail, the original image must have its itensity inverted
- if (m_SegmentDarkDetailsBool)
- {
- invert = InvertFilterType::New();
- invert->SetInput(original);
- invert->SetMaximum(minMax->GetMaximum());
- cast2->SetInput(invert->GetOutput());
- }
- else
- {
- cast2->SetInput(original);
- }
- mult->SetInput1(cast1->GetOutput());
- mult->SetInput2(cast2->GetOutput());
- mult->Update();
-
- /////////////////////////////////////
- //// Thresholds computation /////////
- /////////////////////////////////////
-
- // Filter instantiation
- typename HistGeneratorType::Pointer histogram = HistGeneratorType::New();
- // Seeds Threshold is computed from the quantile
- histogram->SetInput(details);
- histogram->SetNumberOfBins(255);
- histogram->SetMarginalScale(10.0);
- histogram->Compute();
- InputPixelType pointSetThreshold =
- static_cast<InputPixelType>(histogram->GetOutput()->Quantile(0, m_SeedsQuantile));
-
- // Segmentation Threshold is computed from the quantile
- histogram = HistGeneratorType::New();
- histogram->SetInput(mult->GetOutput());
- histogram->SetNumberOfBins(255);
- histogram->SetMarginalScale(10.0);
- histogram->Compute();
- InputPixelType connectedThresholdValue =
- static_cast<InputPixelType>(histogram->GetOutput()->Quantile(0, m_ConnectedThresholdQuantile));
-
- /////////////////////////////////////
- //// Seeds extraction ///////////////
- /////////////////////////////////////
-
- typename PointSetFilterType::Pointer pointSetFilter = PointSetFilterType::New();
- pointSetFilter->SetInput(0, details);
- pointSetFilter->SetLowerThreshold(pointSetThreshold);
- pointSetFilter->Update();
-
- /////////////////////////////////////
- //// Segmentation ///////////////////
- /////////////////////////////////////
-
- // Filters instantiation
- typename ConnectedFilterType::Pointer connectedThreshold = ConnectedFilterType::New();
- typename LabelFilterType::Pointer labeler = LabelFilterType::New();
- typename RelabelFilterType::Pointer relabeler = RelabelFilterType::New();
- typename ThresholdFilterType::Pointer threshold = ThresholdFilterType::New();
-
- //Passing seeds to the connected filter
- connectedThreshold = ConnectedFilterType::New();
- connectedThreshold->ClearSeeds();
- connectedThreshold->SetInput(mult->GetOutput());
- PointSetIteratorType it = pointSetFilter->GetOutput()->GetPoints()->Begin();
- while (it != pointSetFilter->GetOutput()->GetPoints()->End())
- {
- typename OutputImageType::IndexType index;
- index[0] = static_cast<long int>(it.Value()[0]);
- index[1] = static_cast<long int>(it.Value()[1]);
- connectedThreshold->AddSeed(index);
- ++it;
- }
-
- // segmentation
- connectedThreshold->SetLower(connectedThresholdValue);
-
- // labelling
- labeler = LabelFilterType::New();
- relabeler = RelabelFilterType::New();
- labeler->SetInput(connectedThreshold->GetOutput());
- relabeler->SetInput(labeler->GetOutput());
- relabeler->SetMinimumObjectSize(m_MinimumObjectSize);
- relabeler->Update();
-
- // In some cases it might happen that the whole extent of the image is segmented as a single region.
- // Since this is not desirable, we test this case here to avoid it.
- threshold = ThresholdFilterType::New();
- threshold->SetInput(relabeler->GetOutput());
- OutputPixelType num = 0;
- if (relabeler->GetNumberOfObjects() == 1)
- {
- unsigned int surface = mult->GetOutput()->GetLargestPossibleRegion().GetSize()[0]
- * mult->GetOutput()->GetLargestPossibleRegion().GetSize()[1];
- if (relabeler->GetSizeOfObjectsInPixels()[0] == surface)
- {
- num = 0;
- }
- else
- {
- num = 1;
- }
- }
- else
- {
- num = static_cast<OutputPixelType>(relabeler->GetNumberOfObjects());
- }
- threshold->ThresholdOutside(0, num);
-
- // Output connection
- threshold->GraftOutput(this->GetOutput());
- threshold->Update();
- this->GraftOutput(threshold->GetOutput());
- m_NumberOfObjects = num;
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage>
-void
-Segmenter<TInputImage, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-
-}
-} // End namespace MorphologicalPyramid
-} // End namespace otb
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.h b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.h
deleted file mode 100644
index 20a8f447aef515dbb646b154de76e1fe832bca29..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.h
+++ /dev/null
@@ -1,144 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSynthesisFilter_h
-#define otbMorphologicalPyramidSynthesisFilter_h
-
-#include "otbImageToImageListFilter.h"
-
-namespace otb
-{
-/**
- * \class MorphologicalPyramidSynthesisFilter
- * \brief Recomposition of the multiscale analysis performed with
- * a MorphologicalPyramidAnalyseFilter.
- *
- * Once a morphological pyramidal decompisition has been made, it is
- * possible to rebuild without any loss of information the original
- * image at full resolution. The MorphologicalPyramidsynthesisFilter
- * provides such a functionality. At each iteration, it performs the
- * up-sampling of the current image using the
- * otb::morphologicalPyramid::Resampler filter, the addition of
- * the details lost in down-sampling, and the addition of the details
- * lost in smoothing.
- *
- * \ingroup MultiScale
- * \sa MorphologicalPyramidAnalyseFilter
- * \sa MorphologicalPyramidResampler
- *
- * \ingroup OTBMorphologicalPyramid
- */
-template <class TInputImage, class TOutputImage>
-class ITK_EXPORT MorphologicalPyramidSynthesisFilter
- : public ImageToImageListFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard typedefs */
- typedef MorphologicalPyramidSynthesisFilter Self;
- typedef ImageToImageListFilter<TInputImage, TOutputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through object factory macro */
- itkNewMacro(Self);
- /** Type macro */
- itkTypeMacro(MorphologicalPyramidSynthesisFilter, MorphologicalPyramidSynthesisFilter);
- /** Input image dimension constant macro */
- itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
- /** Output related typedefs */
- typedef typename Superclass::OutputImageType OutputImageType;
- typedef typename Superclass::OutputImageListType OutputImageListType;
- typedef typename OutputImageListType::Pointer OutputImageListPointerType;
- typedef typename Superclass::OutputImagePointerType OutputImagePointerType;
- typedef typename Superclass::OutputImageListType::Iterator ImageListIterator;
- typedef typename Superclass::OutputImageListType::ReverseIterator ImageListReverseIterator;
- /** Input related typedefs */
- typedef typename Superclass::InputImageType InputImageType;
- typedef typename Superclass::InputImageRegionType InputImageRegionType;
- typedef typename InputImageType::Pointer InputImagePointer;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::SizeType SizeType;
- typedef typename InputImageType::ValueType ValueType;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::SpacingType SpacingType;
- typedef otb::ImageList<InputImageType> InputImageListType;
- typedef typename InputImageListType::Pointer InputImageListPointerType;
- /** Size vector typedefs */
- typedef std::vector<SizeType> SizeVectorType;
- typedef typename SizeVectorType::iterator SizeIterator;
- typedef typename SizeVectorType::reverse_iterator SizeReverseIterator;
- /**
- * Set The SupFilter details
- * \param imageList The brighter details extracted from the filtering operation.
- */
- void SetSupFilter(InputImageListType * imageList);
- /**
- * Set The InfFilter details
- * \param imageList The darker details extracted from the filtering operation.
- */
- void SetInfFilter(InputImageListType * imageList);
- /**
- * Set The SupDeci details
- * \param imageList The brighter details extracted from the filtering operation.
- */
- void SetSupDeci(InputImageListType * imageList);
- /**
- * Set The InfDeci details
- * \param imageList The darker details extracted from the filtering operation.
- */
- void SetInfDeci(InputImageListType * imageList);
- /**
- * Get The SupFilter details
- * \return The brighter details extracted from the filtering operation.
- */
- InputImageListType* GetSupFilter(void);
- /**
- * Get The InfFilter details
- * \return The darker details extracted from the filtering operation.
- */
- InputImageListType* GetInfFilter(void);
- /**
- * Get The SupDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- InputImageListType* GetSupDeci(void);
- /**
- * Get The InfDeci details
- * \return The brighter details extracted from the resampling operation.
- */
- InputImageListType* GetInfDeci(void);
-
-protected:
- /** Constructor */
- MorphologicalPyramidSynthesisFilter();
- /** Destructor */
- ~MorphologicalPyramidSynthesisFilter() override;
- void GenerateOutputInformation() override {} // does nothing
- /** Main computation method */
- void GenerateData() override;
- /** Printself method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbMorphologicalPyramidSynthesisFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.hxx b/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.hxx
deleted file mode 100644
index 3f8d81ccf76f316314434ba1c39437c007115289..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/include/otbMorphologicalPyramidSynthesisFilter.hxx
+++ /dev/null
@@ -1,260 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbMorphologicalPyramidSynthesisFilter_hxx
-#define otbMorphologicalPyramidSynthesisFilter_hxx
-
-#include "otbMorphologicalPyramidSynthesisFilter.h"
-
-#include "otbMorphologicalPyramidResampler.h"
-#include "itkSubtractImageFilter.h"
-#include "itkAddImageFilter.h"
-#include "itkImageDuplicator.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputImage>
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::MorphologicalPyramidSynthesisFilter()
-{
- this->SetNumberOfRequiredInputs(5);
-}
-/**
- * Destructor
- */
-template <class TInputImage, class TOutputImage>
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::~MorphologicalPyramidSynthesisFilter() {}
-/**
- * Set The SupFilter details
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::SetSupFilter(InputImageListType * imageList)
-{
- this->SetNthInput(1, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The InfFilter details
- * \param imageList The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::SetInfFilter(InputImageListType * imageList)
-{
- this->SetNthInput(2, const_cast<InputImageListType *>(imageList));
-}
-
-/**
- * Set The SupDeci details
- * \param imageList The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::SetSupDeci(InputImageListType * imageList)
-{
- this->SetNthInput(3, const_cast<InputImageListType *>(imageList));
-}
-/**
- * Set The InfDeci details
- * \param imageList The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::SetInfDeci(InputImageListType * imageList)
-{
- this->SetNthInput(4, const_cast<InputImageListType *>(imageList));
-}
-
-/**
- * Get The SupFilter details
- * \return The brighter details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::GetSupFilter(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(1));
-}
-/**
- * Get The InfFilter details
- * \return The darker details extracted from the filtering operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::GetInfFilter(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(2));
-}
-/**
- * Get The SupDeci details
- * \return The brighter details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::GetSupDeci(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(3));
-}
-/**
- * Get The InfDeci details
- * \return The darker details extracted from the resampling operation.
- */
-template <class TInputImage, class TOutputImage>
-typename MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::InputImageListType*
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::GetInfDeci(void)
-{
- return dynamic_cast<InputImageListType *>(this->itk::ProcessObject::GetInput(4));
-}
-/**
- * Main computation method
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::GenerateData(void)
-{
- otbMsgDevMacro(<< "MorphologicalPyramidSynthesisFilter : Entering main method.");
- // Input image pointer
- InputImageListType * supFilter = this->GetSupFilter();
- InputImageListType * infFilter = this->GetInfFilter();
- InputImageListType * supDeci = this->GetSupDeci();
- InputImageListType * infDeci = this->GetInfDeci();
-
- // Output pointer
- OutputImageListType * OutputImageList = this->GetOutput();
-
- // typedefs of the filters
- typedef itk::SubtractImageFilter<InputImageType, InputImageType, OutputImageType> SubtractFilterType;
- typedef itk::AddImageFilter<InputImageType, InputImageType, InputImageType> AddFilterType;
- typedef otb::MorphologicalPyramid::Resampler<InputImageType, InputImageType> ResamplerType;
- typedef itk::ImageDuplicator<InputImageType> DuplicatorType;
-
- // Input Image duplication to the currentImage Pointer
- typename DuplicatorType::Pointer duplicator = DuplicatorType::New();
- duplicator->SetInputImage(this->GetInput());
- duplicator->Update();
-
- // Input Image duplication to the currentImage Pointer
- typename InputImageType::Pointer currentImage = duplicator->GetOutput();
-
- // Filters declarations
- typename AddFilterType::Pointer add1, add2;
- typename SubtractFilterType::Pointer subtract1, subtract2;
- typename ResamplerType::Pointer resampler;
-
- // Size vector computation
- SizeVectorType size;
-
- ImageListIterator it = supFilter->Begin();
-
- while (it != supFilter->End())
- {
- size.push_back(it.Get()->GetLargestPossibleRegion().GetSize());
- ++it;
- }
- otbMsgDevMacro(<< "MorphologicalPyramidSynthesisFilter : Size vector computation OK");
-
- // Iterators definition
- ImageListReverseIterator itinfFilter = infFilter->ReverseBegin();
- ImageListReverseIterator itsupFilter = supFilter->ReverseBegin();
- ImageListReverseIterator itinfDeci = infDeci->ReverseBegin();
- ImageListReverseIterator itsupDeci = supDeci->ReverseBegin();
- SizeReverseIterator itSize = size.rbegin();
-
- int i = 1;
-//--------------------------------------------------------//
-// Main loop //
-//--------------------------------------------------------//
- while (itinfFilter != infFilter->ReverseEnd()
- && itsupFilter != supFilter->ReverseEnd()
- && itinfDeci != infDeci->ReverseEnd()
- && itsupDeci != supDeci->ReverseEnd()
- && itSize != size.rend())
- {
-
- ++i;
- // Upsampling current image
- resampler = ResamplerType::New();
- resampler->SetSize(*itSize);
- resampler->SetInput(currentImage);
- resampler->Update();
- otbMsgDevMacro(<< "MorphologicalPyramidSynthesisFilter: step " << i << " Upsampling OK");
- // Adding *sup details from current level
- add1 = AddFilterType::New();
- add1->SetInput1(resampler->GetOutput());
- add1->SetInput2(itsupFilter.Get());
- add2 = AddFilterType::New();
- add2->SetInput1(add1->GetOutput());
- add2->SetInput2(itsupDeci.Get());
-
- // Adding *inf details from current level
- subtract1 = SubtractFilterType::New();
- subtract1->SetInput1(add2->GetOutput());
- subtract1->SetInput2(itinfFilter.Get());
- subtract2 = SubtractFilterType::New();
- subtract2->SetInput1(subtract1->GetOutput());
- subtract2->SetInput2(itinfDeci.Get());
- subtract2->Update();
- otbMsgDevMacro(<< "MorphologicalPyramidSynthesisFilter: step " << i << " Details addition OK");
-
- // Updating current image
- currentImage = subtract2->GetOutput();
- OutputImageList->PushBack(currentImage);
-
- // Iterators incrementation
- ++itsupFilter;
- ++itinfFilter;
- ++itsupDeci;
- ++itinfDeci;
- ++itSize;
- }
- otbMsgDevMacro(<< "MorphologicalPyramidSynthesisFilter: Exiting main method.");
-}
-/**
- * PrintSelf method
- */
-template <class TInputImage, class TOutputImage>
-void
-MorphologicalPyramidSynthesisFilter<TInputImage, TOutputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-
-#endif
diff --git a/Modules/Filtering/MorphologicalPyramid/otb-module.cmake b/Modules/Filtering/MorphologicalPyramid/otb-module.cmake
deleted file mode 100644
index 677f456dbaf8e456576007b5ba645deeb8e4a3f0..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/otb-module.cmake
+++ /dev/null
@@ -1,43 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "If the smoothing filter used in the pyramidal analysis is a
-morphological filter, one cannot safely subsample the filtered image without loss
-of information. However, by keeping the details possibly lost in the
-down-sampling operation, such a decomposition can be used. The Morphological Pyramid is an
-approach to such a decomposition. This module contains classes useful in meeting
-that goal.")
-
-otb_module(OTBMorphologicalPyramid
- DEPENDS
- OTBCommon
- OTBITK
- OTBImageBase
- OTBObjectList
- OTBPointSet
-
- TEST_DEPENDS
- OTBImageIO
- OTBMorphologicalProfiles
- OTBTestKernel
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Filtering/MorphologicalPyramid/test/CMakeLists.txt b/Modules/Filtering/MorphologicalPyramid/test/CMakeLists.txt
deleted file mode 100644
index 90bf757fdcb09ac89bbd1b9deb5899cd11f81b1f..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/CMakeLists.txt
+++ /dev/null
@@ -1,148 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBMorphologicalPyramidTests
-otbMorphologicalPyramidTestDriver.cxx
-otbMorphologicalPyramidAnalysisFilter.cxx
-otbMorphologicalPyramidSegmenter.cxx
-otbMorphologicalPyramidSynthesisFilter.cxx
-otbMorphologicalPyramidMRToMSConverter.cxx
-otbMorphologicalPyramidResampler.cxx
-otbMorphologicalPyramidSegmentationFilter.cxx
-)
-
-add_executable(otbMorphologicalPyramidTestDriver ${OTBMorphologicalPyramidTests})
-target_link_libraries(otbMorphologicalPyramidTestDriver ${OTBMorphologicalPyramid-Test_LIBRARIES})
-otb_module_target_label(otbMorphologicalPyramidTestDriver)
-
-# Tests Declaration
-
-otb_add_test(NAME msTvMorphoPyrAnalysisFilter COMMAND otbMorphologicalPyramidTestDriver
- --compare-n-images ${NOTOL} 5
- ${BASELINE}/msPyrAn_mire_log_an_2.png
- ${TEMP}/msPyrAn_mire_log_an_2.png
- ${BASELINE}/msPyrAn_mire_log_sf_2.png
- ${TEMP}/msPyrAn_mire_log_sf_2.png
- ${BASELINE}/msPyrAn_mire_log_if_2.png
- ${TEMP}/msPyrAn_mire_log_if_2.png
- ${BASELINE}/msPyrAn_mire_log_sd_2.png
- ${TEMP}/msPyrAn_mire_log_sd_2.png
- ${BASELINE}/msPyrAn_mire_log_id_2.png
- ${TEMP}/msPyrAn_mire_log_id_2.png
- otbMorphologicalPyramidAnalysisFilter
- ${INPUTDATA}/mire_log.png
- ${TEMP}/msPyrAn_mire_log
- png
- 2
- 2.0)
-
-otb_add_test(NAME msTvMorphoPyrSegmentBright COMMAND otbMorphologicalPyramidTestDriver
- --compare-image ${NOTOL}
- ${BASELINE}/msPyrSegmenter_IKO_Halles_4_2_sf.tif
- ${TEMP}/msPyrSegmenter_IKO_Halles_4_2_sf.tif
- otbMorphologicalPyramidSegmenter
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_sf_full.tif
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrSegmenter_IKO_Halles_4_2_sf.tif
- 0
- 0.9
- 0.9
- 10
- )
-set_property(TEST msTvMorphoPyrSegmentBright PROPERTY DEPENDS msTvMorphoPyrMRToMSConverter)
-
-otb_add_test(NAME msTvMorphoPyrSegmentDark COMMAND otbMorphologicalPyramidTestDriver
- --compare-image ${NOTOL}
- ${BASELINE}/msPyrSegmenter_IKO_Halles_4_2_if.tif
- ${TEMP}/msPyrSegmenter_IKO_Halles_4_2_if.tif
- otbMorphologicalPyramidSegmenter
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_if_full.tif
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrSegmenter_IKO_Halles_4_2_if.tif
- 1
- 0.9
- 0.9
- 10
- )
-set_property(TEST msTvMorphoPyrSegmentDark PROPERTY DEPENDS msTvMorphoPyrMRToMSConverter)
-
-otb_add_test(NAME msTvMorphoPyrSynthesisFilter COMMAND otbMorphologicalPyramidTestDriver
- --compare-image ${NOTOL}
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrSynth_IKO_Halles_4_2.tif
- otbMorphologicalPyramidSynthesisFilter
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrSynth_IKO_Halles_4_2.tif
- 4
- 2.0)
-
-otb_add_test(NAME msTvMorphoPyrMRToMSConverter COMMAND otbMorphologicalPyramidTestDriver
- --compare-n-images ${EPSILON_8} 3
- ${BASELINE}/msPyrMRToMS_IKO_Halles_4_2_sf_full.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_sf_full.tif
- ${BASELINE}/msPyrMRToMS_IKO_Halles_4_2_if_full.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_if_full.tif
- ${BASELINE}/msPyrMRToMS_IKO_Halles_4_2_an_full.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_an_full.tif
- otbMorphologicalPyramidMRToMSConverter
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_sf_full.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_if_full.tif
- ${TEMP}/msPyrMRToMS_IKO_Halles_4_2_an_full.tif
- 4
- 2.0)
-
-otb_add_test(NAME msTvMorphoPyrResampler COMMAND otbMorphologicalPyramidTestDriver
- --compare-n-images ${EPSILON_8} 2
- ${BASELINE}/msPyrResampler_IKO_LesHalles_256_2.tif
- ${TEMP}/msPyrResampler_IKO_LesHalles_256_2.tif
- ${BASELINE}/msPyrResampler_IKO_LesHalles_full.tif
- ${TEMP}/msPyrResampler_IKO_LesHalles_full.tif
- otbMorphologicalPyramidResampler
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrResampler_IKO_LesHalles_256_2.tif
- ${TEMP}/msPyrResampler_IKO_LesHalles_full.tif
- 256
- 256
- )
-
-otb_add_test(NAME msTvMorphoPyrSegmentationFilter COMMAND otbMorphologicalPyramidTestDriver
- --compare-n-images ${NOTOL} 4
- ${BASELINE}/msPyrSegmentation_IKO_Halles_2.tif
- ${TEMP}/msPyrSegmentation_IKO_Halles_2.tif
- ${BASELINE}/msPyrSegmentation_IKO_Halles_4.tif
- ${TEMP}/msPyrSegmentation_IKO_Halles_4.tif
- ${BASELINE}/msPyrSegmentation_IKO_Halles_5.tif
- ${TEMP}/msPyrSegmentation_IKO_Halles_5.tif
- ${BASELINE}/msPyrSegmentation_IKO_Halles_7.tif
- ${TEMP}/msPyrSegmentation_IKO_Halles_7.tif
- otbMorphologicalPyramidSegmentationFilter
- ${INPUTDATA}/ROI_IKO_PAN_LesHalles.tif
- ${TEMP}/msPyrSegmentation_IKO_Halles_
- tif
- 4
- 2.0
- 0.9
- 0.9
- 10
- )
-
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidAnalysisFilter.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidAnalysisFilter.cxx
deleted file mode 100644
index c2704c3627f73b4d0a830b6fdaf65a4d46cb44fe..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidAnalysisFilter.cxx
+++ /dev/null
@@ -1,121 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbMorphologicalPyramidAnalysisFilter.h"
-#include "otbOpeningClosingMorphologicalFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidAnalysisFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * inputFilename = argv[1];
- const char * outputFilenamePrefix = argv[2];
- const char * outputFilenameSuffix = argv[3];
- const unsigned int numberOfLevels = atoi(argv[4]);
- const float decimationRatio = atof(argv[5]);
-
- const unsigned int Dimension = 2;
- typedef unsigned char InputPixelType;
- typedef unsigned char OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef itk::BinaryBallStructuringElement<InputPixelType, Dimension> StructuringElementType;
- typedef otb::OpeningClosingMorphologicalFilter<InputImageType, InputImageType, StructuringElementType>
- OpeningClosingFilterType;
- typedef otb::MorphologicalPyramidAnalysisFilter<InputImageType, OutputImageType, OpeningClosingFilterType>
- PyramidFilterType;
- typedef PyramidFilterType::OutputImageListType::Iterator ImageListIterator;
-
- // Reading input image
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
-
- // Instantiation
- PyramidFilterType::Pointer pyramid = PyramidFilterType::New();
- pyramid->SetNumberOfLevels(numberOfLevels);
- pyramid->SetDecimationRatio(decimationRatio);
- pyramid->SetInput(reader->GetOutput());
- pyramid->Update();
-
- // Retrieving iterators on the results images
- ImageListIterator itAnalyse = pyramid->GetOutput()->Begin();
- ImageListIterator itSupFilter = pyramid->GetSupFilter()->Begin();
- ImageListIterator itInfFilter = pyramid->GetInfFilter()->Begin();
- ImageListIterator itInfDeci = pyramid->GetInfDeci()->Begin();
- ImageListIterator itSupDeci = pyramid->GetSupDeci()->Begin();
-
- WriterType::Pointer writer = WriterType::New();
-
- int i = 1;
- // std::stringstream oss;
- std::ostringstream oss;
- // Writing the results images
- while ((itAnalyse != pyramid->GetOutput()->End())
- && (itSupFilter != pyramid->GetSupFilter()->End())
- && (itInfFilter != pyramid->GetInfFilter()->End())
- && (itInfDeci != pyramid->GetInfDeci()->End())
- && (itSupDeci != pyramid->GetSupDeci()->End())
- )
- {
- oss << outputFilenamePrefix << "_an_" << i << "." << outputFilenameSuffix;
- writer->SetInput(itAnalyse.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- oss.str("");
- oss << outputFilenamePrefix << "_sf_" << i << "." << outputFilenameSuffix;
- writer->SetInput(itSupFilter.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- oss.str("");
- oss << outputFilenamePrefix << "_if_" << i << "." << outputFilenameSuffix;
- writer->SetInput(itInfFilter.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- oss.str("");
- oss << outputFilenamePrefix << "_id_" << i << "." << outputFilenameSuffix;
- writer->SetInput(itInfDeci.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- std::cout << "File " << oss.str() << " written" << std::endl;
- oss.str("");
- oss << outputFilenamePrefix << "_sd_" << i << "." << outputFilenameSuffix;
- writer->SetInput(itSupDeci.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- oss.str("");
- ++itAnalyse;
- ++itSupFilter;
- ++itInfFilter;
- ++itInfDeci;
- ++itSupDeci;
- ++i;
- }
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidMRToMSConverter.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidMRToMSConverter.cxx
deleted file mode 100644
index cfc82520f07c0d3996c88da2a996b42b1058f4b2..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidMRToMSConverter.cxx
+++ /dev/null
@@ -1,93 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbMorphologicalPyramidAnalysisFilter.h"
-#include "otbMorphologicalPyramidMRToMSConverter.h"
-#include "otbOpeningClosingMorphologicalFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidMRToMSConverter(int itkNotUsed(argc), char * argv[])
-{
- const char * inputFilename = argv[1];
- const char * outputFilename1 = argv[2];
- const char * outputFilename2 = argv[3];
- const char * outputFilename3 = argv[4];
- const unsigned int numberOfLevels = atoi(argv[5]);
- const float decimationRatio = atof(argv[6]);
-
- const unsigned int Dimension = 2;
- typedef double InputPixelType;
- typedef double OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef itk::BinaryBallStructuringElement<InputPixelType, Dimension> StructuringElementType;
- typedef otb::OpeningClosingMorphologicalFilter<InputImageType, InputImageType, StructuringElementType>
- OpeningClosingFilterType;
- typedef otb::MorphologicalPyramidAnalysisFilter<InputImageType, InputImageType, OpeningClosingFilterType>
- PyramidAnalysisFilterType;
- typedef otb::MorphologicalPyramid::MRToMSConverter<InputImageType, OutputImageType> MRToMSConverterType;
-
- // Reading input image
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
-
- // Analysis
- PyramidAnalysisFilterType::Pointer pyramidAnalysis = PyramidAnalysisFilterType::New();
- pyramidAnalysis->SetNumberOfLevels(numberOfLevels);
- pyramidAnalysis->SetDecimationRatio(decimationRatio);
- pyramidAnalysis->SetInput(reader->GetOutput());
-
- // From multi resolution to multi scale
- MRToMSConverterType::Pointer mrtoms = MRToMSConverterType::New();
- mrtoms->SetInput(pyramidAnalysis->GetOutput());
- mrtoms->SetSupFilter(pyramidAnalysis->GetSupFilter());
- mrtoms->SetSupDeci(pyramidAnalysis->GetSupDeci());
- mrtoms->SetInfFilter(pyramidAnalysis->GetInfFilter());
- mrtoms->SetInfDeci(pyramidAnalysis->GetInfDeci());
- mrtoms->Update();
-
- // Writing the output images
- WriterType::Pointer writer1 = WriterType::New();
- writer1->SetFileName(outputFilename1);
- writer1->SetInput(mrtoms->GetSupFilterFullResolution()->Back());
- writer1->Update();
-
- WriterType::Pointer writer2 = WriterType::New();
- writer2->SetFileName(outputFilename2);
- writer2->SetInput(mrtoms->GetInfFilterFullResolution()->Back());
- writer2->Update();
-
- WriterType::Pointer writer3 = WriterType::New();
- writer3->SetFileName(outputFilename3);
- writer3->SetInput(mrtoms->GetOutput()->Back());
- writer3->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidResampler.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidResampler.cxx
deleted file mode 100644
index 0d43971cf29e675072a0437c1f9e2f91a6d805e6..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidResampler.cxx
+++ /dev/null
@@ -1,77 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbMorphologicalPyramidResampler.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidResampler(int itkNotUsed(argc), char * argv[])
-{
- const char* inputFilename = argv[1];
- const char* outputFilename1 = argv[2];
- const char* outputFilename2 = argv[3];
- const unsigned int size_x = atoi(argv[4]);
- const unsigned int size_y = atoi(argv[5]);
-
- const unsigned int Dimension = 2;
- typedef double InputPixelType;
- typedef double OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef otb::MorphologicalPyramid::Resampler<InputImageType, OutputImageType>
- ResamplerType;
-
- // Input image reading
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
-
- InputImageType::SizeType size;
- size[0] = size_x;
- size[1] = size_y;
-
- // Instantiation
- ResamplerType::Pointer resampler = ResamplerType::New();
- resampler->SetInput(reader->GetOutput());
- resampler->SetSize(size);
-
- // File writing
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(resampler->GetOutput());
- writer->SetFileName(outputFilename1);
- writer->Update();
-
- ResamplerType::Pointer resampler2 = ResamplerType::New();
- resampler2->SetInput(resampler->GetOutput());
- resampler2->SetSize(reader->GetOutput()->GetLargestPossibleRegion().GetSize());
-
- WriterType::Pointer writer2 = WriterType::New();
- writer2->SetInput(resampler2->GetOutput());
- writer2->SetFileName(outputFilename2);
- writer2->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmentationFilter.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmentationFilter.cxx
deleted file mode 100644
index 959150db21b47e4ddd2131fe26736ff19a11a6a5..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmentationFilter.cxx
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbMorphologicalPyramidSegmentationFilter.h"
-#include "otbOpeningClosingMorphologicalFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "otbMorphologicalPyramidAnalysisFilter.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidSegmentationFilter(int itkNotUsed(argc), char * argv[])
-{
- const char* inputFilename = argv[1];
- const char* outputFilenamePrefix = argv[2];
- const char * outputFilenameSuffix = argv[3];
- const unsigned int numberOfLevels = atoi(argv[4]);
- const double decimationRatio = atof(argv[5]);
- const float seedsQuantile = atof(argv[6]);
- const float segmentationQuantile = atof(argv[7]);
- const unsigned int minObjectSize = atoi(argv[8]);
-
- const unsigned int Dimension = 2;
- typedef double InputPixelType;
- typedef unsigned short OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef itk::BinaryBallStructuringElement<InputPixelType, Dimension> StructuringElementType;
- typedef otb::OpeningClosingMorphologicalFilter<InputImageType, InputImageType, StructuringElementType>
- OpeningClosingFilterType;
- typedef otb::MorphologicalPyramidAnalysisFilter<InputImageType, InputImageType, OpeningClosingFilterType>
- PyramidFilterType;
- typedef otb::MorphologicalPyramidSegmentationFilter<InputImageType, OutputImageType>
- SegmentationFilterType;
- typedef SegmentationFilterType::OutputImageListIteratorType OutputListIteratorType;
-
- // Input images reading
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
-
- //Analyse
- PyramidFilterType::Pointer pyramid = PyramidFilterType::New();
- pyramid->SetNumberOfLevels(numberOfLevels);
- pyramid->SetDecimationRatio(decimationRatio);
- pyramid->SetInput(reader->GetOutput());
-
- // Segmentation
- SegmentationFilterType::Pointer segmentation = SegmentationFilterType::New();
- segmentation->SetReferenceImage(reader->GetOutput());
- segmentation->SetBrighterDetails(pyramid->GetSupFilter());
- segmentation->SetDarkerDetails(pyramid->GetInfFilter());
- segmentation->SetSeedsQuantile(seedsQuantile);
- segmentation->SetConnectedThresholdQuantile(segmentationQuantile);
- segmentation->SetMinimumObjectSize(minObjectSize);
- segmentation->Update();
-
- // Output writing
- OutputListIteratorType it = segmentation->GetOutput()->Begin();
- WriterType::Pointer writer;
- int index = 1;
- std::stringstream oss;
- while (it != segmentation->GetOutput()->End())
- {
- oss << outputFilenamePrefix << index << "." << outputFilenameSuffix;
- writer = WriterType::New();
- writer->SetInput(it.Get());
- writer->SetFileName(oss.str());
- writer->Update();
- std::cout << oss.str() << " file written." << std::endl;
- oss.str("");
- ++index;
- ++it;
- }
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmenter.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmenter.cxx
deleted file mode 100644
index 12b2ac54df9a3ec70a7e2d8490ed48f1fc2bff51..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSegmenter.cxx
+++ /dev/null
@@ -1,72 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbMorphologicalPyramidSegmenter.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidSegmenter(int itkNotUsed(argc), char * argv[])
-{
- const char* inputFilename = argv[1];
- const char* originalFilename = argv[2];
- const char* outputFilename1 = argv[3];
- const bool segmentDark = atoi(argv[4]);
- const float seedsQuantile = atof(argv[5]);
- const float segmentationQuantile = atof(argv[6]);
- const unsigned int minObjectSize = atoi(argv[7]);
-
- const unsigned int Dimension = 2;
- typedef double InputPixelType;
- typedef unsigned short OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef otb::MorphologicalPyramid::Segmenter<InputImageType, OutputImageType>
- SegmenterType;
-
- // Input images reading
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
- ReaderType::Pointer reader2 = ReaderType::New();
- reader2->SetFileName(originalFilename);
-
- // Instantiation
- SegmenterType::Pointer segmenter = SegmenterType::New();
- segmenter->SetDetailsImage(reader->GetOutput());
- segmenter->SetOriginalImage(reader2->GetOutput());
- segmenter->SetSegmentDarkDetailsBool(segmentDark);
- segmenter->SetSeedsQuantile(seedsQuantile);
- segmenter->SetConnectedThresholdQuantile(segmentationQuantile);
- segmenter->SetMinimumObjectSize(minObjectSize);
-
- // File writing
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(segmenter->GetOutput());
- writer->SetFileName(outputFilename1);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSynthesisFilter.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSynthesisFilter.cxx
deleted file mode 100644
index 084ba8bd43b89bd77f8b326dddf1b231725f3eec..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidSynthesisFilter.cxx
+++ /dev/null
@@ -1,83 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-
-#include "otbMorphologicalPyramidAnalysisFilter.h"
-#include "otbMorphologicalPyramidSynthesisFilter.h"
-#include "otbOpeningClosingMorphologicalFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbImage.h"
-
-int otbMorphologicalPyramidSynthesisFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * inputFilename = argv[1];
- const char * outputFilename = argv[2];
- const unsigned int numberOfLevels = atoi(argv[3]);
- const float decimationRatio = atof(argv[4]);
-
- const unsigned int Dimension = 2;
- typedef unsigned char InputPixelType;
- typedef unsigned char OutputPixelType;
-
- typedef otb::Image<InputPixelType, Dimension> InputImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
-
- typedef otb::ImageFileReader<InputImageType> ReaderType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
-
- typedef itk::BinaryBallStructuringElement<InputPixelType, Dimension> StructuringElementType;
- typedef otb::OpeningClosingMorphologicalFilter<InputImageType, InputImageType, StructuringElementType>
- OpeningClosingFilterType;
- typedef otb::MorphologicalPyramidAnalysisFilter<InputImageType, OutputImageType, OpeningClosingFilterType>
- PyramidAnalysisFilterType;
- typedef otb::MorphologicalPyramidSynthesisFilter<InputImageType, OutputImageType>
- PyramidSynthesisFilterType;
-
- // Reading input image
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(inputFilename);
-
- // Analysis
- PyramidAnalysisFilterType::Pointer pyramidAnalysis = PyramidAnalysisFilterType::New();
- pyramidAnalysis->SetNumberOfLevels(numberOfLevels);
- pyramidAnalysis->SetDecimationRatio(decimationRatio);
- pyramidAnalysis->SetInput(reader->GetOutput());
- pyramidAnalysis->Update();
-
- // Synthesis
- PyramidSynthesisFilterType::Pointer pyramidSynthesis = PyramidSynthesisFilterType::New();
- pyramidSynthesis->SetInput(pyramidAnalysis->GetOutput()->Back());
- pyramidSynthesis->SetSupFilter(pyramidAnalysis->GetSupFilter());
- pyramidSynthesis->SetSupDeci(pyramidAnalysis->GetSupDeci());
- pyramidSynthesis->SetInfFilter(pyramidAnalysis->GetInfFilter());
- pyramidSynthesis->SetInfDeci(pyramidAnalysis->GetInfDeci());
- pyramidSynthesis->Update();
-
- // Writing the output image
- WriterType::Pointer writer = WriterType::New();
- writer->SetFileName(outputFilename);
- writer->SetInput(pyramidSynthesis->GetOutput()->Back());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidTestDriver.cxx b/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidTestDriver.cxx
deleted file mode 100644
index 7eae072f41716ed76033b26bbd70d0592fd0ce36..0000000000000000000000000000000000000000
--- a/Modules/Filtering/MorphologicalPyramid/test/otbMorphologicalPyramidTestDriver.cxx
+++ /dev/null
@@ -1,31 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbMorphologicalPyramidAnalysisFilter);
- REGISTER_TEST(otbMorphologicalPyramidSegmenter);
- REGISTER_TEST(otbMorphologicalPyramidSynthesisFilter);
- REGISTER_TEST(otbMorphologicalPyramidMRToMSConverter);
- REGISTER_TEST(otbMorphologicalPyramidResampler);
- REGISTER_TEST(otbMorphologicalPyramidSegmentationFilter);
-}
diff --git a/Modules/Filtering/Path/include/otbVectorizationPathListFilter.h b/Modules/Filtering/Path/include/otbVectorizationPathListFilter.h
deleted file mode 100644
index 5ca5b65c5285040ec2079884721d9ec09de46ca5..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Path/include/otbVectorizationPathListFilter.h
+++ /dev/null
@@ -1,150 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorizationPathListFilter_h
-#define otbVectorizationPathListFilter_h
-
-#include "otbPathListSource.h"
-#include "itkImageRegionIterator.h"
-#include "itkNeighborhoodIterator.h"
-#include "itkConstantBoundaryCondition.h"
-#include "otbImage.h"
-
-namespace otb
-{
-/** \class VectorizationPathListFilter
- * \brief This filter performs a vectorization from a line detector modulus and direction outputs.
- *
- * The output of this filter is an otb::ObjectList<TOutputPath>.
- *
- * This filter performs vectorization at non-grid position by using the barycenter of the few pixels with
- * non-null intensity in the given direction. A threshold can be set to tune the sensibility of the first point
- * detection. Path with less than three vertices are not kept by the filter.
- *
- * \ingroup PathListSource
- *
- * \ingroup OTBPath
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-class ITK_EXPORT VectorizationPathListFilter
- : public PathListSource<TOutputPath>
-{
-public:
- /** Standard typedefs */
- typedef VectorizationPathListFilter Self;
- typedef PathListSource<TOutputPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(VectorizationPathListFilter, PathListSource);
-
- /** Template parameters typedefs */
- typedef TInputModulus InputModulusType;
- typedef typename InputModulusType::ConstPointer InputModulusConstPointerType;
- typedef typename InputModulusType::PixelType InputPixelType;
- typedef typename InputModulusType::PointType PointType;
- typedef typename InputModulusType::IndexType IndexType;
-
- typedef TInputDirection InputDirectionType;
- typedef typename InputDirectionType::ConstPointer InputDirectionConstPointerType;
- typedef TOutputPath OutputPathType;
- typedef typename OutputPathType::Pointer OutputPathPointerType;
- typedef typename OutputPathType::ContinuousIndexType VertexType;
-
- /** Derived typedefs */
- typedef typename Superclass::OutputPathListType OutputPathListType;
- typedef typename Superclass::OutputPathListPointerType OutputPathListPointerType;
-
- /** Set/get the input modulus */
- using Superclass::SetInput;
- void SetInput(InputModulusType * inputModulus);
- const InputModulusType * GetInput(void);
-
- /** Set/get the input direction */
- void SetInputDirection(InputDirectionType * inputDirection);
- const InputDirectionType * GetInputDirection(void);
-
- itkSetMacro(AmplitudeThreshold, InputPixelType);
- itkGetMacro(AmplitudeThreshold, InputPixelType);
-
-protected:
-
- /** Other internal useful typedefs */
- typedef otb::Image<bool, InputModulusType::ImageDimension> FlagImageType;
- typedef typename FlagImageType::Pointer FlagImagePointerType;
-
- typedef itk::ImageRegionConstIterator<InputModulusType> ModRegionIteratorType;
- typedef itk::ImageRegionConstIterator<InputDirectionType> DirRegionIteratorType;
- typedef itk::ImageRegionIterator<FlagImageType> FlagRegionIteratorType;
-
- typedef itk::ConstantBoundaryCondition<InputModulusType> ModBCType;
- typedef itk::ConstantBoundaryCondition<InputDirectionType> DirBCType;
- typedef itk::ConstantBoundaryCondition<FlagImageType> FlagBCType;
-
- typedef itk::ConstNeighborhoodIterator<InputModulusType, ModBCType> ModNeighborhoodIteratorType;
- typedef itk::ConstNeighborhoodIterator<InputDirectionType, ModBCType> DirNeighborhoodIteratorType;
- typedef itk::NeighborhoodIterator<FlagImageType, FlagBCType> FlagNeighborhoodIteratorType;
-
- typedef typename ModNeighborhoodIteratorType::RadiusType RadiusType;
- typedef typename ModNeighborhoodIteratorType::OffsetType OffsetType;
- typedef std::vector<OffsetType> OffsetVectorType;
-
- typedef typename OutputPathType::VertexListType VertexListType;
- typedef typename VertexListType::ConstPointer VertexListPointerType;
- typedef typename VertexListType::ConstIterator VertexIteratorType;
-
- /** Constructor */
- VectorizationPathListFilter();
- /** Destructor */
- ~VectorizationPathListFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData(void) override;
- /**
- * Compute a vector of the 8 neighbors to explore from the direction and the type of search (forward or backward).
- * \param direction The direction
- * \param flagReverse The type of search
- * \return The neighborhood vector
- */
- OffsetVectorType GetEightNeighborOffsetFromDirection(double direction, unsigned int flagReverse);
- /**
- * Compute a vector of the 3 neighbors to explore from the direction and the type of search (forward or backward).
- * \param direction The direction
- * \param flagReverse The type of search
- * \return The neighborhood vector
- */
- OffsetVectorType GetThreeNeighborOffsetFromDirection(double direction, unsigned int flagReverse);
-private:
- VectorizationPathListFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
- /** Amplitude threshold to start following a path */
- InputPixelType m_AmplitudeThreshold;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbVectorizationPathListFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/Path/include/otbVectorizationPathListFilter.hxx b/Modules/Filtering/Path/include/otbVectorizationPathListFilter.hxx
deleted file mode 100644
index 66ac753b113d61519262f03e0dbf29c4eaf60c38..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Path/include/otbVectorizationPathListFilter.hxx
+++ /dev/null
@@ -1,677 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorizationPathListFilter_hxx
-#define otbVectorizationPathListFilter_hxx
-
-#include "otbVectorizationPathListFilter.h"
-#include "otbMacro.h"
-#include "otbMath.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::VectorizationPathListFilter()
-{
- this->SetNumberOfRequiredInputs(2);
- this->SetNumberOfRequiredInputs(2);
- m_AmplitudeThreshold = 1.0;
-}
-
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-void
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::SetInput(InputModulusType * inputModulus)
-{
- this->itk::ProcessObject::SetNthInput(0, const_cast<InputModulusType *>(inputModulus));
-}
-
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-const typename VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::InputModulusType *
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::GetInput(void)
-{
- if (this->GetNumberOfInputs() < 1)
- {
- return nullptr;
- }
- return static_cast<const TInputModulus*>(this->itk::ProcessObject::GetInput(0));
-}
-
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-void
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::SetInputDirection(InputDirectionType * inputDirection)
-{
- this->itk::ProcessObject::SetNthInput(1, const_cast<InputDirectionType *>(inputDirection));
-}
-
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-const typename VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::InputDirectionType *
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::GetInputDirection(void)
-{
- if (this->GetNumberOfInputs() < 2)
- {
- return nullptr;
- }
- return static_cast<const TInputDirection *>(this->itk::ProcessObject::GetInput(1));
-}
-
-/**
- * Main computation method
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-void
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::GenerateData(void)
-{
- InputModulusConstPointerType modPtr = this->GetInput();
- InputDirectionConstPointerType dirPtr = this->GetInputDirection();
- OutputPathListPointerType outPtr = this->GetOutput();
-
- typedef typename OffsetVectorType::iterator OffsetIteratorType;
-
- RadiusType radius;
- radius.Fill(2);
- OffsetVectorType offsetVector;
-
- // Creation of the flag image
- FlagImagePointerType flagImage = FlagImageType::New();
- flagImage->SetRegions(modPtr->GetLargestPossibleRegion());
- flagImage->Allocate();
- flagImage->FillBuffer(false);
-
- // Iterators instantiation
- ModRegionIteratorType modIt(modPtr, modPtr->GetLargestPossibleRegion());
- DirRegionIteratorType dirIt(dirPtr, dirPtr->GetLargestPossibleRegion());
- FlagRegionIteratorType flagIt(flagImage, flagImage->GetLargestPossibleRegion());
-
- for (modIt.GoToBegin(), dirIt.GoToBegin(), flagIt.GoToBegin();
- (!modIt.IsAtEnd()) && (!dirIt.IsAtEnd()) && (!flagIt.IsAtEnd());
- ++modIt, ++dirIt, ++flagIt)
- {
- if ((modIt.Get() > m_AmplitudeThreshold) && (!flagIt.Get()))
- {
- //this is a beginning, to follow in two directions
- OutputPathPointerType pathTempDirect = OutputPathType::New();
- OutputPathPointerType pathTempReverse = OutputPathType::New();
- OutputPathPointerType path = OutputPathType::New();
-
- bool flagFinish;
- int flagReverse = 0;
- double totalAmplitude = 0;
-
- ModNeighborhoodIteratorType nModIt(radius, modPtr, modPtr->GetLargestPossibleRegion());
- DirNeighborhoodIteratorType nDirIt(radius, dirPtr, dirPtr->GetLargestPossibleRegion());
- FlagNeighborhoodIteratorType nFlagIt(radius, flagImage, flagImage->GetLargestPossibleRegion());
-
- for (flagReverse = 0; flagReverse < 2; ++flagReverse)
- {
- nModIt.SetLocation(modIt.GetIndex());
- nDirIt.SetLocation(dirIt.GetIndex());
- nFlagIt.SetLocation(flagIt.GetIndex());
- // temporary point
- PointType point;
- VertexType vertex;
- modPtr->TransformIndexToPhysicalPoint(nModIt.GetIndex(), point);
- modPtr->TransformPhysicalPointToContinuousIndex(point, vertex);
- if (flagReverse == 0)
- {
- flagIt.Set(true);
-
- // otbMsgDebugMacro(<<"Adding new vertex: "<<vertex);
-
- pathTempDirect->AddVertex(vertex);
- }
- flagFinish = false;
- while (!flagFinish)
- {
- offsetVector = GetThreeNeighborOffsetFromDirection(nDirIt.GetCenterPixel(), flagReverse);
- OffsetIteratorType vecIt = offsetVector.begin();
- bool flagFound = false;
- while (vecIt != offsetVector.end() && !flagFound)
- {
- flagFound = nModIt.GetPixel(*vecIt) > 0
- && !nFlagIt.GetPixel(*vecIt);
- ++vecIt;
- }
- if (flagFound)
- {
- point.Fill(0);
- PointType tmpPoint;
- totalAmplitude = 0;
- for (vecIt = offsetVector.begin(); vecIt != offsetVector.end(); ++vecIt)
- {
- double currentAmplitude = nModIt.GetPixel(*vecIt);
- modPtr->TransformIndexToPhysicalPoint(nModIt.GetIndex(*vecIt), tmpPoint);
- point[0] += currentAmplitude * tmpPoint[0];
- point[1] += currentAmplitude * tmpPoint[1];
- totalAmplitude += currentAmplitude;
- }
- point[0] = point[0] / totalAmplitude;
- point[1] = point[1] / totalAmplitude;
- modPtr->TransformPhysicalPointToContinuousIndex(point, vertex);
- if (flagReverse == 0)
- {
-// otbMsgDevMacro(<<"Adding new vertex (direct): "<<vertex);
-
- pathTempDirect->AddVertex(vertex);
- }
- else
- {
-
-// otbMsgDevMacro(<<"Adding new vertex (reverse): "<<vertex);
-
- pathTempReverse->AddVertex(vertex);
- }
- // flag the pixel use
- nFlagIt.SetCenterPixel(true);
- //update the neighbor iterators so they are centered on the nearest pixel to the barycenter
- IndexType newIndex;
- if (modPtr->TransformPhysicalPointToIndex(point, newIndex))
- {
-// otbMsgDevMacro(<<"Moving to new center: " << newIndex);
- nModIt.SetLocation(newIndex);
- nDirIt.SetLocation(newIndex);
- nFlagIt.SetLocation(newIndex);
-
- if (nModIt.GetCenterPixel() == 0)
- {
- //we need to check that in case the barycenter is out...
- flagFinish = true;
- }
- if (nFlagIt.GetCenterPixel())
- {
- //we don't want to go back to the same pixels
- flagFinish = true;
- }
- }
- else
- {
- //new point outside image
- flagFinish = true;
- }
- }
- else
- {
- flagFinish = true;
- }
- }
- }
- VertexListPointerType vertexDirect = pathTempDirect->GetVertexList();
- VertexListPointerType vertexReverse = pathTempReverse->GetVertexList();
-
- unsigned int numberVertex = 0;
-
- VertexIteratorType vertexReverseIt = vertexReverse->End();
- if (vertexReverseIt != vertexReverse->Begin())
- {
- --vertexReverseIt;
- while (vertexReverseIt != vertexReverse->Begin())
- {
- path->AddVertex(vertexReverseIt.Value());
- ++numberVertex;
- --vertexReverseIt;
- }
- path->AddVertex(vertexReverseIt.Value());
- }
-
- VertexIteratorType vertexDirectIt = vertexDirect->Begin();
- while (vertexDirectIt != vertexDirect->End())
- {
- path->AddVertex(vertexDirectIt.Value());
- ++vertexDirectIt;
- ++numberVertex;
- }
-
- // otbMsgDebugMacro(<<"Path number of vertices: "<<numberVertex);
-
- if (numberVertex > 3)
- {
- outPtr->PushBack(path);
- }
- }
- }
-}
-
-/**
- * Compute the 8 neighbors to explore from the direction and the type of search (forward or backward).
- * \param direction The direction
- * \param flagReverse The type of search
- * \return The neighborhood
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-typename VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::OffsetVectorType
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::GetEightNeighborOffsetFromDirection(double direction, unsigned int flagReverse)
-{
- int neighborhoodNumber = 0;
- OffsetVectorType offset;
- offset.reserve(8);
- if (direction > 0)
- {
- //find the direction in terms of 0, 1, 2, 3
- neighborhoodNumber = (int) (direction / (CONST_PI_4) -1);
- }
- else
- {
- neighborhoodNumber = (int) ((direction + CONST_PI) / (CONST_PI_4) -1);
- neighborhoodNumber = (neighborhoodNumber + 4);
- //if the direction was <0 need to convert to 4, 5, 6, 7
- }
- if (flagReverse)
- {
- //if the reverse flag is activated we need to look on the other side
- neighborhoodNumber = (neighborhoodNumber + 4) % 8;
- }
- OffsetType tmpOffset;
- switch (neighborhoodNumber)
- {
- case 0:
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = 2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
-
- break;
-
- case 1:
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = 2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- break;
-
- case 2:
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = 0;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- break;
-
- case 3:
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = -2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- break;
-
- case 4:
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = -2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- break;
-
- case 5:
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = -2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- break;
-
- case 6:
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = 0;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- break;
-
- case 7:
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- tmpOffset[0] = 2;
- tmpOffset[1] = -2;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 2;
- tmpOffset[1] = 2;
- offset.push_back(tmpOffset);
- break;
- }
- return offset;
-}
-
-/**
- * Compute the 3 neighbors to explore from the direction and the type of search (forward or backward).
- * \param direction The direction
- * \param flagReverse The type of search
- * \return The neighborhood
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-typename VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::OffsetVectorType
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::GetThreeNeighborOffsetFromDirection(double direction, unsigned int flagReverse)
-{
- int neighborhoodNumber = 0;
- OffsetVectorType offset;
- offset.reserve(3);
- if (direction > 0)
- {
- //find the direction in terms of 0, 1, 2, 3
- neighborhoodNumber = (int) (direction / (CONST_PI_4) -1);
- }
- else
- {
- neighborhoodNumber = (int) ((direction + CONST_PI) / (CONST_PI_4) -1);
- neighborhoodNumber = (neighborhoodNumber + 4);
- //if the direction was <0 need to convert to 4, 5, 6, 7
- }
- if (flagReverse)
- {
- //if the reverse flag is activated we need to look on the other side
- neighborhoodNumber = (neighborhoodNumber + 4) % 8;
- }
- OffsetType tmpOffset;
-// otbMsgDevMacro(<<"Direction: " << neighborhoodNumber)
- switch (neighborhoodNumber)
- {
- case 0:
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- break;
-
- case 1:
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- break;
-
- case 2:
- tmpOffset[0] = 0;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
-
- break;
-
- case 3:
- tmpOffset[0] = -1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- break;
-
- case 4:
- tmpOffset[0] = -1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- break;
-
- case 5:
- tmpOffset[0] = -1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
-
- break;
-
- case 6:
- tmpOffset[0] = 0;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
-
- break;
-
- case 7:
- tmpOffset[0] = 1;
- tmpOffset[1] = -1;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 0;
- offset.push_back(tmpOffset);
- tmpOffset[0] = 1;
- tmpOffset[1] = 1;
- offset.push_back(tmpOffset);
-
- break;
- }
- return offset;
-}
-
-/**
- * PrintSelf Method
- */
-template <class TInputModulus, class TInputDirection, class TOutputPath>
-void
-VectorizationPathListFilter<TInputModulus, TInputDirection, TOutputPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // End namespace otb
-#endif
diff --git a/Modules/Filtering/Path/test/CMakeLists.txt b/Modules/Filtering/Path/test/CMakeLists.txt
index 699c24a3ca0a9e7761c463280b97dc4e468282da..79fe10a22d30c9ca5bd5d652c8e663fea243964d 100644
--- a/Modules/Filtering/Path/test/CMakeLists.txt
+++ b/Modules/Filtering/Path/test/CMakeLists.txt
@@ -36,7 +36,6 @@ otbDrawPathFilter.cxx
otbOrientationPath.cxx
otbPolyLineImageConstIterator.cxx
otbRegionImageToRectangularPathListFilter.cxx
-otbVectorizationPathListFilter.cxx
otbClosePathFunctor.cxx
otbPolyLineImageIterator.cxx
)
@@ -62,12 +61,12 @@ otb_add_test(NAME feTvImageToEdgePathFilterBis COMMAND otbPathTestDriver
otb_add_test(NAME feTvImageToEdgePathFilter COMMAND otbPathTestDriver
--compare-image ${EPSILON_8}
- ${BASELINE}/feImageToEdgePathFilter_rcc8_mire4.png
- ${TEMP}/feImageToEdgePathFilter_rcc8_mire4.png
+ ${BASELINE}/feImageToEdgePathFilterOutput.tif
+ ${TEMP}/feImageToEdgePathFilterOutput.tif
otbImageToEdgePathFilter
- ${INPUTDATA}/rcc8_mire4.png
- ${TEMP}/feImageToEdgePathFilter_rcc8_mire4.png
- 255
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
+ ${TEMP}/feImageToEdgePathFilterOutput.tif
+ 3
)
otb_add_test(NAME feTuCompacityPathCircle COMMAND otbPathTestDriver
@@ -165,31 +164,6 @@ otb_add_test(NAME feTvRegionImageToRectangularPathListFilter COMMAND otbPathTest
0.9 #fit score
10) #minimum size
-otb_add_test(NAME feTvVectorizationPathListFilterImageOutput COMMAND otbPathTestDriver
- --compare-image ${EPSILON_8}
- ${BASELINE}/feTvVectorizationPathListOutput.png
- ${TEMP}/feTvVectorizationPathListOutput.png
- otbVectorizationPathListFilter
- ${INPUTDATA}/InputForRoadDetection_NonMaxRem.raw.hdr
- ${INPUTDATA}/InputForRoadDetectionScalarProductDir.raw.hdr
- ${TEMP}/feTvVectorizationPathListOutputIgnored.txt
- ${TEMP}/feTvVectorizationPathListOutput.png
- 0.0001
- )
-
-otb_add_test(NAME feTvVectorizationPathListFilterAsciiOutput COMMAND otbPathTestDriver
- --compare-ascii ${EPSILON_3}
- ${BASELINE_FILES}/feTvVectorizationPathListOutput.txt
- ${TEMP}/feTvVectorizationPathListOutput.txt
- otbVectorizationPathListFilter
- ${INPUTDATA}/InputForRoadDetection_NonMaxRem.raw.hdr
- ${INPUTDATA}/InputForRoadDetectionScalarProductDir.raw.hdr
- ${TEMP}/feTvVectorizationPathListOutput.txt
- ${TEMP}/feTvVectorizationPathListOutputIgnored.png
- 0.0005
- )
-
-
otb_add_test(NAME bfTvClosePathFunctor COMMAND otbPathTestDriver
--compare-ascii ${NOTOL}
${BASELINE_FILES}/bfClosePathFunctorTest.txt
diff --git a/Modules/Filtering/Path/test/otbPathTestDriver.cxx b/Modules/Filtering/Path/test/otbPathTestDriver.cxx
index 5d1b508991581b0c74237020d6a8eb0d819f6c48..36352f2ca861edbda39448ed175d19b844c00ee3 100644
--- a/Modules/Filtering/Path/test/otbPathTestDriver.cxx
+++ b/Modules/Filtering/Path/test/otbPathTestDriver.cxx
@@ -36,7 +36,6 @@ void RegisterTests()
REGISTER_TEST(otbOrientationPath);
REGISTER_TEST(otbPolyLineImageConstIterator);
REGISTER_TEST(otbRegionImageToRectangularPathListFilter);
- REGISTER_TEST(otbVectorizationPathListFilter);
REGISTER_TEST(otbClosePathFunctor);
REGISTER_TEST(otbPolyLineImageIterator);
}
diff --git a/Modules/Filtering/Path/test/otbVectorizationPathListFilter.cxx b/Modules/Filtering/Path/test/otbVectorizationPathListFilter.cxx
deleted file mode 100644
index d4bf64c81c83e7628b6561ed906de841d124190a..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Path/test/otbVectorizationPathListFilter.cxx
+++ /dev/null
@@ -1,107 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbVectorizationPathListFilter.h"
-#include "itkPolyLineParametricPath.h"
-#include "otbImageFileReader.h"
-#include <fstream>
-
-#include "otbDrawPathListFilter.h"
-#include "otbImageFileWriter.h"
-
-int otbVectorizationPathListFilter(int itkNotUsed(argc), char * argv[])
-{
- const char * modfname = argv[1];
- const char * dirfname = argv[2];
- const char * outfname = argv[3];
- const char * outImagefname = argv[4];
- const double thresh = atof(argv[5]);
-
- const unsigned int Dimension = 2;
- typedef double PixelType;
- typedef unsigned char OutputPixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::Image<OutputPixelType, Dimension> OutputImageType;
- typedef otb::ImageFileWriter<OutputImageType> WriterType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef itk::PolyLineParametricPath<Dimension> PathType;
- typedef otb::DrawPathListFilter<OutputImageType, PathType, OutputImageType> DrawFilterType;
- typedef otb::VectorizationPathListFilter<ImageType, ImageType, PathType> VectorizationPathListFilterType;
- typedef VectorizationPathListFilterType::OutputPathListType PathListType;
- typedef PathListType::ConstIterator PathListIteratorType;
- typedef PathType::VertexListType VertexListType;
- typedef VertexListType::ConstIterator VertexIteratorType;
- // Instantiating objects
- VectorizationPathListFilterType::Pointer filter = VectorizationPathListFilterType::New();
- ReaderType::Pointer modReader = ReaderType::New();
- ReaderType::Pointer dirReader = ReaderType::New();
-
- modReader->SetFileName(modfname);
- dirReader->SetFileName(dirfname);
-
- filter->SetInput(modReader->GetOutput());
- filter->SetInputDirection(dirReader->GetOutput());
- filter->SetAmplitudeThreshold(thresh);
- filter->Update();
-
- PathListType::Pointer pathList = filter->GetOutput();
- PathListIteratorType pathListIt = pathList->Begin();
-
- std::ofstream file;
- file.open(outfname);
- unsigned int counter = 0;
-
- while (pathListIt != pathList->End())
- {
- file << "Path " << counter << ": ";
- for (VertexIteratorType vIt = pathListIt.Get()->GetVertexList()->Begin();
- vIt != pathListIt.Get()->GetVertexList()->End();
- ++vIt)
- {
- if (vIt != pathListIt.Get()->GetVertexList()->Begin())
- {
- file << ", ";
- }
- file << vIt.Value();
- }
- file << std::endl;
- ++pathListIt;
- ++counter;
- }
- file.close();
-
- OutputImageType::Pointer output = OutputImageType::New();
- output->SetRegions(modReader->GetOutput()->GetLargestPossibleRegion());
- output->Allocate();
- output->FillBuffer(255);
-
- DrawFilterType::Pointer drawer = DrawFilterType::New();
- drawer->SetInput(output);
- drawer->SetInputPath(filter->GetOutput());
- drawer->SetPathValue(0);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetFileName(outImagefname);
- writer->SetInput(drawer->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.h b/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.h
deleted file mode 100644
index 056a1003cbb58712343a0cc63fa3193483d6eb17..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.h
+++ /dev/null
@@ -1,116 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbOrthoRectificationFilter_h
-#define otbOrthoRectificationFilter_h
-
-#include <sstream>
-#include <stdio.h>
-
-#include "otbGenericRSResampleImageFilter.h"
-#include "otbCompositeTransform.h"
-#include "otbInverseSensorModel.h"
-
-#include "otbVectorImage.h"
-#include "otbImage.h"
-
-namespace otb
-{
-/** \class OrthoRectificationFilter
- *
- * \brief Class for Orthorectifying an image
- *
- * This class is used to apply map projection and sensor model transformation
- * to orthorectify an image, with or without DEM.
- *
- * \ingroup Projection
- *
- * \example Projections/OrthoRectificationExample.cxx
- *
- *
- * \ingroup OTBProjection
- */
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision = double>
-class ITK_EXPORT OrthoRectificationFilter :
- public GenericRSResampleImageFilter<TInputImage, TOutputImage>
-{
-public:
- /** Standard class typedefs */
- typedef GenericRSResampleImageFilter<TInputImage,
- TOutputImage> Superclass;
- typedef OrthoRectificationFilter Self;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** types definitions */
- typedef typename TInputImage::IndexType IndexType;
- typedef typename TInputImage::SizeType SizeType;
- typedef typename TInputImage::SpacingType SpacingType;
- typedef typename TInputImage::PointType PointType;
- typedef typename TInputImage::RegionType RegionType;
-
- typedef typename TOutputImage::PixelType OutputPixelType;
-
- /** output map projection */
- typedef TMapProjection MapProjectionType;
- typedef typename TMapProjection::Pointer MapProjectionPointerType;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(OrthoRectificationFilter, GenericRSResampleImageFilter);
-
- /** Accessors */
- virtual void SetMapProjection(MapProjectionType* arg)
- {
- if (this->m_MapProjection != arg)
- {
- this->m_MapProjection = arg;
- this->Modified();
- }
- }
- itkGetObjectMacro(MapProjection, MapProjectionType);
-
-protected:
- OrthoRectificationFilter();
- ~OrthoRectificationFilter() override;
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- void GenerateInputRequestedRegion() override;
- void GenerateOutputInformation(void) override;
-
-private:
- OrthoRectificationFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /** Map Projection used to transform cartographic coordinates in geographic coordinates */
- MapProjectionPointerType m_MapProjection;
-
-};
-
-} // namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbOrthoRectificationFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.hxx b/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.hxx
deleted file mode 100644
index c383f86a9cb2bfb58e39c9511eda1f4088cef048..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Projection/include/otbOrthoRectificationFilter.hxx
+++ /dev/null
@@ -1,79 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbOrthoRectificationFilter_hxx
-#define otbOrthoRectificationFilter_hxx
-
-#include "otbOrthoRectificationFilter.h"
-#include "itkMetaDataObject.h"
-
-namespace otb
-{
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision>
-OrthoRectificationFilter<TInputImage, TOutputImage, TMapProjection, TInterpolatorPrecision>
-::OrthoRectificationFilter(): m_MapProjection(nullptr)
-{}
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision>
-OrthoRectificationFilter<TInputImage, TOutputImage, TMapProjection, TInterpolatorPrecision>
-::~OrthoRectificationFilter()
-{}
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision>
-void OrthoRectificationFilter<TInputImage, TOutputImage, TMapProjection, TInterpolatorPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "OrthoRectification" << "\n";
-}
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision>
-void
-OrthoRectificationFilter<TInputImage, TOutputImage, TMapProjection, TInterpolatorPrecision>
-::GenerateInputRequestedRegion()
-{
- Superclass::GenerateInputRequestedRegion();
-}
-
-template <class TInputImage, class TOutputImage, class TMapProjection, class TInterpolatorPrecision>
-void
-OrthoRectificationFilter<TInputImage, TOutputImage, TMapProjection, TInterpolatorPrecision>
-::GenerateOutputInformation()
-{
- // call the superclass' implementation of this method
- Superclass::GenerateOutputInformation();
-
- if(!m_MapProjection.IsNull() && !m_MapProjection->GetWkt().empty())
- {
- // fill up the metadata information for ProjectionRef
- itk::MetaDataDictionary& dict = this->GetOutput()->GetMetaDataDictionary();
- std::string projectionRef = m_MapProjection->GetWkt();
- itk::EncapsulateMetaData<std::string>(dict, MetaDataKey::ProjectionRefKey, projectionRef);
-
- // Fill the GenericRSTransform with those information
- this->SetOutputProjectionRef(projectionRef);
- this->UpdateTransform();
- }
-}
-
-} //namespace otb
-
-#endif
diff --git a/Modules/Filtering/Projection/test/CMakeLists.txt b/Modules/Filtering/Projection/test/CMakeLists.txt
index adbca8d880be8c086e3e33a8d86c4424ebd1b0e9..b2e82e3676835ab5d7883aee53e014939ae41d3e 100644
--- a/Modules/Filtering/Projection/test/CMakeLists.txt
+++ b/Modules/Filtering/Projection/test/CMakeLists.txt
@@ -24,7 +24,6 @@ set(OTBProjectionTests
otbSensorModel.cxx
otbProjectionTestDriver.cxx
otbVectorDataProjectionFilterFromGeoToMap.cxx
-otbOrthoRectificationFilter.cxx
otbGenericRSResampleImageFilter.cxx
otbGeometriesProjectionFilter.cxx
otbGenericRSTransformGenericTest.cxx
@@ -44,7 +43,6 @@ otbVectorDataProjectionFilterFromMapToImage.cxx
otbGenericRSTransformFromImage.cxx
otbCompositeTransform.cxx
otbLeastSquareAffineTransformEstimator.cxx
-otbSpectralAngleDataNodeFeatureFunction.cxx
otbGCPsToRPCSensorModelImageFilterCheckRpcModel.cxx
otbGeographicalDistance.cxx
otbTileImageFilterRSTransformTest.cxx
@@ -325,8 +323,8 @@ foreach(current_img ${IMG_TEST_ORTHO})
otb_add_test(NAME prTvOrthoRectification_${current_imgtype}_${current_mode} COMMAND otbProjectionTestDriver
--compare-image ${EPSILON_4} ${BASELINE}/prTvOrthoRectification_${current_imgtype}_${current_mode}.tif
${TEMP}/prTvOrthoRectification_${current_imgtype}_${current_mode}.tif
- --tolerance-ratio ${current_tolerance_ratio}
- otbOrthoRectificationFilter
+ --tolerance-ratio ${current_tolerance_ratio}
+ otbGenericRSResampleImageFilter
LARGEINPUT{${current_img}?&geom=${INPUTDATA}/${current_geomgcp}.geom}
${TEMP}/prTvOrthoRectification_${current_imgtype}_${current_mode}.tif
${current_originx}
@@ -349,19 +347,6 @@ endforeach()
#----------------- OrthoRectification tests (end) -----------------------
#------------------------------------------------------------------------
-otb_add_test(NAME prTvotbGenericRSResampleImageFilter COMMAND otbProjectionTestDriver
- --compare-image ${EPSILON_4}
- ${BASELINE}/prTvotbGenericRSResampleImageFilterOutput.tif
- ${TEMP}/prTvotbGenericRSResampleImageFilterOutput.tif
- otbGenericRSResampleImageFilter
- LARGEINPUT{QUICKBIRD/TOULOUSE/000000128955_01_P001_PAN/02APR01105228-P1BS-000000128955_01_P001.TIF}
- 1000
- 15
- 0
- 1
- ${TEMP}/prTvotbGenericRSResampleImageFilterOutput.tif
- )
-
otb_add_test(NAME prTvGeometriesProjectionFilterLines COMMAND otbProjectionTestDriver
--compare-ogr ${EPSILON_9}
${BASELINE_FILES}/prTvVectorDataProjectionFilterLines.shp
@@ -596,29 +581,6 @@ otb_add_test(NAME prTvLeastSquareAffineTransformEstimator COMMAND otbProjectionT
352 807 919 10023 12102 14181
)
-otb_add_test(NAME bfTvSpectralAngleDataNodeFeatureFunction_Polygon COMMAND otbProjectionTestDriver
- --compare-ogr ${EPSILON_3}
- ${BASELINE_FILES}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Polygon.shp
- ${TEMP}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Polygon.shp
- otbSpectralAngleDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Polygon.shp
- 0 )
-
-otb_add_test(NAME bfTvSpectralAngleDataNodeFeatureFunction_Line COMMAND otbProjectionTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Line.shp
- ${TEMP}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Line.shp
- otbSpectralAngleDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvSpectralAngleDataNodeFeatureFunctionOutput_Line.shp
- 0
- )
-
set(VALID_CONDITION err=12)
if(OTB_OSSIM_VERSION LESS 20200)
set(VALID_CONDITION err=10)
@@ -1222,28 +1184,3 @@ set(GenericConversionChecking_INPUTS
#${INPUTDATA}/DEM/srtm_directory
#3 )
#endforeach()
-
-
-
- set(SENSOR_TYPES
- "QUICKBIRD/TOULOUSE/000000128955_01_P001_PAN/02APR01105228-P1BS-000000128955_01_P001.TIF"
- "GEOEYE/LES_ROCHES/po_350134_bgrn_0000000.tif"
- "WORLDVIEW2/ROME/WV-2_standard_8band_bundle_16bit/052298844010_01_P001_MUL/09DEC10103019-M2AS-052298844010_01_P001.TIF"
- )
-
- foreach( file ${SENSOR_TYPES})
- # Get the sensor name
- set(sharp_regexp "([0-9A-Za-z_]*)[ ]*/[ ]*(.*)")
- string(REGEX REPLACE "${sharp_regexp}" "\\1" sensor_name "${file}")
- # Tests
- otb_add_test(NAME prTvotbGenericRSResampleImageFilterFromMap_${sensor_name} COMMAND otbProjectionTestDriver
- --compare-image ${EPSILON_4}
- ${BASELINE}/prTvotbGenericRSResampleImageFilterOutputFromMap_${sensor_name}.tif
- ${TEMP}/prTvotbGenericRSResampleImageFilterOutputFromMap_${sensor_name}.tif
- otbGenericRSResampleImageFilterFromMap
- LARGEINPUT{${file}}
- 15
- 0
- ${TEMP}/prTvotbGenericRSResampleImageFilterOutputFromMap_${sensor_name}.tif
- )
- endforeach()
diff --git a/Modules/Filtering/Projection/test/otbGCPsToRPCSensorModelImageFilterAndOrtho.cxx b/Modules/Filtering/Projection/test/otbGCPsToRPCSensorModelImageFilterAndOrtho.cxx
index 20dc63f23e52b24bdfadf74aabb6159f61f6372b..f9eb115fcf556b9104b6b157d4fa0425e3ebd0a1 100644
--- a/Modules/Filtering/Projection/test/otbGCPsToRPCSensorModelImageFilterAndOrtho.cxx
+++ b/Modules/Filtering/Projection/test/otbGCPsToRPCSensorModelImageFilterAndOrtho.cxx
@@ -21,8 +21,7 @@
#include "otbImageFileReader.h"
#include "otbGCPsToRPCSensorModelImageFilter.h"
#include "otbImageFileWriter.h"
-#include "otbGenericMapProjection.h"
-#include "otbOrthoRectificationFilter.h"
+#include "otbGenericRSResampleImageFilter.h"
#include "otbMacro.h"
int otbGCPsToRPCSensorModelImageFilterAndOrtho(int argc, char* argv[])
@@ -47,8 +46,7 @@ int otbGCPsToRPCSensorModelImageFilterAndOrtho(int argc, char* argv[])
typedef GCPsToSensorModelFilterType::Point2DType Point2DType;
typedef GCPsToSensorModelFilterType::Point3DType Point3DType;
typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef otb::GenericMapProjection<otb::TransformDirection::INVERSE> MapProjectionType;
- typedef otb::OrthoRectificationFilter<ImageType, ImageType, MapProjectionType> OrthoRectifFilterType;
+ typedef otb::GenericRSResampleImageFilter<ImageType, ImageType> OrthoRectifFilterType;
ReaderType::Pointer reader = ReaderType::New();
reader->SetFileName(infname);
@@ -91,9 +89,6 @@ int otbGCPsToRPCSensorModelImageFilterAndOrtho(int argc, char* argv[])
OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
-
- MapProjectionType::Pointer utmMapProjection = MapProjectionType::New();
-
orthoRectifFilter->SetInput(rpcEstimator->GetOutput());
ImageType::IndexType start;
@@ -116,9 +111,9 @@ int otbGCPsToRPCSensorModelImageFilterAndOrtho(int argc, char* argv[])
origin[1] = strtod(argv[4], nullptr); //Origin northing
orthoRectifFilter->SetOutputOrigin(origin);
- utmMapProjection->SetWkt(otb::SpatialReference::FromUTM(atoi(argv[9]),argv[10][0]=='N'?otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt());
+ std::string wkt = otb::SpatialReference::FromUTM(atoi(argv[9]),argv[10][0]=='N'?otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt();
- orthoRectifFilter->SetMapProjection(utmMapProjection);
+ orthoRectifFilter->SetOutputProjectionRef(wkt);
ImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
no_data.Fill(0.0);
diff --git a/Modules/Filtering/Projection/test/otbGenericRSResampleImageFilter.cxx b/Modules/Filtering/Projection/test/otbGenericRSResampleImageFilter.cxx
index c61ad46200e62e100276c9cb1a3a661071918535..31027d1eae899c096547675667a3c57403498061 100644
--- a/Modules/Filtering/Projection/test/otbGenericRSResampleImageFilter.cxx
+++ b/Modules/Filtering/Projection/test/otbGenericRSResampleImageFilter.cxx
@@ -19,183 +19,124 @@
*/
-#include "otbGenericRSResampleImageFilter.h"
+
+// iostream is used for general output
+#include <iostream>
+#include <stdlib.h>
+#include <complex>
#include "otbImageFileReader.h"
#include "otbImageFileWriter.h"
+#include "otbGenericMapProjection.h"
+#include "itkUnaryFunctorImageFilter.h"
-#include <ogr_spatialref.h>
-
-// Extract ROI
-#include "otbMultiChannelExtractROI.h"
-
-// Images definition
-const unsigned int Dimension = 2;
-typedef double PixelType;
-typedef otb::VectorImage<PixelType, Dimension> ImageType;
-typedef ImageType::SizeType SizeType;
-
-typedef otb::GenericRSResampleImageFilter<ImageType,
- ImageType> ImageResamplerType;
-typedef ImageResamplerType::OriginType OriginType;
-typedef ImageResamplerType::SpacingType SpacingType;
-
-typedef otb::ImageFileReader<ImageType> ReaderType;
-typedef otb::ImageFileWriter<ImageType> WriterType;
-
+#include "otbDEMHandler.h"
+#include "otbUnaryImageFunctorWithVectorImageFilter.h"
+#include "otbGenericRSResampleImageFilter.h"
+#include "otbComplexToIntensityImageFilter.h"
+#include "otbPerBandVectorImageFilter.h"
-int otbGenericRSResampleImageFilter(int itkNotUsed(argc), char* argv[])
+int otbGenericRSResampleImageFilter(int argc, char* argv[])
{
+ if (argc != 15)
+ {
+ std::cout << argv[0] <<
+ " <input filename> <output filename> <origin easting> <origin northing>"
+ " <x size> <y size> <x spacing> <y spacing> <UTM zone> <UTM hemisphere>"
+ " <grid_spacing> <mode> <mode.info> <is_complex>"
+ << std::endl;
- // SmartPointer instantiation
- ImageResamplerType::Pointer resampler = ImageResamplerType::New();
-
- const char * infname = argv[1];
- const char * outfname = argv[6];
- unsigned int isize = atoi(argv[2]);
- double iGridSpacing = atof(argv[3]);
- int useInRpc = atoi(argv[4]);
- int useOutRpc = atoi(argv[5]);
-
-
- ReaderType::Pointer reader = ReaderType::New();
-
- // Read the input image
- reader->SetFileName(infname);
- reader->UpdateOutputInformation();
-
- // Fill the output size with the user selection
- SizeType size;
- size.Fill(isize);
-
- // Set the origin & the spacing of the output
- OriginType origin;
- origin[0] = 367340;
- origin[1] = 4.83467e+06;
-
- SpacingType spacing;
- spacing[0] = 0.6;
- spacing[1] = -0.6;
-
- // Build the output projection ref : UTM ref
- OGRSpatialReference oSRS;
- oSRS.SetProjCS("UTM");
- oSRS.SetUTM(31, true);
- char * utmRef = nullptr;
- oSRS.exportToWkt(&utmRef);
+ return EXIT_FAILURE;
+ }
- // Displacement Field spacing
- SpacingType gridSpacing;
- gridSpacing[0] = iGridSpacing;
- gridSpacing[1] = -iGridSpacing;
-
- // Default value builder
- ImageType::PixelType defaultValue;
- itk::NumericTraits<ImageType::PixelType>::SetLength(defaultValue, reader->GetOutput()->GetNumberOfComponentsPerPixel());
-
- // Set the Resampler Parameters
- resampler->SetInput(reader->GetOutput());
- resampler->SetDisplacementFieldSpacing(gridSpacing);
- resampler->SetOutputOrigin(origin);
- resampler->SetOutputSize(size);
- resampler->SetOutputSpacing(spacing);
- resampler->SetOutputProjectionRef(utmRef);
- resampler->SetEdgePaddingValue(defaultValue);
- if (useInRpc)
+ typedef std::complex<double> ComplexPixelType;
+ typedef otb::VectorImage<ComplexPixelType,2> ComplexVectorImageType;
+ typedef otb::VectorImage<double, 2> VectorImageType;
+ typedef otb::ImageFileReader<VectorImageType> ReaderType;
+ typedef otb::ImageFileReader<ComplexVectorImageType> ComplexReaderType;
+ typedef otb::ImageFileWriter<VectorImageType> WriterType;
+
+ // Handling of complex images
+ typedef otb::Image<ComplexPixelType> ComplexImageType;
+ typedef otb::Image<double> ImageType;
+ typedef otb::ComplexToIntensityImageFilter<ComplexImageType, ImageType> IntensityFilterType;
+ typedef otb::PerBandVectorImageFilter<ComplexVectorImageType,VectorImageType,IntensityFilterType> PerBandIntensityFilterType;
+ typedef otb::GenericRSResampleImageFilter<VectorImageType, VectorImageType> OrthoRectifFilterType;
+
+ //Allocate pointer
+ ReaderType::Pointer reader = ReaderType::New();
+ ComplexReaderType::Pointer cReader = ComplexReaderType::New();
+ WriterType::Pointer writer = WriterType::New();
+ PerBandIntensityFilterType::Pointer intensityFilter = PerBandIntensityFilterType::New();
+
+ OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
+
+ writer->SetFileName(argv[2]);
+
+ bool isComplex = atoi(argv[14]);
+
+ if(isComplex)
{
- resampler->SetInputRpcGridSize(20);
- resampler->EstimateInputRpcModelOn();
+ cReader->SetFileName(argv[1]);
+ cReader->GenerateOutputInformation();
+ intensityFilter->SetInput(cReader->GetOutput());
+ VectorImageType::PixelType no_data(cReader->GetOutput()->GetNumberOfComponentsPerPixel());
+ no_data.Fill(0);
+ orthoRectifFilter->SetEdgePaddingValue(no_data);
+ orthoRectifFilter->SetInput(intensityFilter->GetOutput());
}
-
- if (useOutRpc)
+ else
{
- resampler->SetOutputRpcGridSize(20);
- resampler->EstimateOutputRpcModelOn();
+ reader->SetFileName(argv[1]);
+ reader->GenerateOutputInformation();
+ VectorImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
+ no_data.Fill(0);
+ orthoRectifFilter->SetEdgePaddingValue(no_data);
+ orthoRectifFilter->SetInput(reader->GetOutput());
}
+ VectorImageType::IndexType start;
+ start[0] = 0;
+ start[1] = 0;
+ orthoRectifFilter->SetOutputStartIndex(start);
- // Write the resampled image
- WriterType::Pointer writer= WriterType::New();
- writer->SetNumberOfDivisionsTiledStreaming(4);
- writer->SetFileName(outfname);
- writer->SetInput(resampler->GetOutput());
- writer->Update();
+ VectorImageType::SizeType size;
+ size[0] = atoi(argv[5]); // X size
+ size[1] = atoi(argv[6]); //Y size
+ orthoRectifFilter->SetOutputSize(size);
- std::cout << resampler << std::endl;
+ VectorImageType::SpacingType spacing;
+ spacing[0] = atof(argv[7]);
+ spacing[1] = atof(argv[8]);
+ orthoRectifFilter->SetOutputSpacing(spacing);
- return EXIT_SUCCESS;
-}
-
-
-int otbGenericRSResampleImageFilterFromMap(int itkNotUsed(argc), char* argv[])
-{
- typedef otb::MultiChannelExtractROI<PixelType, PixelType> ExtractROIType;
-
- // SmartPointer instantiation
- ExtractROIType::Pointer extractor = ExtractROIType::New();
- ImageResamplerType::Pointer resampler = ImageResamplerType::New();
+ VectorImageType::PointType origin;
+ origin[0] = strtod(argv[3], nullptr); //Origin easting
+ origin[1] = strtod(argv[4], nullptr); //Origin northing
+ orthoRectifFilter->SetOutputOrigin(origin);
- const char * infname = argv[1];
- const char * outfname = argv[4];
- double iGridSpacing = atof(argv[2]);
- int useInRpc = atoi(argv[3]);
-
- // Reader Instantiation
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(infname);
- reader->UpdateOutputInformation();
-
- SpacingType spacing;
- spacing[0] = 2.5;
- spacing[1] = -2.5;
+ std::string wkt = otb::SpatialReference::FromUTM(atoi(argv[9]),atoi(argv[10]) ? otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt();
+ orthoRectifFilter->SetOutputProjectionRef(wkt);
// Displacement Field spacing
- SpacingType gridSpacing;
- gridSpacing[0] = iGridSpacing;
- gridSpacing[1] = -iGridSpacing;
-
- // Default value builder
- ImageType::PixelType defaultValue;
- itk::NumericTraits<ImageType::PixelType>::SetLength(defaultValue, reader->GetOutput()->GetNumberOfComponentsPerPixel());
-
- // Extract a roi centered on the input center
- ImageType::RegionType roi;
- ImageType::IndexType roiIndex;
- SizeType roiSize;
-
- // Fill the size
- roiSize.Fill(250);
-
- // Fill the start index
- roiIndex[0] = (unsigned int)((reader->GetOutput()->GetLargestPossibleRegion().GetSize()[0] - roiSize[0]) /2);
- roiIndex[1] = (unsigned int)((reader->GetOutput()->GetLargestPossibleRegion().GetSize()[1] - roiSize[1]) /2);
-
- roi.SetIndex(roiIndex);
- roi.SetSize(roiSize);
-
- extractor->SetExtractionRegion(roi);
- extractor->SetInput(reader->GetOutput());
- extractor->UpdateOutputInformation();
-
- // Set the Resampler Parameters
- resampler->SetInput(extractor->GetOutput());
- resampler->SetDisplacementFieldSpacing(gridSpacing);
- resampler->SetOutputParametersFromMap("UTM", spacing);
-
- if (useInRpc)
- {
- resampler->SetInputRpcGridSize(20);
- resampler->EstimateInputRpcModelOn();
- }
-
- // Write the resampled image
- WriterType::Pointer writer= WriterType::New();
- writer->SetAutomaticTiledStreaming();
- writer->SetFileName(outfname);
- writer->SetInput(resampler->GetOutput());
+ VectorImageType::SpacingType gridSpacing;
+ gridSpacing[0] = atof(argv[11]);
+ gridSpacing[1] = -atof(argv[11]);
+ orthoRectifFilter->SetDisplacementFieldSpacing(gridSpacing);
+
+ // manage demHandler
+ if (atoi(argv[12])==1) //mode = no DEM
+ {
+ otb::DEMHandler::Instance()->SetDefaultHeightAboveEllipsoid(135.8);
+ }
+ else if ( (atoi(argv[12])==2) || (atoi(argv[12])==3) ) //mode = DEM SRTM || DEM GTIFF
+ {
+ otb::DEMHandler::Instance()->OpenDEMDirectory(argv[13]);
+ }
+
+ writer->SetInput(orthoRectifFilter->GetOutput());
+ writer->SetNumberOfDivisionsTiledStreaming(4);
writer->Update();
- std::cout << resampler << std::endl;
-
return EXIT_SUCCESS;
}
diff --git a/Modules/Filtering/Projection/test/otbOrthoRectificationFilter.cxx b/Modules/Filtering/Projection/test/otbOrthoRectificationFilter.cxx
deleted file mode 100644
index e832b5dc0ff2163ec5abe0c0518544932f845552..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Projection/test/otbOrthoRectificationFilter.cxx
+++ /dev/null
@@ -1,144 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-// iostream is used for general output
-#include <iostream>
-#include <stdlib.h>
-#include <complex>
-
-#include "otbImageFileReader.h"
-#include "otbImageFileWriter.h"
-#include "otbGenericMapProjection.h"
-#include "itkUnaryFunctorImageFilter.h"
-//#include "itkComplexToModulusImageFilter.h"
-#include "otbDEMHandler.h"
-#include "otbUnaryImageFunctorWithVectorImageFilter.h"
-#include "otbOrthoRectificationFilter.h"
-#include "otbComplexToIntensityImageFilter.h"
-#include "otbPerBandVectorImageFilter.h"
-
-int otbOrthoRectificationFilter(int argc, char* argv[])
-{
- if (argc != 15)
- {
- std::cout << argv[0] <<
- " <input filename> <output filename> <origin easting> <origin northing>"
- " <x size> <y size> <x spacing> <y spacing> <UTM zone> <UTM hemisphere>"
- " <grid_spacing> <mode> <mode.info> <is_complex>"
- << std::endl;
-
- return EXIT_FAILURE;
- }
-
- typedef std::complex<double> ComplexPixelType;
- typedef otb::VectorImage<ComplexPixelType,2> ComplexVectorImageType;
- typedef otb::VectorImage<double, 2> VectorImageType;
- typedef otb::ImageFileReader<VectorImageType> ReaderType;
- typedef otb::ImageFileReader<ComplexVectorImageType> ComplexReaderType;
- typedef otb::ImageFileWriter<VectorImageType> WriterType;
-
- // Handling of complex images
- typedef otb::Image<ComplexPixelType> ComplexImageType;
- typedef otb::Image<double> ImageType;
- typedef otb::ComplexToIntensityImageFilter<ComplexImageType, ImageType> IntensityFilterType;
- typedef otb::PerBandVectorImageFilter<ComplexVectorImageType,VectorImageType,IntensityFilterType> PerBandIntensityFilterType;
- typedef otb::GenericMapProjection<otb::TransformDirection::INVERSE> MapProjectionType;
- typedef otb::OrthoRectificationFilter<VectorImageType, VectorImageType, MapProjectionType> OrthoRectifFilterType;
-
- //Allocate pointer
- ReaderType::Pointer reader = ReaderType::New();
- ComplexReaderType::Pointer cReader = ComplexReaderType::New();
- WriterType::Pointer writer = WriterType::New();
- PerBandIntensityFilterType::Pointer intensityFilter = PerBandIntensityFilterType::New();
-
- OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
-
- writer->SetFileName(argv[2]);
-
- bool isComplex = atoi(argv[14]);
-
- if(isComplex)
- {
- cReader->SetFileName(argv[1]);
- cReader->GenerateOutputInformation();
- intensityFilter->SetInput(cReader->GetOutput());
- VectorImageType::PixelType no_data(cReader->GetOutput()->GetNumberOfComponentsPerPixel());
- no_data.Fill(0);
- orthoRectifFilter->SetEdgePaddingValue(no_data);
- orthoRectifFilter->SetInput(intensityFilter->GetOutput());
- }
- else
- {
- reader->SetFileName(argv[1]);
- reader->GenerateOutputInformation();
- VectorImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
- no_data.Fill(0);
- orthoRectifFilter->SetEdgePaddingValue(no_data);
- orthoRectifFilter->SetInput(reader->GetOutput());
- }
-
- VectorImageType::IndexType start;
- start[0] = 0;
- start[1] = 0;
- orthoRectifFilter->SetOutputStartIndex(start);
-
- VectorImageType::SizeType size;
- size[0] = atoi(argv[5]); // X size
- size[1] = atoi(argv[6]); //Y size
- orthoRectifFilter->SetOutputSize(size);
-
- VectorImageType::SpacingType spacing;
- spacing[0] = atof(argv[7]);
- spacing[1] = atof(argv[8]);
- orthoRectifFilter->SetOutputSpacing(spacing);
-
- VectorImageType::PointType origin;
- origin[0] = strtod(argv[3], nullptr); //Origin easting
- origin[1] = strtod(argv[4], nullptr); //Origin northing
- orthoRectifFilter->SetOutputOrigin(origin);
-
- MapProjectionType::Pointer utmMapProjection = MapProjectionType::New();
- utmMapProjection->SetWkt(otb::SpatialReference::FromUTM(atoi(argv[9]),atoi(argv[10]) ? otb::SpatialReference::hemisphere::north : otb::SpatialReference::hemisphere::south).ToWkt());
- orthoRectifFilter->SetMapProjection(utmMapProjection);
-
- // Displacement Field spacing
- VectorImageType::SpacingType gridSpacing;
- gridSpacing[0] = atof(argv[11]);
- gridSpacing[1] = -atof(argv[11]);
- orthoRectifFilter->SetDisplacementFieldSpacing(gridSpacing);
-
- // manage demHandler
- if (atoi(argv[12])==1) //mode = no DEM
- {
- otb::DEMHandler::Instance()->SetDefaultHeightAboveEllipsoid(135.8);
- }
- else if ( (atoi(argv[12])==2) || (atoi(argv[12])==3) ) //mode = DEM SRTM || DEM GTIFF
- {
- otb::DEMHandler::Instance()->OpenDEMDirectory(argv[13]);
- }
-
- writer->SetInput(orthoRectifFilter->GetOutput());
- writer->SetNumberOfDivisionsTiledStreaming(4);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/Projection/test/otbProjectionTestDriver.cxx b/Modules/Filtering/Projection/test/otbProjectionTestDriver.cxx
index 6f985e5f5c797ef0a758fb4e70eb198d42b629ad..acbe2a16407fa3b09ef58adf069c95c836bc83ab 100644
--- a/Modules/Filtering/Projection/test/otbProjectionTestDriver.cxx
+++ b/Modules/Filtering/Projection/test/otbProjectionTestDriver.cxx
@@ -24,9 +24,7 @@ void RegisterTests()
{
REGISTER_TEST(otbSensorModel);
REGISTER_TEST(otbVectorDataProjectionFilterFromGeoToMap);
- REGISTER_TEST(otbOrthoRectificationFilter);
REGISTER_TEST(otbGenericRSResampleImageFilter);
- REGISTER_TEST(otbGenericRSResampleImageFilterFromMap);
REGISTER_TEST(otbGeometriesProjectionFilter);
REGISTER_TEST(otbGenericRSTransformGenericTest);
REGISTER_TEST(otbVectorDataTransformFilter);
@@ -46,7 +44,6 @@ void RegisterTests()
REGISTER_TEST(otbGenericRSTransformImageAndMNTToWGS84ConversionChecking);
REGISTER_TEST(otbCompositeTransform);
REGISTER_TEST(otbLeastSquareAffineTransformEstimator);
- REGISTER_TEST(otbSpectralAngleDataNodeFeatureFunction);
REGISTER_TEST(otbGCPsToRPCSensorModelImageFilterCheckRpcModel);
REGISTER_TEST(otbGeographicalDistance);
REGISTER_TEST(otbTileImageFilterRSTransformTest);
diff --git a/Modules/Filtering/Projection/test/otbSpectralAngleDataNodeFeatureFunction.cxx b/Modules/Filtering/Projection/test/otbSpectralAngleDataNodeFeatureFunction.cxx
deleted file mode 100644
index eb239242e2ad774a69c3480b8d447904c0945516..0000000000000000000000000000000000000000
--- a/Modules/Filtering/Projection/test/otbSpectralAngleDataNodeFeatureFunction.cxx
+++ /dev/null
@@ -1,127 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbSpectralAngleDataNodeFeatureFunction.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbVectorData.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataIntoImageProjectionFilter.h"
-#include "otbVectorDataFileWriter.h"
-#include "itkPreOrderTreeIterator.h"
-
-
-int otbSpectralAngleDataNodeFeatureFunction(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputImg = argv[2];
- const char * DEMDir = argv[3];
- const char * outputVD = argv[4];
- int DisplayWarnings = atoi(argv[5]);
-
- typedef double CoordRepType;
- typedef double PrecisionType;
- typedef otb::VectorImage<PrecisionType> ImageType;
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::VectorData<CoordRepType, 2, PrecisionType>
- VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataIntoImageProjectionFilter<VectorDataType, ImageType>
- VectorDataReProjFilter;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef otb::SpectralAngleDataNodeFeatureFunction<ImageType, CoordRepType, PrecisionType>
- FeaturefunctionType;
- typedef FeaturefunctionType::OutputType
- FeatureOutputType;
-
- ImageReaderType::Pointer imgReader = ImageReaderType::New();
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReProjFilter::Pointer vdReProjFilter = VectorDataReProjFilter::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- FeaturefunctionType::Pointer featureFunction = FeaturefunctionType::New();
-
- if (!DisplayWarnings)
- {
- imgReader->SetGlobalWarningDisplay(0);
- }
-
- otb::DEMHandler::Instance()->OpenDEMDirectory(DEMDir);
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- imgReader->SetFileName(inputImg);
- imgReader->UpdateOutputInformation();
- imgReader->Update(); //Needed to set m_EndIndex, m_StartIndex in otbDataNodeImageFunction
-
- vdReProjFilter->SetInputImage(imgReader->GetOutput());
- vdReProjFilter->SetInputVectorData(vdReader->GetOutput());
- vdReProjFilter->SetUseOutputSpacingAndOriginFromImage(true);
- vdReProjFilter->Update();
-
- std::cout<< "vdReProjFilter->GetOutput()->Size(): "
- << vdReProjFilter->GetOutput()->Size() << std::endl;
-
- featureFunction->SetInputImage(imgReader->GetOutput());
- featureFunction->SetRadius(0);
-
- // Output
- VectorDataType::Pointer outVD = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = outVD->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vdReProjFilter->GetOutput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsLineFeature() || itVector.Get()->IsPolygonFeature())
- {
- const DataNodeType::Pointer currentGeometry = itVector.Get();
- FeatureOutputType currentResult;
- currentResult = featureFunction->Evaluate(*(currentGeometry.GetPointer()));
- currentGeometry->SetFieldAsDouble("RADIOM", (double)(currentResult[0]));
- outVD->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- vdWriter->SetInput(outVD);
- vdWriter->SetFileName(outputVD);
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.h b/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.h
deleted file mode 100644
index 5a0d897384035224960895f0ce23a76dacc68d80..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.h
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDBOverlapDataNodeFeatureFunction_h
-#define otbDBOverlapDataNodeFeatureFunction_h
-
-#include "otbDataNodeVectorDataFunction.h"
-
-#include "itkPreOrderTreeIterator.h"
-
-namespace otb
-{
-/** \class DBOverlapDataNodeFeatureFunction
- * \brief
- *
- *
- * \ingroup Functions
- * \sa DataNodeVectorDataFunction
- *
- * \ingroup OTBVectorDataManipulation
- */
-
-template <
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT DBOverlapDataNodeFeatureFunction :
- public DataNodeVectorDataFunction<std::vector<TPrecision>, TCoordRep, TPrecision>
-{
-public:
- /** Standard class typedefs. */
- typedef DBOverlapDataNodeFeatureFunction Self;
- typedef DataNodeVectorDataFunction<std::vector<TPrecision>, TCoordRep, TPrecision>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(DBOverlapDataNodeFeatureFunction, DataNodeVectorDataFunction);
-
- /** Some typedefs. */
- typedef typename Superclass::DataNodeType DataNodeType;
- typedef typename DataNodeType::PointType PointType;
- typedef typename DataNodeType::LineType LineType;
- typedef typename LineType::VertexType VertexType;
- typedef typename DataNodeType::PolygonType PolygonType;
-
- typedef typename Superclass::VectorDataType VectorDataType;
- typedef typename VectorDataType::DataTreeType DataTreeType;
- typedef itk::PreOrderTreeIterator<typename VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef TCoordRep CoordRepType;
-
- typedef TPrecision PrecisionType;
-
- typedef std::vector<PrecisionType> OutputType;
-
- OutputType Evaluate( const DataNodeType& node ) const override;
-
- /** Set/Get methods */
- itkGetConstMacro(DistanceThreshold, PrecisionType);
- itkSetMacro(DistanceThreshold, PrecisionType);
-
- /** Method to compute the distance of a point to a segment */
- double ComputeEuclideanDistanceMetricToSegment(VertexType q1, VertexType q2, VertexType p) const;
-
-protected:
- DBOverlapDataNodeFeatureFunction();
- ~DBOverlapDataNodeFeatureFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- DBOverlapDataNodeFeatureFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
- /** Road / Building distance Threshold */
- PrecisionType m_DistanceThreshold;
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbDBOverlapDataNodeFeatureFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.hxx b/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.hxx
deleted file mode 100644
index 3ede4ecc7f096b033ae7ff40a85a0c14fc832c04..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbDBOverlapDataNodeFeatureFunction.hxx
+++ /dev/null
@@ -1,176 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbDBOverlapDataNodeFeatureFunction_hxx
-#define otbDBOverlapDataNodeFeatureFunction_hxx
-
-#include "otbDBOverlapDataNodeFeatureFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TCoordRep, class TPrecision>
-DBOverlapDataNodeFeatureFunction<TCoordRep, TPrecision>
-::DBOverlapDataNodeFeatureFunction()
- :m_DistanceThreshold(50)//in physical coordinates
-{
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TCoordRep, class TPrecision>
-void
-DBOverlapDataNodeFeatureFunction<TCoordRep, TPrecision>
-::PrintSelf(
- std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf( os, indent );
- os << indent << "Distance Threshold: " << m_DistanceThreshold << std::endl;
-}
-
-/**
- * Method to compute the distance of a point to a segment
- */
-template <class TCoordRep, class TPrecision>
-double
-DBOverlapDataNodeFeatureFunction<TCoordRep, TPrecision>
-::ComputeEuclideanDistanceMetricToSegment(VertexType q1, VertexType q2, VertexType p) const
-{
- // Length of the segment
- double l2 = q1.SquaredEuclideanDistanceTo(q2);
-
- // Is the projection of p on the segment inside (0<u<1) or
- // inside the segment bounds
- double u = ((p[0] - q1[0]) *(q2[0] - q1[0] ) +
- (p[1] - q1[1]) *(q2[1] - q1[1])) / l2;
-
- if( u < 1e-10 ) u = 0.;
- if( u -1. > 1e-10 ) u = 1.;
- double x = q1[0] + u *(q2[0] - q1[0] );
- double y = q1[1] + u *(q2[1] - q1[1] );
- double dx = x - p[0];
- double dy = y - p[1];
-
- return std::sqrt(dx*dx + dy*dy);
- }
-
-template <class TCoordRep, class TPrecision>
-typename DBOverlapDataNodeFeatureFunction<TCoordRep, TPrecision>
-::OutputType
-DBOverlapDataNodeFeatureFunction<TCoordRep, TPrecision>
-::Evaluate( const DataNodeType& node ) const
-{
- OutputType output;
-
- //build the tmp DataTree containing polygon within the radius
- typename VectorDataType::Pointer tmpDataTree = VectorDataType::New();
- typename DataNodeType::Pointer root = tmpDataTree->GetDataTree()->GetRoot()->Get();
- typename DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- tmpDataTree->GetDataTree()->Add(document, root);
-
- TreeIteratorType itVector(this->GetInputVectorData()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsPolygonFeature())
- {
- typename DataNodeType::Pointer currentGeometry = itVector.Get();
- unsigned int i=0;
- while (i<currentGeometry->GetPolygonExteriorRing()->GetVertexList()->Size())
- {
- unsigned int j=0;
- while (j<node.GetLine()->GetVertexList()->Size()-1)
- {
- double dist;
- dist = this->ComputeEuclideanDistanceMetricToSegment(node.GetLine()->GetVertexList()->GetElement(j),
- node.GetLine()->GetVertexList()->GetElement(j+1),
- currentGeometry->GetPolygonExteriorRing()->GetVertexList()->GetElement(i));
- //std::cout << "dist: " << dist << std::endl;
- //std::cout << "m_DistanceThreshold: " << m_DistanceThreshold << std::endl;
- if (dist <= m_DistanceThreshold)
- {
- //Add the current polygon to the tmp DataTree
- //jump to the next one
- tmpDataTree->GetDataTree()->Add(currentGeometry, document);
- j = node.GetLine()->GetVertexList()->Size();
- i = currentGeometry->GetPolygonExteriorRing()->GetVertexList()->Size();
- }
- ++j;
- }
- ++i;
- }
- }
- ++itVector;
- }
-
- /*
- std::cout << this->GetInputVectorData()->GetDataTree()->Count() << std::endl;
- std::cout << tmpDataTree->GetDataTree()->Count() << std::endl;
- */
- unsigned int crossAcc = 0;
- unsigned int nbBuildings = 0;
-
- TreeIteratorType it(tmpDataTree->GetDataTree());
- it.GoToBegin();
- while (!it.IsAtEnd())
- {
- if (it.Get()->IsPolygonFeature())
- {
- typename DataNodeType::Pointer currentGeometry = it.Get();
- nbBuildings ++;
- for (unsigned int i=0; i<node.GetLine()->GetVertexList()->Size()-1; ++i)
- {
-
- if(currentGeometry->GetPolygonExteriorRing()->NbCrossing(node.GetLine()->GetVertexList()->GetElement(i),
- node.GetLine()->GetVertexList()->GetElement(i+1)))
- {
- crossAcc ++;
- break;
- }
- }
- }
- ++it;
- }
-
- if(nbBuildings == 0)
- {
- output.push_back(static_cast<PrecisionType>(0.));
- }
- else
- {
- output.push_back(static_cast<PrecisionType>((double)(crossAcc)/(double)(nbBuildings)));
- }
-
- output.push_back(static_cast<PrecisionType>(crossAcc));
- output.push_back(static_cast<PrecisionType>(nbBuildings));
-
- return output;
-}
-
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.h b/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.h
deleted file mode 100644
index 303db1003b0aeae9e2b39c24a551d57bc2b3bb4c..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.h
+++ /dev/null
@@ -1,164 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_h
-#define otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_h
-
-#include "otbDataNodeImageFunction.h"
-
-#include "otbBinarySpectralAngleFunctor.h"
-#include "otbPolyLineImageConstIterator.h"
-#include "itkLineConstIterator.h"
-#include "itkVariableLengthVector.h"
-
-namespace otb
-{
-/** \class RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction
- * \brief Compute the spectral angle between the radiometry along
- * a line and its neighborhood
- *
- * This function compares the radiometry along a datanode with the
- * radiometry of the neighborhood.
- *
- * It computes the mean of a rectangular area around each line segment,
- * and the mean of two rectangular areas on each side of the line segment.
- * The descriptor is the spectral angle between the two values,
- * scaled by \$f\pi\$f.
- *
- * The width of the area around a line segment can be specified with
- * SetCenterRadius.
- *
- * The neighborhood area can be specified by two radius, using SetNeighborhoodBeginRadius
- * and SetNeighborhoodEndRadius.
- *
- *
- * \ingroup Functions
- * \sa DataNodeImageFunction
- * \sa NDVIDataNodeFeatureFunction
- *
- * \ingroup OTBVectorDataManipulation
- */
-
-template <
-class TImage,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction :
- public DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
-{
-public:
- /** Standard class typedefs. */
- typedef RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction Self;
- typedef DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction, DataNodeImageFunction);
-
- /** Some typedefs. */
- typedef typename Superclass::DataNodeType DataNodeType;
- typedef typename DataNodeType::LineType LineType;
- typedef typename LineType::Pointer LinePointer;
- typedef typename LineType::ContinuousIndexType ContinuousIndexType;
- typedef typename LineType::VertexListConstIteratorType VertexListConstIteratorType;
-
- typedef TImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::InternalPixelType ScalarRealType;
- typedef typename InputImageType::IndexType IndexType;
- typedef typename InputImageType::IndexValueType IndexValueType;
-
- typedef TCoordRep CoordRepType;
-
- typedef TPrecision PrecisionType;
-
- typedef itk::VariableLengthVector<PrecisionType> ReferencePixelType;
-
- typedef PolyLineImageConstIterator<InputImageType, LineType> ImageLineIteratorType;
- typedef itk::LineConstIterator<InputImageType> LineIteratorType;
-
- typedef Functor::BinarySpectralAngleFunctor<PixelType, ReferencePixelType, PrecisionType>
- SpectralAngleFunctorType;
-
- typedef std::pair<IndexType, IndexType> IndexPairType;
- typedef std::vector<PrecisionType> OutputType;
-
- /* Compute the descriptor value along this DataNode */
- OutputType Evaluate( const DataNodeType& node ) const override;
-
- /* Get the radius used to define the area around a line segment.
- * A radius of 0 means that the area is reduced to a line joining
- * the two segments extremities. */
- itkGetConstMacro(CenterRadius, unsigned int);
-
- /* Set the radius used to define the area around a line segment.
- * A radius of 0 means that the area is reduced to a line joining
- * the two segments extremities. */
- itkSetMacro(CenterRadius, unsigned int);
-
- /* Get the radius used to define the start of the neighboring area.
- * Typically this value must be greater than CenterRadius */
- itkGetConstMacro(NeighborhoodBeginRadius, unsigned int);
-
- /* Set the radius used to define the start of the neighboring area.
- * Typically this value must be greater than CenterRadius */
- itkSetMacro(NeighborhoodBeginRadius, unsigned int);
-
- /* Get the radius used to define the end of the neighboring area.
- * Typically this value must be greater than NeighborhoodBeginRadius */
- itkGetConstMacro(NeighborhoodEndRadius, unsigned int);
-
- /* Set the radius used to define the end of the neighboring area.
- * Typically this value must be greater than NeighborhoodBeginRadius */
- itkSetMacro(NeighborhoodEndRadius, unsigned int);
-
-protected:
- RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction();
- ~RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
- /** Center radius */
- unsigned int m_CenterRadius;
-
- /** Neighborhood start radius */
- unsigned int m_NeighborhoodBeginRadius;
-
- /** Neighborhood end radius */
- unsigned int m_NeighborhoodEndRadius;
-
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.hxx b/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.hxx
deleted file mode 100644
index eadf8f167ae171fba94d11b0f94a362cdea0435e..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.hxx
+++ /dev/null
@@ -1,228 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_hxx
-#define otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_hxx
-
-#include "otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template<class TImage, class TCoordRep, class TPrecision>
-RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction() :
- m_CenterRadius(1), m_NeighborhoodBeginRadius(2), m_NeighborhoodEndRadius(3)
-{
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template<class TImage, class TCoordRep, class TPrecision>
-void RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::PrintSelf(std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-template<class TImage, class TCoordRep, class TPrecision>
-typename RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::OutputType RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction<
- TImage, TCoordRep, TPrecision>::Evaluate(const DataNodeType& node) const
-{
-
- // TODO faire avce un ikk
- const typename ImageLineIteratorType::PathType* path;
-
- switch (node.GetNodeType())
- {
- case FEATURE_POINT:
- {
- itkExceptionMacro(<< "This DataNode type is not handled yet");
- break;
- }
- case FEATURE_LINE:
- {
- path = node.GetLine();
- break;
- }
- case FEATURE_POLYGON:
- {
- path = node.GetPolygonExteriorRing();
- break;
- }
- default:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- }
-
- std::vector<std::pair<IndexType, IndexType> > splitedLineIdNeigh;
- std::vector<std::pair<IndexType, IndexType> > splitedLineIdCentral;
-
- // Split line and polygon into segment (ie. line with two vertex
- VertexListConstIteratorType it1 = path->GetVertexList()->Begin();
- VertexListConstIteratorType it2 = path->GetVertexList()->Begin();
- VertexListConstIteratorType itStop = path->GetVertexList()->End();
-
- ++it2;
- if (it2 == itStop)
- {
- itkExceptionMacro(<< "Invalid DataNode, must at least contain two points");
- }
-
- while (it1 != itStop && it2 != itStop)
- {
- IndexType id1, id2;
- id1[0] = static_cast<int> (it1.Value()[0]);
- id1[1] = static_cast<int> (it1.Value()[1]);
- id2[0] = static_cast<int> (it2.Value()[0]);
- id2[1] = static_cast<int> (it2.Value()[1]);
-
- // Compute the direction of the current line
- itk::Vector<double, 2> direction;
- direction[0] = it2.Value()[0] - it1.Value()[0];
- direction[1] = it2.Value()[1] - it1.Value()[1];
- direction.Normalize();
-
- // Compute the orthogonal direction of the current line
- itk::Vector<double, 2> orthogonalDirection;
- orthogonalDirection[0] = direction[1];
- orthogonalDirection[1] = -direction[0];
-
- splitedLineIdCentral.push_back(IndexPairType(id1, id2));
- for (unsigned int j = 1; j <= m_CenterRadius; ++j)
- {
- IndexType shift11, shift12;
- shift11[0] = id1[0] - j * orthogonalDirection[0];
- shift11[1] = id1[1] - j * orthogonalDirection[1];
- shift12[0] = id1[0] + j * orthogonalDirection[0];
- shift12[1] = id1[1] + j * orthogonalDirection[1];
- IndexType shift21, shift22;
- shift21[0] = id2[0] - j * orthogonalDirection[0];
- shift21[1] = id2[1] - j * orthogonalDirection[1];
- shift22[0] = id2[0] + j * orthogonalDirection[0];
- shift22[1] = id2[1] + j * orthogonalDirection[1];
-
- splitedLineIdCentral.push_back(IndexPairType(shift11, shift21));
- splitedLineIdCentral.push_back(IndexPairType(shift12, shift22));
- }
-
- for (unsigned int j = m_NeighborhoodBeginRadius; j <= m_NeighborhoodEndRadius; ++j)
- {
- IndexType shift11, shift12;
- shift11[0] = id1[0] - j * orthogonalDirection[0];
- shift11[1] = id1[1] - j * orthogonalDirection[1];
- shift12[0] = id1[0] + j * orthogonalDirection[0];
- shift12[1] = id1[1] + j * orthogonalDirection[1];
- IndexType shift21, shift22;
- shift21[0] = id2[0] - j * orthogonalDirection[0];
- shift21[1] = id2[1] - j * orthogonalDirection[1];
- shift22[0] = id2[0] + j * orthogonalDirection[0];
- shift22[1] = id2[1] + j * orthogonalDirection[1];
-
- splitedLineIdNeigh.push_back(IndexPairType(shift11, shift21));
- splitedLineIdNeigh.push_back(IndexPairType(shift12, shift22));
- }
- ++it1;
- ++it2;
- }
-
- // in FEATURE_POLYGON case, first point appears twice (first vertex and last vertew, thus we create a line of 1 point...)
- if (node.GetNodeType() == FEATURE_POLYGON)
- {
- splitedLineIdCentral.pop_back();
- splitedLineIdNeigh.pop_back();
- splitedLineIdNeigh.pop_back();
- }
-
- double centralNbVisitedPixel = 0.;
-
- PixelType centralRadiomAcc(this->GetInputImage()->GetNumberOfComponentsPerPixel());
- centralRadiomAcc.Fill(0);
-
- for (unsigned int i = 0; i < splitedLineIdCentral.size(); ++i)
- {
- LineIteratorType lineIt(this->GetInputImage(), splitedLineIdCentral[i].first, splitedLineIdCentral[i].second);
- lineIt.GoToBegin();
-
- while (!lineIt.IsAtEnd())
- {
- if (this->IsInsideBuffer(lineIt.GetIndex()))
- {
- centralRadiomAcc += this->GetInputImage()->GetPixel( lineIt.GetIndex() );
- centralNbVisitedPixel += 1;
- }
- ++lineIt;
- }
- }
-
- double neighNbVisitedPixel = 0.;
-
- PixelType neighborRadiomAcc(this->GetInputImage()->GetNumberOfComponentsPerPixel());
- neighborRadiomAcc.Fill(0);
-
- for (unsigned int i = 0; i < splitedLineIdNeigh.size(); ++i)
- {
- LineIteratorType lineIt(this->GetInputImage(), splitedLineIdNeigh[i].first, splitedLineIdNeigh[i].second);
- lineIt.GoToBegin();
-
- while (!lineIt.IsAtEnd())
- {
- if (this->IsInsideBuffer(lineIt.GetIndex()))
- {
- neighborRadiomAcc += this->GetInputImage()->GetPixel( lineIt.GetIndex() );
- neighNbVisitedPixel += 1;
- }
- ++lineIt;
- }
- }
-
- OutputType output;
- if (centralNbVisitedPixel > 0 && neighNbVisitedPixel > 0)
- {
- // Compute averaged radiometry in both areas
- centralRadiomAcc /= centralNbVisitedPixel;
- neighborRadiomAcc /= neighNbVisitedPixel;
-
- // Compute the spectral angle between the center area and the neighbor area
- SpectralAngleFunctorType spectralAngleFunctor;
- double angle = spectralAngleFunctor(neighborRadiomAcc, centralRadiomAcc);
-
- // Make sure we are in [0, 1] interval
- angle /= otb::CONST_PI;
-
- output.push_back(static_cast<PrecisionType> (angle));
- }
- else
- {
- output.push_back(static_cast<PrecisionType> (0.));
- }
-
- // TODO: handle streaming, need to output the current state
- return output;
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.h b/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.h
deleted file mode 100644
index 1bc3dce3fea38484b86e8629213bf652ef138aeb..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.h
+++ /dev/null
@@ -1,135 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbSpectralAngleDataNodeFeatureFunction_h
-#define otbSpectralAngleDataNodeFeatureFunction_h
-
-#include "otbDataNodeImageFunction.h"
-
-#include "otbBinarySpectralAngleFunctor.h"
-#include "otbPolyLineImageConstIterator.h"
-#include "itkLineConstIterator.h"
-#include "itkVariableLengthVector.h"
-
-namespace otb
-{
-/** \class SpectralAngleDataNodeFeatureFunction
- * \brief Compute a spectral angle based feature alongside a
- * datanode.
- *
- * This function compute a spectral angle alongside a datanode.
- * The feature is the mean spectral angle regarding a
- * reference pixel alongside the tested datanode.
- *
- * The output has three elements:
- * - #0: mean spectral angle of a neighborhood around the datanode, weighted to fit in [0, 1] interval
- * - #1: accumulator of the spectral angle alongside the datanode
- * - #2: number of visited pixel
- *
- * \ingroup Functions
- * \sa DataNodeImageFunction
- * \sa NDVIDataNodeFeatureFunction
- *
- * \ingroup OTBVectorDataManipulation
- */
-
-template <
-class TImage,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT SpectralAngleDataNodeFeatureFunction :
- public DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
-{
-public:
- /** Standard class typedefs. */
- typedef SpectralAngleDataNodeFeatureFunction Self;
- typedef DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(SpectralAngleDataNodeFeatureFunction, DataNodeImageFunction);
-
- /** Some typedefs. */
- typedef typename Superclass::DataNodeType DataNodeType;
- typedef typename DataNodeType::LineType LineType;
- typedef typename LineType::Pointer LinePointer;
- typedef typename LineType::ContinuousIndexType ContinuousIndexType;
- typedef typename LineType::VertexListConstIteratorType VertexListConstIteratorType;
-
- typedef TImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::InternalPixelType ScalarRealType;
- typedef typename InputImageType::IndexType IndexType;
- typedef typename InputImageType::IndexValueType IndexValueType;
-
- typedef TCoordRep CoordRepType;
-
- typedef TPrecision PrecisionType;
-
- typedef itk::VariableLengthVector<PrecisionType> ReferencePixelType;
-
- typedef PolyLineImageConstIterator<InputImageType, LineType> ImageLineIteratorType;
- typedef itk::LineConstIterator<InputImageType> LineIteratorType;
-
- typedef Functor::BinarySpectralAngleFunctor<PixelType, ReferencePixelType, PrecisionType>
- SpectralAngleFunctorType;
-
- typedef std::pair<IndexType, IndexType> IndexPairType;
- typedef std::vector<PrecisionType> OutputType;
-
- OutputType Evaluate( const DataNodeType& node ) const override;
-
- /** Set/Get methods */
- itkGetConstMacro(RefPixel, PixelType);
- itkSetMacro(RefPixel, PixelType);
-
- itkGetConstMacro(Radius, unsigned int);
- itkSetMacro(Radius, unsigned int);
-
-protected:
- SpectralAngleDataNodeFeatureFunction();
- ~SpectralAngleDataNodeFeatureFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- SpectralAngleDataNodeFeatureFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
- /** SpectralAngle Functor & ReferencePixel*/
- ReferencePixelType m_RefPixel;
- SpectralAngleFunctorType m_SpectralAngleFunctor;
-
- /** Neighborhood radius */
- unsigned int m_Radius;
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbSpectralAngleDataNodeFeatureFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.hxx b/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.hxx
deleted file mode 100644
index c2ed9e81e295505f4fbaad58afeeaa772f77770e..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/include/otbSpectralAngleDataNodeFeatureFunction.hxx
+++ /dev/null
@@ -1,204 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbSpectralAngleDataNodeFeatureFunction_hxx
-#define otbSpectralAngleDataNodeFeatureFunction_hxx
-
-#include "otbSpectralAngleDataNodeFeatureFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template<class TImage, class TCoordRep, class TPrecision>
-SpectralAngleDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::SpectralAngleDataNodeFeatureFunction() :
- m_Radius(2)
-{
- //Example for QuickBird images (on a specific image)
- m_RefPixel.SetSize(4);
- m_RefPixel.SetElement(0, 252.284);
- m_RefPixel.SetElement(1, 357.3);
- m_RefPixel.SetElement(2, 232.644);
- m_RefPixel.SetElement(3, 261.558);
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template<class TImage, class TCoordRep, class TPrecision>
-void SpectralAngleDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::PrintSelf(std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Reference Pixel: " << m_RefPixel << std::endl;
-}
-
-template<class TImage, class TCoordRep, class TPrecision>
-typename SpectralAngleDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>::OutputType SpectralAngleDataNodeFeatureFunction<
- TImage, TCoordRep, TPrecision>::Evaluate(const DataNodeType& node) const
-{
-
- // TODO faire avce un ikk
- const typename ImageLineIteratorType::PathType* path;
-
- switch (node.GetNodeType())
- {
- case FEATURE_POINT:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- case FEATURE_LINE:
- {
- path = node.GetLine();
- break;
- }
- case FEATURE_POLYGON:
- {
- path = node.GetPolygonExteriorRing();
- break;
- }
- default:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- }
-
- std::vector<std::pair<IndexType, IndexType> > splitedLineIdNeigh;
- std::vector<std::pair<IndexType, IndexType> > splitedLineIdCentral;
-
- // Split line and polygon into segment (ie. line with two vertex
- VertexListConstIteratorType it1 = path->GetVertexList()->Begin();
- VertexListConstIteratorType it2 = path->GetVertexList()->Begin();
- VertexListConstIteratorType itStop = path->GetVertexList()->End();
-
- ++it2;
- if (it2 == itStop)
- {
- itkExceptionMacro(<< "Invalid DataNode, must at least contain two points");
- }
-
- while (it1 != itStop && it2 != itStop)
- {
- IndexType id1, id2;
- id1[0] = static_cast<int> (it1.Value()[0]);
- id1[1] = static_cast<int> (it1.Value()[1]);
- id2[0] = static_cast<int> (it2.Value()[0]);
- id2[1] = static_cast<int> (it2.Value()[1]);
-
- // Compute the direction of the current line
- itk::Vector<double, 2> direction;
- direction[0] = it2.Value()[0] - it1.Value()[0];
- direction[1] = it2.Value()[1] - it1.Value()[1];
- direction.Normalize();
-
- // Compute the orthogonal direction of the current line
- itk::Vector<double, 2> orthogonalDirection;
- orthogonalDirection[0] = direction[1];
- orthogonalDirection[1] = -direction[0];
-
- splitedLineIdCentral.push_back(IndexPairType(id1, id2));
-
- for (unsigned int j = 1; j <= m_Radius; ++j)
- {
- IndexType shift11, shift12;
- shift11[0] = id1[0] - j * orthogonalDirection[0];
- shift11[1] = id1[1] - j * orthogonalDirection[1];
- shift12[0] = id1[0] + j * orthogonalDirection[0];
- shift12[1] = id1[1] + j * orthogonalDirection[1];
- IndexType shift21, shift22;
- shift21[0] = id2[0] - j * orthogonalDirection[0];
- shift21[1] = id2[1] - j * orthogonalDirection[1];
- shift22[0] = id2[0] + j * orthogonalDirection[0];
- shift22[1] = id2[1] + j * orthogonalDirection[1];
-
- splitedLineIdCentral.push_back(IndexPairType(shift11, shift21));
- splitedLineIdCentral.push_back(IndexPairType(shift12, shift22));
- }
-
- ++it1;
- ++it2;
- }
-
- // in FEATURE_POLYGON case, first point appears twice (first vertex and last vertew, thus we create a line of 1 point...)
- if (node.GetNodeType() == FEATURE_POLYGON)
- {
- splitedLineIdCentral.pop_back();
- }
-
- double centralAccSpectralAngle = 0.;
- //double centralAccSpectralAngleSecondOrder = 0.;
- double centralNbVisitedPixel = 0.;
-
- for (unsigned int i = 0; i < splitedLineIdCentral.size(); ++i)
- {
- LineIteratorType lineIt(this->GetInputImage(), splitedLineIdCentral[i].first, splitedLineIdCentral[i].second);
- lineIt.GoToBegin();
-
- while (!lineIt.IsAtEnd())
- {
- if (this->IsInsideBuffer(lineIt.GetIndex()))
- {
- PixelType currPixel = this->GetInputImage()->GetPixel( lineIt.GetIndex() );
- double angle = m_SpectralAngleFunctor(currPixel, this->GetRefPixel());
- centralAccSpectralAngle += angle;
- //centralAccSpectralAngleSecondOrder += angle * angle;
- centralNbVisitedPixel += 1;
- }
- ++lineIt;
- }
- }
-
- OutputType output;
-
- double meanCentral = 0.;
- //double stddevCentral = 0.;
- if (centralNbVisitedPixel != 0.)
- {
- meanCentral = static_cast<double> (centralAccSpectralAngle) / centralNbVisitedPixel;
- //stddevCentral = std::sqrt( centralAccSpectralAngleSecondOrder/centralNbVisitedPixel - meanCentral*meanCentral );
- }
-
- if (meanCentral == 0.)
- {
- output.push_back(static_cast<PrecisionType> (0.));
- }
- else
- {
- // Compute the descriptor here
- // meanCentral is in [0, pi]
- // We need a descriptor in [0 1]
-
- double descriptor = meanCentral / otb::CONST_PI;
- output.push_back(static_cast<PrecisionType>( descriptor ));
- }
-
- output.push_back(static_cast<PrecisionType> (centralAccSpectralAngle));
- output.push_back(static_cast<PrecisionType> (centralNbVisitedPixel));
-
- return output;
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Filtering/VectorDataManipulation/test/CMakeLists.txt b/Modules/Filtering/VectorDataManipulation/test/CMakeLists.txt
index 8513e931ac8918b27fe82f9d51d17cacbeb759a9..a4f17c2c5abfea6b32e5f7bc1bdd3270b66e4334 100644
--- a/Modules/Filtering/VectorDataManipulation/test/CMakeLists.txt
+++ b/Modules/Filtering/VectorDataManipulation/test/CMakeLists.txt
@@ -22,12 +22,10 @@ otb_module_test()
set(OTBVectorDataManipulationTests
otbVectorDataManipulationTestDriver.cxx
-otbDBOverlapDataNodeFeatureFunction.cxx
otbVectorDataExtractROI.cxx
otbPolygonCompacityFunctor.cxx
otbVectorDataToRandomLineGenerator.cxx
otbConcatenateVectorDataFilter.cxx
-otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.cxx
)
add_executable(otbVectorDataManipulationTestDriver ${OTBVectorDataManipulationTests})
@@ -36,18 +34,6 @@ otb_module_target_label(otbVectorDataManipulationTestDriver)
# Tests Declaration
-otb_add_test(NAME bfTvDBOverlapDataNodeFeatureFunction COMMAND otbVectorDataManipulationTestDriver
- --compare-ogr ${NOTOL}
- ${BASELINE_FILES}/bfTvDBOverlapDataNodeFeatureFunctionOutput.shp
- ${TEMP}/bfTvDBOverlapDataNodeFeatureFunctionOutput.shp
- otbDBOverlapDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${TEMP}/bfTvDBOverlapDataNodeFeatureFunctionOutput.shp
- 0
- )
-
-
otb_add_test(NAME coTvVectorDataExtractROI COMMAND otbVectorDataManipulationTestDriver
--compare-ogr ${NOTOL}
${BASELINE_FILES}/coVectorDataExtractROIOutput.shp
@@ -84,12 +70,10 @@ otb_add_test(NAME bfTvVectorDataToRandomLineGenerator COMMAND otbVectorDataManip
${BASELINE_FILES}/bfTvVectorDataToRandomLineGeneratorOutput.shp
${TEMP}/bfTvVectorDataToRandomLineGeneratorOutput.shp
otbVectorDataToRandomLineGenerator
- ${INPUTDATA}/ObjectReco/Boats/maur_B010202_01Polygons.shp
+ ${INPUTDATA}/Capitole-Shadows.shp
${TEMP}/bfTvVectorDataToRandomLineGeneratorOutput.shp
)
-
-
otb_add_test(NAME bfTvConcatenateVectorDataFilter COMMAND otbVectorDataManipulationTestDriver
--compare-ogr ${NOTOL}
${BASELINE_FILES}/otbConcatenateVectorDataFilter_Output.shp
@@ -99,24 +83,3 @@ otb_add_test(NAME bfTvConcatenateVectorDataFilter COMMAND otbVectorDataManipulat
${INPUTDATA}/waterways.shp
${TEMP}/otbConcatenateVectorDataFilter_Output.shp
)
-
-otb_add_test(NAME bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_Polygon COMMAND otbVectorDataManipulationTestDriver
- --compare-ogr ${EPSILON_3}
- ${BASELINE_FILES}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Polygon.shp
- ${TEMP}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Polygon.shp
- otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Polygon.shp
- 0 )
-otb_add_test(NAME bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction_Line COMMAND otbVectorDataManipulationTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Line.shp
- ${TEMP}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Line.shp
- otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunctionOutput_Line.shp
- 0 )
diff --git a/Modules/Filtering/VectorDataManipulation/test/otbDBOverlapDataNodeFeatureFunction.cxx b/Modules/Filtering/VectorDataManipulation/test/otbDBOverlapDataNodeFeatureFunction.cxx
deleted file mode 100644
index 7bc471de7647fdd08f38f284fcabda330f9a50bb..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/test/otbDBOverlapDataNodeFeatureFunction.cxx
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbDBOverlapDataNodeFeatureFunction.h"
-
-#include "otbVectorData.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataFileWriter.h"
-
-
-int otbDBOverlapDataNodeFeatureFunction(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputDB = argv[2];
- const char * outputVD = argv[3];
- int DisplayWarnings = atoi(argv[4]);
-
- typedef double CoordRepType;
- typedef double PrecisionType;
- typedef otb::VectorData<CoordRepType, 2, PrecisionType>
- VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef otb::DBOverlapDataNodeFeatureFunction<CoordRepType, PrecisionType>
- DataNodeFunctionType;
- typedef DataNodeFunctionType::OutputType
- FeatureOutputType;
-
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReaderType::Pointer vdDBReader = VectorDataReaderType::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- DataNodeFunctionType::Pointer function = DataNodeFunctionType::New();
-
- if (!DisplayWarnings)
- {
- vdReader->SetGlobalWarningDisplay(0);
- }
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- vdDBReader->SetFileName(inputDB);
- vdDBReader->Update();
-
- function->SetInputVectorData(vdDBReader->GetOutput());
- function->SetDistanceThreshold(0.003);
-
- // Output
- VectorDataType::Pointer outVD = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = outVD->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vdReader->GetOutput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsLineFeature() || itVector.Get()->IsPolygonFeature())
- {
- const DataNodeType::Pointer currentGeometry = itVector.Get();
- FeatureOutputType currentResult;
- currentResult = function->Evaluate(*(currentGeometry.GetPointer()));
- currentGeometry->SetFieldAsDouble("DBOVER", (double)(currentResult[0]));
- outVD->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- vdWriter->SetInput(outVD);
- vdWriter->SetFileName(outputVD);
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/VectorDataManipulation/test/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.cxx b/Modules/Filtering/VectorDataManipulation/test/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.cxx
deleted file mode 100644
index a5481e05d3f0b64f74f0b2e2153722fa960ff722..0000000000000000000000000000000000000000
--- a/Modules/Filtering/VectorDataManipulation/test/otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.cxx
+++ /dev/null
@@ -1,124 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbVectorData.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataIntoImageProjectionFilter.h"
-#include "otbVectorDataFileWriter.h"
-#include "itkPreOrderTreeIterator.h"
-
-
-int otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputImg = argv[2];
- const char * DEMDir = argv[3];
- const char * outputVD = argv[4];
- int DisplayWarnings = atoi(argv[5]);
-
- typedef double CoordRepType;
- typedef double PrecisionType;
- typedef otb::VectorImage<PrecisionType> ImageType;
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::VectorData<CoordRepType, 2, PrecisionType>
- VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataIntoImageProjectionFilter<VectorDataType, ImageType>
- VectorDataReProjFilter;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef otb::RadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction<ImageType, CoordRepType, PrecisionType>
- FeaturefunctionType;
- typedef FeaturefunctionType::OutputType
- FeatureOutputType;
-
- ImageReaderType::Pointer imgReader = ImageReaderType::New();
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReProjFilter::Pointer vdReProjFilter = VectorDataReProjFilter::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- FeaturefunctionType::Pointer featureFunction = FeaturefunctionType::New();
-
- if (!DisplayWarnings)
- {
- imgReader->SetGlobalWarningDisplay(0);
- }
-
- otb::DEMHandler::Instance()->OpenDEMDirectory(DEMDir);
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- imgReader->SetFileName(inputImg);
- imgReader->UpdateOutputInformation();
- imgReader->Update(); //Needed to set m_EndIndex, m_StartIndex in otbDataNodeImageFunction
-
- vdReProjFilter->SetInputImage(imgReader->GetOutput());
- vdReProjFilter->SetInputVectorData(vdReader->GetOutput());
- vdReProjFilter->SetUseOutputSpacingAndOriginFromImage(true);
- vdReProjFilter->Update();
-
- std::cout<< "vdReProjFilter->GetOutput()->Size(): "
- << vdReProjFilter->GetOutput()->Size() << std::endl;
-
- featureFunction->SetInputImage(imgReader->GetOutput());
-
- // Output
- VectorDataType::Pointer outVD = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = outVD->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vdReProjFilter->GetOutput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsLineFeature() || itVector.Get()->IsPolygonFeature())
- {
- const DataNodeType::Pointer currentGeometry = itVector.Get();
- FeatureOutputType currentResult;
- currentResult = featureFunction->Evaluate(*(currentGeometry.GetPointer()));
- currentGeometry->SetFieldAsDouble("RADIOM_HOM", (double)(currentResult[0]));
- outVD->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- vdWriter->SetInput(outVD);
- vdWriter->SetFileName(outputVD);
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Filtering/VectorDataManipulation/test/otbVectorDataManipulationTestDriver.cxx b/Modules/Filtering/VectorDataManipulation/test/otbVectorDataManipulationTestDriver.cxx
index c4230b11556a036ec89fa39103beba40d12a5252..d09a9aaed3041af20589dc65f6f1a6903c3e4437 100644
--- a/Modules/Filtering/VectorDataManipulation/test/otbVectorDataManipulationTestDriver.cxx
+++ b/Modules/Filtering/VectorDataManipulation/test/otbVectorDataManipulationTestDriver.cxx
@@ -22,10 +22,8 @@
void RegisterTests()
{
- REGISTER_TEST(otbDBOverlapDataNodeFeatureFunction);
REGISTER_TEST(otbVectorDataExtractROI);
REGISTER_TEST(otbPolygonCompacityFunctor);
REGISTER_TEST(otbVectorDataToRandomLineGenerator);
REGISTER_TEST(otbConcatenateVectorDataFilter);
- REGISTER_TEST(otbRadiometryHomogenousWithNeighborhoodDataNodeFeatureFunction);
}
diff --git a/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.h b/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.h
deleted file mode 100644
index 224f16af2c1b9b5f91200dd65209a03e4b231501..0000000000000000000000000000000000000000
--- a/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.h
+++ /dev/null
@@ -1,184 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbStandardDSCostFunction_h
-#define otbStandardDSCostFunction_h
-
-#include "itkSingleValuedCostFunction.h"
-
-#include "otbVectorDataToDSValidatedVectorDataFilter.h"
-#include <string>
-
-namespace otb
-{
-/** \class StandardDSCostFunction
- * \brief Standard Cost Function used to estimate the fuzzy model parameters
- * in the Dempster-Shafer framework
- *
- * This class has been developed to estimate, with the help of the Amoeba
- * optimizer, the fuzzy model parameters to be used in the class
- * otb::VectorDataToDSValidatedVectorDataFilter. The cost value compute the
- * cost according to:
- * - an enriched ground truth vector data (using VectorDataToRoadDescription)
- * - an enriched negative sample VectorData or at least random samples
- * - an hypothesis (the same as the considered DSValidationFilter)
- * (by default (NONDVI, ROADSA, NOBUIL))
- * - a weight between 0 and 1 (0.5 by default) corresponding to the situation
- * policy regarding under detection/false detection (1 no under detection
- * 0 no false detection)
- * For now the cost function use the NONDVI Feature, ROADSA Feature and and
- * the NOBUIL Feature.
- * For each evolution of the VectorDataToDSValidatedVectorDataFilter,
- * this cost function must be adapted.
- *
- * \ingroup CostFunction
- * \sa VectorDataToDSValidatedVectorDataFilter
- * \sa AmoebaOptimizer
- *
- * \ingroup OTBDempsterShafer
- */
-
-template <class TDSValidationFilter>
-class ITK_EXPORT StandardDSCostFunction :
-public itk::SingleValuedCostFunction
-{
-public:
- /** Standard class typedefs. */
- typedef StandardDSCostFunction Self;
- typedef itk::SingleValuedCostFunction Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(StandardDSCostFunction, itk::SingleValuedCostFunction);
-
- typedef Superclass::MeasureType MeasureType; //double
- typedef Superclass::DerivativeType DerivativeType; //Array<double>
- typedef Superclass::ParametersType ParametersType; //Array<double>
-
- typedef TDSValidationFilter DSValidationFilterType;
- typedef typename DSValidationFilterType::VectorDataType
- VectorDataType;
- typedef typename DSValidationFilterType::TreeIteratorType
- TreeIteratorType;
- typedef typename DSValidationFilterType::LabelSetType
- LabelSetType;
-
- typedef FuzzyDescriptorsModelManager FuzzyDescriptorsModelManagerType;
-
- typedef FuzzyDescriptorsModelManager::DescriptorListType
- DescriptorListType;
- typedef FuzzyDescriptorsModelManager::DescriptorsModelType
- DescriptorsModelType;
- typedef FuzzyDescriptorsModelManager::PairType PairType;
-
- typedef Parser ParserType;
-
- /** This method returns the value of the cost function corresponding
- * to the specified parameters. */
- MeasureType GetValue( const ParametersType & parameters ) const override;
-
- /** This method returns the derivative of the cost function corresponding
- * to the specified parameters. */
- void GetDerivative( const ParametersType & parameters,
- DerivativeType & derivative ) const override;
-
- unsigned int GetNumberOfParameters(void) const override;
-
- itkSetMacro(Weight, double);
- itkGetConstMacro(Weight, double);
-
- itkSetMacro(CriterionFormula, std::string);
- itkGetConstMacro(CriterionFormula, std::string);
-
- void SetDescriptorList(DescriptorListType list)
- {
- m_DescriptorList = list;
- }
-
- DescriptorListType GetDescriptorList()
- {
- return m_DescriptorList;
- }
-
- itkSetObjectMacro(GTVectorData, VectorDataType);
- itkGetConstObjectMacro(GTVectorData, VectorDataType);
-
- itkSetObjectMacro(NSVectorData, VectorDataType);
- itkGetConstObjectMacro(NSVectorData, VectorDataType);
-
-
- LabelSetType GetBeliefHypothesis()
- {
- return m_BeliefHypothesis;
- }
-
- void SetBeliefHypothesis(LabelSetType hypothesis)
- {
- m_BeliefHypothesis = hypothesis;
- }
-
- LabelSetType GetPlausibilityHypothesis()
- {
- return m_PlausibilityHypothesis;
- }
-
- void SetPlausibilityHypothesis(LabelSetType hypothesis)
- {
- m_PlausibilityHypothesis = hypothesis;
- }
-
-protected:
- /** Constructor */
- StandardDSCostFunction();
- /** Destructor */
- ~StandardDSCostFunction() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- StandardDSCostFunction(const Self &) = delete;
- void operator =(const Self&) = delete;
-
-
- typename VectorDataType::Pointer m_GTVectorData; //Ground Truth
- typename VectorDataType::Pointer m_NSVectorData; //Negative Samples
-
- typename ParserType::Pointer m_Parser;
- std::string m_CriterionFormula;
-
- double m_Weight; //range ]0; 1[
-
- LabelSetType m_BeliefHypothesis;
- LabelSetType m_PlausibilityHypothesis;
-
- DescriptorListType m_DescriptorList;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbStandardDSCostFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.hxx b/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.hxx
deleted file mode 100644
index 236c1e5e9ae83b087987a43347be174f80a4d5ac..0000000000000000000000000000000000000000
--- a/Modules/Learning/DempsterShafer/include/otbStandardDSCostFunction.hxx
+++ /dev/null
@@ -1,172 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbStandardDSCostFunction_hxx
-#define otbStandardDSCostFunction_hxx
-
-#include "otbStandardDSCostFunction.h"
-
-namespace otb
-{
-// Constructor
-template <class TDSValidationFilter>
-StandardDSCostFunction<TDSValidationFilter>
-::StandardDSCostFunction() :
- m_CriterionFormula("((Belief + Plausibility)/2.)"),
- m_Weight(0.5)
-{
- m_GTVectorData = VectorDataType::New();
- m_NSVectorData = VectorDataType::New();
- m_Parser = ParserType::New();
-}
-
-template <class TDSValidationFilter>
-unsigned int
-StandardDSCostFunction<TDSValidationFilter>
-::GetNumberOfParameters() const
- {
- return m_DescriptorList.size()*4;
- }
-
-template <class TDSValidationFilter>
-typename StandardDSCostFunction<TDSValidationFilter>
-::MeasureType
- StandardDSCostFunction<TDSValidationFilter>
-::GetValue(const ParametersType & parameters) const
- {
- if (parameters.size() != m_DescriptorList.size()*4)
- {
- itkExceptionMacro(<< "Wrong model!" )
- }
-
- //Initialize parser
- m_Parser->SetExpr(m_CriterionFormula);
-
- DescriptorsModelType descModel;
- for (unsigned int i = 0; i < m_DescriptorList.size(); ++i)
- {
- std::vector<double> tmp;
- for (unsigned int j = 0; j < 4; ++j)
- {
- tmp.push_back(parameters[4*i+j]);
- }
- PairType pair( m_DescriptorList[i], tmp);
- descModel.push_back(pair);
- }
-
- typename DSValidationFilterType::Pointer internalFunctionGT = DSValidationFilterType::New();
- internalFunctionGT->SetCriterionFormula("1");
- internalFunctionGT->SetInput(m_GTVectorData);
- internalFunctionGT->SetBeliefHypothesis(m_BeliefHypothesis);
- internalFunctionGT->SetPlausibilityHypothesis(m_PlausibilityHypothesis);
- try
- {
- internalFunctionGT->SetDescriptorModels(descModel);
- }
- catch ( itk::ExceptionObject & )
- {
- return 1;
- }
- internalFunctionGT->Update();
-
- typename DSValidationFilterType::Pointer internalFunctionNS = DSValidationFilterType::New();
- internalFunctionNS->SetCriterionFormula("1");
- internalFunctionNS->SetInput(m_NSVectorData);
- internalFunctionNS->SetBeliefHypothesis(m_BeliefHypothesis);
- internalFunctionNS->SetBeliefHypothesis(m_PlausibilityHypothesis);
- try
- {
- internalFunctionNS->SetDescriptorModels(descModel);
- }
- catch (itk::ExceptionObject &)
- {
- return 1;
- }
- internalFunctionNS->Update();
-
- double accGT = 0.0;
- double accNS = 0.0;
- double nGT = 0.0;
- double nNS = 0.0;
-
- TreeIteratorType itVectorGT(internalFunctionGT->GetOutput()->GetDataTree());
- itVectorGT.GoToBegin();
- while (!itVectorGT.IsAtEnd())
- {
- if (!itVectorGT.Get()->IsRoot() && !itVectorGT.Get()->IsDocument() && !itVectorGT.Get()->IsFolder())
- {
- double belief = itVectorGT.Get()->GetFieldAsDouble("Belief");
- double plausibility = itVectorGT.Get()->GetFieldAsDouble("Plausi");
-
- m_Parser->DefineVar("Belief", &belief);
- m_Parser->DefineVar("Plausibility", &plausibility);
-
- accGT += ((1 - m_Parser->Eval()) * (1 - m_Parser->Eval()));
- nGT += 1.0;
-
- m_Parser->ClearVar();
- }
- itVectorGT++;
- }
-
- TreeIteratorType itVectorNS(internalFunctionNS->GetOutput()->GetDataTree());
- itVectorNS.GoToBegin();
- while (!itVectorNS.IsAtEnd())
- {
- if (!itVectorNS.Get()->IsRoot() && !itVectorNS.Get()->IsDocument() && !itVectorNS.Get()->IsFolder())
- {
- double belief = itVectorNS.Get()->GetFieldAsDouble("Belief");
- double plausibility = itVectorNS.Get()->GetFieldAsDouble("Plausi");
-
- m_Parser->DefineVar("Belief", &belief);
- m_Parser->DefineVar("Plausibility", &plausibility);
-
- accNS += (m_Parser->Eval() * m_Parser->Eval());
- nNS += 1.0;
-
- m_Parser->ClearVar();
- }
- itVectorNS++;
- }
- return (m_Weight * accGT / nGT + (1 - m_Weight) * accNS / nNS);
-}
-
-template <class TDSValidationFilter>
-void
-StandardDSCostFunction<TDSValidationFilter>
-::GetDerivative(const ParametersType & itkNotUsed(parameters), DerivativeType & itkNotUsed(derivative)) const
- {
- //Not necessary for Amoeba Optimizer
- itkExceptionMacro(<< "Not Supposed to be used when using Amoeba Optimizer!")
- }
-
-// PrintSelf Method
-template <class TDSValidationFilter>
-void
-StandardDSCostFunction<TDSValidationFilter>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-
-}// end namespace otb
-
-#endif
diff --git a/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.h b/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.h
deleted file mode 100644
index 43a3b9a6f953f658e9217d9a39f6d23a1482acc2..0000000000000000000000000000000000000000
--- a/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.h
+++ /dev/null
@@ -1,204 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorDataToDSValidatedVectorDataFilter_h
-#define otbVectorDataToDSValidatedVectorDataFilter_h
-
-#include "otbMassOfBelief.h"
-
-#include "otbVectorDataToVectorDataFilter.h"
-
-#include "itkPreOrderTreeIterator.h"
-#include "otbVectorData.h"
-#include "otbFuzzyDescriptorsModelManager.h"
-
-#include "otbFuzzyVariable.h"
-#include "otbJointMassOfBeliefFilter.h"
-#include "otbParser.h"
-#include <string>
-
-namespace otb
-{
-/** \class VectorDataToDSValidatedVectorDataFilter
- * \brief VectorData filter validating data nodes using
- * Dempster-Shafer theory.
- *
- * This filter takes as input a vector data containing
- * features score and validate (or not) each data node
- * according to these features score, a fuzzy model corresponding
- * to each feature and a criterion according to the Dempster-Shafer
- * theory. By default the filter is (for now) parametrized to process
- * VectorDatas providing by the VectorDataToRoadDescriptionFilter.
- * The hypothesis must be set using the SetHypothesis method.
- * The convention is for each feature Fe, a mass of Belief is defined
- * with two variables named Fe and Fe_. Thus, an hypothesis must declared:
- * VectorDataToVectorDataFilter::LabelSetType hyp;
- * hyp.insert("Fe(i)");
- * hyp.insert("Fe(j)_");
- * hyp.insert("Fe(k)_");
- *
- * Fe(i), Fe(j) and Fe(k) being descriptors.
- *
- * The criterion can be set through SetCriterionFormula() as a
- * string referring to "Belief" and "Plausibility" from the
- * Dempster-Shafer theory. By default the criterion is:
- * "((Belief + Plausibility)/2) >= 0.5"
- *
- * The considered features will be the intersection between
- * the features embedded in this filter and the features embedded
- * in the input vector data. For now, the filter uses "NONDVI" and
- * "ROADSA" features.
- *
- *
- * \ingroup VectorDataFilter
- * \sa VectorDataToRoadDescriptionFilter
- * \sa VectorDataToBuildingDescriptionFilter
- *
- * \ingroup OTBDempsterShafer
- */
-
-template <class TVectorData, class TPrecision=float>
-class ITK_EXPORT VectorDataToDSValidatedVectorDataFilter :
-public otb::VectorDataToVectorDataFilter<TVectorData, TVectorData>
-{
-public:
- /** Standard class typedefs. */
- typedef VectorDataToDSValidatedVectorDataFilter Self;
- typedef VectorDataToVectorDataFilter<TVectorData,
- TVectorData> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(VectorDataToDSValidatedVectorDataFilter, VectorDataToVectorDataFilter);
-
- /** Some typedefs. */
- typedef TVectorData VectorDataType;
- typedef typename VectorDataType::Pointer VectorDataPointer;
- typedef typename VectorDataType::DataNodeType DataNodeType;
- typedef itk::PreOrderTreeIterator<typename VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef TPrecision PrecisionType;
- typedef MassOfBelief<std::string, PrecisionType>
- MassOfBeliefFunctionType;
- typedef typename MassOfBeliefFunctionType::LabelSetType
- LabelSetType;
- typedef JointMassOfBeliefFilter<MassOfBeliefFunctionType>
- JointMassOfBeliefFilterType;
- typedef Parser ParserType;
-
- typedef itk::DataObject::Pointer DataObjectPointer;
- typedef itk::DataObject DataObject;
-
-
- typedef FuzzyVariable<std::string, PrecisionType> FuzzyVarType;
-
- typedef FuzzyDescriptorsModelManager::PairType PairType;
- typedef FuzzyDescriptorsModelManager::DescriptorsModelType DescriptorModelsType;
-
- /** Descriptor model accessors. */
- virtual void AddDescriptor(const std::string& key, std::vector<double> model);
- virtual void ClearDescriptors();
-
- void SetDescriptorModels( DescriptorModelsType model );
- DescriptorModelsType GetDescriptorModels()
- {
- return m_DescriptorModels;
- }
-
- /** Parameter accessors. */
- itkGetConstMacro(CriterionFormula, std::string);
- itkSetMacro(CriterionFormula, std::string);
-
- itkGetMacro(CriterionThreshold, double);
- itkSetMacro(CriterionThreshold, double);
-
- LabelSetType GetBeliefHypothesis()
- {
- return m_BeliefHypothesis;
- }
-
- void SetBeliefHypothesis(LabelSetType hypothesis)
- {
- m_BeliefHypothesis = hypothesis;
- }
-
- LabelSetType GetPlausibilityHypothesis()
- {
- return m_PlausibilityHypothesis;
- }
-
- void SetPlausibilityHypothesis(LabelSetType hypothesis)
- {
- m_PlausibilityHypothesis = hypothesis;
- }
-
- unsigned int GetNumberOfParameters()
- {
- return (m_DescriptorModels.size() * 4);
- }
-
-
-protected:
- /** Triggers the Computation */
- void GenerateData(void) override;
- /** Constructor */
- VectorDataToDSValidatedVectorDataFilter();
- /** Destructor */
- ~VectorDataToDSValidatedVectorDataFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
- std::string GetNextID()
- {
- std::ostringstream oss;
- oss << m_CurrentID++;
- return oss.str();
- }
-
-private:
- VectorDataToDSValidatedVectorDataFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- // Descriptor bench
- DescriptorModelsType m_DescriptorModels;
- std::vector< typename FuzzyVarType::Pointer > m_FuzzyVars;
- LabelSetType m_Universe,
- m_BeliefHypothesis,
- m_PlausibilityHypothesis;
- double m_Bel, m_Plau;
- typename ParserType::Pointer m_Parser;
-
- std::string m_CriterionFormula;
- double m_CriterionThreshold;
- unsigned int m_CurrentID;
-};
-
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbVectorDataToDSValidatedVectorDataFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.hxx b/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.hxx
deleted file mode 100644
index 8e07927bb6fd9106cce86ea182c59e9da92d690c..0000000000000000000000000000000000000000
--- a/Modules/Learning/DempsterShafer/include/otbVectorDataToDSValidatedVectorDataFilter.hxx
+++ /dev/null
@@ -1,228 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbVectorDataToDSValidatedVectorDataFilter_hxx
-#define otbVectorDataToDSValidatedVectorDataFilter_hxx
-
-#include "otbVectorDataToDSValidatedVectorDataFilter.h"
-#include <iostream>
-
-namespace otb
-{
-
-// Constructor
-template <class TVectorData, class TPrecision>
- VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::VectorDataToDSValidatedVectorDataFilter() :
- m_Bel(0.0),
- m_Plau(0.0),
- m_CriterionFormula("((Belief + Plausibility)/2.)"),
- m_CriterionThreshold(0.5),
- m_CurrentID(0)
-{
- this->SetNumberOfRequiredInputs(1);
-
- m_Parser = ParserType::New();
-}
-
-
-template <class TVectorData, class TPrecision>
-void
-VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::AddDescriptor(const std::string& key, std::vector<double> model)
-{
- bool alreadyExist = false;
-
- if (model.size() != 4)
- {
- itkExceptionMacro(<< "Wrong model! Size(=" << model.size() << ") > 4" )
- }
- else if (model[0]<0 || model[1]<model[0] || model[2]<model[1] || model[2]>1)
- {
- itkExceptionMacro(<< "Wrong model! Values have to be 0<=v1<=v2<=v3<=1" )
- }
- else if (model[3]<.75 || model[3]>1.0)
- {
- itkExceptionMacro(<< "Wrong model! Values have to be 0.75<=v4<=1" )
- }
- else
- {
- for (unsigned int i=0; i<m_DescriptorModels.size(); ++i)
- {
- if (m_DescriptorModels[i].first.compare(key) == 0)
- {
- for (unsigned int j=0; j<4; ++j)
- {
- m_DescriptorModels[i].second.at(j) = model[j];
- }
- alreadyExist = true;
- }
- }
- if (!alreadyExist)
- {
- m_DescriptorModels.push_back(std::pair<std::string, std::vector<double> >(key, model));
- }
- }
-
- this->Modified();
-}
-
-
-template <class TVectorData, class TPrecision>
-void
-VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::ClearDescriptors()
-{
- m_DescriptorModels.clear();
-}
-
-template <class TVectorData, class TPrecision>
-void
-VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::SetDescriptorModels(DescriptorModelsType model)
-{
- for (unsigned int i=0; i<model.size(); ++i)
- {
- this->AddDescriptor(model[i].first, model[i].second);
- }
-}
-
-
-template <class TVectorData, class TPrecision>
-void
-VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::GenerateData()
-{
- //Initialize Dempster Shafer tools
- if( m_DescriptorModels.size() == 0 )
- {
- itkExceptionMacro(<< "No defined Descriptor. Please add a descriptor model.");
- }
-
- for (unsigned int i=0; i<m_DescriptorModels.size(); ++i)
- {
- typename FuzzyVarType::Pointer fuz = FuzzyVarType::New();
- std::string fuzName, fuzName_;
- fuzName = m_DescriptorModels[i].first;
- fuzName_ = m_DescriptorModels[i].first + "_";
-
- fuz->SetMembership(fuzName,
- 0.0,
- 0.0,
- m_DescriptorModels[i].second[0],
- m_DescriptorModels[i].second[1],
- 0.0,
- m_DescriptorModels[i].second[3]);
- fuz->SetMembership(fuzName_,
- m_DescriptorModels[i].second[1],
- m_DescriptorModels[i].second[2],
- 1.0,
- 1.0,
- 0.0,
- m_DescriptorModels[i].second[3]);
-
- m_FuzzyVars.push_back(fuz);
-
- m_Universe.insert(fuzName);
- m_Universe.insert(fuzName_);
- }
-
- //Initialize parser
- m_Parser->SetExpr(m_CriterionFormula);
- m_Parser->DefineVar("Belief", &m_Bel);
- m_Parser->DefineVar("Plausibility", &m_Plau);
-
- // Output
- this->GetOutput(0)->SetMetaDataDictionary(this->GetInput()->GetMetaDataDictionary());
- // Retrieving root node
- typename DataNodeType::Pointer root = this->GetOutput(0)->GetDataTree()->GetRoot()->Get();
- // Create the document node
- typename DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- this->GetOutput(0)->GetDataTree()->Add(document, root);
- // Create the folder node
- typename DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- this->GetOutput(0)->GetDataTree()->Add(folder, document);
- this->GetOutput(0)->SetProjectionRef(this->GetInput()->GetProjectionRef());
-
- TreeIteratorType itVector(this->GetInput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (!itVector.Get()->IsRoot() && !itVector.Get()->IsDocument() && !itVector.Get()->IsFolder())
- {
- typename DataNodeType::Pointer currentGeometry = itVector.Get();
- typename JointMassOfBeliefFilterType::Pointer jointMassFilter = JointMassOfBeliefFilterType::New();
-
- for (unsigned int i=0; i<m_DescriptorModels.size(); ++i)
- {
- if (currentGeometry->HasField(m_DescriptorModels[i].first))
- {
- LabelSetType H, H_;
- std::string fuzName, fuzName_;
- fuzName = m_DescriptorModels[i].first;
- fuzName_ = m_DescriptorModels[i].first + "_";
-
- typename MassOfBeliefFunctionType::Pointer mass = MassOfBeliefFunctionType::New();
- mass->InitializePowerSetMasses(m_Universe);
-
- H.insert(fuzName);
- H_.insert(fuzName_);
-
- mass->SetMass(H, m_FuzzyVars[i]->GetMembership(fuzName, currentGeometry->GetFieldAsDouble(fuzName)));
- mass->SetMass(H_, m_FuzzyVars[i]->GetMembership(fuzName_, currentGeometry->GetFieldAsDouble(fuzName)));
-
- mass->EstimateUncertainty();
-
- jointMassFilter->PushBackInput(mass);
- }
- }
- jointMassFilter->Update();
- m_Bel = jointMassFilter->GetOutput()->GetBelief(m_BeliefHypothesis);
- m_Plau = jointMassFilter->GetOutput()->GetPlausibility(m_PlausibilityHypothesis);
-
- if (m_Parser->Eval() >= m_CriterionThreshold)
- {
- currentGeometry->SetNodeId(this->GetNextID());
- currentGeometry->SetFieldAsDouble("Belief", m_Bel);
- currentGeometry->SetFieldAsDouble("Plausi", m_Plau);
- this->GetOutput(0)->GetDataTree()->Add(currentGeometry, folder);
- }
- }
- ++itVector;
- }
-}
-
-
-// PrintSelf Method
-template <class TVectorData, class TPrecision>
-void
-VectorDataToDSValidatedVectorDataFilter<TVectorData, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Learning/DempsterShafer/test/CMakeLists.txt b/Modules/Learning/DempsterShafer/test/CMakeLists.txt
index d999a90fa0638dc4c981451209009bb73d925a46..9ebe35857fe75dfddf2560633365b8cfe8145a65 100644
--- a/Modules/Learning/DempsterShafer/test/CMakeLists.txt
+++ b/Modules/Learning/DempsterShafer/test/CMakeLists.txt
@@ -24,7 +24,6 @@ set(OTBDempsterShaferTests
otbDempsterShaferTestDriver.cxx
otbMassOfBeliefDSApplied.cxx
otbConfusionMatrixToMassOfBeliefTest.cxx
-otbVectorDataToDSValidatedVectorDataFilter.cxx
otbDempsterShaferFusionTests.cxx
otbDSFusionOfClassifiersImageFilterTest.cxx
otbJointMassOfBeliefFilter.cxx
@@ -85,16 +84,6 @@ otb_add_test(NAME fzTvConfusionMatrixToMassOfBeliefTestRecall COMMAND otbDempste
otbConfusionMatrixToMassOfBeliefTest
RECALL)
-otb_add_test(NAME fzTvVectorDataToDSValidatedVectorDataFilter COMMAND otbDempsterShaferTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/fzTvDSValidatedRoadVectorDataOutput.shp
- ${TEMP}/fzTvDSValidatedRoadVectorDataOutput.shp
- otbVectorDataToDSValidatedVectorDataFilter
- ${TEMP}/fzTvVectorDataToRoadDescriptionFilterOutput.shp
- ${TEMP}/fzTvDSValidatedRoadVectorDataOutput.shp
- )
-set_property(TEST fzTvVectorDataToDSValidatedVectorDataFilter PROPERTY DEPENDS fzTvVectorDataToRoadDescriptionFilter)
-
otb_add_test(NAME fzDSFusionTestConfMatFileVCMTestPrecision COMMAND otbDempsterShaferTestDriver
otbDempsterShaferFusionConfMatFileTest
${INPUTDATA}/Classification/QB_1_ortho_C1_V.csv
diff --git a/Modules/Learning/DempsterShafer/test/otbDempsterShaferTestDriver.cxx b/Modules/Learning/DempsterShafer/test/otbDempsterShaferTestDriver.cxx
index c38750c9cbd2443e8282a74b0005689c78455836..d8b30b333994660ead3a090f59519756a05a8330 100644
--- a/Modules/Learning/DempsterShafer/test/otbDempsterShaferTestDriver.cxx
+++ b/Modules/Learning/DempsterShafer/test/otbDempsterShaferTestDriver.cxx
@@ -24,7 +24,6 @@ void RegisterTests()
{
REGISTER_TEST(otbMassOfBeliefDSApplied);
REGISTER_TEST(otbConfusionMatrixToMassOfBeliefTest);
- REGISTER_TEST(otbVectorDataToDSValidatedVectorDataFilter);
REGISTER_TEST(otbDempsterShaferFusionOptRecConfMatTest);
REGISTER_TEST(otbDempsterShaferFusionOptRecTest);
REGISTER_TEST(otbDempsterShaferFusionOptTest);
diff --git a/Modules/Learning/DempsterShafer/test/otbVectorDataToDSValidatedVectorDataFilter.cxx b/Modules/Learning/DempsterShafer/test/otbVectorDataToDSValidatedVectorDataFilter.cxx
deleted file mode 100644
index d237ea5d2f5de3a453a862dac05964355ea6d0c8..0000000000000000000000000000000000000000
--- a/Modules/Learning/DempsterShafer/test/otbVectorDataToDSValidatedVectorDataFilter.cxx
+++ /dev/null
@@ -1,93 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbVectorDataToDSValidatedVectorDataFilter.h"
-
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataFileWriter.h"
-
-
-int otbVectorDataToDSValidatedVectorDataFilter(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * outputVD = argv[2];
-
- typedef float PrecisionType;
- typedef otb::VectorData<PrecisionType> VectorDataType;
- typedef otb::VectorDataFileReader<VectorDataType>
- VectorDataReaderType;
- typedef otb::VectorDataFileWriter<VectorDataType>
- VectorDataWriterType;
-
- typedef otb::VectorDataToDSValidatedVectorDataFilter<VectorDataType, PrecisionType>
- VectorDataValidationFilterType;
- typedef VectorDataValidationFilterType::LabelSetType
- LabelSetType;
- typedef otb::FuzzyDescriptorsModelManager
- FuzzyManagerType;
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
-
- VectorDataValidationFilterType::Pointer filter =
- VectorDataValidationFilterType::New();
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- filter->SetInput(vdReader->GetOutput());
- //filter->GetDescriptorModels();
- FuzzyManagerType::Print(filter->GetDescriptorModels());
- LabelSetType plau, bel;
- plau.insert("NONDVI");
- plau.insert("ROADSA");
- plau.insert("NOBUIL");
- filter->SetPlausibilityHypothesis(plau);
- bel.insert("ROADSA");
- bel.insert("NONDVI");
- bel.insert("NOBUIL");
- filter->SetBeliefHypothesis(bel);
-
- std::vector<double> stdModel;
- stdModel.push_back(0.25);
- stdModel.push_back(0.50);
- stdModel.push_back(0.75);
- stdModel.push_back(0.90);
- filter->AddDescriptor("NONDVI", stdModel);
- filter->AddDescriptor("ROADSA", stdModel);
- filter->AddDescriptor("NOBUIL", stdModel);
-
- FuzzyManagerType::Print(filter->GetDescriptorModels());
-
- vdWriter->SetFileName(outputVD);
- vdWriter->SetInput(filter->GetOutput());
- vdWriter->Update();
-
- std::cout << "Input VectorData Size : "
- << vdReader->GetOutput()->Size() << std::endl
- << "CriterionFormula : "
- << filter->GetCriterionFormula() << std::endl
- << "Output VecttorData Size : "
- << filter->GetOutput()->Size()
- << std::endl;
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/CMakeLists.txt b/Modules/OBIA/RCC8/CMakeLists.txt
deleted file mode 100644
index 6fca751fa59c10469a9a3699bad9ee2b893dcd8b..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/CMakeLists.txt
+++ /dev/null
@@ -1,24 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBRCC8)
-
-set(OTBRCC8_LIBRARIES OTBRCC8)
-otb_module_impl()
diff --git a/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.h b/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.h
deleted file mode 100644
index 9169b4ecd88b7b116268d4e70297078ddd320348..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.h
+++ /dev/null
@@ -1,89 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageListToRCC8GraphFilter_h
-#define otbImageListToRCC8GraphFilter_h
-
-#include "otbRCC8GraphSource.h"
-#include "otbImageList.h"
-
-namespace otb
-{
-/** \class ImageListToRCC8GraphFilter
- * \brief Base class for filters taking an images list as input to
- * produce a RCC8 graph.
- *
- * \ingroup OTBRCC8
- */
-template <class TInputImage, class TOutputGraph>
-class ITK_EXPORT ImageListToRCC8GraphFilter
- : public RCC8GraphSource<TOutputGraph>
-{
-public:
- /** Standard typedefs */
- typedef ImageListToRCC8GraphFilter Self;
- typedef RCC8GraphSource<TOutputGraph> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Type macro */
- itkNewMacro(Self);
- /** Creation through object factory macro */
- itkTypeMacro(ImageListToRCC8GraphFilter, RCC8GraphSource);
- /** Template input parameters typedefs */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImagePointer;
- typedef typename InputImageType::RegionType InputImageRegionType;
- typedef typename InputImageType::PixelType InputImagePixelType;
- typedef typename InputImageType::SizeType SizeType;
- typedef typename InputImageType::ValueType ValueType;
- typedef ImageList<InputImageType> InputImageListType;
- typedef typename InputImageListType::Pointer InputImageListPointerType;
- typedef typename InputImageListType::ConstPointer InputImageListConstPointer;
- /** Template output parameters typedefs */
- typedef TOutputGraph OutputGraphType;
- typedef typename Superclass::OutputGraphPointerType OutputGraphPointerType;
- typedef typename OutputGraphType::VertexType VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- typedef typename OutputGraphType::RCC8ValueType RCC8ValueType;
- /** InputImage dimension constant */
- itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
- /** Overriding the SetInput() and GetInput() methods */
- using Superclass::SetInput;
- virtual void SetInput(const InputImageListType * imageList);
- virtual InputImageListType * GetInput(void);
-
-protected:
- /** Constructor */
- ImageListToRCC8GraphFilter();
- /** Destructor */
- ~ImageListToRCC8GraphFilter() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- ImageListToRCC8GraphFilter(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbImageListToRCC8GraphFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.hxx b/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.hxx
deleted file mode 100644
index cab322360e9c030331788328f1e7069c0dd3c63d..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageListToRCC8GraphFilter.hxx
+++ /dev/null
@@ -1,79 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageListToRCC8GraphFilter_hxx
-#define otbImageListToRCC8GraphFilter_hxx
-
-#include "otbImageListToRCC8GraphFilter.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputImage, class TOutputGraph>
-ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>
-::ImageListToRCC8GraphFilter()
-{
- this->SetNumberOfRequiredInputs(1);
-}
-/**
- * Input Connection
- * \param image The input image.
- */
-template <class TInputImage, class TOutputGraph>
-void
-ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>
-::SetInput(const InputImageListType *imageList)
-{
- // A single input image
- this->itk::ProcessObject::SetNthInput(0, const_cast<InputImageListType*>(imageList));
-}
-/**
- * Input image retrieval
- * \return The input image.
- */
-template <class TInputImage, class TOutputGraph>
-typename ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>::InputImageListType *
-ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>
-::GetInput(void)
-{
- // If there is no input
- if (this->GetNumberOfInputs() < 1)
- {
- // exit
- return nullptr;
- }
- // else return the first input
- return static_cast<InputImageListType *>
- (this->itk::ProcessObject::GetInput(0));
-}
-/**
- * PrintSelf Method
- */
-template <class TInputImage, class TOutputGraph>
-void
-ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.h b/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.h
deleted file mode 100644
index 5c198e6720935e7699397a4132035b1b1a65f40f..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.h
+++ /dev/null
@@ -1,112 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageMultiSegmentationToRCC8GraphFilter_h
-#define otbImageMultiSegmentationToRCC8GraphFilter_h
-
-#include "otbImageListToRCC8GraphFilter.h"
-
-namespace otb
-{
-/**
- * \class ImageMultiSegmentationToRCC8GraphFilter
- * \brief This class takes a list of labelled segmentation images
- * and build the RCC8 graph of the set of regions it represents.
- *
- * \ingroup OTBRCC8
- */
-template <class TInputImage, class TOutputGraph>
-class ITK_EXPORT ImageMultiSegmentationToRCC8GraphFilter
- : public ImageListToRCC8GraphFilter<TInputImage, TOutputGraph>
-{
-public:
- /** Standard class typedefs. */
- typedef ImageMultiSegmentationToRCC8GraphFilter Self;
- typedef ImageListToRCC8GraphFilter<TInputImage, TOutputGraph> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(ImageMultiSegmentationToRCC8GraphFilter, ImageListToRCC8GraphFilter);
- /** Input related typedefs */
- typedef TInputImage InputImageType;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::Pointer InputImagePointerType;
- typedef typename Superclass::InputImageListType InputImageListType;
- typedef typename InputImageListType::Pointer InputImageListPointerType;
- typedef typename InputImageListType::ConstIterator ConstListIteratorType;
- /** Output related typedefs */
- typedef TOutputGraph OutputGraphType;
- typedef typename OutputGraphType::Pointer OutputGraphPointerType;
- typedef typename OutputGraphType::VertexType VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- typedef typename VertexType::PathType PathType;
- typedef typename OutputGraphType::VertexDescriptorType VertexDescriptorType;
- /** Knowledge enum typedef */
- typedef typename OutputGraphType::RCC8ValueType RCC8ValueType;
- typedef enum {NO_INFO, LEVEL_1, LEVEL_3, FULL} KnowledgeValueType;
- typedef std::pair<KnowledgeValueType, RCC8ValueType> KnowledgeStateType;
- /** Toogle optimisation flag */
- itkBooleanMacro(Optimisation);
- itkSetMacro(Optimisation, bool);
-
- /**
- * Get the number of occurrences of the given value
- * \return The value.
- */
- unsigned int GetRelationsCount(RCC8ValueType val);
-
- /**
- * Get number of relations
- * \return The number of relations.
- */
- unsigned int GetNumberOfRelations(void);
-
-protected:
- /** Constructor */
- ImageMultiSegmentationToRCC8GraphFilter();
- /** Destructor */
- ~ImageMultiSegmentationToRCC8GraphFilter() override;
- /** Main computation method */
- void GenerateData() override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /**
- * Get the composition knowledge.
- * \param r1 First RCC8 relation value,
- * \param r2 Second RCC8 relation value,
- * \return The knowledge associated with the composition.
- */
- KnowledgeStateType GetKnowledge(RCC8ValueType r1, RCC8ValueType r2);
-
-private:
- /** Optimisation flag */
- bool m_Optimisation;
- unsigned int m_Accumulator[8];
-
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbImageMultiSegmentationToRCC8GraphFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.hxx b/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.hxx
deleted file mode 100644
index 8b9906bc6b92547e7bf10d9696597b9ea6f8f296..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageMultiSegmentationToRCC8GraphFilter.hxx
+++ /dev/null
@@ -1,315 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageMultiSegmentationToRCC8GraphFilter_hxx
-#define otbImageMultiSegmentationToRCC8GraphFilter_hxx
-
-#include "otbImageMultiSegmentationToRCC8GraphFilter.h"
-#include "itkMinimumMaximumImageCalculator.h"
-#include "otbPolygonToPolygonRCC8Calculator.h"
-#include "otbRCC8VertexIterator.h"
-#include "otbRCC8InEdgeIterator.h"
-#include "otbRCC8OutEdgeIterator.h"
-#include "itkProgressReporter.h"
-#include "otbImageToEdgePathFilter.h"
-#include "otbSimplifyPathListFilter.h"
-
-namespace otb
-{
-/**
- * Constructor.
- */
-template <class TInputImage, class TOutputGraph>
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::ImageMultiSegmentationToRCC8GraphFilter()
-{
- m_Optimisation = false;
-}
-/**
- * Destructor.
- */
-template <class TInputImage, class TOutputGraph>
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::~ImageMultiSegmentationToRCC8GraphFilter()
-{}
-
-template <class TInputImage, class TOutputGraph>
-unsigned int
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::GetRelationsCount(RCC8ValueType val)
-{
- return m_Accumulator[val];
-}
-
-template <class TInputImage, class TOutputGraph>
-unsigned int
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::GetNumberOfRelations()
-{
- unsigned int result = 0;
- for (unsigned int i = 0; i < 8; ++i)
- {
- result += m_Accumulator[i];
-
- }
- return result;
-}
-template <class TInputImage, class TOutputGraph>
-typename ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::KnowledgeStateType
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::GetKnowledge(RCC8ValueType r1, RCC8ValueType r2)
-{
- m_Accumulator[0] = 0;
- m_Accumulator[1] = 0;
- m_Accumulator[2] = 0;
- m_Accumulator[3] = 0;
- m_Accumulator[4] = 0;
- m_Accumulator[5] = 0;
- m_Accumulator[6] = 0;
- m_Accumulator[7] = 0;
-
- // otbMsgDebugMacro(<<"RCC8GraphFilter: entering GetKnowledge method.");
- // This is the RCC8 composition table
- const int knowledge[8][8]
- =
- {
- /** DC EC PO TPP TPPi NTPP i EQ */
- /** DC */ {-3, -2, -2, -2, 0, -2, 0, 0},
- /** EC */ {-1, -3, -2, -3, -1, -3, 0, 1},
- /** PO */ {-1, -1, -3, -3, -1, -3, -1, 2},
- /** TPP */ { 0, -1, -2, -3, -3, 5, -1, 3},
- /** TPPi*/ {-1, -1, -1, -3, -1, -3, 6, 4},
- /** NTPP*/ { 0, 0, -2, 5, -2, 5, -3, 5},
- /** NTPPi*/ {-1, -1, -1, -1, 6, -3, 6, 6},
- /** EQ */ { 0, 1, 2, 3, 4, 5, 6, 7}
- };
-
- int value = knowledge[r1][r2];
- // Each negative case correspond to a level of knowledge
- if (value >= 0)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method: FULL");
- return KnowledgeStateType(FULL, static_cast<RCC8ValueType>(value));
- }
- else if (value == -1)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method: LEVEL_1");
- return KnowledgeStateType(LEVEL_1, OTB_RCC8_DC);
- }
- else if (value == -2)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method.LEVEL_3");
- return KnowledgeStateType(LEVEL_3, OTB_RCC8_DC);
- }
- else
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method.NO_INFO");
- return KnowledgeStateType(NO_INFO, OTB_RCC8_DC);
- }
-}
-/**
- * Main computation method.
- */
-template <class TInputImage, class TOutputGraph>
-void
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::GenerateData()
-{
- // Input image list pointer
- InputImageListPointerType segList = this->GetInput();
-
- // Output graph pointer
- OutputGraphPointerType graph = this->GetOutput();
-
- // invert value vector
- RCC8ValueType invert[8] = {OTB_RCC8_DC, OTB_RCC8_EC, OTB_RCC8_PO, OTB_RCC8_TPPI,
- OTB_RCC8_TPP, OTB_RCC8_NTPPI, OTB_RCC8_NTPP, OTB_RCC8_EQ};
-
- // Some typedefs
- typedef otb::ImageToEdgePathFilter<InputImageType, PathType> EdgeExtractionFilterType;
- typedef otb::SimplifyPathListFilter<PathType> SimplifyPathFilterType;
- typedef typename SimplifyPathFilterType::InputListType PathListType;
-
- typedef itk::MinimumMaximumImageCalculator<InputImageType> MinMaxCalculatorType;
- typedef PolygonToPolygonRCC8Calculator<PathType> RCC8CalculatorType;
- typedef RCC8VertexIterator<OutputGraphType> VertexIteratorType;
- typedef RCC8InEdgeIterator<OutputGraphType> InEdgeIteratorType;
-
-
- // Vector of label
- std::vector<PixelType> maxLabelVector;
-
- // Vertex indexes
- unsigned int vertexIndex = 0;
- unsigned int segmentationImageIndex = 0;
- unsigned int nbVertices = 0;
-
- // For each segmentation image
- for (ConstListIteratorType it = segList->Begin(); it != segList->End(); ++it)
- {
- // Compute the maximum label
- typename MinMaxCalculatorType::Pointer minMax = MinMaxCalculatorType::New();
- minMax->SetImage(it.Get());
- minMax->ComputeMaximum();
- maxLabelVector.push_back(minMax->GetMaximum());
- otbMsgDebugMacro(<< "Number of objects in image " << segmentationImageIndex << ": "
- << minMax->GetMaximum());
-
- // then for each region of the images
- for (PixelType label = 1; label <= maxLabelVector.back(); ++label)
- {
- typename PathListType::Pointer region = PathListType::New();
- typename EdgeExtractionFilterType::Pointer extraction = EdgeExtractionFilterType::New();
- extraction->SetInput(it.Get());
- extraction->SetForegroundValue(label);
- extraction->Update();
- region->PushBack(extraction->GetOutput());
- typename SimplifyPathFilterType::Pointer simplifier = SimplifyPathFilterType::New();
- simplifier->SetInput(region);
- simplifier->GetFunctor().SetTolerance(0.1);
- simplifier->Update();
-
- // Create a new vertex
- VertexPointerType vertex = VertexType::New();
- // Set its properties
- vertex->SetPath(simplifier->GetOutput()->GetNthElement(0));
- vertex->SetSegmentationLevel(segmentationImageIndex / 2);
- vertex->SetSegmentationType(segmentationImageIndex % 2);
- // Put it in the graph
- graph->SetVertex(vertexIndex, vertex);
- ++vertexIndex;
- ++nbVertices;
- }
- ++segmentationImageIndex;
- }
-
- itk::ProgressReporter progress(this, 0, nbVertices*nbVertices);
-
- VertexIteratorType vIt1(graph);
- VertexIteratorType vIt2(graph);
-
- // For each couple of vertices
- for (vIt1.GoToBegin(); !vIt1.IsAtEnd(); ++vIt1)
- {
- for (vIt2.GoToBegin(); !vIt2.IsAtEnd(); ++vIt2)
- {
- //We do not examine each couple because of the RCC8 symmetry
- if (vIt1.GetIndex() < vIt2.GetIndex())
- {
-
- // Compute the RCC8 relation
- typename RCC8CalculatorType::Pointer calc = RCC8CalculatorType::New();
- calc->SetPolygon1(vIt1.Get()->GetPath());
- calc->SetPolygon2(vIt2.Get()->GetPath());
- RCC8ValueType value = OTB_RCC8_DC;
-
- // if the optimisations are activated
- if (m_Optimisation)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: Entering optimisation loop");
- InEdgeIteratorType inIt1(vIt1.GetIndex(), graph);
- InEdgeIteratorType inIt2(vIt2.GetIndex(), graph);
- // otbMsgDebugMacro(<<"Optimisation loop: iterators initialised");
- VertexDescriptorType betweenIndex;
- KnowledgeStateType know(NO_INFO, OTB_RCC8_DC);
- inIt1.GoToBegin();
-
- // Iterate through the edges going to the first vertex
- while (!inIt1.IsAtEnd() && (know.first != FULL))
- {
- betweenIndex = inIt1.GetSourceIndex();
- inIt2.GoToBegin();
- bool edgeFound = false;
- while (!inIt2.IsAtEnd() && (know.first != FULL))
- {
- // try to find an intermediate vertex between the two ones which
- // we vant to compute the relationship
- if (inIt2.GetSourceIndex() == betweenIndex)
- {
- // if an intermediate vertex is found
- edgeFound = true;
- // otbMsgDebugMacro(<<"Optimisation loop: found an intermediary vertex:" <<betweenIndex);
- // See if it brings some info on the RCCC8 value
- know = GetKnowledge(invert[inIt1.GetValue()], inIt2.GetValue());
- calc->SetLevel1APrioriKnowledge(know.first == LEVEL_1);
- calc->SetLevel3APrioriKnowledge(know.first == LEVEL_3);
- // otbMsgDebugMacro(<<"Optimisation loop: knowledge: "<<know.first<<","<<know.second);
- }
- ++inIt2;
- }
- // If no intermediate was found
- if (!edgeFound)
- {
- // otbMsgDebugMacro(<<"Optimisation loop: found an intermediary vertex:" <<betweenIndex);
- // Try using a DC relationship
- know = GetKnowledge(invert[inIt1.GetValue()], OTB_RCC8_DC);
- calc->SetLevel1APrioriKnowledge(know.first == LEVEL_1);
- calc->SetLevel3APrioriKnowledge(know.first == LEVEL_3);
- // otbMsgDebugMacro(<<"Optimisation loop: knowledge: "<<know.first<<","<<know.second);
- }
- ++inIt1;
- }
- // If the search has fully determined the RCC8
- if (know.first == FULL)
- {
- // Get the value
- value = know.second;
- }
- else
- {
- // Else trigger the computation
- // (which will take the optimisation phase info into account)
- calc->Compute();
- value = calc->GetValue();
- }
- // otbMsgDebugMacro(<<"RCC8GraphFilter: Leaving optimisation loop");
- }
- // If the optimisations are not activated
- else
- {
- calc->Compute();
- value = calc->GetValue();
- }
- m_Accumulator[value] += 1;
- m_Accumulator[invert[value]] += 1;
- // If the vertices are connected
- if (value > OTB_RCC8_DC)
- {
- // Add the edge to the graph.
- otbMsgDevMacro(<< "Adding edge: " << vIt1.GetIndex() << " -> " << vIt2.GetIndex() << ": " << value);
- graph->AddEdge(vIt1.GetIndex(), vIt2.GetIndex(), value);
- }
- }
- progress.CompletedPixel();
- progress.CompletedPixel();
- }
- }
-}
-
-template <class TInputImage, class TOutputGraph>
-void
-ImageMultiSegmentationToRCC8GraphFilter<TInputImage, TOutputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.h b/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.h
deleted file mode 100644
index d2a4fb922a0b22534b1ee8e10775c094be823ddf..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.h
+++ /dev/null
@@ -1,203 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToImageRCC8Calculator_h
-#define otbImageToImageRCC8Calculator_h
-
-#include "itkImageToImageFilter.h"
-#include "itkObjectFactory.h"
-#include "otbRCC8Value.h"
-#include "otbImage.h"
-
-namespace otb
-{
-/**
- * \class ImageToImageRCC8Calculator
- * \brief This class compute the RCC8 relation between the regions from two segmentation images.
- *
- * The RCC8 system comes from qualitative spatial reasoning.
- * It is a set of pairwise disjoint exhaustive relation between two closed region of space.
- * There are 8 possible relations :
- * DC: Disconnected
- * EC: Externaly connected
- * PO: Partial overlap
- * TPP: Tangential proper part
- * NTPP: Non tangential proper part
- * TPPI: Tangential proper part inverse
- * NTPPI: Non tangential proper part inverse
- * EQ: Equivalence
- *
- * The goal of this class is to determine which of these 8 relations link the two inputs regions represented
- * by the segmentation images. Since this class will further be used iteratively on a possibly large set
- * of region, it is optimised : the decision is managed by a decision tree, and the input data size is reduced
- * to the smallest set needed to determine the relation.
- *
- * \ingroup OTBRCC8
- */
-template <class TInputImage>
-class ITK_EXPORT ImageToImageRCC8Calculator : public itk::ImageToImageFilter<TInputImage, TInputImage>
-{
-public:
- /** Standard class typedefs. */
- typedef ImageToImageRCC8Calculator Self;
- typedef itk::ImageToImageFilter<TInputImage, TInputImage> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(ImageToImageRCC8Calculator, ImageToImageFilter);
- /** Types definitions for the input image. */
- typedef TInputImage ImageType;
- typedef typename ImageType::Pointer ImagePointerType;
- typedef typename ImageType::ConstPointer ImageConstPointerType;
- typedef typename ImageType::PixelType PixelType;
- typedef typename ImageType::IndexType IndexType;
- typedef typename ImageType::RegionType RegionType;
- /** Internal bool image type */
- typedef bool BoolPixelType;
- typedef otb::Image<BoolPixelType, ImageType::ImageDimension> BoolImageType;
- typedef typename BoolImageType::Pointer BoolImagePointerType;
-
- /** RCC8 values type */
- typedef RCC8Value RCC8ValueType;
- /**
- * Get the RCC8 relation.
- * \return The RCC8 relation value.
- */
- RCC8ValueType GetValue(void);
- /**
- * Set the first input image.
- * \param image
- */
- void SetInput1(ImageType * image);
- /**
- * Set the second input image.
- * \param image
- */
- void SetInput2(ImageType * image);
- /**
- * Get the first input image.
- * \return The first input image.
- */
- ImageType * GetInput1(void);
- /**
- * Get the second input image.
- * \return The second input image.
- */
- ImageType * GetInput2(void);
- /** Set/Get the inside value of the region of image 1*/
- itkSetMacro(InsideValue1, PixelType);
- itkGetMacro(InsideValue1, PixelType);
- /** Set/Get the inside value of the region of image 2*/
- itkSetMacro(InsideValue2, PixelType);
- itkGetMacro(InsideValue2, PixelType);
- /** Set external knowledge to help the decision process */
- itkSetMacro(Level1APrioriKnowledge, bool);
- itkSetMacro(Level3APrioriKnowledge, bool);
- itkGetMacro(Level1APrioriKnowledge, bool);
- itkGetMacro(Level3APrioriKnowledge, bool);
-protected:
- /** Constructor */
- ImageToImageRCC8Calculator();
- /** Destructor */
- ~ImageToImageRCC8Calculator() override {}
- /**
- * Compute the minimal image region required.
- * \return The minimal region required.
- */
- RegionType ComputeMinimalRegion(void);
- /**
- * Compute the intersection between regions edges.
- * \return true if the intersection is not empty.
- */
- bool ComputeEdgeEdgeBool(void);
- /**
- * Compute the intersection between exterior of region1 and
- * interior of region2.
- * \return true if the intersection is not empty.
- */
- bool ComputeExterInterBool(void);
- /**
- * Compute the intersection between interior of region1 and
- * exterior of region2.
- * \return true if the intersection is not empty.
- */
- bool ComputeInterExterBool(void);
- /**
- * Compute the intersection between regions interiors.
- * \return true if the intersection is not empty.
- */
- bool ComputeInterInterBool(void);
- /**
- * Compute the relation value from the input booleans. Please note
- * that the actual computed value is set to the m_Value parameters, and has
- * nothing to do with the returned boolean, which indicates if the determination
- * process was successful.
- * \param edgeEdgeBool True if edge-edge intersection is not empty.
- * \param interExterBool True if interior-exterior intersection is not empty.
- * \param exterInterBool True if exterior-interior intersection is not empty.
- * \return True if the decision process was successful.
- */
- bool ComputeRelation(bool edgeEdgeBool, bool interExterBool, bool exterInterBool);
- /**
- * Test if the boolean image is totally black or not. This is a based on the lazy operator
- * paradigm.
- * \param image The image to test.
- * \return True or false.
- */
- bool IsBoolImageNotEmpty(BoolImagePointerType image);
- /**
- * Compute a bool image of minimal ROI size, surrounded by a false padding, and corresponding
- * to the input image.
- * \param image The image to convert.
- * \param insideValue The inside value.
- * \return The converted image
- */
- BoolImagePointerType ConvertToBoolImage(ImagePointerType image, PixelType insideValue);
- /** Main computation method */
- void GenerateData(void) override;
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** The RCC8 relation value */
- RCC8ValueType m_Value;
- /** The minimal ROI needed to compute the relation value */
- RegionType m_MinimalROI;
- /** Decision tree Level 1 A priori knowledge */
- bool m_Level1APrioriKnowledge;
- /** Decision tree Level 3 A priori knowledge */
- bool m_Level3APrioriKnowledge;
- /** Inside value 1 */
- PixelType m_InsideValue1;
- /** Inside value 2 */
- PixelType m_InsideValue2;
- /** Internal bool image representation*/
- BoolImagePointerType m_BoolImage1;
- BoolImagePointerType m_BoolImage2;
-};
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbImageToImageRCC8Calculator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.hxx b/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.hxx
deleted file mode 100644
index decd905bf7c446e19bfd0206bea0e59bd43e77ed..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbImageToImageRCC8Calculator.hxx
+++ /dev/null
@@ -1,528 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbImageToImageRCC8Calculator_hxx
-#define otbImageToImageRCC8Calculator_hxx
-
-#include "otbImageToImageRCC8Calculator.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkBinaryDilateImageFilter.h"
-#include "itkBinaryBallStructuringElement.h"
-#include "itkInvertIntensityImageFilter.h"
-#include "itkSubtractImageFilter.h"
-#include "itkAndImageFilter.h"
-#include "itkImageRegionIterator.h"
-#include "otbBinaryImageMinimalBoundingRegionCalculator.h"
-#include "otbMacro.h"
-
-//TODELETE #include "otbImageFileWriter.h"
-//TODELETE #include "itkCastImageFilter.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template<class TInputImage>
-ImageToImageRCC8Calculator<TInputImage>
-::ImageToImageRCC8Calculator()
-{
- m_Value = OTB_RCC8_DC;
- m_InsideValue1 = static_cast<PixelType>(255);
- m_InsideValue2 = static_cast<PixelType>(255);
- m_Level1APrioriKnowledge = false;
- m_Level3APrioriKnowledge = false;
- this->SetNumberOfRequiredInputs(2);
-}
-/**
- * Set the first input image.
- * \param image
- */
-template<class TInputImage>
-void
-ImageToImageRCC8Calculator<TInputImage>
-::SetInput1(ImageType * image)
-{
- this->SetNthInput(0, const_cast<ImageType *>(image));
-}
-/**
- * Set the second input image.
- * \param image
- */
-template<class TInputImage>
-void
-ImageToImageRCC8Calculator<TInputImage>
-::SetInput2(ImageType * image)
-{
- this->SetNthInput(1, const_cast<ImageType *>(image));
-}
-/**
- * Get the first input image.
- * \return The first input image.
- */
-template<class TInputImage>
-typename ImageToImageRCC8Calculator<TInputImage>
-::ImageType*
-ImageToImageRCC8Calculator<TInputImage>
-::GetInput1(void)
-{
- return dynamic_cast<ImageType*>(this->itk::ProcessObject::GetInput(0));
-}
-/**
- * Get the second input image.
- * \return The second input image.
- */
-template<class TInputImage>
-typename ImageToImageRCC8Calculator<TInputImage>
-::ImageType*
-ImageToImageRCC8Calculator<TInputImage>
-::GetInput2(void)
-{
- return dynamic_cast<ImageType*>(this->itk::ProcessObject::GetInput(1));
-}
-/**
- * Get the RCC8 relation.
- * \return The RCC8 relation value.
- */
-template <class TInputImage>
-typename ImageToImageRCC8Calculator<TInputImage>
-::RCC8ValueType
-ImageToImageRCC8Calculator<TInputImage>
-::GetValue(void)
-{
- return m_Value;
-}
-/**
- * Compute the minimal image region required.
- * \return The minimal region required.
- */
-template <class TInputImage>
-typename ImageToImageRCC8Calculator<TInputImage>
-::RegionType
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeMinimalRegion(void)
-{
- // Input images pointers
- typename ImageType::Pointer image1 = this->GetInput1();
- typename ImageType::Pointer image2 = this->GetInput2();
- typename ImageType::RegionType region1, region2, region;
- typedef otb::BinaryImageMinimalBoundingRegionCalculator<ImageType> RegionCalculator;
- typename RegionCalculator::Pointer rc = RegionCalculator::New();
- rc->SetInput(image1);
- rc->SetPad(2);
- rc->SetInsideValue(this->GetInsideValue1());
- rc->Update();
- region1 = rc->GetRegion();
- rc = RegionCalculator::New();
- rc->SetInput(image2);
- rc->SetPad(2);
- rc->SetInsideValue(this->GetInsideValue2());
- rc->Update();
- region2 = rc->GetRegion();
- // otbMsgDebugMacro(<<"RCC8Calculator->ComputeMinimalRegion() Region1: index: "<<region1.GetIndex()<<" size: "<<region1.GetSize());
- // otbMsgDebugMacro(<<"RCC8Calculator->ComputeMinimalRegion() Region2: index: "<<region2.GetIndex()<<" size: "<<region2.GetSize());
-
- //TODELETE std::cout<<"RCC8Calculator->ComputeMinimalRegion() Region1: index: "<<region1.GetIndex()<<" size: "<<region1.GetSize()<<std::endl;
-//TODELETE std::cout<<"RCC8Calculator->ComputeMinimalRegion() Region2: index: "<<region2.GetIndex()<<" size: "<<region2.GetSize()<<std::endl;
-
- typename ImageType::SizeType size;
- typename ImageType::IndexType index;
-
- for (unsigned int i = 0; i < ImageType::ImageDimension; ++i)
- {
- index[i] = std::min(region1.GetIndex()[i], region2.GetIndex()[i]);
- int potSize = std::max(region1.GetIndex()[i] + region1.GetSize()[i],
- region2.GetIndex()[i] + region2.GetSize()[i]);
- size[i] = (potSize - index[i] < 0 ? 0 : potSize - index[i]);
- }
- region.SetIndex(index);
- region.SetSize(size);
- region.PadByRadius(2);
- region.Crop(image1->GetLargestPossibleRegion());
- region.Crop(image2->GetLargestPossibleRegion());
- // otbMsgDebugMacro(<<"RCC8Calculator->ComputeMinimalRegion(): index: "<<index<<" size: "<<size);
- //TODELETE std::cout<<"RCC8Calculator->ComputeMinimalRegion(): index: "<<index<<" size: "<<size<<std::endl;
- return region;
-}
-/**
- * Compute a bool image of minimal ROI size, surrounded by a false padding, and corresponding
- * to the input image.
- * \param image The image to convert.
- * \param insideValue The inside value.
- * \return The converted image
- */
-template<class TInputImage>
-typename ImageToImageRCC8Calculator<TInputImage>
-::BoolImagePointerType
-ImageToImageRCC8Calculator<TInputImage>
-::ConvertToBoolImage(ImagePointerType image, PixelType insideValue)
-{
- typedef itk::ImageRegionConstIterator<ImageType> ConstIterator;
- typedef itk::ImageRegionIterator<BoolImageType> Iterator;
- typename BoolImageType::Pointer output = BoolImageType::New();
- typename BoolImageType::SizeType boolImageSize;
- boolImageSize[0] = m_MinimalROI.GetSize()[0] + 2;
- boolImageSize[1] = m_MinimalROI.GetSize()[1] + 2;
- typename BoolImageType::IndexType boolImageIndex;
- boolImageIndex[0] = m_MinimalROI.GetIndex()[0] - 1;
- boolImageIndex[1] = m_MinimalROI.GetIndex()[1] - 1;
- //otbMsgDebugMacro(<<"RCC8Calculator->ConvertToBoolImage() size: "<<boolImageSize<<" index: "<<boolImageIndex);
-
- typename BoolImageType::RegionType boolRegion;
- boolRegion.SetSize(boolImageSize);
- boolRegion.SetIndex(boolImageIndex);
- output->SetRegions(boolRegion);
- output->Allocate();
- output->FillBuffer(false);
-
- ConstIterator inputIt(image, m_MinimalROI);
- Iterator outputIt(output, m_MinimalROI);
- inputIt.GoToBegin();
- outputIt.GoToBegin();
- while (!inputIt.IsAtEnd() && !outputIt.IsAtEnd())
- {
- outputIt.Set(inputIt.Get() == insideValue);
- ++inputIt;
- ++outputIt;
- }
-
- return output;
-}
-/**
- * Compute the intersection between regions edges.
- * \return true if the intersection is not empty.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeEdgeEdgeBool(void)
-{
-
- /// Definition of the Filters used to compute the boolean
- typedef itk::SubtractImageFilter<BoolImageType, BoolImageType,
- BoolImageType>
- SubtractFilterType;
- typedef itk::BinaryBallStructuringElement<bool,
- BoolImageType::ImageDimension>
- BinaryBallStructuringElementType;
- typedef itk::BinaryDilateImageFilter<BoolImageType, BoolImageType, BinaryBallStructuringElementType> DilateFilterType;
- typedef itk::AndImageFilter<BoolImageType, BoolImageType, BoolImageType> AndFilterType;
- /// Declaration and instantiation
- typename DilateFilterType::Pointer dilateFilter1 = DilateFilterType::New();
- typename DilateFilterType::Pointer dilateFilter2 = DilateFilterType::New();
- typename SubtractFilterType::Pointer subtractFilter1 = SubtractFilterType::New();
- typename SubtractFilterType::Pointer subtractFilter2 = SubtractFilterType::New();
- typename AndFilterType::Pointer andFilter = AndFilterType::New();
- /// Configuration of the erosion filter
- BinaryBallStructuringElementType structElement1, structElement2;
- structElement1.SetRadius(1);
- structElement2.SetRadius(1);
- structElement1.CreateStructuringElement();
- structElement2.CreateStructuringElement();
- dilateFilter1->SetKernel(structElement1);
- dilateFilter2->SetKernel(structElement2);
- /// The erosion is performed to get the surrounding edge of this
- /// region by subtraction to the original image
- dilateFilter1->SetInput(m_BoolImage1);
- dilateFilter1->Update();
- subtractFilter1->SetInput2(m_BoolImage1);
- subtractFilter1->SetInput1(dilateFilter1->GetOutput());
- subtractFilter1->Update();
- /// The erosion is performed to get the surrounding edge of this
- /// region by subtraction to the original image
- dilateFilter2->SetInput(m_BoolImage2);
- dilateFilter2->Update();
- subtractFilter2->SetInput2(m_BoolImage2);
- subtractFilter2->SetInput1(dilateFilter2->GetOutput());
- subtractFilter2->Update();
- /// Now we can compute the intersection between the 2 edges
- andFilter->SetInput1(subtractFilter1->GetOutput());
- andFilter->SetInput2(subtractFilter2->GetOutput());
- andFilter->Update();
- /// test if the intersection is empty or not
- return this->IsBoolImageNotEmpty(andFilter->GetOutput());
-}
-/**
- * Compute the intersection between exterior of region1 and
- * interior of region2.
- * \return true if the intersection is not empty.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeExterInterBool(void)
-{
- /// Definition of the filters used
- typedef itk::InvertIntensityImageFilter<BoolImageType, BoolImageType> InvertFilterType;
- typedef itk::AndImageFilter<BoolImageType, BoolImageType, BoolImageType> AndFilterType;
- /// Declaration and instantiation
- typename InvertFilterType::Pointer invert = InvertFilterType::New();
- typename AndFilterType::Pointer andFilter = AndFilterType::New();
- /// The exterior is the inverted input image
- invert->SetMaximum(true);
- invert->SetInput(m_BoolImage1);
- andFilter->SetInput1(m_BoolImage2);
- andFilter->SetInput2(invert->GetOutput());
- andFilter->Update();
- /// test if the intersection is empty or not
- return IsBoolImageNotEmpty(andFilter->GetOutput());
-}
-/**
- * Compute the intersection between interior of region1 and
- * exterior of region2.
- * \return true if the intersection is not empty.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeInterExterBool(void)
-{
- /// Definition of the filters used
- typedef itk::InvertIntensityImageFilter<BoolImageType, BoolImageType> InvertFilterType;
- typedef itk::AndImageFilter<BoolImageType, BoolImageType, BoolImageType> AndFilterType;
-//TODELETE typedef otb::Image<unsigned char, 2> TmpImageType;
-//TODELETE typedef itk::CastImageFilter<BoolImageType, TmpImageType> CastFilterType;
-
-//TODELETE typedef ImageFileWriter<TmpImageType> WriterType;
-/// Declaration and instantiation
- typename InvertFilterType::Pointer invert = InvertFilterType::New();
- typename AndFilterType::Pointer andFilter = AndFilterType::New();
- /// The exterior is the inverted input image
- invert->SetMaximum(true);
- invert->SetInput(m_BoolImage2);
-
-//TODELETE typename CastFilterType::Pointer caster = CastFilterType::New();
-//TODELETE caster->SetInput(invert->GetOutput());
-//TODELETE typename WriterType::Pointer writer = WriterType::New();
-//TODELETE writer->SetFileName("invert.tif");
-//TODELETE writer->SetInput(caster->GetOutput());
-//TODELETE writer->Update();
-
- andFilter->SetInput1(m_BoolImage1);
- andFilter->SetInput2(invert->GetOutput());
- andFilter->Update();
-
-//TODELETE caster = CastFilterType::New();
-//TODELETE caster->SetInput(andFilter->GetOutput());
-//TODELETE writer = WriterType::New();
-//TODELETE writer->SetFileName("and.tif");
-//TODELETE writer->SetInput(caster->GetOutput());
-//TODELETE writer->Update();
-
- /// test if the intersection is empty or not
- return IsBoolImageNotEmpty(andFilter->GetOutput());
-}
-/**
- * Compute the intersection between regions interiors.
- * \return true if the intersection is not empty.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeInterInterBool(void)
-{
- /// Definition of the filters used
- typedef itk::AndImageFilter<BoolImageType, BoolImageType, BoolImageType> AndFilterType;
-
- /// Declaration and instantiation
- typename AndFilterType::Pointer andFilter = AndFilterType::New();
- /// The exterior is the inverted input image
- andFilter->SetInput1(m_BoolImage1);
- andFilter->SetInput2(m_BoolImage2);
- andFilter->Update();
- /// test if the intersection is empty or not
- return IsBoolImageNotEmpty(andFilter->GetOutput());
-}
-/**
- * Compute the relation value from the input booleans. Please note
- * that the actual computed value is set to the m_Value parameters, and has
- * nothing to do with the returned boolean, which indicates if the determination
- * process was successful.
- * \param edgeEdgeBool True if edge-edge intersection is not empty.
- * \param interExterBool True if interior-exterior intersection is not empty.
- * \param exterInterBool True if exterior-interior intersection is not empty.
- * \return True if the decision process was successful.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::ComputeRelation(bool edgeEdgeBool, bool interExterBool, bool exterInterBool)
-{
- // otbMsgDebugMacro(<<"RCC8Calculator->ComputeRelation()");
- // This decision process is based on a decision tree
- if ((!interExterBool) && (edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_EQ;
- return true;
- }
- else if ((!interExterBool) && (edgeEdgeBool) && (exterInterBool))
- {
- m_Value = OTB_RCC8_TPP;
- return true;
- }
- else if ((interExterBool) && (!edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_NTPPI;
- return true;
- }
- else if ((interExterBool) && (!edgeEdgeBool) && (exterInterBool))
- {
- m_Value = OTB_RCC8_DC;
- return true;
- }
- else if ((interExterBool) && (edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_TPPI;
- return true;
- }
- else
- {
- return false;
- }
-}
-/**
- * Test if the boolean image is totally black or not. This is a based on the lazy operator
- * paradigm.
- * \param image The image to test.
- * \return True or false.
- */
-template<class TInputImage>
-bool
-ImageToImageRCC8Calculator<TInputImage>
-::IsBoolImageNotEmpty(BoolImagePointerType image)
-{
- typedef itk::ImageRegionConstIterator<BoolImageType> IteratorType;
- // TODO : we'll eventually need to change something.
- IteratorType it(image, image->GetLargestPossibleRegion());
- it.GoToBegin();
- while (!it.IsAtEnd())
- {
- if (it.Get())
- {
- return true;
- }
- ++it;
- }
- return false;
-}
-/**
- * Main computation method.
- */
-template <class TInputImage>
-void
-ImageToImageRCC8Calculator<TInputImage>
-::GenerateData(void)
-{
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData()");
- /// First we compute the minimal region of interest we will use for the relation computation
- m_MinimalROI = this->ComputeMinimalRegion();
- /// If they are disjoint, the answer is trivial
- if ((m_MinimalROI.GetSize()[0] <= 1) || (m_MinimalROI.GetSize()[1] <= 1))
- {
- /// The relation is DC
- m_Value = OTB_RCC8_DC;
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): Disjoint regions");
- }
- else
- {
- /// else each input images is cast to boolean type and reduced to
- // the minimal region
- m_BoolImage1 = ConvertToBoolImage(this->GetInput1(), m_InsideValue1);
- m_BoolImage2 = ConvertToBoolImage(this->GetInput2(), m_InsideValue2);
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): Bool images computed: "<<m_BoolImage1->GetLargestPossibleRegion().GetSize());
- /// Then the boolean which will be used to determine the relation
- /// are declared
- bool edgeEdgeBool, interExterBool, exterInterBool, interInterBool;
- /// The boolean edgeEdge is needed in each case, so it si computed
- /// now
- edgeEdgeBool = ComputeEdgeEdgeBool();
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): edgeEdge "<<edgeEdgeBool);
- //TODELETE std::cout<<"RCC8Calculator->GenerateData(): edgeEdge "<<edgeEdgeBool<<std::endl;
- /// Here comes the outside knowledge
- if (this->GetLevel1APrioriKnowledge())
- {
- /// If the Level1APrioriKnowledge is set, then the
- /// interExterBool is set to true
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): Level1APrioriKnowledge.");
- interExterBool = true;
- }
- else
- {
- /// Else it must be computed
- interExterBool = ComputeInterExterBool();
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): interExter "<<interExterBool);
- }
- /// At this stage we can determine if the relation is of type NTPP
- //TODELETE std::cout<<"RCC8Calculator->GenerateData(): interExter "<<interExterBool<<std::endl;
- if ((!interExterBool) && (!edgeEdgeBool))
- {
- m_Value = OTB_RCC8_NTPP;
- }
- else
- {
- /// If not, we must consider the intersection between exterior
- if (this->GetLevel3APrioriKnowledge())
- {
- /// If the Level3APRioriKnowledge flag is set, this boolean
- /// can be determined from the two others
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): Level3APrioriKnowledge.");
- exterInterBool = true;
- }
- else
- {
- /// Else it must be computed
- exterInterBool = ComputeExterInterBool();
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): ExterInter "<<exterInterBool);
- }
- //TODELETE std::cout<<"RCC8Calculator->GenerateData(): ExterInter "<<exterInterBool<<std::endl;
- /// If it is not sufficient to compute the relation
- if (!ComputeRelation(edgeEdgeBool, interExterBool, exterInterBool))
- {
- /// Compute the last boolean
- interInterBool = ComputeInterInterBool();
- //TODELETE std::cout<<"RCC8Calculator->GenerateData(): InterInter "<<interInterBool<<std::endl;
- // otbMsgDebugMacro(<<"RCC8Calculator->GenerateData(): InterInter "<<interInterBool);
- /// Which allow the full determination
- if ((interExterBool) && (edgeEdgeBool) && (exterInterBool) && (!interInterBool))
- {
- m_Value = OTB_RCC8_EC;
- }
- else
- {
- m_Value = OTB_RCC8_PO;
- }
- }
- }
- }
-}
-/**
-* PrintSelf method
-*/
-template<class TInputImage>
-void
-ImageToImageRCC8Calculator<TInputImage>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-
-} // end namespace itk
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.h b/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.h
deleted file mode 100644
index 7c2d8175a3cccfa6282af5e58125269886fd980b..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.h
+++ /dev/null
@@ -1,182 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPolygonListToRCC8GraphFilter_h
-#define otbPolygonListToRCC8GraphFilter_h
-
-#include "otbRCC8GraphSource.h"
-#include "otbPolygonToPolygonRCC8Calculator.h"
-#include "otbRCC8VertexIterator.h"
-#include "otbRCC8InEdgeIterator.h"
-#include "otbRCC8OutEdgeIterator.h"
-
-namespace otb
-{
-/**
- * \class PolygonListToRCC8GraphFilter
- * \brief This class computes an RCC8 graph from a set of polygons.
- * \sa ImageMultiSegmentationToRCC8GraphFilter
- *
- * \ingroup OTBRCC8
- */
-template <class TPolygonList, class TOutputGraph>
-class ITK_EXPORT PolygonListToRCC8GraphFilter
- : public RCC8GraphSource<TOutputGraph>
-{
-public:
- /** Standard class typedefs. */
- typedef PolygonListToRCC8GraphFilter Self;
- typedef RCC8GraphSource<TOutputGraph> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(PolygonListToRCC8GraphFilter, RCC8GraphSource);
-
- /** Input related typedef */
- typedef TPolygonList PolygonListType;
- typedef typename PolygonListType::ConstPointer PolygonListConstPointerType;
- typedef typename PolygonListType::ObjectType PolygonType;
- typedef typename PolygonType::Pointer PolygonPointerType;
-
- /** Output related typedefs */
- typedef TOutputGraph OutputGraphType;
- typedef typename OutputGraphType::Pointer OutputGraphPointerType;
- typedef typename OutputGraphType::VertexType VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- typedef typename VertexType::PathType PathType;
- typedef typename OutputGraphType::VertexDescriptorType VertexDescriptorType;
-
- /** Knowledge enum typedef */
- typedef typename OutputGraphType::RCC8ValueType RCC8ValueType;
- typedef enum {NO_INFO, LEVEL_1, LEVEL_3, FULL} KnowledgeValueType;
- typedef std::pair<KnowledgeValueType, RCC8ValueType> KnowledgeStateType;
-
- /** RCC8 calculator typedef */
- typedef PolygonToPolygonRCC8Calculator<PolygonType> RCC8CalculatorType;
-
- /** Graph iterators typedefs */
- typedef RCC8VertexIterator<OutputGraphType> VertexIteratorType;
- typedef RCC8InEdgeIterator<OutputGraphType> InEdgeIteratorType;
- typedef RCC8OutEdgeIterator<OutputGraphType> OutEdgeIteratorType;
-
- typedef typename VertexIteratorType::VertexDescriptorType EdgePairElementType;
- typedef std::pair<EdgePairElementType, EdgePairElementType> EdgePairType;
- typedef std::map<EdgePairType, RCC8ValueType> EdgeMapType;
- typedef std::vector<EdgeMapType> EdgeMapVectorType;
-
- typedef std::vector<unsigned int> SegmentationRangesType;
-
- /** Toogle optimisation flag */
- itkBooleanMacro(Optimisation);
- itkSetMacro(Optimisation, bool);
- itkBooleanMacro(UseInverted);
- itkSetMacro(UseInverted, bool);
-
- void SetSegmentationRanges(SegmentationRangesType ranges)
- {
- m_SegmentationRanges = ranges;
- }
-
- const SegmentationRangesType& GetSegmentationRanges() const
- {
- return m_SegmentationRanges;
- }
-
- /**
- * Get the number of occurrences of the given value
- * \return The value.
- */
- unsigned int GetRelationsCount(RCC8ValueType val);
-
- /**
- * Get number of relations
- * \return The number of relations.
- */
- unsigned int GetNumberOfRelations(void);
-
- using Superclass::SetInput;
- /** Set the input of the filter */
- virtual void SetInput(const PolygonListType *input);
- /** Get the input of the filter */
- const PolygonListType * GetInput(void);
-
-protected:
- /** Constructor */
- PolygonListToRCC8GraphFilter();
- /** Destructor */
- ~PolygonListToRCC8GraphFilter() override;
- /** Main computation method */
- void GenerateData() override;
-
- /** Multi-threading implementation */
-
- virtual void BeforeThreadedGenerateData();
-
- virtual void AfterThreadedGenerateData();
-
- /** startIndex and stopIndex represent the indices of the vertex to
- examine in thread threadId */
- virtual void ThreadedGenerateData(unsigned int startIndex, unsigned int stopIndex, itk::ThreadIdType threadId);
-
- /** Static function used as a "callback" by the MultiThreader. The threading
- * library will call this routine for each thread, which will delegate the
- * control to ThreadedGenerateData(). */
- static ITK_THREAD_RETURN_TYPE ThreaderCallback(void *arg);
-
- /** Internal structure used for passing image data into the threading library */
- struct ThreadStruct
- {
- Pointer Filter;
- };
-
- /** End Multi-threading implementation */
-
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /**
- * Get the composition knowledge.
- * \param r1 First RCC8 relation value,
- * \param r2 Second RCC8 relation value,
- * \return The knowledge associated with the composition.
- */
- KnowledgeStateType GetKnowledge(RCC8ValueType r1, RCC8ValueType r2);
-
-private:
- /** Optimisation flag */
- bool m_Optimisation;
- unsigned int m_Accumulator[8];
- EdgeMapVectorType m_EdgesPerThread;
-
- /** This array stores the indices corresponding to each segmentation */
- SegmentationRangesType m_SegmentationRanges;
-
- /** If set to true, the filter will also add the invert relationship
- * between v2 and v1 */
- bool m_UseInverted;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbPolygonListToRCC8GraphFilter.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.hxx b/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.hxx
deleted file mode 100644
index 10842bf64866a0753828b9cf23f056173dd90ee1..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbPolygonListToRCC8GraphFilter.hxx
+++ /dev/null
@@ -1,460 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPolygonListToRCC8GraphFilter_hxx
-#define otbPolygonListToRCC8GraphFilter_hxx
-
-#include "otbPolygonListToRCC8GraphFilter.h"
-#include "itkProgressReporter.h"
-
-namespace otb
-{
-/**
- * Constructor.
- */
-template <class TPolygonList, class TOutputGraph>
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::PolygonListToRCC8GraphFilter()
-{
- this->SetNumberOfRequiredInputs(1);
- m_Optimisation = false;
- m_UseInverted = false;
-}
-/**
- * Destructor.
- */
-template <class TPolygonList, class TOutputGraph>
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::~PolygonListToRCC8GraphFilter()
-{}
-
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::SetInput(const PolygonListType *input)
-{
- // Process object is not const-correct so the const_cast is required here
- this->itk::ProcessObject::SetNthInput(0,
- const_cast<PolygonListType *>(input));
-}
-
-template <class TPolygonList, class TOutputGraph>
-const typename PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>::PolygonListType *
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::GetInput(void)
-{
- if (this->GetNumberOfInputs() < 1)
- {
- return nullptr;
- }
-
- return static_cast<const TPolygonList *>
- (this->itk::ProcessObject::GetInput(0));
-}
-
-template <class TPolygonList, class TOutputGraph>
-unsigned int
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::GetRelationsCount(RCC8ValueType val)
-{
- return m_Accumulator[val];
-}
-
-template <class TPolygonList, class TOutputGraph>
-unsigned int
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::GetNumberOfRelations()
-{
- unsigned int result = 0;
- for (unsigned int i = 0; i < 8; ++i)
- {
- result += m_Accumulator[i];
-
- }
- return result;
-}
-template <class TPolygonList, class TOutputGraph>
-typename PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::KnowledgeStateType
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::GetKnowledge(RCC8ValueType r1, RCC8ValueType r2)
-{
- m_Accumulator[0] = 0;
- m_Accumulator[1] = 0;
- m_Accumulator[2] = 0;
- m_Accumulator[3] = 0;
- m_Accumulator[4] = 0;
- m_Accumulator[5] = 0;
- m_Accumulator[6] = 0;
- m_Accumulator[7] = 0;
-
- // otbMsgDebugMacro(<<"RCC8GraphFilter: entering GetKnowledge method.");
- // This is the RCC8 composition table
- const int knowledge[8][8]
- =
- {
- /** DC EC PO TPP TPPi NTPP i EQ */
- /** DC */ {-3, -2, -2, -2, 0, -2, 0, 0},
- /** EC */ {-1, -3, -2, -3, -1, -3, 0, 1},
- /** PO */ {-1, -1, -3, -3, -1, -3, -1, 2},
- /** TPP */ { 0, -1, -2, -3, -3, 5, -1, 3},
- /** TPPi*/ {-1, -1, -1, -3, -1, -3, 6, 4},
- /** NTPP*/ { 0, 0, -2, 5, -2, 5, -3, 5},
- /** NTPPi*/ {-1, -1, -1, -1, 6, -3, 6, 6},
- /** EQ */ { 0, 1, 2, 3, 4, 5, 6, 7}
- };
-
- int value = knowledge[r1][r2];
- // Each negative case correspond to a level of knowledge
- if (value >= 0)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method: FULL");
- return KnowledgeStateType(FULL, static_cast<RCC8ValueType>(value));
- }
- else if (value == -1)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method: LEVEL_1");
- return KnowledgeStateType(LEVEL_1, OTB_RCC8_DC);
- }
- else if (value == -2)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method.LEVEL_3");
- return KnowledgeStateType(LEVEL_3, OTB_RCC8_DC);
- }
- else
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: leaving GetKnowledge method.NO_INFO");
- return KnowledgeStateType(NO_INFO, OTB_RCC8_DC);
- }
-}
-/**
- * Main computation method.
- */
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::GenerateData()
-{
- // Call a method that can be overridden by a subclass to perform
- // some calculations prior to splitting the main computations into
- // separate threads
- this->BeforeThreadedGenerateData();
-
- // Set up the multithreaded processing
- ThreadStruct str;
- str.Filter = this;
-
- // // Initializing edges vectors per thread
- EdgeMapType defaultEdgeMap;
- m_EdgesPerThread = EdgeMapVectorType(this->GetNumberOfThreads(), defaultEdgeMap);
-
- // Setting up multithreader
- this->GetMultiThreader()->SetNumberOfThreads(this->GetNumberOfThreads());
- this->GetMultiThreader()->SetSingleMethod(this->ThreaderCallback, &str);
-
- // multithread the execution
- this->GetMultiThreader()->SingleMethodExecute();
-
- // Call a method that can be overridden by a subclass to perform
- // some calculations after all the threads have completed
- this->AfterThreadedGenerateData();
-}
-
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::BeforeThreadedGenerateData()
-{
- // Output graph pointer
- OutputGraphPointerType graph = this->GetOutput();
- PolygonListConstPointerType inputPtr = this->GetInput();
-
-// Initializing output graph
- graph->SetNumberOfVertices(inputPtr->Size());
- graph->Build();
-
- // Vertex indexes
- unsigned int nbVertices = 0;
-
- typedef typename PolygonListType::ConstIterator PolygonListConstIteratorType;
-
- // Loads the polygons list to graph nodes
- for (PolygonListConstIteratorType it = inputPtr->Begin();
- it != inputPtr->End(); ++it)
- {
- // Create a new vertex
- VertexPointerType vertex = VertexType::New();
- // Set its properties
- vertex->SetPath(it.Get());
-
- // look for the appropriate segmentation index
-
- unsigned int segIndex = 1;
-
- while (segIndex < m_SegmentationRanges.size() &&
- (nbVertices < m_SegmentationRanges[segIndex - 1] || nbVertices >= m_SegmentationRanges[segIndex]))
- {
- ++segIndex;
- }
-
- vertex->SetSegmentationLevel(segIndex - 1);
-
- // Put it in the graph
- graph->SetVertex(nbVertices, vertex);
- otbMsgDevMacro(<< "Adding vertex: " << nbVertices);
- ++nbVertices;
- }
-}
-
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::ThreadedGenerateData(unsigned int startIndex, unsigned int stopIndex, itk::ThreadIdType threadId)
-{
- //std::cout<<"Starting thread "<<threadId <<" to work on range ["<<startIndex<<", "<<stopIndex<<"]"<<std::endl;
-
- // Output graph pointer
- OutputGraphPointerType graph = this->GetOutput();
- PolygonListConstPointerType inputPtr = this->GetInput();
-
- // invert value vector
- RCC8ValueType invert[8] = {OTB_RCC8_DC, OTB_RCC8_EC, OTB_RCC8_PO, OTB_RCC8_TPPI,
- OTB_RCC8_TPP, OTB_RCC8_NTPPI, OTB_RCC8_NTPP, OTB_RCC8_EQ};
-
- unsigned int nbVertices = graph->GetNumberOfVertices();
- itk::ProgressReporter progress(this, threadId, ((int) stopIndex - (int) startIndex)*nbVertices);
-
- otbMsgDevMacro(<< "Adjacency matrix size: " << nbVertices * nbVertices);
-
- VertexIteratorType vIt1(graph);
- VertexIteratorType vIt2(graph);
-
- unsigned int count = 0;
-
- // For each couple of vertices
- for (vIt1.GoToBegin(); !vIt1.IsAtEnd(); ++vIt1)
- {
- // TODO: this is not correct and should be replaced by a
- // vIt1(graph, index1, index2), which does not exist for the moment
- if ((count >= startIndex) && (count < stopIndex))
- {
- for (vIt2.GoToBegin(); !vIt2.IsAtEnd(); ++vIt2)
- {
- //We do not examine each couple because of the RCC8 symmetry
- if (vIt1.GetIndex() < vIt2.GetIndex())
- {
-
- // Compute the RCC8 relation
- typename RCC8CalculatorType::Pointer calc = RCC8CalculatorType::New();
- calc->SetPolygon1(vIt1.Get()->GetPath());
- calc->SetPolygon2(vIt2.Get()->GetPath());
- RCC8ValueType value = OTB_RCC8_DC;
-
- // if the optimisations are activated
- if (m_Optimisation)
- {
- // otbMsgDebugMacro(<<"RCC8GraphFilter: Entering optimisation loop");
- InEdgeIteratorType inIt1(vIt1.GetIndex(), graph);
- InEdgeIteratorType inIt2(vIt2.GetIndex(), graph);
- // otbMsgDebugMacro(<<"Optimisation loop: iterators initialised");
- VertexDescriptorType betweenIndex;
- KnowledgeStateType know(NO_INFO, OTB_RCC8_DC);
- inIt1.GoToBegin();
-
- // Iterate through the edges going to the first vertex
- while (!inIt1.IsAtEnd() && (know.first != FULL))
- {
- betweenIndex = inIt1.GetSourceIndex();
- inIt2.GoToBegin();
- bool edgeFound = false;
- while (!inIt2.IsAtEnd() && (know.first != FULL))
- {
- // try to find an intermediate vertex between the two ones which
- // we vant to compute the relationship
- if (inIt2.GetSourceIndex() == betweenIndex)
- {
- // if an intermediate vertex is found
- edgeFound = true;
- // otbMsgDebugMacro(<<"Optimisation loop: found an intermediary vertex:" <<betweenIndex);
- // See if it brings some info on the RCCC8 value
- know = GetKnowledge(invert[inIt1.GetValue()], inIt2.GetValue());
- calc->SetLevel1APrioriKnowledge(know.first == LEVEL_1);
- calc->SetLevel3APrioriKnowledge(know.first == LEVEL_3);
- // otbMsgDebugMacro(<<"Optimisation loop: knowledge: "<<know.first<<","<<know.second);
- }
- ++inIt2;
- }
- // If no intermediate was found
- if (!edgeFound)
- {
- // otbMsgDebugMacro(<<"Optimisation loop: found an intermediary vertex:" <<betweenIndex);
- // Try using a DC relationship
- know = GetKnowledge(invert[inIt1.GetValue()], OTB_RCC8_DC);
- calc->SetLevel1APrioriKnowledge(know.first == LEVEL_1);
- calc->SetLevel3APrioriKnowledge(know.first == LEVEL_3);
- // otbMsgDebugMacro(<<"Optimisation loop: knowledge: "<<know.first<<","<<know.second);
- }
- ++inIt1;
- }
- // If the search has fully determined the RCC8
- if (know.first == FULL)
- {
- // Get the value
- value = know.second;
- }
- else
- {
- // Else trigger the computation
- // (which will take the optimisation phase info into account)
- calc->Compute();
- value = calc->GetValue();
- }
- // otbMsgDebugMacro(<<"RCC8GraphFilter: Leaving optimisation loop");
- }
- // If the optimisations are not activated
- else
- {
- calc->Compute();
- value = calc->GetValue();
- }
- m_Accumulator[value] += 1;
- m_Accumulator[invert[value]] += 1;
- // If the vertices are connected
- if (value > OTB_RCC8_DC)
- {
- // Add the edge to the graph.
- otbMsgDevMacro(<< "Adding edge: " << vIt1.GetIndex() << " -> " << vIt2.GetIndex() << ": " << value);
- if (value == OTB_RCC8_NTPPI)
- {
- m_EdgesPerThread[threadId][EdgePairType(vIt2.GetIndex(), vIt1.GetIndex())] = OTB_RCC8_NTPP;
- }
- else if (value == OTB_RCC8_TPPI)
- {
- m_EdgesPerThread[threadId][EdgePairType(vIt2.GetIndex(), vIt1.GetIndex())] = OTB_RCC8_TPP;
- }
- else
- {
- m_EdgesPerThread[threadId][EdgePairType(vIt1.GetIndex(), vIt2.GetIndex())] = value;
- }
- if (m_UseInverted)
- {
- m_EdgesPerThread[threadId][EdgePairType(vIt2.GetIndex(), vIt1.GetIndex())] = invert[value];
- }
- }
- }
- progress.CompletedPixel();
- progress.CompletedPixel();
- }
- }
- ++count;
- }
- otbMsgDebugMacro(<< "End thread " << threadId);
-}
-
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::AfterThreadedGenerateData()
-{
- // in order to have the same output graph whatever the number of
- // thread is, we use a map to sort the edges in lexicographical
- // order
-
- OutputGraphPointerType graph = this->GetOutput();
- EdgeMapType globalEdgeMap;
-
- // merge all edges
- for (typename EdgeMapVectorType::iterator vIt = m_EdgesPerThread.begin();
- vIt != m_EdgesPerThread.end(); ++vIt)
- {
- for (typename EdgeMapType::iterator mIt = (*vIt).begin();
- mIt != (*vIt).end(); ++mIt)
- {
- globalEdgeMap[mIt->first] = mIt->second;
- }
- }
-
- // Report edges to the graph
- for (typename EdgeMapType::iterator mIt = globalEdgeMap.begin();
- mIt != globalEdgeMap.end(); ++mIt)
- {
- graph->AddEdge(mIt->first.first, mIt->first.second, mIt->second);
- }
-}
-
-// Callback routine used by the threading library. This routine just calls
-// the ThreadedGenerateData method after setting the correct region for this
-// thread.
-
-template <class TPolygonList, class TOutputGraph>
-ITK_THREAD_RETURN_TYPE
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::ThreaderCallback(void *arg)
-{
- ThreadStruct *str;
- int threadId, threadCount;
- unsigned int total, start, stop;
-
- threadId = ((itk::MultiThreader::ThreadInfoStruct *) (arg))->ThreadID;
- threadCount = ((itk::MultiThreader::ThreadInfoStruct *) (arg))->NumberOfThreads;
- str = (ThreadStruct *) (((itk::MultiThreader::ThreadInfoStruct *) (arg))->UserData);
-
- total = str->Filter->GetOutput()->GetNumberOfVertices();
-
- if (threadId < static_cast<int>(total))
- {
-
- // Split the adjacency matrix in strip of equal dimension
- start =
- static_cast<unsigned int>(std::floor(total *
- std::sqrt(static_cast<double>(threadId) /
- static_cast<double>(threadCount)) + 0.5));
- stop =
- static_cast<unsigned int>(std::floor(total *
- std::sqrt(static_cast<double>(threadId +
- 1) / static_cast<double>(threadCount)) + 0.5));
- if (stop > total) stop = total;
-
- // For very small graphs it might occur that start = stop. In this
- // case the vertex at that index will be processed in the next strip.
- if (start != stop)
- {
- str->Filter->ThreadedGenerateData(start, stop, threadId);
- }
- }
- // else
- // {
- // otherwise don't use this thread. Sometimes the threads don't
- // break up very well and it is just as efficient to leave a
- // few threads idle.
- // }
-
- return ITK_THREAD_RETURN_VALUE;
-}
-
-template <class TPolygonList, class TOutputGraph>
-void
-PolygonListToRCC8GraphFilter<TPolygonList, TOutputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.h b/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.h
deleted file mode 100644
index b19cf4a7a31d6d30959b4fe39d193535021376f8..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.h
+++ /dev/null
@@ -1,137 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPolygonToPolygonRCC8Calculator_h
-#define otbPolygonToPolygonRCC8Calculator_h
-
-#include "itkObject.h"
-#include "otbRCC8Value.h"
-#include "otbImage.h"
-
-namespace otb
-{
-/**
- * \class PolygonToPolygonRCC8Calculator
- * \brief This class compute the RCC8 relation between the regions from two segmentation images.
- *
- * The RCC8 system comes from qualitative spatial reasoning.
- * It is a set of pairwise disjoint exhaustive relation between two closed region of space.
- * There are 8 possible relations :
- * DC: Disconnected
- * EC: Externaly connected
- * PO: Partial overlap
- * TPP: Tangential proper part
- * NTPP: Non tangential proper part
- * TPPI: Tangential proper part inverse
- * NTPPI: Non tangential proper part inverse
- * EQ: Equivalence
- *
- * The goal of this class is to determine which of these 8 relations link the two inputs regions represented
- * by the closed input path. Since this class will further be used iteratively on a possibly large set
- * of regiosn, it is optimised : the decision is managed by a decision tree.
- *
- * \ingroup OTBRCC8
- */
-template <class TInputPolygon>
-class ITK_EXPORT PolygonToPolygonRCC8Calculator : public itk::Object
-{
-public:
- /** Standard class typedefs. */
- typedef PolygonToPolygonRCC8Calculator Self;
- typedef itk::Object Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(PolygonToPolygonRCC8Calculator, Object);
- /** Types definitions for the input image. */
- typedef TInputPolygon PolygonType;
- typedef typename PolygonType::Pointer PolygonPointerType;
- typedef typename PolygonType::ConstPointer PolygonConstPointerType;
- typedef typename PolygonType::VertexListType VertexListType;
- typedef typename PolygonType::ContinuousIndexType ContinuousIndexType;
- typedef typename PolygonType::RegionType::ImageRegionType RegionType;
- typedef typename VertexListType::ConstIterator VertexListConstIteratorType;
- typedef std::vector<bool> BoolVectorType;
-
- /** RCC8 values type */
- typedef RCC8Value RCC8ValueType;
-
- /**
- * Get the RCC8 relation.
- * \return The RCC8 relation value.
- */
- RCC8ValueType GetValue(void);
-
- /** Set external knowledge to help the decision process */
- itkSetMacro(Level1APrioriKnowledge, bool);
- itkSetMacro(Level3APrioriKnowledge, bool);
- itkGetMacro(Level1APrioriKnowledge, bool);
- itkGetMacro(Level3APrioriKnowledge, bool);
-
- itkSetObjectMacro(Polygon1, PolygonType);
- itkSetObjectMacro(Polygon2, PolygonType);
- itkGetObjectMacro(Polygon1, PolygonType);
- itkGetObjectMacro(Polygon2, PolygonType);
-
- /** Main computation method */
- void Compute(void);
-
- virtual bool ComputeRelation(bool edgeEdgeBool, bool interExterBool, bool exterInterBool);
-
- virtual bool ComputeInterExter(PolygonPointerType path1, PolygonPointerType path2);
-
- virtual bool ComputeEdgeEdge(PolygonPointerType path1, PolygonPointerType path2);
-
- virtual bool ComputeInterInter(PolygonPointerType path1, PolygonPointerType path2);
-
- virtual bool RegionsIntersectionIsNull(const RegionType& region1, const RegionType& region2);
-
-protected:
- /** Constructor */
- PolygonToPolygonRCC8Calculator();
- /** Destructor */
- ~PolygonToPolygonRCC8Calculator() override {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** The RCC8 relation value */
- RCC8ValueType m_Value;
- /** Decision tree Level 1 A priori knowledge */
- bool m_Level1APrioriKnowledge;
- /** Decision tree Level 3 A priori knowledge */
- bool m_Level3APrioriKnowledge;
- /** Polygon of region 1 */
- PolygonPointerType m_Polygon1;
- /** Polygon of region 2 */
- PolygonPointerType m_Polygon2;
- /** Epsilon */
- double m_Epsilon;
-
-};
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbPolygonToPolygonRCC8Calculator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.hxx b/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.hxx
deleted file mode 100644
index bcb836fa4c5baf6e07c9a9bb782b6d90042455d9..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbPolygonToPolygonRCC8Calculator.hxx
+++ /dev/null
@@ -1,348 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPolygonToPolygonRCC8Calculator_hxx
-#define otbPolygonToPolygonRCC8Calculator_hxx
-
-#include "otbPolygonToPolygonRCC8Calculator.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template<class TInputPolygon>
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::PolygonToPolygonRCC8Calculator()
-{
- m_Value = OTB_RCC8_DC;
- m_Level1APrioriKnowledge = false;
- m_Level3APrioriKnowledge = false;
-}
-/**
- * Get the RCC8 relation.
- * \return The RCC8 relation value.
- */
-template <class TInputPolygon>
-typename PolygonToPolygonRCC8Calculator<TInputPolygon>
-::RCC8ValueType
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::GetValue(void)
-{
- return m_Value;
-}
-
-template<class TInputPolygon>
-void
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::Compute(void)
-{
- // First check if bounding regions are disjoints
- RegionType region1 = m_Polygon1->GetBoundingRegion().GetImageRegion();
- RegionType region2 = m_Polygon2->GetBoundingRegion().GetImageRegion();
-
- // If intersection is not null, we have to do the computation
- if (!RegionsIntersectionIsNull(region1, region2))
- {
-
- bool edgeEdgeBool, interExterBool, exterInterBool, interInterBool;
- /// The boolean edgeEdge is needed in each case, so it si computed
- /// now
- edgeEdgeBool = ComputeEdgeEdge(m_Polygon1, m_Polygon2);
-
- //std::cout<<"EdgeEdge: "<<edgeEdgeBool<<std::endl;
-
- if (this->GetLevel1APrioriKnowledge())
- {
- interExterBool = true;
- }
- else
- {
- /// Else it must be computed
- interExterBool = ComputeInterExter(m_Polygon1, m_Polygon2);
- }
-
- //std::cout<<"InterExter: "<<interExterBool<<std::endl;
-
- /// At this stage we can determine if the relation is of type NTPP
- if ((!interExterBool) && (!edgeEdgeBool))
- {
- m_Value = OTB_RCC8_NTPP;
- }
- else
- {
- /// If not, we must consider the intersection between exterior
- if (this->GetLevel3APrioriKnowledge())
- {
- /// If the Level3APRioriKnowledge flag is set, this boolean
- /// can be determined from the two others
- exterInterBool = true;
- }
- else
- {
- /// Else it must be computed
- exterInterBool = ComputeInterExter(m_Polygon2, m_Polygon1);
- }
-
- //std::cout<<"ExterInter: "<<exterInterBool<<std::endl;
-
- /// If it is not sufficient to compute the relation
- if (!ComputeRelation(edgeEdgeBool, interExterBool, exterInterBool))
- {
- /// Compute the last boolean
- interInterBool = ComputeInterInter(m_Polygon1, m_Polygon2);
-
- //std::cout<<"InterInter: "<<interInterBool<<std::endl;
-
- /// Which allow the full determination
- if ((interExterBool) && (edgeEdgeBool) && (exterInterBool) && (!interInterBool))
- {
- m_Value = OTB_RCC8_EC;
- }
- else
- {
- m_Value = OTB_RCC8_PO;
- }
- }
- }
- }
-}
-
-template<class TInputPolygon>
-bool
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::RegionsIntersectionIsNull(const RegionType& region1, const RegionType& region2)
-{
- for (unsigned int dim = 0; dim < RegionType::ImageDimension; ++dim)
- {
- if (region1.GetIndex()[dim] + static_cast<int>(region1.GetSize()[dim]) < region2.GetIndex()[dim])
- {
- return true;
- }
- else if (region2.GetIndex()[dim] + static_cast<int>(region2.GetSize()[dim]) < region1.GetIndex()[dim])
- {
- return true;
- }
- }
- return false;
-}
-
-template<class TInputPolygon>
-bool
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::ComputeRelation(bool edgeEdgeBool, bool interExterBool, bool exterInterBool)
-{
- // This decision process is based on a decision tree
- if ((!interExterBool) && (edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_EQ;
- return true;
- }
- else if ((!interExterBool) && (edgeEdgeBool) && (exterInterBool))
- {
- m_Value = OTB_RCC8_TPP;
- return true;
- }
- else if ((interExterBool) && (!edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_NTPPI;
- return true;
- }
- else if ((interExterBool) && (!edgeEdgeBool) && (exterInterBool))
- {
- m_Value = OTB_RCC8_DC;
- return true;
- }
- else if ((interExterBool) && (edgeEdgeBool) && (!exterInterBool))
- {
- m_Value = OTB_RCC8_TPPI;
- return true;
- }
- else
- {
- return false;
- }
-}
-
-template<class TInputPolygon>
-bool
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::ComputeInterExter(PolygonPointerType polygon1, PolygonPointerType polygon2)
-{
- bool resp = false;
- VertexListConstIteratorType it = polygon1->GetVertexList()->Begin();
- VertexListConstIteratorType it_end = polygon1->GetVertexList()->End();
-
- ContinuousIndexType current = it.Value();
- ContinuousIndexType first = current;
- bool isInside = polygon2->IsInside(current);
- bool firstIsInside = isInside;
- bool isExterior = !isInside && !polygon2->IsOnEdge(current);
-
- //std::cout<<current<<" is inside: "<<isInside<<std::endl;
- //std::cout<<current<<" is on edge: "<<polygon2->IsOnEdge(current)<<std::endl;
-
- unsigned int index = 0;
- if (isExterior)
- {
- resp = true;
- }
- ++it;
- while (!resp && it != it_end)
- {
- bool nextIsInside = polygon2->IsInside(it.Value());
-
- if (isInside && nextIsInside)
- {
- //std::cout<<current<<" is inside and "<<it.Value()<<" is inside, nb crossings: "<<polygon2->NbCrossing(current, it.Value())<<std::endl;
- resp = polygon2->NbCrossing(current, it.Value()) > 0;
- }
- current = it.Value();
- isInside = nextIsInside;
- isExterior = !isInside && !polygon2->IsOnEdge(current);
- //std::cout<<current<<" is inside: "<<isInside<<std::endl;
- //std::cout<<current<<" is on edge: "<<polygon2->IsOnEdge(current)<<std::endl;
- if (isExterior)
- {
- resp = true;
- }
-
- ++index;
- ++it;
- }
-
- if (!resp && isInside && firstIsInside)
- {
- resp = polygon2->NbCrossing(current, first) > 0;
- //std::cout<<current<<" is inside and "<<first<<" is inside, nb crossings: "<<polygon2->NbCrossing(current, first)<<std::endl;
- }
-
- return resp;
-}
-
-template<class TInputPolygon>
-bool
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::ComputeInterInter(PolygonPointerType polygon1, PolygonPointerType polygon2)
-{
- bool resp = false;
- VertexListConstIteratorType it = polygon1->GetVertexList()->Begin();
- VertexListConstIteratorType it_end = polygon1->GetVertexList()->End();
- ContinuousIndexType current = it.Value();
- ContinuousIndexType first = current;
- bool currentIsInside = polygon2->IsInside(current);
- bool firstIsInside = currentIsInside;
-
- if (currentIsInside)
- {
- resp = true;
- }
- ++it;
- while (!resp && it != it_end)
- {
- bool nextIsInside = polygon2->IsInside(it.Value());
-
- if (!currentIsInside && !nextIsInside && !polygon2->IsOnEdge(current) && !polygon2->IsOnEdge(it.Value()))
- {
- unsigned int nbCrossings = polygon2->NbCrossing(current, it.Value());
-
- resp = nbCrossings > 0;
- }
- currentIsInside = nextIsInside;
- current = it.Value();
-
- if (currentIsInside)
- {
- resp = true;
- }
- ++it;
- }
-
- if (!resp && !currentIsInside && !firstIsInside && !polygon2->IsOnEdge(current) && !polygon2->IsOnEdge(first))
- {
- unsigned int nbCrossings = polygon2->NbCrossing(current, first);
-
- resp = nbCrossings > 0;
- }
- return resp;
-}
-template<class TInputPolygon>
-bool
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::ComputeEdgeEdge(PolygonPointerType polygon1, PolygonPointerType polygon2)
-{
- bool resp = false;
- VertexListConstIteratorType it = polygon1->GetVertexList()->Begin();
- VertexListConstIteratorType it_end = polygon1->GetVertexList()->End();
-
- ContinuousIndexType current = it.Value();
- resp = polygon2->IsOnEdge(current);
- //std::cout<<"IsOnEdge: "<<current<<": "<<polygon2->IsOnEdge(current)<<std::endl;
- ContinuousIndexType first = current;
- ++it;
-
- while (!resp && it != it_end)
- {
- if (polygon2->NbTouching(current, it.Value()) > 0)
- {
- resp = true;
- //std::cout<<"NbCrossing: "<<current<<" -> "<<it.Value()<<": "<<polygon2->NbCrossing(current, it.Value())<<std::endl;
- }
- if (polygon2->NbCrossing(current, it.Value()) > 0)
- {
- resp = true;
- //std::cout<<"NbTouching: "<<current<<" -> "<<it.Value()<<": "<<polygon2->NbTouching(current, it.Value())<<std::endl;
- }
- current = it.Value();
-
- if (polygon2->IsOnEdge(current))
- {
- resp = true;
- //std::cout<<"IsOnEdge: "<<current<<": "<<polygon2->IsOnEdge(current)<<std::endl;
- }
- ++it;
- }
- if (!resp && polygon2->NbTouching(current, first) > 0)
- {
- resp = true;
- //std::cout<<"NbCrossing: "<<current<<" -> "<<first<<": "<<polygon2->NbCrossing(current, first)<<std::endl;
- }
- if (polygon2->NbCrossing(current, first) > 0)
- {
- resp = true;
- //std::cout<<"NbTouching: "<<current<<" -> "<<first<<": "<<polygon2->NbTouching(current, first)<<std::endl;
- }
-
- return resp;
-}
-/**
- * PrintSelf method
- */
-template<class TInputPolygon>
-void
-PolygonToPolygonRCC8Calculator<TInputPolygon>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // end namespace otb
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8Edge.h b/Modules/OBIA/RCC8/include/otbRCC8Edge.h
deleted file mode 100644
index e85d8d3c755e5bfb363551519bde0aafaab2ffbd..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8Edge.h
+++ /dev/null
@@ -1,68 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8Edge_h
-#define otbRCC8Edge_h
-
-#include "itkDataObject.h"
-#include "itkObjectFactory.h"
-#include "otbRCC8Value.h"
-
-namespace otb
-{
-/** \class RCC8Edge
- * \brief Base class to represent an edge in a RCC8 Graph.
- *
- * \sa RCC8Graph, RCC8VertexBase
- *
- * \ingroup OTBRCC8
- */
-class ITK_EXPORT RCC8Edge : public itk::DataObject
-{
-public:
- /** Standard class typedefs */
- typedef RCC8Edge Self;
- typedef itk::DataObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8Edge, DataObject);
- /** RCC8 values typedef */
- typedef RCC8Value RCC8ValueType;
- /** RCC8 relation value accessors */
- itkGetMacro(Value, RCC8ValueType);
- itkSetMacro(Value, RCC8ValueType);
-
-protected:
- /** Constructor */
- RCC8Edge();
- /** Desctructor */
- ~RCC8Edge() override {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** The RCC8 value */
- RCC8ValueType m_Value;
-};
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.h b/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.h
deleted file mode 100644
index c7096be92632966c1df05f1c522c0c68f6baa411..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.h
+++ /dev/null
@@ -1,138 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8EdgeIterator_h
-#define otbRCC8EdgeIterator_h
-
-#include "otbRCC8Graph.h"
-
-namespace otb
-{
-/**
- * \class RCC8EdgeIterator
- * \brief Iterates on the graph edges.
- *
- * \ingroup OTBRCC8
- */
-template <class TGraph>
-class ITK_EXPORT RCC8EdgeIterator
-{
-public:
- /** self typedef */
- typedef RCC8EdgeIterator Self;
-
- /** Graph typedef */
- typedef TGraph GraphType;
- typedef typename GraphType::InternalGraphType InternalGraphType;
- typedef typename GraphType::Pointer GraphPointerType;
- typedef typename GraphType::EdgePointerType EdgePointerType;
- typedef typename GraphType::VertexPointerType VertexPointerType;
- typedef typename GraphType::VertexDescriptorType VertexDescriptorType;
- typedef typename GraphType::RCC8ValueType RCC8ValueType;
- /** typedef of the internal iterator */
- typedef typename boost::graph_traits<InternalGraphType>::edge_iterator InternalIteratorType;
- /** Typedef of the index map */
- typedef typename boost::property_map<InternalGraphType, boost::vertex_index_t>::type IndexMapType;
-
- /** Constructor */
- RCC8EdgeIterator();
- /** Copy constructor */
- RCC8EdgeIterator(const Self &iter);
- /** Constructor with input graph */
- RCC8EdgeIterator(TGraph * graph);
- /**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
- RCC8ValueType GetValue(void);
- /**
- * Return the source vertex of the current edge.
- * \return The source edge.
- */
- VertexPointerType GetSourceVertex(void);
- /**
- * Return the target vertex of the current edge.
- * \return The target vertex.
- */
- VertexPointerType GetTargetVertex(void);
- /**
- * Return the source vertex index of the current edge.
- * \return The source vertex index.
- */
- VertexDescriptorType GetSourceIndex(void);
- /**
- * Return the target vertex index of the current edge.
- * \return The target vertex index.
- */
- VertexDescriptorType GetTargetIndex(void);
-
- /**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
- bool IsAtEnd(void);
- /**
- * Go to the beginning.
- */
- void GoToBegin(void);
- /**
- * Increment.
- */
- Self& operator ++();
- /**
- * Decrement.
- */
- Self& operator --();
- /**
- * Add
- */
- Self& operator +(int i);
-
- /**
- * Remove
- */
- Self& operator -(int i);
- /**
- * Difference comparison operator.
- */
- bool operator !=(const Self& it);
- /**
- * Equality comparison operator.
- */
- bool operator ==(const Self& it);
- /**
- * Instantiation operator.
- */
- Self& operator =(const Self& it);
-private:
- // End
- InternalIteratorType m_End;
- // Internal iterator.
- InternalIteratorType m_Iter;
- // Input graph pointer
- GraphPointerType m_Graph;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8EdgeIterator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.hxx b/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.hxx
deleted file mode 100644
index 43989016883e56e95e053e6e547d5b78e0e6ce99..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8EdgeIterator.hxx
+++ /dev/null
@@ -1,221 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8EdgeIterator_hxx
-#define otbRCC8EdgeIterator_hxx
-
-#include "otbRCC8EdgeIterator.h"
-
-namespace otb
-{
-/** Constructor */
-template <class TGraph>
-RCC8EdgeIterator<TGraph>
-::RCC8EdgeIterator()
-{
- m_Graph = GraphType::New();
- boost::tuples::tie(m_Iter, m_End) = edges(*m_Graph->GetGraph());
-}
-/**
- * Copy operator.
- */
-template <class TGraph>
-RCC8EdgeIterator<TGraph>
-::RCC8EdgeIterator(const Self& iter)
-{
- m_Iter = iter.m_Iter;
- m_Graph = iter.m_Graph;
- m_End = iter.m_End;
-}
-/**
- *Constructor with input graph
- */
-template <class TGraph>
-RCC8EdgeIterator<TGraph>
-::RCC8EdgeIterator(TGraph * graph)
-{
- m_Graph = graph;
- boost::tuples::tie(m_Iter, m_End) = edges(*m_Graph->GetGraph());
-}
-/**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::RCC8ValueType
-RCC8EdgeIterator<TGraph>
-::GetValue(void)
-{
- return (*m_Graph->GetGraph())[*m_Iter]->GetValue();
-}
-/**
- * Return the source vertex of the current edge.
- * \return The source edge.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::VertexPointerType
-RCC8EdgeIterator<TGraph>
-::GetSourceVertex(void)
-{
- return (*m_Graph->GetGraph())[source(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return the target vertex of the current edge.
- * \return The target vertex.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::VertexPointerType
-RCC8EdgeIterator<TGraph>
-::GetTargetVertex(void)
-{
- return (*m_Graph->GetGraph())[target(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return the source vertex index of the current edge.
- * \return The source vertex index.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::VertexDescriptorType
-RCC8EdgeIterator<TGraph>
-::GetSourceIndex(void)
-{
- IndexMapType index = get(boost::vertex_index, (*m_Graph->GetGraph()));
- return index[source(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return the target vertex index of the current edge.
- * \return The target vertex index.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::VertexDescriptorType
-RCC8EdgeIterator<TGraph>
-::GetTargetIndex(void)
-{
- IndexMapType index = get(boost::vertex_index, (*m_Graph->GetGraph()));
- return index[target(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
-template <class TGraph>
-bool
-RCC8EdgeIterator<TGraph>
-::IsAtEnd(void)
-{
- return (m_Iter == m_End);
-}
-/**
- * Go to the beginning.
- */
-template <class TGraph>
-void
-RCC8EdgeIterator<TGraph>
-::GoToBegin(void)
-{
- boost::tuples::tie(m_Iter, m_End) = edges(*m_Graph->GetGraph());
-}
-/**
- * Increment.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::Self&
-RCC8EdgeIterator<TGraph>
-::operator++ ()
- {
- ++m_Iter;
- return *this;
- }
-/**
- * Decrement.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::Self&
-RCC8EdgeIterator<TGraph>
-::operator-- ()
- {
- --m_Iter;
- return *this;
- }
-/**
- * Add
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::Self&
-RCC8EdgeIterator<TGraph>
-::operator + (int i)
- {
- m_Iter = m_Iter + i;
- return *this;
- }
-/**
- * Remove
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::Self&
-RCC8EdgeIterator<TGraph>
-::operator - (int i)
- {
- m_Iter = m_Iter - i;
- return *this;
- }
-/**
- * Difference comparison operator.
- */
-template <class TGraph>
-bool
-RCC8EdgeIterator<TGraph>
-::operator != (const Self &iter)
- {
- return (m_Iter != iter.m_Iter);
- }
-/**
- * Equality comparison operator.
- */
-template <class TGraph>
-bool
-RCC8EdgeIterator<TGraph>
-::operator == (const Self &iter)
- {
- return (m_Iter == iter.m_Iter);
- }
-/**
- * Instantiation operator.
- */
-template <class TGraph>
-typename RCC8EdgeIterator<TGraph>
-::Self&
-RCC8EdgeIterator<TGraph>
-::operator = (const Self &iter)
- {
- m_Iter = iter.m_Iter;
- return *this;
- }
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8Graph.h b/Modules/OBIA/RCC8/include/otbRCC8Graph.h
deleted file mode 100644
index 9caa3ef59626a55d833fda5aaebebd1b09a28f6e..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8Graph.h
+++ /dev/null
@@ -1,152 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8Graph_h
-#define otbRCC8Graph_h
-
-#include "otbRCC8Edge.h"
-
-//fix compilation in VS7.1 for boost 1.42
-//similar to the fix in Monteverdi
-#ifndef BOOST_NO_0X_HDR_INITIALIZER_LIST
-#define BOOST_NO_0X_HDR_INITIALIZER_LIST
-#endif
-
-#include "otb_boost_graph_header.h"
-
-#include "otbImage.h"
-#include "otbImageList.h"
-
-namespace otb
-{
-/**
- * \class RCC8Graph
- * \brief This class is a data structure designed to store RCC8 Graph
- * computed from a pyramidal segmentation.
- *
- * A batch of boost operation has been embedded in order to provide
- * basic functionality such as adding a new edge, or retrieving the
- * number of vertices. A method is also provided to retrieve the boost
- * graph object, in case more advanced processing is required. One
- * should remember that if a peculiar operation is needed for some
- * applications, one should provide a patch for this class including
- * the new functionnalities, for consistency reason.
- *
- * \ingroup OTBRCC8
- */
-template <class TVertex>
-class ITK_EXPORT RCC8Graph :
- public itk::DataObject
-{
-public:
- /** Standard class typedefs. */
- typedef RCC8Graph Self;
- typedef itk::DataObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8Graph, itk::DataObject);
- /** Vertex typedef */
- typedef TVertex VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- /** Edge typedef */
- typedef RCC8Edge EdgeType;
- typedef typename EdgeType::Pointer EdgePointerType;
- typedef typename EdgeType::RCC8ValueType RCC8ValueType;
- /** Typedef for the boost graph representation */
- typedef boost::adjacency_list
- <boost::vecS, boost::vecS, boost::bidirectionalS,
- VertexPointerType, EdgePointerType> InternalGraphType;
- /** Edges and vertices descriptors typedefs (boost objects)*/
- typedef typename InternalGraphType::vertex_descriptor VertexDescriptorType;
- typedef typename InternalGraphType::edge_descriptor EdgeDescriptorType;
-
- /** Getters and Setters for the number of vertices */
- itkSetMacro(NumberOfVertices, unsigned int);
- itkGetConstReferenceMacro(NumberOfVertices, unsigned int);
-
- /**
- * Return the internal boost graph object.
- * \return The internal boost graph object
- */
- InternalGraphType * GetGraph(void)
- {
- return &m_Graph;
- }
- /**
- * Since the number of vertices is mandatory to instantiate the
- * internal boost representation, the build method has to be called
- * once this parameter is set.
- */
- void Build(void);
- /**
- * Set a vertex.
- * \param index The index of the vertex in the graph.
- * \param vertex The vertex to set.
- */
- void SetVertex(unsigned int index, VertexPointerType vertex);
- /**
- * Get a vertex.
- * \param index The index of the vertex in the graph
- * \return The vertex.
- */
- VertexPointerType GetVertex(unsigned int index);
- /**
- * Add an edge in the graph.
- * \param index1 The index of the source vertex.
- * \param index2 The index of the target vertex.
- * \param r The RCC8 value.
- */
- void AddEdge(unsigned int index1, unsigned int index2, RCC8ValueType r);
- /**
- * Get number of edges
- * /return The number of edges.
- */
- unsigned int GetNumberOfEdges(void);
-
-protected:
- /** Constructor */
- RCC8Graph();
- /** Destructor */
- ~RCC8Graph() override {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /**
- * Initialize a range of vertex.
- * \param num The index of the last vertices to initialize.
- */
- void InitializeGraph(unsigned int num);
-
-private:
-
- /** Defines the number of vertices (ie total number of segmentation regions)*/
- unsigned int m_NumberOfVertices;
- /** Internal representation using the boost graph library */
- InternalGraphType m_Graph;
-};
-} // end namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8Graph.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8Graph.hxx b/Modules/OBIA/RCC8/include/otbRCC8Graph.hxx
deleted file mode 100644
index f429442c2dd820447bc547283af733bf68f448b4..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8Graph.hxx
+++ /dev/null
@@ -1,135 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8Graph_hxx
-#define otbRCC8Graph_hxx
-
-#include "otbRCC8Graph.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TVertex>
-RCC8Graph<TVertex>
-::RCC8Graph()
-{
- m_NumberOfVertices = 0;
-}
-/**
- * since the number of vertices is mandatory to instantiate the
- * internal boost representation, the build method has to be called
- * once this parameter is set.
- */
-template <class TVertex>
-void
-RCC8Graph<TVertex>
-::Build(void)
-{
- this->InitializeGraph(m_NumberOfVertices - 1);
-}
-/**
- * Initialize a range of vertex.
- * \param num The index of the last vertices to initialize.
- */
-template <class TVertex>
-void
-RCC8Graph<TVertex>
-::InitializeGraph(unsigned int num)
-{
- for (unsigned int i = boost::num_vertices(m_Graph); i <= num; ++i)
- {
- VertexDescriptorType id = boost::add_vertex(m_Graph);
- VertexPointerType vertex = VertexType::New();
- m_Graph[id] = vertex;
- }
-}
-/**
- * Set a vertex.
- * \param index The index of the vertex in the graph.
- * \param vertex The vertex to set.
- */
-template<class TVertex>
-void
-RCC8Graph<TVertex>
-::SetVertex(unsigned int index, VertexPointerType vertex)
-{
- if (index >= m_NumberOfVertices)
- {
- this->InitializeGraph(index);
- m_NumberOfVertices = index + 1;
- }
- VertexDescriptorType v = *boost::vertices(m_Graph).first;
- m_Graph[v + index] = vertex;
-}
-/**
- * Get a vertex.
- * \param index The index of the vertex in the graph
- * \return The vertex.
- */
-template <class TVertex>
-typename RCC8Graph<TVertex>
-::VertexPointerType
-RCC8Graph<TVertex>
-::GetVertex(unsigned int index)
-{
- VertexDescriptorType v = *boost::vertices(m_Graph).first;
- return m_Graph[v + index];
-}
-/**
- * Add an edge in the graph.
- * \param index1 The index of the source vertex.
- * \param index2 The index of the target vertex.
- * \param r The rcc8 value associated to the edge.
- */
-template <class TVertex>
-void
-RCC8Graph<TVertex>
-::AddEdge(unsigned int index1, unsigned int index2, RCC8ValueType r)
-{
- EdgeDescriptorType e = boost::add_edge(index1, index2, m_Graph).first;
- EdgeType::Pointer edge = EdgeType::New();
- edge->SetValue(r);
- m_Graph[e] = edge;
-}
-/**
- * Get number of edges
- * /return The number of edges.
- */
-template <class TVertex>
-unsigned int
-RCC8Graph<TVertex>
-::GetNumberOfEdges(void)
-{
- return num_edges(m_Graph);
-}
-/**
- * PrintSelf method
- */
-template <class TVertex>
-void
-RCC8Graph<TVertex>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.h b/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.h
deleted file mode 100644
index 0811898a0c6f4f3cbac0d80d93acb28481578bcd..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.h
+++ /dev/null
@@ -1,122 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphFileReader_h
-#define otbRCC8GraphFileReader_h
-
-#include "otbRCC8GraphSource.h"
-#include "itkMacro.h"
-#include <string>
-
-namespace otb
-{
-/** \class RCC8GraphFileReaderException
- * \brief Base exception class for IO problems during reading.
- *
- * \ingroup OTBRCC8
- */
-class ITK_EXPORT RCC8GraphFileReaderException
- : public itk::ExceptionObject
-{
-public:
- /** Run-time information. */
- itkTypeMacro(RCC8GraphFileReaderException, ExceptionObject);
-
- /** Constructor. */
- RCC8GraphFileReaderException(const char *file, unsigned int line,
- const char* message = "Error in IO",
- const char* loc = "Unknown") :
- ExceptionObject(file, line, message, loc) {}
- /** Constructor. */
- RCC8GraphFileReaderException(const std::string & file, unsigned int line,
- const char* message = "Error in IO",
- const char* loc = "Unknown") :
- ExceptionObject(file, line, message, loc) {}
-};
-/**
- * \class RCC8GraphFileReader
- * \brief This class reads a RCC8 graph from a .dot file (graphviz format).
- *
- * The parsing algorithm reads the lines from the file, deciding if the line is
- * a vertex or edge line. It then call the correct parse method between ParseEdge
- * and ParseVertex. The ParseVertex use builds an AttributesMap and pass it to a new
- * vertex.
- *
- * \sa RCC8GraphFileWriter
- * \sa RCC8Graph
- *
- * \ingroup OTBRCC8
- */
-template <class TOutputGraph>
-class ITK_EXPORT RCC8GraphFileReader : public RCC8GraphSource<TOutputGraph>
-{
-public:
- /** Standards typedef */
- typedef RCC8GraphFileReader Self;
- typedef RCC8GraphSource<TOutputGraph> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Creation through the object factory */
- itkNewMacro(Self);
- /** Runtime type information */
- itkTypeMacro(RCC8GraphFileReader, RCC8GraphSource);
- /** Output related typedefs */
- typedef TOutputGraph OutputGraphType;
- typedef typename Superclass::OutputGraphPointerType OutputGraphPointerType;
- typedef typename OutputGraphType::VertexType VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- typedef typename OutputGraphType::RCC8ValueType RCC8ValueType;
-
- /** Set the filename */
- itkSetStringMacro(FileName);
- /** Get the filename */
- itkGetStringMacro(FileName);
-
-protected:
- /** Constructor */
- RCC8GraphFileReader();
- /** Destructor */
- ~RCC8GraphFileReader() override;
- /** Main computation method */
- void GenerateData() override;
- /**
- * Parse edge information from a given line.
- * \param line The line to parse.
- */
- void ParseEdge(const std::string& line);
- /**
- * Parse vertex information from a given line.
- * \param line The line to parse.
- */
- void ParseVertex(const std::string& line);
-
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** File name */
- std::string m_FileName;
-};
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8GraphFileReader.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.hxx b/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.hxx
deleted file mode 100644
index 2bab0d9fc2e0ef0ce2398a2fcadff43e9426a21d..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphFileReader.hxx
+++ /dev/null
@@ -1,159 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphFileReader_hxx
-#define otbRCC8GraphFileReader_hxx
-
-#include "otbRCC8GraphFileReader.h"
-#include "otbRCC8VertexIterator.h"
-#include "otbMacro.h"
-#include <fstream>
-#include <iostream>
-#include <string>
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TOutputGraph>
-RCC8GraphFileReader<TOutputGraph>
-::RCC8GraphFileReader()
-{
- m_FileName = "";
-}
-/**
- * Destructor
- */
-template <class TOutputGraph>
-RCC8GraphFileReader<TOutputGraph>
-::~RCC8GraphFileReader()
-{
-}
-/**
- * Parse edge information from a given line.
- * \param line The line to parse.
- */
-template <class TOutputGraph>
-void
-RCC8GraphFileReader<TOutputGraph>
-::ParseEdge(const std::string& line)
-{
- typename std::string::size_type pos1 = line.find_first_of(" ", 0);
- typename std::string::size_type pos2 = line.find_first_of(" ", pos1 + 1);
- typename std::string::size_type pos3 = line.find_first_of(" ", pos2 + 1);
- unsigned int source = atoi(line.substr(0, pos1).c_str());
- unsigned int target = atoi(line.substr(pos2 + 1, pos3 - pos2 - 1).c_str());
- typename std::string::size_type pos4 = line.find_first_of("\"", 0);
- typename std::string::size_type pos5 = line.find_first_of("\" ", pos4 + 1);
- RCC8ValueType value = static_cast<RCC8ValueType>(atoi(line.substr(pos4 + 1, pos5 - pos4 - 1).c_str()));
- otbMsgDevMacro(<< "RCC8GraphFileReader: Edge line parsed: " << source << " -> "
- << target << " " << value);
- this->GetOutput()->AddEdge(source, target, value);
-}
-/**
- * Parse vertex information from a given line.
- * \param line The line to parse.
- */
-template <class TOutputGraph>
-void
-RCC8GraphFileReader<TOutputGraph>
-::ParseVertex(const std::string& line)
-{
- typename VertexType::AttributesMapType attr;
- typename std::string::size_type pos = line.find_first_of(" ", 0);
- unsigned int index = atoi(line.substr(0, pos).c_str());
- otbMsgDevMacro(<< "RCC8GraphFileReader: Vertex index: " << index);
- typename std::string::size_type midPos, nextPos;
-
- midPos = line.find_first_of("\"", pos + 2);
- nextPos = line.find_first_of("\"", midPos + 1);
- std::string key, value;
- while ((midPos != std::string::npos) && (nextPos != std::string::npos))
- {
- key = line.substr(pos + 2, midPos - pos - 3);
- value = line.substr(midPos + 1, nextPos - midPos - 1);
- attr[key] = value;
- otbMsgDevMacro(<< "RCC8GraphFileReader: Vertex attribute: " << key << " " << value);
- pos = nextPos;
- midPos = line.find_first_of("\"", pos + 2);
- nextPos = line.find_first_of("\"", midPos + 1);
- }
- typename VertexType::Pointer vertex = VertexType::New();
- vertex->SetAttributesMap(attr);
- this->GetOutput()->SetVertex(index, vertex);
-}
-
-/**
- * Generate data method
- */
-template <class TOutputGraph>
-void
-RCC8GraphFileReader<TOutputGraph>
-::GenerateData()
-{
- std::ifstream fin;
- std::string line;
-
- // open file input stream
- fin.open(m_FileName);
-
- // Test if the file has been opened correctly
- if (!fin)
- {
- RCC8GraphFileReaderException e(__FILE__, __LINE__);
- std::ostringstream msg;
- msg << " Could not create IO object for file ";
- msg << m_FileName << "." << std::endl;
- e.SetDescription(msg.str());
- throw e;
- return;
- }
-
- // if so, parse it
- while (!fin.eof())
- {
- std::getline(fin, line);
- if (line.find("->") != std::string::npos)
- {
- // edge line
- this->ParseEdge(line);
- }
- else if (line.find("[") != std::string::npos)
- {
- // vertex line
- this->ParseVertex(line);
- }
- }
- fin.close();
-}
-/**
- * PrintSelf method
- */
-template <class TInputGraph>
-void
-RCC8GraphFileReader<TInputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // end namespace otb
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.h b/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.h
deleted file mode 100644
index 4e4284dde3abfd86f2f5dc5a5e996c98d82c924c..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.h
+++ /dev/null
@@ -1,160 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphFileWriter_h
-#define otbRCC8GraphFileWriter_h
-
-#include "itkProcessObject.h"
-#include "itkMacro.h"
-#include "otbRCC8Graph.h"
-#include <string>
-
-namespace otb
-{
-/** \class RCC8GraphFileWriterException
- * \brief Base exception class for IO problems during writing.
- *
- * \ingroup OTBRCC8
- */
-class ITK_EXPORT RCC8GraphFileWriterException
- : public itk::ExceptionObject
-{
-public:
- /** Run-time information. */
- itkTypeMacro(RCC8GraphFileWriterException, ExceptionObject);
-
- /** Constructor. */
- RCC8GraphFileWriterException(const char *file, unsigned int line,
- const char* message = "Error in IO",
- const char* loc = "Unknown") :
- ExceptionObject(file, line, message, loc) {}
- /** Constructor. */
- RCC8GraphFileWriterException(const std::string & file, unsigned int line,
- const char* message = "Error in IO",
- const char* loc = "Unknown") :
- ExceptionObject(file, line, message, loc) {}
-};
-/**
- * \class RCC8GraphFileWriter
- * \brief This class writes a RCC8 Graph to a dot file (graphviz file format).
- *
- * The writer first loops on the vertices of the graph, getting the property map
- * from each vertex and printing it in a line.
- *
- * It then iterates on the edges of the graphs, printing source index, target index,
- * and RCC8 value in a line for each of them.
- *
- * \sa RCC8GraphFileReader
- * \sa RCC8Graph
- *
- * \ingroup OTBRCC8
- */
-template <class TInputGraph>
-class ITK_EXPORT RCC8GraphFileWriter
- : public itk::ProcessObject
-{
-public:
- /** Standards typedefs */
- typedef RCC8GraphFileWriter Self;
- typedef itk::ProcessObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8GraphFileWriter, ProcessObject);
- /** Typedefs for the output graph type */
- typedef TInputGraph InputGraphType;
- typedef typename InputGraphType::Pointer InputGraphPointerType;
- typedef typename InputGraphType::VertexType VertexType;
- typedef typename VertexType::Pointer VertexPointerType;
- typedef typename InputGraphType::VertexDescriptorType VertexDescriptorType;
- typedef typename InputGraphType::RCC8ValueType RCC8ValueType;
- typedef typename VertexType::AttributesMapType AttributesMapType;
- typedef typename AttributesMapType::iterator IteratorType;
-
- /** Set the filename */
- itkSetStringMacro(FileName);
- /** Get the filename */
- itkGetStringMacro(FileName);
-
- using Superclass::SetInput;
- /**
- * Set the input graph.
- * \param inputGraph The graph to write.
- */
- virtual void SetInput(const InputGraphType* inputGraph);
- /**
- * Get the input graph.
- * \return The input graph pointer.
- */
- virtual InputGraphPointerType GetInput();
- /**
- * Update method.
- */
- void Update(void) override;
-
-protected:
- /** Constructor */
- RCC8GraphFileWriter();
- /** Destructor */
- ~RCC8GraphFileWriter() override;
- /**
- * Main computation method.
- */
- void GenerateData(void) override;
- /**
- * Write Method.
- * Performs checkings and invoke GenerateData().
- */
- virtual void Write(void);
- /**
- * Write an edge to file.
- * \param of The output file stream.
- * \param source The index of the source vertex.
- * \param target The index of the target vertex.
- * \param value The value of the edge.
- */
- void WriteEdge(std::ofstream& of, VertexDescriptorType source,
- VertexDescriptorType target, RCC8ValueType value);
- /**
- * Write a vertex to file.
- * \param of The output file stream.
- * \param index The index of the edge to write.
- * \param vertex The pointer to the vertex object.
- */
- void WriteVertex(std::ofstream& of, VertexDescriptorType index,
- VertexPointerType vertex);
- /**
- * PrintSelf method
- */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** Filename of the graph file to write */
- std::string m_FileName;
-};
-} // namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8GraphFileWriter.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.hxx b/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.hxx
deleted file mode 100644
index c864a7c47b9ee4b17f187ad5d0b7059c43cc575a..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphFileWriter.hxx
+++ /dev/null
@@ -1,236 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphFileWriter_hxx
-#define otbRCC8GraphFileWriter_hxx
-
-#include "otbRCC8GraphFileWriter.h"
-#include "otbRCC8VertexIterator.h"
-#include "otbRCC8EdgeIterator.h"
-#include "otbMacro.h"
-#include <fstream>
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TInputGraph>
-RCC8GraphFileWriter<TInputGraph>
-::RCC8GraphFileWriter()
-{
- this->SetNumberOfRequiredInputs(1);
- m_FileName = "";
-}
-/**
- * Destructor
- */
-template <class TInputGraph>
-RCC8GraphFileWriter<TInputGraph>
-::~RCC8GraphFileWriter()
-{
-}
-/**
- * Set the input graph.
- * \param graph The graph to write.
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::SetInput(const InputGraphType * graph)
-{
- this->itk::ProcessObject::SetNthInput(0, const_cast<TInputGraph *>(graph));
-}
-/**
- * Get the input graph.
- * \return The input graph pointer.
- */
-template <class TInputGraph>
-typename RCC8GraphFileWriter<TInputGraph>
-::InputGraphPointerType
-RCC8GraphFileWriter<TInputGraph>
-::GetInput(void)
-{
- return static_cast<TInputGraph*>(this->itk::ProcessObject::GetInput(0));
-}
-/**
- * Update method.
- * (Call the Write() method).
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::Update(void)
-{
- this->Write();
-}
-/**
- * Write Method.
- * Performs checkings and invoke GenerateData().
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::Write(void)
-{
- InputGraphType * input = this->GetInput();
-
- itkDebugMacro(<< "Writing a RCC8Graph file");
-
- // Make sure input is available
- if (input == nullptr)
- {
- itkExceptionMacro(<< "No input to writer!");
- }
-
- // Make sure that we can write the file given the name
- //
- if (m_FileName == "")
- {
- itkExceptionMacro(<< "No filename was specified");
- }
-
- // Pipeline updating sequence
- input->UpdateOutputInformation();
- input->PropagateRequestedRegion();
- input->UpdateOutputData();
- // GenerateData (actually write file)
- this->GenerateData();
-}
-/**
- * Main computation method.
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::GenerateData()
-{
- otbMsgDevMacro(<< "RCC8GraphFileWriter: GenerateData call");
- // input graph pointer
- InputGraphPointerType input = this->GetInput();
-
- // iterators typedefs
- typedef otb::RCC8VertexIterator<InputGraphType> VertexIteratorType;
- typedef otb::RCC8EdgeIterator<InputGraphType> EdgeIteratorType;
-
- // Output file stream
- std::ofstream out;
-
- // open the outputfile
- out.open(m_FileName, std::ios::out);
-
- // Test if the file has been opened correctly
- if (!out)
- {
- RCC8GraphFileWriterException e(__FILE__, __LINE__);
- std::ostringstream msg;
- msg << " Could not create IO object for file ";
- msg << m_FileName << "." << std::endl;
- e.SetDescription(msg.str());
- throw e;
- return;
- }
-
- // Start writing the graph to file
- out << "digraph G {" << std::endl;
-
- // For each vertex in the graph
- VertexIteratorType vIt(input);
- for (vIt.GoToBegin(); !vIt.IsAtEnd(); ++vIt)
- {
- this->WriteVertex(out, vIt.GetIndex(), vIt.Get());
- }
-
- // For each edge in the graph
- EdgeIteratorType eIt(input);
- for (eIt.GoToBegin(); !eIt.IsAtEnd(); ++eIt)
- {
- this->WriteEdge(out, eIt.GetSourceIndex(),
- eIt.GetTargetIndex(),
- eIt.GetValue());
- }
-
- // Ends the graph writing
- out << "}" << std::endl;
-
- // Close the file
- out.close();
-}
-/**
- * Write an edge to file.
- * \param of The output file stream.
- * \param source The index of the source vertex.
- * \param target The index of the target vertex.
- * \param value The value of the edge.
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::WriteEdge(std::ofstream& of, VertexDescriptorType source,
- VertexDescriptorType target, RCC8ValueType value)
-{
- otbMsgDevMacro(<< "RCC8GraphFileWriter: WriteEdge call: " << source << " " << target << " " << value);
- of << source << " -> " << target << " ";
- of << "[Value=\"" << value << "\"];";
- of << std::endl;
-}
-/**
- * Write a vertex to file.
- * \param of The output file stream.
- * \param index The index of the edge to write.
- * \param vertex The pointer to the vertex object.
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::WriteVertex(std::ofstream& of, VertexDescriptorType index,
- VertexPointerType vertex)
-{
- AttributesMapType attr = vertex->GetAttributesMap();
- otbMsgDevMacro(<< "RCC8GraphFileWriter: WriteVertex call: " << index);
- of << index << " [";
- IteratorType it = attr.begin();
- while (it != attr.end())
- {
- of << (*it).first << "=\"";
- of << (*it).second << "\"";
- ++it;
- if (it == attr.end())
- {
- of << "];" << std::endl;
- }
- else
- {
- of << ",";
- }
- }
-}
-/**
- * PrintSelf method
- */
-template <class TInputGraph>
-void
-RCC8GraphFileWriter<TInputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphSource.h b/Modules/OBIA/RCC8/include/otbRCC8GraphSource.h
deleted file mode 100644
index 2a893e4d6c653c67094e26ef0999723bc278878a..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphSource.h
+++ /dev/null
@@ -1,73 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphSource_h
-#define otbRCC8GraphSource_h
-
-#include "itkProcessObject.h"
-
-namespace otb
-{
-/** \class RCC8GraphSource
- * \brief Base class for all the filters producing an otbRCC8Graph
- * \ingroup DataSources
- *
- * \ingroup OTBRCC8
- */
-template <class TOutputGraph>
-class ITK_EXPORT RCC8GraphSource
- : public itk::ProcessObject
-{
-public:
- /** Standard typedefs */
- typedef RCC8GraphSource Self;
- typedef itk::ProcessObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Type macro */
- itkNewMacro(Self);
- /** Creation through object factory macro */
- itkTypeMacro(RCC8GraphSource, itk::ProcessObject);
- /** Data object pointer type */
- typedef itk::DataObject::Pointer DataObjectPointer;
- /** Template parameter typedef*/
- typedef TOutputGraph OutputGraphType;
- typedef typename OutputGraphType::Pointer OutputGraphPointerType;
- /** Overriding of the GetOutput() method */
- virtual OutputGraphType * GetOutput(void);
-
-protected:
- /** Constructor */
- RCC8GraphSource();
- /** Destructor */
- ~RCC8GraphSource() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- RCC8GraphSource(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8GraphSource.hxx"
-#endif
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8GraphSource.hxx b/Modules/OBIA/RCC8/include/otbRCC8GraphSource.hxx
deleted file mode 100644
index ce8d6b707213701de9078dc906c0d4ecedef81bc..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8GraphSource.hxx
+++ /dev/null
@@ -1,64 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8GraphSource_hxx
-#define otbRCC8GraphSource_hxx
-
-#include "otbRCC8GraphSource.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TOutputGraph>
-RCC8GraphSource<TOutputGraph>
-::RCC8GraphSource()
-{
- this->Superclass::SetNumberOfRequiredOutputs(1);
- this->Superclass::SetNthOutput(0, TOutputGraph::New().GetPointer());
-}
-/**
- * Get the output Graph
- * \return The output graph produced.
- */
-template <class TOutputGraph>
-typename RCC8GraphSource<TOutputGraph>::OutputGraphType *
-RCC8GraphSource<TOutputGraph>
-::GetOutput(void)
-{
- if (this->GetNumberOfOutputs() < 1)
- {
- return nullptr;
- }
- return static_cast<OutputGraphType *> (this->ProcessObject::GetOutput(0));
-}
-/**
- * PrintSelf Method
- */
-template<class TOutputGraph>
-void
-RCC8GraphSource<TOutputGraph>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.h b/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.h
deleted file mode 100644
index 8c3242ed14651805c7eee908bb8edb18a5362ca4..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.h
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8InEdgeIterator_h
-#define otbRCC8InEdgeIterator_h
-
-#include "otbRCC8Graph.h"
-
-namespace otb
-{
-/**
- * \class RCC8InEdgeIterator
- * \brief Iterates on the graph in edges from a vertex.
- *
- * \ingroup OTBRCC8
- */
-template <class TGraph>
-class ITK_EXPORT RCC8InEdgeIterator
-{
-public:
- /** self typedef */
- typedef RCC8InEdgeIterator Self;
-
- /** Graph typedef */
- typedef TGraph GraphType;
- typedef typename GraphType::InternalGraphType InternalGraphType;
- typedef typename GraphType::Pointer GraphPointerType;
- typedef typename GraphType::EdgePointerType EdgePointerType;
- typedef typename GraphType::VertexPointerType VertexPointerType;
- typedef typename GraphType::VertexDescriptorType VertexDescriptorType;
- typedef typename GraphType::RCC8ValueType RCC8ValueType;
- /** typedef of the internal iterator */
- typedef typename boost::graph_traits<InternalGraphType>::in_edge_iterator InternalIteratorType;
- /** Typedef of the index map */
- typedef typename boost::property_map<InternalGraphType, boost::vertex_index_t>::type IndexMapType;
-
- /** Constructor */
- RCC8InEdgeIterator();
- /** Copy constructor */
- RCC8InEdgeIterator(const Self &iter);
- /** Constructor with input graph */
- RCC8InEdgeIterator(VertexDescriptorType vertex, GraphType * graph);
- /**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
- RCC8ValueType GetValue(void);
- /**
- * Return the source vertex of the current edge.
- * \return The source edge.
- */
- VertexPointerType GetSourceVertex(void);
- /**
- * Return the source vertex index of the current edge.
- * \return The source vertex index.
- */
- VertexDescriptorType GetSourceIndex(void);
- /**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
- bool IsAtEnd(void);
- /**
- * Go to the beginning.
- */
- void GoToBegin(void);
- /**
- * Increment.
- */
- Self& operator ++();
- /**
- * Decrement.
- */
- Self& operator --();
- /**
- * Add
- */
- Self& operator +(int i);
-
- /**
- * Remove
- */
- Self& operator -(int i);
- /**
- * Difference comparison operator.
- */
- bool operator !=(const Self& it);
- /**
- * Equality comparison operator.
- */
- bool operator ==(const Self& it);
- /**
- * Instantiation operator.
- */
- Self& operator =(const Self& it);
-private:
- // End
- InternalIteratorType m_End;
- // Internal iterator.
- InternalIteratorType m_Iter;
- // Input graph pointer
- GraphPointerType m_Graph;
- // Target vertex index
- VertexDescriptorType m_VertexIndex;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8InEdgeIterator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.hxx b/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.hxx
deleted file mode 100644
index 5fb34dce81bd7e9f27a2b24dc2e3c851bcce20da..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8InEdgeIterator.hxx
+++ /dev/null
@@ -1,198 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8InEdgeIterator_hxx
-#define otbRCC8InEdgeIterator_hxx
-
-#include "otbRCC8InEdgeIterator.h"
-
-namespace otb
-{
-/** Constructor */
-template <class TGraph>
-RCC8InEdgeIterator<TGraph>
-::RCC8InEdgeIterator()
-{
- m_Graph = GraphType::New();
- boost::tuples::tie(m_Iter, m_End) = in_edges(0, *m_Graph->GetGraph());
-}
-/**
- * Copy operator.
- */
-template <class TGraph>
-RCC8InEdgeIterator<TGraph>
-::RCC8InEdgeIterator(const Self& iter)
-{
- m_Iter = iter.m_Iter;
- m_Graph = iter.m_Graph;
- m_VertexIndex = iter.m_VertexIndex;
- m_End = iter.m_End;
-}
-/**
- *Constructor with input graph
- */
-template <class TGraph>
-RCC8InEdgeIterator<TGraph>
-::RCC8InEdgeIterator(VertexDescriptorType vertex, GraphType * graph)
-{
- m_Graph = graph;
- m_VertexIndex = vertex;
- boost::tuples::tie(m_Iter, m_End) = in_edges(vertex, *m_Graph->GetGraph());
-}
-/**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::RCC8ValueType
-RCC8InEdgeIterator<TGraph>
-::GetValue(void)
-{
- return (*m_Graph->GetGraph())[*m_Iter]->GetValue();
-}
-/**
- * Return the source vertex of the current edge.
- * \return The source edge.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::VertexPointerType
-RCC8InEdgeIterator<TGraph>
-::GetSourceVertex(void)
-{
- return (*m_Graph->GetGraph())[source(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return the source vertex index of the current edge.
- * \return The source vertex index.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::VertexDescriptorType
-RCC8InEdgeIterator<TGraph>
-::GetSourceIndex(void)
-{
- IndexMapType index = get(boost::vertex_index, (*m_Graph->GetGraph()));
- return index[source(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
-template <class TGraph>
-bool
-RCC8InEdgeIterator<TGraph>
-::IsAtEnd(void)
-{
- return (m_Iter == m_End);
-}
-/**
- * Go to the beginning.
- */
-template <class TGraph>
-void
-RCC8InEdgeIterator<TGraph>
-::GoToBegin(void)
-{
- boost::tuples::tie(m_Iter, m_End) = in_edges(m_VertexIndex, *m_Graph->GetGraph());
-}
-/**
- * Increment.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::Self&
-RCC8InEdgeIterator<TGraph>
-::operator++ ()
- {
- ++m_Iter;
- return *this;
- }
-/**
- * Decrement.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::Self&
-RCC8InEdgeIterator<TGraph>
-::operator-- ()
- {
- --m_Iter;
- return *this;
- }
-/**
- * Add
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::Self&
-RCC8InEdgeIterator<TGraph>
-::operator + (int i)
- {
- m_Iter = m_Iter + i;
- return *this;
- }
-/**
- * Remove
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::Self&
-RCC8InEdgeIterator<TGraph>
-::operator - (int i)
- {
- m_Iter = m_Iter - i;
- return *this;
- }
-/**
- * Difference comparison operator.
- */
-template <class TGraph>
-bool
-RCC8InEdgeIterator<TGraph>
-::operator != (const Self &iter)
- {
- return (m_Iter != iter.m_Iter);
- }
-/**
- * Equality comparison operator.
- */
-template <class TGraph>
-bool
-RCC8InEdgeIterator<TGraph>
-::operator == (const Self &iter)
- {
- return (m_Iter == iter.m_Iter);
- }
-/**
- * Instantiation operator.
- */
-template <class TGraph>
-typename RCC8InEdgeIterator<TGraph>
-::Self&
-RCC8InEdgeIterator<TGraph>
-::operator = (const Self &iter)
- {
- m_Iter = iter.m_Iter;
- return *this;
- }
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.h b/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.h
deleted file mode 100644
index 3d22bc092c7d8fcc56d71ccb350faca408442961..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.h
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8OutEdgeIterator_h
-#define otbRCC8OutEdgeIterator_h
-
-#include "otbRCC8Graph.h"
-
-namespace otb
-{
-/**
- * \class RCC8OutEdgeIterator
- * \brief Iterates on the graph out edges from a vertex.
- *
- * \ingroup OTBRCC8
- */
-template <class TGraph>
-class ITK_EXPORT RCC8OutEdgeIterator
-{
-public:
- /** self typedef */
- typedef RCC8OutEdgeIterator Self;
-
- /** Graph typedef */
- typedef TGraph GraphType;
- typedef typename GraphType::InternalGraphType InternalGraphType;
- typedef typename GraphType::Pointer GraphPointerType;
- typedef typename GraphType::EdgePointerType EdgePointerType;
- typedef typename GraphType::VertexPointerType VertexPointerType;
- typedef typename GraphType::VertexDescriptorType VertexDescriptorType;
- typedef typename GraphType::RCC8ValueType RCC8ValueType;
- /** typedef of the internal iterator */
- typedef typename boost::graph_traits<InternalGraphType>::out_edge_iterator InternalIteratorType;
- /** Typedef of the index map */
- typedef typename boost::property_map<InternalGraphType, boost::vertex_index_t>::type IndexMapType;
-
- /** Constructor */
- RCC8OutEdgeIterator();
- /** Copy constructor */
- RCC8OutEdgeIterator(const Self &iter);
- /** Constructor with input graph */
- RCC8OutEdgeIterator(VertexDescriptorType vertex, TGraph * graph);
- /**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
- RCC8ValueType GetValue(void);
- /**
- * Return the target vertex of the current edge.
- * \return The target vertex.
- */
- VertexPointerType GetTargetVertex(void);
- /**
- * Return the target vertex index of the current edge.
- * \return The target vertex index.
- */
- VertexDescriptorType GetTargetIndex(void);
-
- /**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
- bool IsAtEnd(void);
- /**
- * Go to the beginning.
- */
- void GoToBegin(void);
- /**
- * Increment.
- */
- Self& operator ++();
- /**
- * Decrement.
- */
- Self& operator --();
- /**
- * Add
- */
- Self& operator +(int i);
- /**
- * Remove
- */
- Self& operator -(int i);
- /**
- * Difference comparison operator.
- */
- bool operator !=(const Self& it);
- /**
- * Equality comparison operator.
- */
- bool operator ==(const Self& it);
- /**
- * Instantiation operator.
- */
- Self& operator =(const Self& it);
-private:
- // End
- InternalIteratorType m_End;
- // Internal iterator.
- InternalIteratorType m_Iter;
- // Input graph pointer
- GraphPointerType m_Graph;
- // source vertex descriptor
- VertexDescriptorType m_VertexIndex;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8OutEdgeIterator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.hxx b/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.hxx
deleted file mode 100644
index 811e850eda67dcac88f74c85c8f44369b92c413e..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8OutEdgeIterator.hxx
+++ /dev/null
@@ -1,198 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8OutEdgeIterator_hxx
-#define otbRCC8OutEdgeIterator_hxx
-
-#include "otbRCC8OutEdgeIterator.h"
-
-namespace otb
-{
-/** Constructor */
-template <class TGraph>
-RCC8OutEdgeIterator<TGraph>
-::RCC8OutEdgeIterator()
-{
- m_Graph = GraphType::New();
- tie(m_Iter, m_End) = out_edges(0, *m_Graph->GetGraph());
-}
-/**
- * Copy operator.
- */
-template <class TGraph>
-RCC8OutEdgeIterator<TGraph>
-::RCC8OutEdgeIterator(const Self& iter)
-{
- m_Iter = iter.m_Iter;
- m_Graph = iter.m_Graph;
- m_VertexIndex = iter.m_VertexIndex;
- m_End = iter.m_End;
-}
-/**
- *Constructor with input graph
- */
-template <class TGraph>
-RCC8OutEdgeIterator<TGraph>
-::RCC8OutEdgeIterator(VertexDescriptorType vertex, TGraph * graph)
-{
- m_Graph = graph;
- m_VertexIndex = vertex;
- tie(m_Iter, m_End) = out_edges(vertex, *m_Graph->GetGraph());
-}
-/**
- * Get the current edge value.
- * \return The value of the current edge pointed by the iterator.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::RCC8ValueType
-RCC8OutEdgeIterator<TGraph>
-::GetValue(void)
-{
- return (*m_Graph->GetGraph())[*m_Iter]->GetValue();
-}
-/**
- * Return the target vertex of the current edge.
- * \return The target vertex.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::VertexPointerType
-RCC8OutEdgeIterator<TGraph>
-::GetTargetVertex(void)
-{
- return (*m_Graph->GetGraph())[target(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return the target vertex index of the current edge.
- * \return The target vertex index.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::VertexDescriptorType
-RCC8OutEdgeIterator<TGraph>
-::GetTargetIndex(void)
-{
- IndexMapType index = get(boost::vertex_index, (*m_Graph->GetGraph()));
- return index[target(*m_Iter, (*m_Graph->GetGraph()))];
-}
-/**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
-template <class TGraph>
-bool
-RCC8OutEdgeIterator<TGraph>
-::IsAtEnd(void)
-{
- return (m_Iter == m_End);
-}
-/**
- * Go to the beginning.
- */
-template <class TGraph>
-void
-RCC8OutEdgeIterator<TGraph>
-::GoToBegin(void)
-{
- tie(m_Iter, m_End) = out_edges(m_VertexIndex, *m_Graph->GetGraph());
-}
-/**
- * Increment.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::Self&
-RCC8OutEdgeIterator<TGraph>
-::operator++ ()
- {
- ++m_Iter;
- return *this;
- }
-/**
- * Decrement.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::Self&
-RCC8OutEdgeIterator<TGraph>
-::operator-- ()
- {
- --m_Iter;
- return *this;
- }
-/**
- * Add
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::Self&
-RCC8OutEdgeIterator<TGraph>
-::operator + (int i)
- {
- m_Iter = m_Iter + i;
- return *this;
- }
-/**
- * Remove
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::Self&
-RCC8OutEdgeIterator<TGraph>
-::operator - (int i)
- {
- m_Iter = m_Iter - i;
- return *this;
- }
-/**
- * Difference comparison operator.
- */
-template <class TGraph>
-bool
-RCC8OutEdgeIterator<TGraph>
-::operator != (const Self &iter)
- {
- return (m_Iter != iter.m_Iter);
- }
-/**
- * Equality comparison operator.
- */
-template <class TGraph>
-bool
-RCC8OutEdgeIterator<TGraph>
-::operator == (const Self &iter)
- {
- return (m_Iter == iter.m_Iter);
- }
-/**
- * Instantiation operator.
- */
-template <class TGraph>
-typename RCC8OutEdgeIterator<TGraph>
-::Self&
-RCC8OutEdgeIterator<TGraph>
-::operator = (const Self &iter)
- {
- m_Iter = iter.m_Iter;
- return *this;
- }
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8Value.h b/Modules/OBIA/RCC8/include/otbRCC8Value.h
deleted file mode 100644
index 24bc9c96c1039c35daae218c76ebe8fe233ffee6..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8Value.h
+++ /dev/null
@@ -1,40 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8Value_h
-#define otbRCC8Value_h
-
-namespace otb
-{
-// Coding enum system to represent the RCC8 relation values.
-typedef enum
- {
- OTB_RCC8_DC,
- OTB_RCC8_EC,
- OTB_RCC8_PO,
- OTB_RCC8_TPP,
- OTB_RCC8_TPPI,
- OTB_RCC8_NTPP,
- OTB_RCC8_NTPPI,
- OTB_RCC8_EQ
- }
-RCC8Value;
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexBase.h b/Modules/OBIA/RCC8/include/otbRCC8VertexBase.h
deleted file mode 100644
index 3876c423319ecb4768529dbaa454a7d1f1e14bb4..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexBase.h
+++ /dev/null
@@ -1,102 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexBase_h
-#define otbRCC8VertexBase_h
-
-#include "itkDataObject.h"
-#include "itkObjectFactory.h"
-#include <cstdlib>
-
-namespace otb
-{
-/** \class RCC8VertexBase
- * \brief Base class to represent a vertex in a RCC8 Graph.
- *
- * This class can be derived to add attributes to the vertices of the
- * RCC8 graph.
- *
- * \sa RCC8Graph, RCC8Edge
- *
- * \ingroup OTBRCC8
- */
-template <class TPath>
-class ITK_EXPORT RCC8VertexBase
- : public itk::DataObject
-{
-public:
- /** Standard class typedefs */
- typedef RCC8VertexBase Self;
- typedef itk::DataObject Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8VertexBase, DataObject);
- /** Input image associated typedefs*/
- typedef TPath PathType;
- typedef typename PathType::Pointer PathPointerType;
- typedef typename PathType::ContinuousIndexType ContinuousIndexType;
-
- /** char* vector attributes */
- typedef std::map<std::string, std::string> AttributesMapType;
-
- /** Segmentation image index accessors */
- itkGetMacro(SegmentationLevel, unsigned int);
- itkSetMacro(SegmentationLevel, unsigned int);
- itkGetMacro(SegmentationType, bool);
- itkSetMacro(SegmentationType, bool);
- /** Object label in image accessor */
- itkGetObjectMacro(Path, PathType);
- itkSetObjectMacro(Path, PathType);
- /**
- * Set the VertexBase attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
- virtual void SetAttributesMap(AttributesMapType attributes);
- /**
- * Get an attributes vector representing the VertexBase attributes.
- * \return The attributes vector
- */
- virtual AttributesMapType GetAttributesMap(void);
-
-protected:
- /** Constructor */
- RCC8VertexBase();
- /** Desctructor */
- ~RCC8VertexBase() override {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** The segmentation level */
- unsigned int m_SegmentationLevel;
- /** True if bright details, false otherwise */
- bool m_SegmentationType;
- /** The path of the edge of the region */
- PathPointerType m_Path;
-};
-} // end namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8VertexBase.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexBase.hxx b/Modules/OBIA/RCC8/include/otbRCC8VertexBase.hxx
deleted file mode 100644
index 3464483c73676d4ef2b909bc129cfd34058570cb..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexBase.hxx
+++ /dev/null
@@ -1,125 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexBase_hxx
-#define otbRCC8VertexBase_hxx
-
-#include "otbRCC8VertexBase.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath>
-RCC8VertexBase<TPath>
-::RCC8VertexBase()
-{
- m_SegmentationLevel = 0;
- m_SegmentationType = true;
- m_Path = PathType::New();
- m_Path->Initialize();
-}
-/**
- * Set the VertexBase attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
-template <class TPath>
-void
-RCC8VertexBase<TPath>
-::SetAttributesMap(AttributesMapType attributes)
-{
- m_SegmentationLevel = static_cast<unsigned int>(atoi(attributes["SegmentationLevel"].c_str()));
- m_SegmentationType = static_cast<bool>(atoi(attributes["SegmentationType"].c_str()));
- unsigned int nbPoints = static_cast<unsigned int>(atoi(attributes["NumberOfPointsInPath"].c_str()));
-
- std::ostringstream oss;
-
- m_Path = PathType::New();
- m_Path->Initialize();
-
- for (unsigned int i = 0; i < nbPoints; ++i)
- {
- ContinuousIndexType newPoint;
- oss << "P" << i << "x";
- newPoint[0] = atof(attributes[oss.str()].c_str());
- oss.str("");
- oss << "P" << i << "y";
- newPoint[1] = atof(attributes[oss.str()].c_str());
- oss.str("");
- m_Path->AddVertex(newPoint);
- }
-}
-/**
- * Get an attributes vector representing the VertexBase attributes.
- * \return The attributes vector
- */
-template <class TPath>
-typename RCC8VertexBase<TPath>::AttributesMapType
-RCC8VertexBase<TPath>
-::GetAttributesMap(void)
-{
- std::ostringstream oss;
- AttributesMapType results;
- oss << m_SegmentationLevel;
- results["SegmentationLevel"] = oss.str();
- oss.str("");
- oss << m_SegmentationType;
- results["SegmentationType"] = oss.str();
- oss.str("");
- oss << m_Path->GetVertexList()->Size();
- results["NumberOfPointsInPath"] = oss.str();
- oss.str("");
-
- typename PathType::VertexListType::ConstIterator it;
- unsigned int index = 0;
-
- for (it = m_Path->GetVertexList()->Begin(); it != m_Path->GetVertexList()->End(); ++it, ++index)
- {
- ContinuousIndexType point = it.Value();
- oss << "P" << index << "x";
- std::string key = oss.str();
- oss.str("");
- oss << point[0];
- results[key] = oss.str();
- oss.str("");
- oss << "P" << index << "y";
- key = oss.str();
- oss.str("");
- oss << point[1];
- results[key] = oss.str();
- oss.str("");
- }
- return results;
-}
-/**
- * PrintSelf method
- */
-template <class TPath>
-void
-RCC8VertexBase<TPath>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "SegmentationLevel: " << m_SegmentationLevel << std::endl;
- os << indent << "SegmentationType: " << m_SegmentationType << std::endl;
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.h b/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.h
deleted file mode 100644
index 51d771e11ae2298f66fdacb4b2ec3c16e7a28cea..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.h
+++ /dev/null
@@ -1,124 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexIterator_h
-#define otbRCC8VertexIterator_h
-
-#include "otbRCC8Graph.h"
-
-namespace otb
-{
-/**
- * \class RCC8VertexIterator
- * \brief Iterates on the graph vertices
- *
- * \ingroup OTBRCC8
- */
-template <class TGraph>
-class ITK_EXPORT RCC8VertexIterator
-{
-public:
- /** self typedef */
- typedef RCC8VertexIterator Self;
-
- /** Graph typedef */
- typedef TGraph GraphType;
- typedef typename GraphType::InternalGraphType InternalGraphType;
- typedef typename GraphType::Pointer GraphPointerType;
- typedef typename GraphType::VertexPointerType VertexPointerType;
- typedef typename GraphType::VertexDescriptorType VertexDescriptorType;
- /** typedef of the internal iterator */
- typedef typename boost::graph_traits<InternalGraphType>::vertex_iterator InternalIteratorType;
- /** Typedef of the index map */
- typedef typename boost::property_map<InternalGraphType, boost::vertex_index_t>::type IndexMapType;
- /** Constructor */
- RCC8VertexIterator();
- /** Copy constructor */
- RCC8VertexIterator(const Self &iter);
- /** Constructor with input graph */
- RCC8VertexIterator(TGraph * graph);
- /**
- * Get the current vertex.
- * \return The current vertex pointed by the iterator.
- */
- VertexPointerType Get(void);
- /**
- * Set the current vertex.
- * \param vertex The vertex to set.
- */
- void Set(VertexPointerType vertex);
- /**
- * Get the current vertex index.
- * \return The current vertex index.
- */
- VertexDescriptorType GetIndex(void);
- /**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
- bool IsAtEnd(void);
- /**
- * Go to the beginning.
- */
- void GoToBegin(void);
- /**
- * Increment.
- */
- Self& operator ++();
- /**
- * Decrement.
- */
- Self& operator --();
- /**
- * Add
- */
- Self& operator +(int i);
-
- /**
- * Remove
- */
- Self& operator -(int i);
- /**
- * Difference comparison operator.
- */
- bool operator !=(const Self& it);
- /**
- * Equality comparison operator.
- */
- bool operator ==(const Self& it);
- /**
- * Instantiation operator.
- */
- Self& operator =(const Self& it);
-private:
- // End
- InternalIteratorType m_End;
- // Internal iterator.
- InternalIteratorType m_Iter;
- // Input graph pointer
- GraphPointerType m_Graph;
-};
-} // End namespace otb
-
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8VertexIterator.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.hxx b/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.hxx
deleted file mode 100644
index 29d13da47d71fa201169c86f2c03f14a6fddbc21..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexIterator.hxx
+++ /dev/null
@@ -1,197 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexIterator_hxx
-#define otbRCC8VertexIterator_hxx
-
-#include "otbRCC8VertexIterator.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TGraph>
-RCC8VertexIterator<TGraph>
-::RCC8VertexIterator()
-{
- m_Graph = GraphType::New();
- boost::tie(m_Iter, m_End) = boost::vertices(*(m_Graph->GetGraph()));
-}
-/**
- * Copy operator.
- */
-template <class TGraph>
-RCC8VertexIterator<TGraph>
-::RCC8VertexIterator(const Self& iter)
-{
- m_Iter = iter.m_Iter;
- m_Graph = iter.m_Graph;
- m_End = iter.m_End;
-}
-/**
- *Constructor with input graph
- */
-template <class TGraph>
-RCC8VertexIterator<TGraph>
-::RCC8VertexIterator(TGraph * graph)
-{
- m_Graph = graph;
- boost::tie(m_Iter, m_End) = boost::vertices(*(m_Graph->GetGraph()));
-}
-/**
- * Get the current object.
- * \return The current object pointed by the iterator.
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::VertexPointerType
-RCC8VertexIterator<TGraph>
-::Get(void)
-{
- return (*(m_Graph->GetGraph()))[*m_Iter];
-}
-/**
- * Set the current vertex.
- * \param vertex The vertex to set.
- */
-template <class TGraph>
-void
-RCC8VertexIterator<TGraph>
-::Set(VertexPointerType vertex)
-{
- (*(m_Graph->GetGraph()))[*m_Iter] = vertex;
-}
-/**
- * Get the current vertex index.
- * \return The current vertex index.
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::VertexDescriptorType
-RCC8VertexIterator<TGraph>
-::GetIndex(void)
-{
- IndexMapType index = get(boost::vertex_index, (*m_Graph->GetGraph()));
- return index[*m_Iter];
-}
-/**
- * Return true if the iterator is at the end.
- * \return True if the iterator is at the end.
- */
-template <class TGraph>
-bool
-RCC8VertexIterator<TGraph>
-::IsAtEnd(void)
-{
- return (m_Iter == m_End);
-}
-/**
- * Go to the beginning.
- */
-template <class TGraph>
-void
-RCC8VertexIterator<TGraph>
-::GoToBegin(void)
-{
- boost::tie(m_Iter, m_End) = boost::vertices(*(m_Graph->GetGraph()));
-}
-/**
- * Increment.
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::Self&
-RCC8VertexIterator<TGraph>
-::operator++ ()
- {
- ++m_Iter;
- return *this;
- }
-/**
- * Decrement.
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::Self&
-RCC8VertexIterator<TGraph>
-::operator-- ()
- {
- --m_Iter;
- return *this;
- }
-/**
- * Add
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::Self&
-RCC8VertexIterator<TGraph>
-::operator + (int i)
- {
- m_Iter = m_Iter + i;
- return *this;
- }
-/**
- * Remove
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::Self&
-RCC8VertexIterator<TGraph>
-::operator - (int i)
- {
- m_Iter = m_Iter - i;
- return *this;
- }
-/**
- * Difference comparison operator.
- */
-template <class TGraph>
-bool
-RCC8VertexIterator<TGraph>
-::operator != (const Self &iter)
- {
- return (m_Iter != iter.m_Iter);
- }
-/**
- * Equality comparison operator.
- */
-template <class TGraph>
-bool
-RCC8VertexIterator<TGraph>
-::operator == (const Self &iter)
- {
- return (m_Iter == iter.m_Iter);
- }
-/**
- * Instantiation operator.
- */
-template <class TGraph>
-typename RCC8VertexIterator<TGraph>
-::Self&
-RCC8VertexIterator<TGraph>
-::operator = (const Self &iter)
- {
- m_Iter = iter.m_Iter;
- return *this;
- }
-} // End namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.h b/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.h
deleted file mode 100644
index 8b87a877ad3b3c54111a4f66b9d4dd120cd36a62..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.h
+++ /dev/null
@@ -1,88 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexWithCompacity_h
-#define otbRCC8VertexWithCompacity_h
-
-#include "otbRCC8VertexBase.h"
-
-namespace otb
-{
-/** \class RCC8VertexWithCompacity
- * \brief Class to represent a vertex in a RCC8 Graph with the compacity value of
- * the represented region.
- *
- * \sa RCC8Graph, RCC8Edge, RCC8VertexBase
- *
- * \ingroup OTBRCC8
- */
-template <class TPath, class TPrecision = float>
-class ITK_EXPORT RCC8VertexWithCompacity
- : public RCC8VertexBase<TPath>
-{
-public:
- /** Standard class typedefs */
- typedef RCC8VertexWithCompacity Self;
- typedef otb::RCC8VertexBase<TPath> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8VertexWithCompacity, RCC8VertexBase);
- /** Input image associated typedefs*/
- typedef TPath PathType;
- /** Precision typedef */
- typedef TPrecision PrecisionType;
- /** char* vector attributes */
- typedef typename Superclass::AttributesMapType AttributesMapType;
-
- /** Segmentation image index accessors */
- itkGetMacro(Compacity, PrecisionType);
- itkSetMacro(Compacity, PrecisionType);
- /**
- * Set the VertexWithCompacity attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
- void SetAttributesMap(AttributesMapType attributes) override;
- /**
- * Get an attributes vector representing the VertexWithCompacity attributes.
- * \return The attributes vector
- */
- AttributesMapType GetAttributesMap(void) override;
-
-protected:
- /** Constructor */
- RCC8VertexWithCompacity();
- /** Desctructor */
- ~RCC8VertexWithCompacity() override {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- /** The compacity */
- PrecisionType m_Compacity;
-};
-} // end namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8VertexWithCompacity.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.hxx b/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.hxx
deleted file mode 100644
index 9ad40b3424598407c9686e51f24835f57ff3c6e8..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexWithCompacity.hxx
+++ /dev/null
@@ -1,78 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexWithCompacity_hxx
-#define otbRCC8VertexWithCompacity_hxx
-
-#include "otbRCC8VertexWithCompacity.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPath, class TPrecision>
-RCC8VertexWithCompacity<TPath, TPrecision>
-::RCC8VertexWithCompacity()
-{
- m_Compacity = 0.0;
-}
-/**
- * Set the VertexWithCompacity attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
-template <class TPath, class TPrecision>
-void
-RCC8VertexWithCompacity<TPath, TPrecision>
-::SetAttributesMap(AttributesMapType attributes)
-{
- this->Superclass::SetAttributesMap(attributes);
- m_Compacity = static_cast<TPrecision>(atof(attributes["Compacity"].c_str()));
-}
-/**
- * Get an attributes vector representing the VertexBase attributes.
- * \return The attributes vector
- */
-template <class TPath, class TPrecision>
-typename RCC8VertexWithCompacity<TPath, TPrecision>::AttributesMapType
-RCC8VertexWithCompacity<TPath, TPrecision>
-::GetAttributesMap(void)
-{
- std::stringstream oss;
- AttributesMapType results;
- results = this->Superclass::GetAttributesMap();
- oss << m_Compacity;
- results["Compacity"] = oss.str();
- oss.str("");
- return results;
-}
-/**
- * PrintSelf method
- */
-template <class TPath, class TPrecision>
-void
-RCC8VertexWithCompacity<TPath, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "Compacity: " << m_Compacity << std::endl;
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.h b/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.h
deleted file mode 100644
index 6916c936f5fb7c376123c59e0801fb9623cd8105..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.h
+++ /dev/null
@@ -1,90 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexWithRegionCenter_h
-#define otbRCC8VertexWithRegionCenter_h
-
-#include "otbRCC8VertexBase.h"
-
-namespace otb
-{
-/** \class RCC8VertexWithRegionCenter
- * \brief Class to represent a vertex in a RCC8 Graph with the compacity value of
- * the represented region.
- *
- * \sa RCC8Graph, RCC8Edge, RCC8VertexBase
- *
- * \ingroup OTBRCC8
- */
-template <class TLabel, class TPrecision = float>
-class ITK_EXPORT RCC8VertexWithRegionCenter
- : public RCC8VertexBase<TLabel>
-{
-public:
- /** Standard class typedefs */
- typedef RCC8VertexWithRegionCenter Self;
- typedef otb::RCC8VertexBase<TLabel> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
- /** Run-time type information (and related methods). */
- itkTypeMacro(RCC8VertexWithRegionCenter, RCC8VertexBase);
- /** Input image associated typedefs*/
- typedef TLabel LabelType;
- /** Precision typedef */
- typedef TPrecision PrecisionType;
- /** char* vector attributes */
- typedef typename Superclass::AttributesMapType AttributesMapType;
-
- itkGetMacro(RegionCenterXCoordinate, PrecisionType);
- itkSetMacro(RegionCenterXCoordinate, PrecisionType);
- itkGetMacro(RegionCenterYCoordinate, PrecisionType);
- itkSetMacro(RegionCenterYCoordinate, PrecisionType);
- /**
- * Set the VertexWithRegionCenter attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
- void SetAttributesMap(AttributesMapType attributes);
- /**
- * Get an attributes vector representing the VertexWithRegionCenter attributes.
- * \return The attributes vector
- */
- AttributesMapType GetAttributesMap(void);
-
-protected:
- /** Constructor */
- RCC8VertexWithRegionCenter();
- /** Desctructor */
- ~RCC8VertexWithRegionCenter() {}
- /** PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const;
-
-private:
- /** The compacity */
- PrecisionType m_RegionCenterXCoordinate;
- PrecisionType m_RegionCenterYCoordinate;
-};
-} // end namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbRCC8VertexWithRegionCenter.hxx"
-#endif
-
-#endif
diff --git a/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.hxx b/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.hxx
deleted file mode 100644
index 42f9c3adc5872e069ebefc923dec5faf5578069b..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/include/otbRCC8VertexWithRegionCenter.hxx
+++ /dev/null
@@ -1,84 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbRCC8VertexWithRegionCenter_hxx
-#define otbRCC8VertexWithRegionCenter_hxx
-
-#include "otbRCC8VertexWithRegionCenter.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TLabel, class TPrecision>
-RCC8VertexWithRegionCenter<TLabel, TPrecision>
-::RCC8VertexWithRegionCenter()
-{
- m_RegionCenterXCoordinate = 0.0;
- m_RegionCenterYCoordinate = 0.0;
-}
-/**
- * Set the VertexWithRegionCenter attributes from the attributes vector.
- * \param attributes The vector containing the parsed attributes.
- */
-template <class TLabel, class TPrecision>
-void
-RCC8VertexWithRegionCenter<TLabel, TPrecision>
-::SetAttributesMap(AttributesMapType attributes)
-{
- this->Superclass::SetAttributesMap(attributes);
- m_RegionCenterXCoordinate = static_cast<TPrecision>(atof(attributes["RegionCenterXCoordinate"].c_str()));
- m_RegionCenterYCoordinate = static_cast<TPrecision>(atof(attributes["RegionCenterYCoordinate"].c_str()));
-}
-/**
- * Get an attributes vector representing the VertexBase attributes.
- * \return The attributes vector
- */
-template <class TLabel, class TPrecision>
-typename RCC8VertexWithRegionCenter<TLabel, TPrecision>::AttributesMapType
-RCC8VertexWithRegionCenter<TLabel, TPrecision>
-::GetAttributesMap(void)
-{
- std::stringstream oss;
- AttributesMapType results;
- results = this->Superclass::GetAttributesMap();
- oss << m_RegionCenterXCoordinate;
- results["RegionCenterXCoordinate"] = oss.str();
- oss.str("");
- oss << m_RegionCenterYCoordinate;
- results["RegionCenterYCoordinate"] = oss.str();
- oss.str("");
- return results;
-}
-/**
- * PrintSelf method
- */
-template <class TLabel, class TPrecision>
-void
-RCC8VertexWithRegionCenter<TLabel, TPrecision>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "RegionCenterXCoordinate: " << m_RegionCenterXCoordinate << std::endl;
- os << indent << "RegionCenterXCoordinate: " << m_RegionCenterYCoordinate << std::endl;
-}
-} // end namespace otb
-#endif
diff --git a/Modules/OBIA/RCC8/otb-module.cmake b/Modules/OBIA/RCC8/otb-module.cmake
deleted file mode 100644
index 5e9a368a74170e6094b54479d9477820fd6e7511..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/otb-module.cmake
+++ /dev/null
@@ -1,45 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "The region connection calculus (RCC) is used for qualitative
-spatial representation and . RCC abstractly describes regions by their possible
-relations to each other (8 basic relations are possible between two regions). The
-RCC8 constraint language has been popularly adopted by the GIS communities. This
-module provides classes related to this purpose.")
-
-otb_module(OTBRCC8
- DEPENDS
- OTBITK
- OTBImageBase
- OTBRoadExtraction
- OTBImageManipulation
- OTBPath
- OTBCommon
- OTBBoostAdapters
- OTBObjectList
-
- TEST_DEPENDS
- OTBVectorDataBase
- OTBTestKernel
- OTBImageIO
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/OBIA/RCC8/src/CMakeLists.txt b/Modules/OBIA/RCC8/src/CMakeLists.txt
deleted file mode 100644
index 1b18d1544cc6d894fe150c1c4efa644f2b875ae1..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/src/CMakeLists.txt
+++ /dev/null
@@ -1,34 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(OTBRCC8_SRC
- otbRCC8Edge.cxx
- )
-
-add_library(OTBRCC8 ${OTBRCC8_SRC})
-target_link_libraries(OTBRCC8
- ${OTBImageManipulation_LIBRARIES}
- ${OTBImageBase_LIBRARIES}
- ${OTBCommon_LIBRARIES}
- ${OTBBoost_LIBRARIES}
-
- )
-
-otb_module_target(OTBRCC8)
diff --git a/Modules/OBIA/RCC8/src/otbRCC8Edge.cxx b/Modules/OBIA/RCC8/src/otbRCC8Edge.cxx
deleted file mode 100644
index 361123310263e7d8c2b4165490e2cc799fd21f0a..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/src/otbRCC8Edge.cxx
+++ /dev/null
@@ -1,42 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-#include "otbRCC8Edge.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-RCC8Edge::RCC8Edge()
-{
- m_Value = OTB_RCC8_DC;
-}
-/**
- * PrintSelf method
- */
-void
-RCC8Edge::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
- os << indent << "RCC8 Value: " << m_Value << std::endl;
-}
-} // end namespace otb
diff --git a/Modules/OBIA/RCC8/test/CMakeLists.txt b/Modules/OBIA/RCC8/test/CMakeLists.txt
deleted file mode 100644
index 72b127feda0de107037af29017097f9bbde8b9c1..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/CMakeLists.txt
+++ /dev/null
@@ -1,170 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBRCC8Tests
-otbRCC8TestDriver.cxx
-otbRCC8GraphFileReader.cxx
-otbRCC8GraphIOEndToEnd.cxx
-otbPolygonListToRCC8GraphFilter.cxx
-otbRCC8VertexBase.cxx
-otbPolygonToPolygonRCC8Calculator.cxx
-otbImageToImageRCC8Calculator.cxx
-otbRCC8Edge.cxx
-otbRCC8VertexWithCompacity.cxx
-otbRCC8Graph.cxx
-otbRCC8GraphFileWriter.cxx
-otbImageMultiSegmentationToRCC8GraphFilter.cxx
-)
-
-add_executable(otbRCC8TestDriver ${OTBRCC8Tests})
-target_link_libraries(otbRCC8TestDriver ${OTBRCC8-Test_LIBRARIES})
-otb_module_target_label(otbRCC8TestDriver)
-
-# Tests Declaration
-
-otb_add_test(NAME srTvRCC8GraphFileReader COMMAND otbRCC8TestDriver
- otbRCC8GraphFileReader
- ${TEMP}/srRCC8GraphWriterOutput1.dot
- )
-set_property(TEST srTvRCC8GraphFileReader PROPERTY DEPENDS srTvRCC8GraphFileWriter)
-
-otb_add_test(NAME srTvRCC8GraphIOEndToEnd COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphWriterOutput1.dot
- ${TEMP}/srRCC8GraphIOEndToEndOut.dot
- otbRCC8GraphIOEndToEnd
- ${BASELINE_FILES}/srRCC8GraphWriterOutput1.dot
- ${TEMP}/srRCC8GraphIOEndToEndOut.dot
- )
-
-otb_add_test(NAME srTvPolygonListToRCC8GraphFilter COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srTvPolygonListToRCC8GraphFilterOutput.dot
- ${TEMP}/srTvPolygonListToRCC8GraphFilterOutput.dot
- otbPolygonListToRCC8GraphFilter
- ${TEMP}/srTvPolygonListToRCC8GraphFilterOutput.dot)
-
-otb_add_test(NAME srTvRCC8VertexBase COMMAND otbRCC8TestDriver
- otbRCC8VertexBase
- 5
- 5
- )
-
-otb_add_test(NAME srTvPolygonRCC8Calculator COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8PolygonToPolygonCalculatorOutput.txt
- ${TEMP}/srRCC8PolygonToPolygonCalculatorOutput.txt
- otbPolygonToPolygonRCC8Calculator
- 4
- ${TEMP}/srRCC8PolygonToPolygonCalculatorOutput.txt
- ${INPUTDATA}/rcc8_mire1.png
- ${INPUTDATA}/rcc8_mire2.png
- ${INPUTDATA}/rcc8_mire3.png
- ${INPUTDATA}/rcc8_mire4.png
- )
-
-otb_add_test(NAME srTvRCC8Calculator COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8CalculatorOutput.txt
- ${TEMP}/srRCC8CalculatorOutput.txt
- otbImageToImageRCC8Calculator
- 4
- ${TEMP}/srRCC8CalculatorOutput.txt
- ${INPUTDATA}/rcc8_mire1.png
- ${INPUTDATA}/rcc8_mire2.png
- ${INPUTDATA}/rcc8_mire3.png
- ${INPUTDATA}/rcc8_mire4.png
- )
-
-otb_add_test(NAME srTvRCC8Edge COMMAND otbRCC8TestDriver
- otbRCC8Edge
- )
-
-otb_add_test(NAME srTvRCC8VertexWithCompacity COMMAND otbRCC8TestDriver
- otbRCC8VertexWithCompacity
- 5
- 5
- 0.125354
- )
-
-otb_add_test(NAME srTvRCC8Graph COMMAND otbRCC8TestDriver
- otbRCC8Graph
- )
-
-otb_add_test(NAME srTvRCC8GraphFileWriter COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphWriterOutput1.dot
- ${TEMP}/srRCC8GraphWriterOutput1.dot
- otbRCC8GraphFileWriter
- ${TEMP}/srRCC8GraphWriterOutput1.dot
- )
-
-otb_add_test(NAME srTvMultiSegToRCC8GraphFilter1 COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphFilterOutput.dot
- ${TEMP}/srRCC8GraphFilterOutput.dot
- otbImageMultiSegmentationToRCC8GraphFilter
- ${TEMP}/srRCC8GraphFilterOutput.dot
- 0
- 2
- ${INPUTDATA}/Seg1InputForRCC8Graph.tif
- ${INPUTDATA}/Seg2InputForRCC8Graph.tif
- )
-
-otb_add_test(NAME srTvMultiSegToRCC8GraphFilter2 COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphFilterOutput2.dot
- ${TEMP}/srRCC8GraphFilterOutput2.dot
- otbImageMultiSegmentationToRCC8GraphFilter
- ${TEMP}/srRCC8GraphFilterOutput2.dot
- 0
- 3
- ${INPUTDATA}/Seg3InputForRCC8Graph.tif
- ${INPUTDATA}/Seg4InputForRCC8Graph.tif
- ${INPUTDATA}/Seg5InputForRCC8Graph.tif
- )
-
-otb_add_test(NAME srTvMultiSegToRCC8GraphFilter2WithOpti COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphFilterOutput2.dot
- ${TEMP}/srRCC8GraphFilterOutput2WithOpti.dot
- otbImageMultiSegmentationToRCC8GraphFilter
- ${TEMP}/srRCC8GraphFilterOutput2WithOpti.dot
- 1
- 3
- ${INPUTDATA}/Seg3InputForRCC8Graph.tif
- ${INPUTDATA}/Seg4InputForRCC8Graph.tif
- ${INPUTDATA}/Seg5InputForRCC8Graph.tif
- )
-
-otb_add_test(NAME srTvMultiSegToRCC8GraphFilter1WithOpti COMMAND otbRCC8TestDriver
- --compare-ascii ${NOTOL}
- ${BASELINE_FILES}/srRCC8GraphFilterOutput.dot
- ${TEMP}/srRCC8GraphFilterOutputWithOpti.dot
- otbImageMultiSegmentationToRCC8GraphFilter
- ${TEMP}/srRCC8GraphFilterOutputWithOpti.dot
- 1
- 2
- ${INPUTDATA}/Seg1InputForRCC8Graph.tif
- ${INPUTDATA}/Seg2InputForRCC8Graph.tif
- )
-
diff --git a/Modules/OBIA/RCC8/test/otbImageMultiSegmentationToRCC8GraphFilter.cxx b/Modules/OBIA/RCC8/test/otbImageMultiSegmentationToRCC8GraphFilter.cxx
deleted file mode 100644
index b212a1a3ff8e28f4d3d77959fb6765fdac815625..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbImageMultiSegmentationToRCC8GraphFilter.cxx
+++ /dev/null
@@ -1,70 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbImageList.h"
-#include "otbPolygon.h"
-#include "otbRCC8VertexBase.h"
-#include "otbImageMultiSegmentationToRCC8GraphFilter.h"
-#include "otbImageFileReader.h"
-#include "otbRCC8GraphFileWriter.h"
-
-int otbImageMultiSegmentationToRCC8GraphFilter(int itkNotUsed(argc), char* argv[])
-{
- const unsigned int Dimension = 2;
- char * outputFilename = argv[1];
- int useOptimisation = atoi(argv[2]);
- unsigned int nbImages = atoi(argv[3]);
-
- // typedefs
- typedef unsigned short LabelPixelType;
- typedef otb::Image<LabelPixelType, Dimension> LabelImageType;
- typedef otb::Polygon<> PolygonType;
- typedef otb::RCC8VertexBase<PolygonType> VertexType;
- typedef otb::RCC8Graph<VertexType> RCC8GraphType;
- typedef otb::ImageMultiSegmentationToRCC8GraphFilter<LabelImageType, RCC8GraphType>
- RCC8GraphFilterType;
- typedef otb::ImageList<LabelImageType> ImageListType;
- typedef otb::ImageFileReader<LabelImageType> ReaderType;
- typedef otb::RCC8GraphFileWriter<RCC8GraphType> GraphWriterType;
-
- ImageListType::Pointer inputList = ImageListType::New();
-
- // Reading input images
- for (unsigned int i = 0; i < nbImages; ++i)
- {
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(argv[4 + i]);
- reader->Update();
- inputList->PushBack(reader->GetOutput());
- }
- std::cout << "Input image loaded into images list." << std::endl;
- // Instantiation
- RCC8GraphFilterType::Pointer filter = RCC8GraphFilterType::New();
- filter->SetInput(inputList);
- filter->SetOptimisation(useOptimisation > 0);
-
- // Writing output graph
- GraphWriterType::Pointer writer = GraphWriterType::New();
- writer->SetFileName(outputFilename);
- writer->SetInput(filter->GetOutput());
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbImageToImageRCC8Calculator.cxx b/Modules/OBIA/RCC8/test/otbImageToImageRCC8Calculator.cxx
deleted file mode 100644
index 0a5d2e1f1c86ac6317c7c83a35d9711b73904d6c..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbImageToImageRCC8Calculator.cxx
+++ /dev/null
@@ -1,110 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbImageToImageRCC8Calculator.h"
-#include "otbImageList.h"
-#include "otbImageFileReader.h"
-
-int otbImageToImageRCC8Calculator(int itkNotUsed(argc), char* argv[])
-{
- const unsigned int Dimension = 2;
-
- int nbImages = atoi(argv[1]);
- char * outfile = argv[2];
-
- typedef unsigned char PixelType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::ImageToImageRCC8Calculator<ImageType> CalculatorType;
- typedef otb::ImageList<ImageType> ImageListType;
- typedef ImageListType::Iterator IteratorType;
- // reference image list
- ImageListType::Pointer images = ImageListType::New();
-
- // Reading input images
- std::ofstream out;
- out.open(outfile, std::ios::out);
- out << "Test results from otbImageToImageRCC8calculator test." << std::endl;
- for (int k = 1; k <= nbImages; ++k)
- {
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(argv[2 + k]);
- reader->Update();
- images->PushBack(reader->GetOutput());
- }
- // Declaration
- CalculatorType::Pointer calc, calc1, calc2;
- // Computing relations for each images couple
- int i = 1;
- int j = 1;
- for (IteratorType it1 = images->Begin(); it1 != images->End(); ++it1)
- {
- for (IteratorType it2 = images->Begin(); it2 != images->End(); ++it2)
- {
- std::cout << "Test: computing relation " << i << "," << j << std::endl;
- calc = CalculatorType::New();
- calc->SetInput1(it1.Get());
- calc->SetInput2(it2.Get());
- calc->Update();
- out << calc->GetValue() << "\t";
-
- if (calc->GetValue() < 3
- || calc->GetValue() == 4
- || calc->GetValue() == 6)
- {
- calc1 = CalculatorType::New();
- calc1->SetInput1(it1.Get());
- calc1->SetInput2(it2.Get());
- calc1->SetLevel1APrioriKnowledge(true);
- calc1->Update();
- if (calc1->GetValue() != calc->GetValue())
- {
- std::cout << "Test failed: Result with level1AprioriKnowledge ";
- std::cout << "different from result without a priori knowledge" << std::endl;
- std::cout << calc->GetValue() << "!=" << calc1->GetValue() << std::endl;
- return EXIT_FAILURE;
- }
- }
- if (calc->GetValue() < 4)
- {
- calc2 = CalculatorType::New();
- calc2->SetInput1(it1.Get());
- calc2->SetInput2(it2.Get());
- calc2->SetLevel3APrioriKnowledge(true);
- calc2->Update();
- if (calc2->GetValue() != calc->GetValue())
- {
- std::cout << "Test failed: Result with level3AprioriKnowledge ";
- std::cout << "different from result without a priori knowledge" << std::endl;
- std::cout << calc->GetValue() << "!=" << calc2->GetValue() << std::endl;
- return EXIT_FAILURE;
- }
- }
- ++j;
- }
- j = 1;
- ++i;
- out << std::endl;
- }
- out.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbPolygonListToRCC8GraphFilter.cxx b/Modules/OBIA/RCC8/test/otbPolygonListToRCC8GraphFilter.cxx
deleted file mode 100644
index fd136fba08b08afb0be9a7e6ed23acf0ca4d9d6c..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbPolygonListToRCC8GraphFilter.cxx
+++ /dev/null
@@ -1,114 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbPolygon.h"
-#include "otbObjectList.h"
-#include "otbRCC8VertexBase.h"
-#include "otbPolygonListToRCC8GraphFilter.h"
-#include "otbRCC8GraphFileWriter.h"
-
-// typedefs
-typedef otb::Polygon<> PolygonType;
-typedef otb::ObjectList<PolygonType> PolygonListType;
-typedef otb::RCC8VertexBase<PolygonType> VertexType;
-typedef otb::RCC8Graph<VertexType> RCC8GraphType;
-typedef otb::PolygonListToRCC8GraphFilter<PolygonListType, RCC8GraphType> RCC8GraphFilterType;
-typedef otb::RCC8GraphFileWriter<RCC8GraphType> GraphWriterType;
-
-
-PolygonType::VertexType Vertex(double i,double j)
-{
- PolygonType::VertexType vertex;
- vertex[0] = i;
- vertex[1] = j;
-
- return vertex;
-}
-
-
-int otbPolygonListToRCC8GraphFilter(int itkNotUsed(argc), char* argv[])
-{
- char * outfile = argv[1];
-
- PolygonListType::Pointer regions = PolygonListType::New();
-
- RCC8GraphFilterType::SegmentationRangesType ranges;
-
- ranges.push_back(0);
-
- PolygonType::Pointer polygon = PolygonType::New();
- polygon->AddVertex(Vertex(0,0));
- polygon->AddVertex(Vertex(2,0));
- polygon->AddVertex(Vertex(2,6));
- polygon->AddVertex(Vertex(0,6));
- regions->PushBack(polygon);
-
- polygon = PolygonType::New();
- polygon->AddVertex(Vertex(1,1));
- polygon->AddVertex(Vertex(4,1));
- polygon->AddVertex(Vertex(4,5));
- polygon->AddVertex(Vertex(1,5));
- regions->PushBack(polygon);
-
- ranges.push_back(2);
-
- polygon = PolygonType::New();
- polygon->AddVertex(Vertex(3,1));
- polygon->AddVertex(Vertex(4,1));
- polygon->AddVertex(Vertex(4,2));
- polygon->AddVertex(Vertex(3,2));
- regions->PushBack(polygon);
-
- polygon = PolygonType::New();
- polygon->AddVertex(Vertex(5,1));
- polygon->AddVertex(Vertex(8,1));
- polygon->AddVertex(Vertex(8,5));
- polygon->AddVertex(Vertex(5,5));
- regions->PushBack(polygon);
-
- ranges.push_back(4);
-
- polygon = PolygonType::New();
- polygon->AddVertex(Vertex(6,2));
- polygon->AddVertex(Vertex(7,2));
- polygon->AddVertex(Vertex(7,3));
- polygon->AddVertex(Vertex(6,3));
- regions->PushBack(polygon);
-
- polygon = PolygonType::New();
- polygon->AddVertex(Vertex(8,1));
- polygon->AddVertex(Vertex(9,1));
- polygon->AddVertex(Vertex(9,5));
- polygon->AddVertex(Vertex(8,5));
- regions->PushBack(polygon);
-
- // Filter instantiation
- RCC8GraphFilterType::Pointer filter = RCC8GraphFilterType::New();
-
- filter->SetInput(regions);
- filter->SetSegmentationRanges(ranges);
-
- GraphWriterType::Pointer writer = GraphWriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfile);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbPolygonToPolygonRCC8Calculator.cxx b/Modules/OBIA/RCC8/test/otbPolygonToPolygonRCC8Calculator.cxx
deleted file mode 100644
index 3f3aa4a6c1f9c203a7e0ae98d4b710a68786c9db..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbPolygonToPolygonRCC8Calculator.cxx
+++ /dev/null
@@ -1,158 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbPolygonToPolygonRCC8Calculator.h"
-#include "otbImageFileReader.h"
-#include "otbPolygon.h"
-#include "otbImageToEdgePathFilter.h"
-#include "otbSimplifyPathListFilter.h"
-
-int otbPolygonToPolygonRCC8Calculator(int itkNotUsed(argc), char* argv[])
-{
- const unsigned int Dimension = 2;
-
- int nbImages = atoi(argv[1]);
- char * outfile = argv[2];
-
- typedef unsigned char PixelType;
- typedef otb::Polygon<> PolygonType;
- typedef otb::Image<PixelType, Dimension> ImageType;
- typedef otb::ImageToEdgePathFilter<ImageType, PolygonType> EdgeExtractionFilterType;
- typedef otb::SimplifyPathListFilter<PolygonType> SimplifyPathFilterType;
- typedef SimplifyPathFilterType::InputListType PathListType;
- typedef otb::ImageFileReader<ImageType> ReaderType;
- typedef otb::PolygonToPolygonRCC8Calculator<PolygonType> CalculatorType;
-
- PolygonType::Pointer path = PolygonType::New();
-
- PolygonType::ContinuousIndexType a1, a2, a3, a4, a5, a6, a7;
-
- a1[0] = 0;
- a1[1] = 0;
- a2[0] = 10;
- a2[1] = 0;
- a3[0] = 10;
- a3[1] = 10;
- a4[0] = 10;
- a4[1] = 0;
-
- a5[0] = 5;
- a5[1] = 5;
-
- a6[0] = 5;
- a6[1] = 0;
-
- a7[0] = 100;
- a7[1] = 100;
-
- path->AddVertex(a1);
- path->AddVertex(a2);
- path->AddVertex(a3);
- path->AddVertex(a4);
-
- CalculatorType::Pointer calc = CalculatorType::New();
-
- typedef PathListType::Iterator IteratorType;
-
- // reference image list
- PathListType::Pointer regions = PathListType::New();
-
- // Reading input images
- std::ofstream out;
- out.open(outfile, std::ios::out);
- out << "Test results from otbPolygonToPolygonRCC8calculator test." << std::endl;
- for (int cpt = 1; cpt <= nbImages; ++cpt)
- {
- ReaderType::Pointer reader = ReaderType::New();
- reader->SetFileName(argv[2 + cpt]);
- EdgeExtractionFilterType::Pointer extraction = EdgeExtractionFilterType::New();
- extraction->SetInput(reader->GetOutput());
- extraction->SetForegroundValue(255);
- extraction->Update();
- regions->PushBack(extraction->GetOutput());
- }
-
- SimplifyPathFilterType::Pointer simplifier = SimplifyPathFilterType::New();
- simplifier->SetInput(regions);
- simplifier->GetFunctor().SetTolerance(0.1);
- simplifier->Update();
-
- // Declaration
- CalculatorType::Pointer calc1, calc2, calc3;
- // Computing relations for each images couple
- unsigned int i = 1;
- unsigned int j = 1;
- for (IteratorType it1 = simplifier->GetOutput()->Begin(); it1 != simplifier->GetOutput()->End(); ++it1)
- {
- for (IteratorType it2 = simplifier->GetOutput()->Begin(); it2 != simplifier->GetOutput()->End(); ++it2)
- {
- std::cout << "Test: computing relation " << i << "," << j << std::endl;
- calc1 = CalculatorType::New();
- calc1->SetPolygon1(it1.Get());
- calc1->SetPolygon2(it2.Get());
- calc1->Compute();
- out << calc1->GetValue() << "\t";
- std::cout << "Result without a priori knowledge " << calc1->GetValue() << std::endl;
-
- if (calc1->GetValue() < 3
- || calc1->GetValue() == 4
- || calc1->GetValue() == 6)
- {
- calc2 = CalculatorType::New();
- calc2->SetPolygon1(it1.Get());
- calc2->SetPolygon2(it2.Get());
- calc2->SetLevel1APrioriKnowledge(true);
- calc2->Compute();
- std::cout << "Result with level1 a priori knowledge " << calc2->GetValue() << std::endl;
- if (calc2->GetValue() != calc1->GetValue())
- {
- std::cout << "Test failed: Result with level1AprioriKnowledge ";
- std::cout << "different from result without a priori knowledge" << std::endl;
- std::cout << calc1->GetValue() << "!=" << calc2->GetValue() << std::endl;
- return EXIT_FAILURE;
- }
- }
- if (calc1->GetValue() < 4)
- {
- calc3 = CalculatorType::New();
- calc3->SetPolygon1(it1.Get());
- calc3->SetPolygon2(it2.Get());
- calc3->SetLevel3APrioriKnowledge(true);
- calc3->Compute();
- std::cout << "Result with level3 a priori knowledge " << calc3->GetValue() << std::endl;
- if (calc3->GetValue() != calc1->GetValue())
- {
- std::cout << "Test failed: Result with level3AprioriKnowledge ";
- std::cout << "different from result without a priori knowledge" << std::endl;
- std::cout << calc1->GetValue() << "!=" << calc3->GetValue() << std::endl;
- return EXIT_FAILURE;
- }
- }
- ++j;
- }
- j = 1;
- ++i;
- out << std::endl;
- }
- out.close();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8Edge.cxx b/Modules/OBIA/RCC8/test/otbRCC8Edge.cxx
deleted file mode 100644
index 31087db07704262c17156a98e79155651fbbc707..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8Edge.cxx
+++ /dev/null
@@ -1,42 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "otbRCC8Edge.h"
-#include <cstdlib>
-
-int otbRCC8Edge(int itkNotUsed(argc), char * itkNotUsed(argv) [])
-{
- typedef otb::RCC8Edge RCC8EdgeType;
- typedef RCC8EdgeType::RCC8ValueType RCC8ValueType;
- RCC8ValueType value = otb::OTB_RCC8_DC;
-
- // Instantiation
- RCC8EdgeType::Pointer edge = RCC8EdgeType::New();
- edge->SetValue(value);
-
- if (edge->GetValue() != value)
- {
- std::cout << "Test failed: edge->GetValue()!=value" << std::endl;
- return EXIT_FAILURE;
- }
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8Graph.cxx b/Modules/OBIA/RCC8/test/otbRCC8Graph.cxx
deleted file mode 100644
index 47e5bb08efc4b453abf16a9ab4d0c495b80ed239..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8Graph.cxx
+++ /dev/null
@@ -1,152 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexBase.h"
-#include "otbRCC8VertexIterator.h"
-#include "otbRCC8EdgeIterator.h"
-#include "otbRCC8InEdgeIterator.h"
-#include "otbRCC8OutEdgeIterator.h"
-#include "otbMacro.h"
-#include "otbPolygon.h"
-
-int otbRCC8Graph(int itkNotUsed(argc), char * itkNotUsed(argv) [])
-{
- const unsigned int nbVertices = 2;
- typedef otb::Polygon<> PathType;
- typedef PathType::VertexType PointType;
- typedef otb::RCC8VertexBase<PathType> VertexType;
- typedef otb::RCC8Graph<VertexType> RCC8GraphType;
- typedef otb::RCC8VertexIterator<RCC8GraphType> VertexIteratorType;
- typedef otb::RCC8EdgeIterator<RCC8GraphType> EdgeIteratorType;
-
- // Instantiation
- RCC8GraphType::Pointer rcc8Graph = RCC8GraphType::New();
- // Setting the number of vertices
- rcc8Graph->SetNumberOfVertices(nbVertices - 1);
- // Call to the build method
- rcc8Graph->Build();
-
- PointType p1, p2, p3, p4, p5, p6;
-
- p1[0] = 0;
- p1[1] = 0;
- p2[0] = 10;
- p2[1] = 10;
- p3[0] = 10;
- p3[1] = 0;
- p4[0] = 20;
- p4[1] = 20;
- p5[0] = 20;
- p5[1] = 10;
- p6[0] = 10;
- p6[1] = 20;
-
- unsigned int vertex1SegLevel = 0;
- unsigned int vertex2SegLevel = 10;
- bool vertex1SegType = true;
- bool vertex2SegType = false;
-
- PathType::Pointer path1 = PathType::New();
- path1->AddVertex(p1);
- path1->AddVertex(p2);
- path1->AddVertex(p3);
-
- VertexType::Pointer vertex1 = VertexType::New();
- vertex1->SetSegmentationLevel(vertex1SegLevel);
- vertex1->SetSegmentationType(vertex1SegType);
- vertex1->SetPath(path1);
-
- PathType::Pointer path2 = PathType::New();
- path2->AddVertex(p4);
- path2->AddVertex(p5);
- path2->AddVertex(p6);
-
- VertexType::Pointer vertex2 = VertexType::New();
- vertex2->SetSegmentationLevel(vertex2SegLevel);
- vertex2->SetSegmentationType(vertex2SegType);
- vertex2->SetPath(path2);
-
- rcc8Graph->SetVertex(0, vertex1);
- rcc8Graph->SetVertex(1, vertex2);
-
- otbControlConditionTestMacro(rcc8Graph->GetNumberOfVertices() != nbVertices,
- "rcc8Graph->GetNumberOfVertices()!=nbVertices");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(0)->GetSegmentationLevel() != vertex1SegLevel,
- "rcc8Graph->GetVertex(0)->GetSegmentationLevel()!=vertex1SegLevel");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(0)->GetSegmentationType() != vertex1SegType,
- "rcc8Graph->GetVertex(0)->GetSegmentationType()!=vertex1SegType");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(0) != p1,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(1) != p2,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(2) != p3,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(2)!=p3");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(1)->GetSegmentationLevel() != vertex2SegLevel,
- "rcc8Graph->GetVertex(1)->GetSegmentationLevel()!=vertex2SegLevel");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(1)->GetSegmentationType() != vertex2SegType,
- "rcc8Graph->GetVertex(1)->GetObjectLabelInImgage()!=vertex2SegType");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(0) != p4,
- "rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(0)!=p4");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(1) != p5,
- "rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(1)!=p5");
- otbControlConditionTestMacro(rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(2) != p6,
- "rcc8Graph->GetVertex(1)->GetPath()->GetVertexList()->GetElement(2)!=p6");
-
- VertexIteratorType v(rcc8Graph);
- v.GoToBegin();
- otbControlConditionTestMacro(v.Get()->GetSegmentationLevel() != vertex1SegLevel,
- "v.Get()->GetSegmentationLevel()!=vertex1SegLevel");
- otbControlConditionTestMacro(v.Get()->GetSegmentationType() != vertex1SegType,
- "v.Get()->GetSegmentationType()!=vertex1SegType");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(0) != p1,
- "v.Get()->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(1) != p2,
- "v.Get()->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(2) != p3,
- "v.Get()->GetPath()->GetVertexList()->GetElement(2)!=p3");
- ++v;
- otbControlConditionTestMacro(v.Get()->GetSegmentationLevel() != vertex2SegLevel,
- "v.Get()->GetSegmentationLevel()!=vertex2SegLevel");
- otbControlConditionTestMacro(v.Get()->GetSegmentationType() != vertex2SegType,
- "v.Get()->GetObjectLabelInImgage()!=vertex2SegType");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(0) != p4,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(0)!=p4");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(1) != p5,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(1)!=p5");
- otbControlConditionTestMacro(v.Get()->GetPath()->GetVertexList()->GetElement(2) != p6,
- "rcc8Graph->GetVertex(0)->GetPath()->GetVertexList()->GetElement(2)!=p6");
-
- // Testing the edge iterator
- rcc8Graph->AddEdge(0, 1, otb::OTB_RCC8_NTPPI);
-
- otbControlConditionTestMacro(rcc8Graph->GetNumberOfEdges() != 1,
- "rcc8Graph->GetNumberOfEdges()!=1");
-
- EdgeIteratorType e(rcc8Graph);
- e.GoToBegin();
- otbControlConditionTestMacro(e.GetValue() != otb::OTB_RCC8_NTPPI,
- "e.GetValue()!=otb::OTB_RCC8_NTPPI");
- otbControlConditionTestMacro(e.GetSourceIndex() != 0,
- "e.GetSourceIndex()!=0");
- otbControlConditionTestMacro(e.GetTargetIndex() != 1,
- "e.GetTargetIndex()!=1");
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8GraphFileReader.cxx b/Modules/OBIA/RCC8/test/otbRCC8GraphFileReader.cxx
deleted file mode 100644
index 6c6807946062948b332eab371e1f49f47f1eb599..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8GraphFileReader.cxx
+++ /dev/null
@@ -1,118 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexIterator.h"
-#include "otbRCC8EdgeIterator.h"
-#include "otbRCC8VertexBase.h"
-#include "otbRCC8GraphFileReader.h"
-#include "otbMacro.h"
-#include "otbPolygon.h"
-
-int otbRCC8GraphFileReader(int itkNotUsed(argc), char* argv[])
-{
- char * inputFilename = argv[1];
- typedef otb::Polygon<> PathType;
- typedef otb::RCC8VertexBase<PathType> VertexType;
- typedef otb::RCC8Graph<VertexType> RCC8GraphType;
- typedef otb::RCC8GraphFileReader<RCC8GraphType> RCC8GraphFileReaderType;
- typedef otb::RCC8VertexIterator<RCC8GraphType> VertexIteratorType;
- typedef otb::RCC8EdgeIterator<RCC8GraphType> EdgeIteratorType;
-
- // Instantiation
- RCC8GraphFileReaderType::Pointer rcc8GraphReader = RCC8GraphFileReaderType::New();
- rcc8GraphReader->SetFileName(inputFilename);
-
- rcc8GraphReader->Update();
-
- // Getting the output graph
- RCC8GraphType::Pointer graph = rcc8GraphReader->GetOutput();
-
- // Checking vertices
- VertexIteratorType vIt(graph);
- unsigned int count = 0;
-
- otbControlConditionTestMacro(graph->GetNumberOfVertices() != 4,
- "graph->GetNumberOfVertices()!=4");
- otbControlConditionTestMacro(graph->GetNumberOfEdges() != 6,
- "graph->GetNumberOfEdges()!=6");
-
- // Checking edges
- EdgeIteratorType eIt(graph);
- count = 0;
- for (eIt.GoToBegin(); !eIt.IsAtEnd(); ++eIt, ++count)
- {
- switch (count)
- {
- case 0:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_EC,
- "eIt.GetValue()!=otb::OTB_RCC8_EC");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 0,
- "eIt.GetSourceIndex()!=0");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 1,
- "eIt.GetTargetIndex()!=1");
- break;
- case 1:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_PO,
- "eIt.GetValue()!=otb::OTB_RCC8_PO");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 1,
- "eIt.GetSourceIndex()!=1");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 2,
- "eIt.GetTargetIndex()!=2");
- break;
- case 2:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_TPP,
- "eIt.GetValue()!=otb::OTB_RCC8_TPP");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 2,
- "eIt.GetSourceIndex()!=2");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 3,
- "eIt.GetTargetIndex()!=3");
- break;
- case 3:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_TPPI,
- "eIt.GetValue()!=otb::OTB_RCC8_TPPI");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 0,
- "eIt.GetSourceIndex()!=0");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 2,
- "eIt.GetTargetIndex()!=2");
- break;
- case 4:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_NTPP,
- "eIt.GetValue()!=otb::OTB_RCC8_NTPP");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 1,
- "eIt.GetSourceIndex()!=1");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 3,
- "eIt.GetTargetIndex()!=3");
- break;
- case 5:
- otbControlConditionTestMacro(eIt.GetValue() != otb::OTB_RCC8_NTPPI,
- "eIt.GetValue()!=otb::OTB_RCC8_NTPPI");
- otbControlConditionTestMacro(eIt.GetSourceIndex() != 0,
- "eIt.GetSourceIndex()!=0");
- otbControlConditionTestMacro(eIt.GetTargetIndex() != 3,
- "eIt.GetTargetIndex()!=3");
- break;
- default:
- otbControlConditionTestMacro(true, "Error in graph reading.");
- break;
- }
- }
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8GraphFileWriter.cxx b/Modules/OBIA/RCC8/test/otbRCC8GraphFileWriter.cxx
deleted file mode 100644
index 943183126a0653768d444a6c7ba0221443947b3c..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8GraphFileWriter.cxx
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexBase.h"
-#include "otbRCC8GraphFileWriter.h"
-#include "otbPolygon.h"
-
-int otbRCC8GraphFileWriter(int itkNotUsed(argc), char* argv[])
-{
- const char * outputFile = argv[1];
-
- typedef otb::Polygon<> PathType;
- typedef otb::RCC8VertexBase<PathType> VertexType;
- typedef otb::RCC8Graph<VertexType> RCC8GraphType;
- typedef otb::RCC8GraphFileWriter<RCC8GraphType> RCC8GraphFileWriterType;
-
- // Graph instantiation
- RCC8GraphType::Pointer rcc8Graph = RCC8GraphType::New();
- rcc8Graph->SetNumberOfVertices(4);
- rcc8Graph->Build();
-
- // Vertex filling
- PathType::Pointer path = PathType::New();
- path->Initialize();
-
- PathType::ContinuousIndexType p1, p2, p3;
-
- p1[0] = 0;
- p1[1] = 0;
-
- p2[0] = 10;
- p2[1] = 10;
-
- p3[0] = -5;
- p3[1] = 2;
-
- path->AddVertex(p1);
- path->AddVertex(p2);
- path->AddVertex(p3);
-
- VertexType::Pointer vertex1, vertex2, vertex3, vertex4;
- vertex1 = VertexType::New();
- vertex1->SetSegmentationLevel(0);
- vertex1->SetSegmentationType(0);
- vertex1->SetPath(path);
- rcc8Graph->SetVertex(0, vertex1);
-
- vertex2 = VertexType::New();
- vertex2->SetSegmentationLevel(1);
- vertex2->SetSegmentationType(1);
- vertex2->SetPath(path);
- rcc8Graph->SetVertex(1, vertex2);
-
- vertex3 = VertexType::New();
- vertex3->SetSegmentationLevel(2);
- vertex3->SetSegmentationType(0);
- vertex3->SetPath(path);
- rcc8Graph->SetVertex(2, vertex3);
-
- vertex4 = VertexType::New();
- vertex4->SetSegmentationLevel(3);
- vertex4->SetSegmentationType(0);
- vertex4->SetPath(path);
- rcc8Graph->SetVertex(3, vertex4);
-
- // Edge filling
- rcc8Graph->AddEdge(0, 1, otb::OTB_RCC8_EC);
- rcc8Graph->AddEdge(1, 2, otb::OTB_RCC8_PO);
- rcc8Graph->AddEdge(2, 3, otb::OTB_RCC8_TPP);
- rcc8Graph->AddEdge(0, 2, otb::OTB_RCC8_TPPI);
- rcc8Graph->AddEdge(1, 3, otb::OTB_RCC8_NTPP);
- rcc8Graph->AddEdge(0, 3, otb::OTB_RCC8_NTPPI);
-
- // Instantiation
- RCC8GraphFileWriterType::Pointer rcc8GraphWriter
- = RCC8GraphFileWriterType::New();
- rcc8GraphWriter->SetFileName(outputFile);
- rcc8GraphWriter->SetInput(rcc8Graph);
- rcc8GraphWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8GraphIOEndToEnd.cxx b/Modules/OBIA/RCC8/test/otbRCC8GraphIOEndToEnd.cxx
deleted file mode 100644
index 2e274dac4c304505e2b28b82a530fce9d4a45bc9..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8GraphIOEndToEnd.cxx
+++ /dev/null
@@ -1,45 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexBase.h"
-#include "otbRCC8GraphFileReader.h"
-#include "otbRCC8GraphFileWriter.h"
-#include "otbPolygon.h"
-
-int otbRCC8GraphIOEndToEnd(int itkNotUsed(argc), char* argv[])
-{
- char * inputFilename = argv[1];
- char * outputFilename = argv[2];
- typedef otb::Polygon<> PathType;
- typedef otb::RCC8VertexBase<PathType> VertexType;
- typedef otb::RCC8Graph<VertexType> RCC8GraphType;
- typedef otb::RCC8GraphFileReader<RCC8GraphType> RCC8GraphFileReaderType;
- typedef otb::RCC8GraphFileWriter<RCC8GraphType> RCC8GraphFileWriterType;
-
- // End to end test
- RCC8GraphFileReaderType::Pointer rcc8GraphReader = RCC8GraphFileReaderType::New();
- rcc8GraphReader->SetFileName(inputFilename);
- RCC8GraphFileWriterType::Pointer rcc8GraphWriter = RCC8GraphFileWriterType::New();
- rcc8GraphWriter->SetInput(rcc8GraphReader->GetOutput());
- rcc8GraphWriter->SetFileName(outputFilename);
- rcc8GraphWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8TestDriver.cxx b/Modules/OBIA/RCC8/test/otbRCC8TestDriver.cxx
deleted file mode 100644
index 8a060d25bf7c343f4a8daa8d4e93f7415bae2507..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8TestDriver.cxx
+++ /dev/null
@@ -1,36 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbRCC8GraphFileReader);
- REGISTER_TEST(otbRCC8GraphIOEndToEnd);
- REGISTER_TEST(otbPolygonListToRCC8GraphFilter);
- REGISTER_TEST(otbRCC8VertexBase);
- REGISTER_TEST(otbPolygonToPolygonRCC8Calculator);
- REGISTER_TEST(otbImageToImageRCC8Calculator);
- REGISTER_TEST(otbRCC8Edge);
- REGISTER_TEST(otbRCC8VertexWithCompacity);
- REGISTER_TEST(otbRCC8Graph);
- REGISTER_TEST(otbRCC8GraphFileWriter);
- REGISTER_TEST(otbImageMultiSegmentationToRCC8GraphFilter);
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8VertexBase.cxx b/Modules/OBIA/RCC8/test/otbRCC8VertexBase.cxx
deleted file mode 100644
index 6578e4f6ae038cad1485118ed773f18f7c757222..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8VertexBase.cxx
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexBase.h"
-#include "otbPolygon.h"
-#include "otbMacro.h"
-
-int otbRCC8VertexBase(int itkNotUsed(argc), char* argv[])
-{
- typedef otb::Polygon<> PathType;
- unsigned int imageLevel = atoi(argv[1]);
- bool imageType = atoi(argv[2]);
- typedef otb::RCC8VertexBase<PathType> RCC8VertexType;
- typedef RCC8VertexType::AttributesMapType AttributesMapType;
- // Instantiation
- RCC8VertexType::Pointer vertex1 = RCC8VertexType::New();
-
- PathType::Pointer path = PathType::New();
- path->Initialize();
-
- PathType::ContinuousIndexType p1, p2, p3;
-
- p1[0] = 0;
- p1[1] = 0;
-
- p2[0] = 10;
- p2[1] = 10;
-
- p3[0] = -5;
- p3[1] = 2;
-
- path->AddVertex(p1);
- path->AddVertex(p2);
- path->AddVertex(p3);
-
- // Getters / setters tests
- vertex1->SetSegmentationLevel(imageLevel);
- vertex1->SetSegmentationType(imageType);
- vertex1->SetPath(path);
-
- otbControlConditionTestMacro(vertex1->GetSegmentationLevel() != imageLevel,
- "Test failed: vertex1->GetSegmentationLevel()!=imageLevel");
- otbControlConditionTestMacro(vertex1->GetSegmentationType() != imageType,
- "Test failed: vertex1->GetSegmentationType()!=imageType");
-
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(0) != p1,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(1) != p2,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(2) != p3,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(2)!=p3");
-
- // attributes vector set test
- AttributesMapType attr1 = vertex1->GetAttributesMap();
- otbControlConditionTestMacro(attr1["SegmentationLevel"].compare(std::string(argv[1])) != 0,
- "Test failed: vertex1->GetAttributesMap()[\"SegmentationLevel\"]!=std::string(argv[1])");
- otbControlConditionTestMacro(atoi(attr1["SegmentationType"].c_str()) != static_cast<int>(imageType),
- "Test failed:atoi(attr1[\"SegmentationType\"].c_str())!=imageType ");
-
- otbControlConditionTestMacro(atof(attr1["P0x"].c_str()) != p1[0],
- "Test failed: atof(attr1[\"P0x\"].c_str())!=p1[0]");
- otbControlConditionTestMacro(atof(attr1["P0y"].c_str()) != p1[1],
- "Test failed: atof(attr1[\"P0y\"].c_str())!=p1[1]");
- otbControlConditionTestMacro(atof(attr1["P1x"].c_str()) != p2[0],
- "Test failed: atof(attr1[\"P1x\"].c_str())!=p2[0]");
- otbControlConditionTestMacro(atof(attr1["P1y"].c_str()) != p2[1],
- "Test failed: atof(attr1[\"P1y\"].c_str())!=p2[1]");
- otbControlConditionTestMacro(atof(attr1["P2x"].c_str()) != p3[0],
- "Test failed: atof(attr1[\"P2x\"].c_str())!=p3[0]");
- otbControlConditionTestMacro(atof(attr1["P2y"].c_str()) != p3[1],
- "Test failed: atof( attr1[\"P2y\"].c_str())!=p3[1]");
-
- // attributes vector get test
- RCC8VertexType::Pointer vertex2 = RCC8VertexType::New();
- vertex2->SetAttributesMap(attr1);
- otbControlConditionTestMacro(vertex1->GetSegmentationLevel() != vertex2->GetSegmentationLevel(),
- "Test failed: vertex1->GetSegmentationLevel()!=vertex2->GetSegmentationLevel()");
- otbControlConditionTestMacro(vertex1->GetSegmentationType() != vertex2->GetSegmentationType(),
- "Test failed: vertex1->GetSegmentationType()!=vertex2->GetSegmentationType()");
-
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(0) != p1,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(1) != p2,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(2) != p3,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(2)!=p3");
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/OBIA/RCC8/test/otbRCC8VertexWithCompacity.cxx b/Modules/OBIA/RCC8/test/otbRCC8VertexWithCompacity.cxx
deleted file mode 100644
index 697aeda75e5b83da812d4ff32e112d5d88f34e70..0000000000000000000000000000000000000000
--- a/Modules/OBIA/RCC8/test/otbRCC8VertexWithCompacity.cxx
+++ /dev/null
@@ -1,124 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbRCC8VertexWithCompacity.h"
-#include "otbMacro.h"
-#include "otbPolygon.h"
-
-int otbRCC8VertexWithCompacity(int itkNotUsed(argc), char* argv[])
-{
- typedef otb::Polygon<> PathType;
- typedef double PrecisionType;
-
- unsigned int imageLevel = atoi(argv[1]);
- bool imageType = atoi(argv[2]);
- PrecisionType compacity = atof(argv[3]);
-
- typedef otb::RCC8VertexWithCompacity<PathType, PrecisionType> RCC8VertexType;
- typedef RCC8VertexType::AttributesMapType AttributesMapType;
- // Instantiation
- RCC8VertexType::Pointer vertex1 = RCC8VertexType::New();
-
- PathType::Pointer path = PathType::New();
- path->Initialize();
-
- PathType::ContinuousIndexType p1, p2, p3;
-
- p1[0] = 0;
- p1[1] = 0;
-
- p2[0] = 10;
- p2[1] = 10;
-
- p3[0] = -5;
- p3[1] = 2;
-
- path->AddVertex(p1);
- path->AddVertex(p2);
- path->AddVertex(p3);
-
- // Getters / setters tests
- vertex1->SetSegmentationLevel(imageLevel);
- vertex1->SetSegmentationType(imageType);
- vertex1->SetPath(path);
- vertex1->SetCompacity(compacity);
-
- otbControlConditionTestMacro(vertex1->GetSegmentationLevel() != imageLevel,
- "Test failed: vertex1->GetSegmentationLevel()!=imageLevel");
- otbControlConditionTestMacro(vertex1->GetSegmentationType() != imageType,
- "Test failed: vertex1->GetSegmentationType()!=imageType");
-
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(0) != p1,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(1) != p2,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(vertex1->GetPath()->GetVertexList()->GetElement(2) != p3,
- "Test failed:vertex1->GetPath()->GetVertexList()->GetElement(2)!=p3");
- otbControlConditionTestMacro(vertex1->GetCompacity() != compacity,
- "Test failed: vertex1->GetSegmentationImageIndex()!=imageIndex");
- // attributes vector set test
- AttributesMapType attr1 = vertex1->GetAttributesMap();
-
- std::ostringstream oss;
- oss << p1[0];
- otbControlConditionTestMacro(attr1["P0x"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P0x\"].compare(std::string(p1[0]))!=0");
- oss.str("");
- oss << p1[1];
- otbControlConditionTestMacro(attr1["P0y"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P0y\"].compare(std::string(p1[1]))!=0");
- oss.str("");
- oss << p2[0];
- otbControlConditionTestMacro(attr1["P1x"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P1x\"].compare(std::string(p2[0]))!=0");
- oss.str("");
- oss << p2[1];
- otbControlConditionTestMacro(attr1["P1y"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P1y\"].compare(std::string(p2[1]))!=0");
- oss.str("");
- oss << p3[0];
- otbControlConditionTestMacro(attr1["P2x"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P2x\"].compare(std::string(p3[0]))!=0");
- oss.str("");
- oss << p3[1];
- otbControlConditionTestMacro(attr1["P2y"].compare(oss.str()) != 0,
- "Test failed:attr1[\"P2y\"].compare(std::string(p3[1]))!=0");
-
- otbControlConditionTestMacro(attr1["Compacity"].compare(std::string(argv[3])) != 0,
- "Test failed: vertex1->GetAttributesMap()[\"Compacity\"]!=std::string(argv[2])");
- // attributes vector get test
- RCC8VertexType::Pointer vertex2 = RCC8VertexType::New();
- vertex2->SetAttributesMap(attr1);
- otbControlConditionTestMacro(vertex1->GetSegmentationLevel() != vertex2->GetSegmentationLevel(),
- "Test failed: vertex1->GetSegmentationLevel()!=vertex2->GetSegmentationLevel()");
- otbControlConditionTestMacro(vertex1->GetSegmentationType() != vertex2->GetSegmentationType(),
- "Test failed: vertex1->GetSegmentationType()!=vertex2->GetSegmentationType()");
-
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(0) != p1,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(0)!=p1");
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(1) != p2,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(1)!=p2");
- otbControlConditionTestMacro(vertex2->GetPath()->GetVertexList()->GetElement(2) != p3,
- "Test failed:vertex2->GetPath()->GetVertexList()->GetElement(2)!=p3");
- otbControlConditionTestMacro(vertex1->GetCompacity() != vertex2->GetCompacity(),
- "Test failed: vertex1->GetCompacity()!=vertex2->GetCompacity()");
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.h b/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.h
deleted file mode 100644
index 9d17e0198a0af4e365c7af5747f8edd91e1bb1ad..0000000000000000000000000000000000000000
--- a/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.h
+++ /dev/null
@@ -1,136 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNDVIDataNodeFeatureFunction_h
-#define otbNDVIDataNodeFeatureFunction_h
-
-#include "otbDataNodeImageFunction.h"
-
-#include "otbVegetationIndicesFunctor.h"
-#include "otbPolyLineImageConstIterator.h"
-
-namespace otb
-{
-/** \class NDVIDataNodeFeatureFunction
- * \brief Compute a NDVI based feature alongside a
- * datanode.
- *
- * This function compute a feature alongside a datanode.
- * The feature is (NDVI >= threshold) per cent along the
- * tested datanode.
- *
- * \ingroup Functions
- * \sa DataNodeImageFunction
- * \sa SpectralAngleDataNodeFeatureFunction
- *
- * \ingroup OTBIndices
- */
-
-template <
-class TImage,
-class TCoordRep = double,
-class TPrecision = double
->
-class ITK_EXPORT NDVIDataNodeFeatureFunction :
- public DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
-{
-public:
- /** Standard class typedefs. */
- typedef NDVIDataNodeFeatureFunction Self;
- typedef DataNodeImageFunction<TImage, std::vector<TPrecision>, TCoordRep, TPrecision>
- Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Method for creation through the object factory. */
- itkNewMacro(Self);
-
- /** Run-time type information (and related methods). */
- itkTypeMacro(NDVIDataNodeFeatureFunction, DataNodeImageFunction);
-
- /** Some typedefs. */
- typedef typename Superclass::DataNodeType DataNodeType;
- typedef typename DataNodeType::LineType LineType;
-
- typedef TImage InputImageType;
- typedef typename InputImageType::ConstPointer InputImageConstPointer;
- typedef typename InputImageType::PixelType PixelType;
- typedef typename InputImageType::InternalPixelType ScalarRealType;
- typedef typename InputImageType::IndexType IndexType;
- typedef typename InputImageType::IndexValueType IndexValueType;
-
- typedef TCoordRep CoordRepType;
-
- typedef TPrecision PrecisionType;
-
- typedef PolyLineImageConstIterator<InputImageType, LineType>
- ImageLineIteratorType;
-
- typedef Functor::NDVI<ScalarRealType, ScalarRealType> NDVIFunctorType;
-
- typedef std::vector<PrecisionType> OutputType;
-
- OutputType Evaluate( const DataNodeType& node ) const override;
-
- /** Set/Get methods */
- itkGetConstMacro(NDVIThreshold, PrecisionType);
- itkSetMacro(NDVIThreshold, PrecisionType);
-
- //TODO replace by metadata parsing
- unsigned int GetREDChannelIndex() const
- {
- return m_NDVIFunctor.GetBandIndex(CommonBandNames::RED);
- }
-
- void SetREDChannelIndex(unsigned int id)
- {
- m_NDVIFunctor.SetBandIndex(CommonBandNames::RED, id);
- }
-
- unsigned int GetNIRChannelIndex() const
- {
- return m_NDVIFunctor.GetBandIndex(CommonBandNames::NIR);
- }
-
- void SetNIRChannelIndex(unsigned int id)
- {
- m_NDVIFunctor.SetBandIndex(CommonBandNames::NIR, id);
- }
-
-protected:
- NDVIDataNodeFeatureFunction();
- ~NDVIDataNodeFeatureFunction() override {}
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- NDVIDataNodeFeatureFunction(const Self&) = delete;
- void operator=(const Self&) = delete;
-
- /** NDVI Threshold & Functor */
- PrecisionType m_NDVIThreshold;
- NDVIFunctorType m_NDVIFunctor;
-};
-
-}
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNDVIDataNodeFeatureFunction.hxx"
-#endif
-
-#endif
diff --git a/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.hxx b/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.hxx
deleted file mode 100644
index f6f33564d5c29ed8cec88bf73b4a6445df28c076..0000000000000000000000000000000000000000
--- a/Modules/Radiometry/Indices/include/otbNDVIDataNodeFeatureFunction.hxx
+++ /dev/null
@@ -1,140 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNDVIDataNodeFeatureFunction_hxx
-#define otbNDVIDataNodeFeatureFunction_hxx
-
-#include "otbNDVIDataNodeFeatureFunction.h"
-
-namespace otb
-{
-
-/**
- * Constructor
- */
-template <class TImage, class TCoordRep, class TPrecision>
-NDVIDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::NDVIDataNodeFeatureFunction()
-{
- m_NDVIThreshold = 0.3; //Advised for QuickBird images
- this->SetREDChannelIndex(3); //for QuickBird images
- this->SetNIRChannelIndex(4); //for QuickBird images
-}
-
-/**
- * Standard "PrintSelf" method
- */
-template <class TImage, class TCoordRep, class TPrecision>
-void
-NDVIDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::PrintSelf(
- std::ostream& os,
- itk::Indent indent) const
-{
- Superclass::PrintSelf( os, indent );
- os << indent << "NDVI Threshold: " << m_NDVIThreshold << std::endl;
- os << indent << "RED Channel Index: " << this->GetREDChannelIndex() << std::endl;
- os << indent << "NIR Channel Index: " << this->GetNIRChannelIndex() << std::endl;
-}
-
-
-template <class TImage, class TCoordRep, class TPrecision>
-typename NDVIDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::OutputType
- NDVIDataNodeFeatureFunction<TImage, TCoordRep, TPrecision>
-::Evaluate( const DataNodeType& node ) const
-{
- if(!((this->GetREDChannelIndex() <= this->GetInputImage()->GetNumberOfComponentsPerPixel())
- && (this->GetNIRChannelIndex() <= this->GetInputImage()->GetNumberOfComponentsPerPixel())
- && (this->GetREDChannelIndex() > 0)
- && (this->GetNIRChannelIndex() > 0)))
- {
- itkExceptionMacro(<< "Invalid RED or NIR Channel Index");
- }
-
- const typename ImageLineIteratorType::PathType* path;
-
- switch (node.GetNodeType())
- {
- case FEATURE_POINT:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- case FEATURE_LINE:
- {
- path = node.GetLine();
- break;
- }
- case FEATURE_POLYGON:
- {
- path = node.GetPolygonExteriorRing();
- break;
- }
- default:
- {
- itkExceptionMacro(<< "This DataNode type is not handle yet");
- break;
- }
- }
-
- ImageLineIteratorType lineIt(this->GetInputImage(), path);
- lineIt.GoToBegin();
-
- double nbValidPixel=0.;
- double nbVisitedPixel=0.;
-
- while(!lineIt.IsAtEnd())
- {
- if(this->IsInsideBuffer(lineIt.GetIndex()))
- {
- PixelType pixel = this->GetInputImage()->GetPixel(lineIt.GetIndex());
- if(m_NDVIFunctor(pixel) >= this->GetNDVIThreshold())
- {
- nbValidPixel += 1;
- }
- nbVisitedPixel += 1;
- }
- ++lineIt;
- }
-
- OutputType output;
-
- if(nbVisitedPixel == 0)
- {
- //std::cout << "nbValidPixel: " << nbValidPixel << "nbVisitedPixel" << nbVisitedPixel << std::endl;
- //itkExceptionMacro(<< "The DataNode and the Support Image are disjointed");
- output.push_back(static_cast<PrecisionType>(0.));
- }
- else
- {
- output.push_back(static_cast<PrecisionType>(nbValidPixel/nbVisitedPixel));
- }
-
- output.push_back(static_cast<PrecisionType>(nbValidPixel));
- output.push_back(static_cast<PrecisionType>(nbVisitedPixel));
-
- return output;
-}
-
-
-} // end namespace otb
-
-#endif
diff --git a/Modules/Radiometry/Indices/test/CMakeLists.txt b/Modules/Radiometry/Indices/test/CMakeLists.txt
index 79e4a828212956c5a5a7aa28977d4767115aa396..1424624291fd33d8f96baac6b64d02de0418e5e8 100644
--- a/Modules/Radiometry/Indices/test/CMakeLists.txt
+++ b/Modules/Radiometry/Indices/test/CMakeLists.txt
@@ -23,7 +23,6 @@ otb_module_test()
set(OTBIndicesTests
otbIndicesTestDriver.cxx
otbRadiometricIndicesTest.cxx
-otbNDVIDataNodeFeatureFunction.cxx
otbLandsatTMIndexNDSITest.cxx
otbLandsatTMIndexBIOTest.cxx
otbLandsatTMIndexMIR2Test.cxx
@@ -52,31 +51,6 @@ otb_module_target_label(otbIndicesTestDriver)
# Tests Declaration
-otb_add_test(NAME bfTvNDVIDataNodeFeatureFunction_Polygon COMMAND otbIndicesTestDriver
- --compare-ogr ${EPSILON_3}
- ${BASELINE_FILES}/bfTvNDVIDataNodeFeatureFunctionOutput_Polygon.shp
- ${TEMP}/bfTvNDVIDataNodeFeatureFunctionOutput_Polygon.shp
- otbNDVIDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_BUILDINGS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvNDVIDataNodeFeatureFunctionOutput_Polygon.shp
- 0
- )
-
-otb_add_test(NAME bfTvNDVIDataNodeFeatureFunction_Line COMMAND otbIndicesTestDriver
- --compare-ogr ${EPSILON_9}
- ${BASELINE_FILES}/bfTvNDVIDataNodeFeatureFunctionOutput_Line.shp
- ${TEMP}/bfTvNDVIDataNodeFeatureFunctionOutput_Line.shp
- otbNDVIDataNodeFeatureFunction
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE_ROADS.shp
- ${INPUTDATA}/Dempster-Shafer/ROI_QB_TOULOUSE.TIF
- ${INPUTDATA}/DEM/srtm_directory
- ${TEMP}/bfTvNDVIDataNodeFeatureFunctionOutput_Line.shp
- 0
- )
-
-
otb_add_test(NAME raTvLandsatTMIndexNDSITest COMMAND otbIndicesTestDriver
otbLandsatTMIndexNDSI
3 #TM1
diff --git a/Modules/Radiometry/Indices/test/otbIndicesTestDriver.cxx b/Modules/Radiometry/Indices/test/otbIndicesTestDriver.cxx
index 884ebeabb10bac520f40d10336bd96aec25b5b93..111d5c05d0978f86930a277975e37ebd58393533 100644
--- a/Modules/Radiometry/Indices/test/otbIndicesTestDriver.cxx
+++ b/Modules/Radiometry/Indices/test/otbIndicesTestDriver.cxx
@@ -22,7 +22,6 @@
void RegisterTests()
{
- REGISTER_TEST(otbNDVIDataNodeFeatureFunction);
REGISTER_TEST(otbLandsatTMIndexNDSI);
REGISTER_TEST(otbLandsatTMIndexBIO);
REGISTER_TEST(otbLandsatTMIndexMIR2);
diff --git a/Modules/Radiometry/Indices/test/otbNDVIDataNodeFeatureFunction.cxx b/Modules/Radiometry/Indices/test/otbNDVIDataNodeFeatureFunction.cxx
deleted file mode 100644
index 18289e76d7a4468aa04fa1057adca4764c42013c..0000000000000000000000000000000000000000
--- a/Modules/Radiometry/Indices/test/otbNDVIDataNodeFeatureFunction.cxx
+++ /dev/null
@@ -1,129 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-
-
-#include "otbNDVIDataNodeFeatureFunction.h"
-
-#include "otbVectorImage.h"
-#include "otbImageFileReader.h"
-#include "otbVectorData.h"
-#include "otbVectorDataFileReader.h"
-#include "otbVectorDataIntoImageProjectionFilter.h"
-#include "otbVectorDataFileWriter.h"
-#include "itkPreOrderTreeIterator.h"
-
-
-int otbNDVIDataNodeFeatureFunction(int itkNotUsed(argc), char* argv[])
-{
- const char * inputVD = argv[1];
- const char * inputImg = argv[2];
- const char * DEMDir = argv[3];
- const char * outputVD = argv[4];
- int DisplayWarnings = atoi(argv[5]);
-
- typedef double CoordRepType;
- typedef double PrecisionType;
- typedef otb::VectorImage<PrecisionType> ImageType;
- typedef otb::ImageFileReader<ImageType> ImageReaderType;
- typedef otb::VectorData<CoordRepType, 2, PrecisionType>
- VectorDataType;
- typedef VectorDataType::DataNodeType DataNodeType;
- typedef otb::VectorDataFileReader<VectorDataType> VectorDataReaderType;
- typedef otb::VectorDataIntoImageProjectionFilter<VectorDataType, ImageType>
- VectorDataReProjFilter;
- typedef otb::VectorDataFileWriter<VectorDataType> VectorDataWriterType;
- typedef itk::PreOrderTreeIterator<VectorDataType::DataTreeType>
- TreeIteratorType;
-
- typedef otb::NDVIDataNodeFeatureFunction<ImageType, CoordRepType, PrecisionType>
- NDVIDataNodeFeaturefunctionType;
- typedef NDVIDataNodeFeaturefunctionType::OutputType
- NDVIFeatureOutputType;
-
- ImageReaderType::Pointer imgReader = ImageReaderType::New();
- VectorDataReaderType::Pointer vdReader = VectorDataReaderType::New();
- VectorDataReProjFilter::Pointer vdReProjFilter = VectorDataReProjFilter::New();
- VectorDataWriterType::Pointer vdWriter = VectorDataWriterType::New();
- NDVIDataNodeFeaturefunctionType::Pointer NDVIFeatureFunction = NDVIDataNodeFeaturefunctionType::New();
-
- if (!DisplayWarnings)
- {
- imgReader->SetGlobalWarningDisplay(0);
- }
-
- otb::DEMHandler::Instance()->OpenDEMDirectory(DEMDir);
-
- vdReader->SetFileName(inputVD);
- vdReader->Update();
-
- imgReader->SetFileName(inputImg);
- imgReader->UpdateOutputInformation();
- imgReader->Update(); //Needed to set m_EndIndex, m_StartIndex in otbDataNodeImageFunction
-
- vdReProjFilter->SetInputImage(imgReader->GetOutput());
- vdReProjFilter->SetInputVectorData(vdReader->GetOutput());
- vdReProjFilter->SetUseOutputSpacingAndOriginFromImage(true);
- vdReProjFilter->Update();
-/*
- std::cout<< "vdReProjFilter->GetOutput()->Size(): "
- << vdReProjFilter->GetOutput()->Size() << std::endl;
-*/
- NDVIFeatureFunction->SetREDChannelIndex(3);
- NDVIFeatureFunction->SetNIRChannelIndex(4);
- NDVIFeatureFunction->SetNDVIThreshold(0.047);
- NDVIFeatureFunction->SetInputImage(imgReader->GetOutput());
-
- // Output
- VectorDataType::Pointer outVD = VectorDataType::New();
- // Retrieving root node
- DataNodeType::Pointer root = outVD->GetDataTree()->GetRoot()->Get();
- // Create the document node
- DataNodeType::Pointer document = DataNodeType::New();
- document->SetNodeType(otb::DOCUMENT);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(document, root);
- // Create the folder node
- DataNodeType::Pointer folder = DataNodeType::New();
- folder->SetNodeType(otb::FOLDER);
- // Adding the layer to the data tree
- outVD->GetDataTree()->Add(folder, document);
-
- TreeIteratorType itVector(vdReProjFilter->GetOutput()->GetDataTree());
- itVector.GoToBegin();
- while (!itVector.IsAtEnd())
- {
- if (itVector.Get()->IsLineFeature() || itVector.Get()->IsPolygonFeature())
- {
- const DataNodeType::Pointer currentGeometry = itVector.Get();
- NDVIFeatureOutputType currentResult;
- currentResult = NDVIFeatureFunction->Evaluate(*(currentGeometry.GetPointer()));
- currentGeometry->SetFieldAsDouble("NDVI", (double)(currentResult[0]));
- outVD->GetDataTree()->Add(currentGeometry, folder);
- }
- ++itVector;
- }
-
- vdWriter->SetInput(outVD);
- vdWriter->SetFileName(outputVD);
- vdWriter->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/CMakeLists.txt b/Modules/Registration/DisplacementField/CMakeLists.txt
deleted file mode 100644
index a8ad1a8e38bf22af2290f918ff38056abee5ba93..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/CMakeLists.txt
+++ /dev/null
@@ -1,22 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-project(OTBDisplacementField)
-otb_module_impl()
diff --git a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.h
deleted file mode 100644
index 1e219346e5c7c37c4a32ea87b7dd0937d75325f1..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,84 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBSplinesInterpolateDisplacementFieldGenerator_h
-#define otbBSplinesInterpolateDisplacementFieldGenerator_h
-
-#include "otbPointSetToDisplacementFieldGenerator.h"
-
-namespace otb
-{
-/** \class BSplinesInterpolateDisplacementFieldGenerator
- * \brief This filters encapsulate the itk::DisplacementFieldSource to produce a BSpline interpolation of the point in point set whose metric values are
- * sufficient.
- * \sa itk::DisplacementFieldSource
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT BSplinesInterpolateDisplacementFieldGenerator
- : public PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef BSplinesInterpolateDisplacementFieldGenerator Self;
- typedef PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(BSplinesInterpolateDisplacementFieldGenerator, PointSetToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::PointType PointType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
- typedef typename Superclass::DistanceVectorType DistanceVectorType;
-
-protected:
- /** Constructor */
- BSplinesInterpolateDisplacementFieldGenerator() {};
- /** Destructor */
- ~BSplinesInterpolateDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
-private:
- BSplinesInterpolateDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbBSplinesInterpolateDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.hxx
deleted file mode 100644
index 7b12fa7a1881970099fb35781b039856a397d18c..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,132 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBSplinesInterpolateDisplacementFieldGenerator_hxx
-#define otbBSplinesInterpolateDisplacementFieldGenerator_hxx
-
-#include "otbBSplinesInterpolateDisplacementFieldGenerator.h"
-// Disabling deprecation warning if on visual
-#ifdef _MSC_VER
-#pragma warning(push)
-#pragma warning(disable:4996)
-#endif
-#include "itkLandmarkDisplacementFieldSource.h"
-// Enabling remaining deprecation warning
-#ifdef _MSC_VER
-#pragma warning(pop)
-#endif
-#include "otbMacro.h"
-#include "otbImage.h"
-#include "itkImageRegionIterator.h"
-
-namespace otb
-{
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- typedef itk::Vector<ValueType, 2> VectorType;
- typedef otb::Image<VectorType, DisplacementFieldType::ImageDimension> ImageType;
- typedef itk::LandmarkDisplacementFieldSource<ImageType> DisplacementFieldSourceType;
- typedef typename DisplacementFieldSourceType::LandmarkContainer LandmarkContainerType;
- typedef typename DisplacementFieldSourceType::LandmarkPointType LandmarkPointType;
- typedef typename PointSetType::PointsContainer PointsContainer;
- typedef typename PointsContainer::ConstIterator PointsIterator;
- typedef typename PointSetType::PointDataContainer PointDataContainer;
- typedef typename PointDataContainer::ConstIterator PointDataIterator;
-
- typename LandmarkContainerType::Pointer sourceLandmarks = LandmarkContainerType::New();
- typename LandmarkContainerType::Pointer targetLandmarks = LandmarkContainerType::New();
- LandmarkPointType sourcePoint;
- LandmarkPointType targetPoint;
-
- PointsIterator pointIterator = this->GetPointSet()->GetPoints()->Begin();
- PointsIterator end = this->GetPointSet()->GetPoints()->End();
- unsigned int pointId = 0;
-
- PointDataIterator pointDataIterator = this->GetPointSet()->GetPointData()->Begin();
-
- while (pointIterator != end)
- {
- typename PointDataContainer::Element valueAndDisplacements = pointDataIterator.Value();
-
- if (std::abs(valueAndDisplacements[0]) >= this->GetMetricThreshold())
- {
- typename PointSetType::PointType p = pointIterator.Value(); // access the point
- sourcePoint[0] = p[0];
- sourcePoint[1] = p[1];
- targetPoint[0] = p[0] - valueAndDisplacements[1];
- targetPoint[1] = p[1] - valueAndDisplacements[2];
- otbMsgDebugMacro(
- << "Adding landmark " << pointId << ", source point: " << sourcePoint << ", targetpoint: " << targetPoint);
- sourceLandmarks->InsertElement(pointId, sourcePoint);
- targetLandmarks->InsertElement(pointId, targetPoint);
- ++pointId;
- }
- ++pointIterator;
- ++pointDataIterator;
- }
-
- typename DisplacementFieldSourceType::Pointer deformer = DisplacementFieldSourceType::New();
- deformer->SetOutputSpacing(this->GetOutputSpacing());
- deformer->SetOutputOrigin(this->GetOutputOrigin());
- deformer->SetOutputRegion(outputPtr->GetRequestedRegion());
- deformer->SetSourceLandmarks(sourceLandmarks.GetPointer());
- deformer->SetTargetLandmarks(targetLandmarks.GetPointer());
-
- deformer->Update();
- outputPtr->Allocate();
- PixelType defaultPixel;
- defaultPixel.SetSize(2);
- defaultPixel.Fill(this->GetDefaultValue());
- outputPtr->FillBuffer(defaultPixel);
- typedef itk::ImageRegionIterator<ImageType> ImageIteratorType;
- typedef itk::ImageRegionIterator<DisplacementFieldType> OutputIteratorType;
-
- ImageIteratorType inIt(deformer->GetOutput(), outputPtr->GetRequestedRegion());
- OutputIteratorType outIt(outputPtr, outputPtr->GetRequestedRegion());
- int i = 0;
- // Casting otb::Image<itt::Vector<ValueType, 2>, 2> to otb::VectorImage<ValueType, 2>
- for (inIt.GoToBegin(), outIt.GoToBegin(); (!inIt.IsAtEnd()) && (!outIt.IsAtEnd()); ++inIt, ++outIt, ++i)
- {
- typename ImageType::PixelType inPixel;
- inPixel = inIt.Get();
- PixelType outPixel;
- outPixel.SetSize(2);
- outPixel[0] = -inPixel[0];
- outPixel[1] = -inPixel[1];
- outIt.Set(outPixel);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.h
deleted file mode 100644
index 6528f55931f87ffab35c48cd7c806495ed13caba..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,138 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBSplinesInterpolateTransformDisplacementFieldGenerator_h
-#define otbBSplinesInterpolateTransformDisplacementFieldGenerator_h
-
-#include "otbPointSetWithTransformToDisplacementFieldGenerator.h"
-#include "itkUnaryFunctorImageFilter.h"
-#include "itkBSplineScatteredDataPointSetToImageFilter.h"
-#include "itkBSplineControlPointImageFunction.h"
-#include "otbImage.h"
-#include "otbMath.h"
-#include <complex>
-
-namespace otb
-{
-/** \class BSplinesInterpolateTransformDisplacementFieldGenerator
- * \brief This class generate the displacement field by using spline interpolation on the parameters of the transform.
- *
- * Spline interpolation of non regularly scattered data is provided
- * by the itk::BSplineScatteredDataPointSetToImageFilter. It allows interpolation using any spline order and implements a multi-level approach.
- *
- * This filter is used for each parameter. One can also specify the indices of the angular parameters. Angular parameters are first
- * converted to complex exponential, the interpolated and converted back to the angular space. This is done to avoid interpolating angular discontinuities,
- * which is a non-sense.
- *
- * \sa itk::BSplineScatteredDataPointSetToImageFilter
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT BSplinesInterpolateTransformDisplacementFieldGenerator
- : public PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef BSplinesInterpolateTransformDisplacementFieldGenerator Self;
- typedef PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(BSplinesInterpolateTransformDisplacementFieldGenerator, PointSetWithTransformsToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::PointType PointType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
- typedef typename Superclass::DistanceVectorType DistanceVectorType;
- typedef typename Superclass::ParametersType ParametersType;
-
- /** Filters definition */
- typedef itk::Vector<ValueType, 2> PointSetDataType;
- typedef otb::Image<PointSetDataType, DisplacementFieldType::ImageDimension> InternalImageType;
- typedef itk::PointSet<PointSetDataType, PointSetType::PointDimension> InternalPointSetType;
- typedef itk::BSplineScatteredDataPointSetToImageFilter<InternalPointSetType, InternalImageType>
- SPlineInterpolateFilterType;
- typedef typename SPlineInterpolateFilterType::Pointer SPlineInterpolateFilterPointerType;
- typedef itk::BSplineControlPointImageFunction<InternalImageType> BSplinerType;
-
- /**
- * Add an angular parameter. Angular parameters are transformed by complex exponential during interpolation so as to avoid discontinuity.
- * \param index The index of the angular parameter.
- */
- void AddAngularParameter(unsigned int index);
- /**
- * Remove an angular parameter.
- * \param index The index of the angular parameter.
- */
- void RemoveAngularParameter(unsigned int index);
-
- itkSetMacro(SplineOrder, unsigned int);
- itkGetMacro(SplineOrder, unsigned int);
- itkSetMacro(NumberOfControlPoints, unsigned int);
- itkGetMacro(NumberOfControlPoints, unsigned int);
- itkSetMacro(NumberOfLevels, unsigned int);
- itkGetMacro(NumberOfLevels, unsigned int);
-
-protected:
- /** Constructor */
- BSplinesInterpolateTransformDisplacementFieldGenerator();
- /** Destructor */
- ~BSplinesInterpolateTransformDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
- void GenerateOutputInformation() override;
-
- /**
- * Test whether a parameter is angular or not.
- * \param index The index of the parameter to test.
- */
- bool IsAngular(unsigned int index);
-
-private:
- BSplinesInterpolateTransformDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- IndexVectorType m_AngularParameters;
-
- unsigned int m_SplineOrder;
- unsigned int m_NumberOfControlPoints;
- unsigned int m_NumberOfLevels;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbBSplinesInterpolateTransformDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.hxx
deleted file mode 100644
index 6d370825ef6140eead474b2ea98f6cd8f1ae2677..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbBSplinesInterpolateTransformDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,207 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbBSplinesInterpolateTransformDisplacementFieldGenerator_hxx
-#define otbBSplinesInterpolateTransformDisplacementFieldGenerator_hxx
-
-#include "otbBSplinesInterpolateTransformDisplacementFieldGenerator.h"
-#include "itkLandmarkDisplacementFieldSource.h"
-#include "otbObjectList.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-template <class TPointSet, class TDisplacementField>
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::BSplinesInterpolateTransformDisplacementFieldGenerator()
-{
- m_SplineOrder = 3;
- m_NumberOfControlPoints = 4;
- m_NumberOfLevels = 6;
-}
-
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateOutputInformation()
-{
- Superclass::GenerateOutputInformation();
- this->GetOutput()->SetNumberOfComponentsPerPixel(2);
-}
-
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
-
- // Default displacement field
- PixelType defaultValue(2);
- defaultValue.Fill(this->GetDefaultValue());
- outputPtr->Allocate();
- outputPtr->FillBuffer(defaultValue);
-
- typedef otb::ObjectList<BSplinerType> SPlineInterpolatorListType;
- typedef typename PointSetType::PointsContainer::ConstIterator PointSetIteratorType;
-
- // Initialization of the splines interpolator
- typename SPlineInterpolatorListType::Pointer splineIntList = SPlineInterpolatorListType::New();
-
- for (unsigned int paramIndex = 0; paramIndex < this->GetTransform()->GetNumberOfParameters(); ++paramIndex)
- {
- // Create a new interpolator
- splineIntList->PushBack(BSplinerType::New());
- // Create a new point set
- typename InternalPointSetType::Pointer tmpPointSet = InternalPointSetType::New();
- tmpPointSet->Initialize();
- unsigned int pointDataCounter = 0;
- for (PointSetIteratorType it = this->GetPointSet()->GetPoints()->Begin();
- it != this->GetPointSet()->GetPoints()->End();
- ++it)
- {
- if (std::abs(this->GetPointSet()->GetPointData()->GetElement(pointDataCounter)[0]) >= this->GetMetricThreshold())
- {
- typename InternalPointSetType::PixelType V(0.0);
-
- if (!IsAngular(paramIndex))
- {
- V[0] = this->GetPointSet()->GetPointData()->GetElement(pointDataCounter)[paramIndex + 3];
- V[1] = this->GetPointSet()->GetPointData()->GetElement(pointDataCounter)[paramIndex + 3];
- }
- else
- {
- V[0] =
- static_cast<ValueType>(std::cos(this->GetPointSet()->GetPointData()->GetElement(pointDataCounter)[paramIndex
- + 3]));
- V[1] =
- static_cast<ValueType>(std::sin(this->GetPointSet()->GetPointData()->GetElement(pointDataCounter)[paramIndex
- + 3]));
- }
- unsigned long nbPoints = tmpPointSet->GetNumberOfPoints();
- tmpPointSet->SetPoint(nbPoints, it.Value());
- tmpPointSet->SetPointData(nbPoints, V);
- }
- ++pointDataCounter;
- }
-
- SPlineInterpolateFilterPointerType splineFilter = SPlineInterpolateFilterType::New();
-
- // Set the interpolator parameters
- splineFilter->SetInput(tmpPointSet);
- splineFilter->SetSplineOrder(m_SplineOrder);
- typename SPlineInterpolateFilterType::ArrayType ncps;
- ncps.Fill(m_NumberOfControlPoints);
- splineFilter->SetNumberOfControlPoints(ncps);
- splineFilter->SetNumberOfLevels(m_NumberOfLevels);
- // splineFilter->SetGenerateOutputImage(false);
-
- // Define the parametric domain.
- splineFilter->SetOrigin(this->GetOutput()->GetOrigin());
- splineFilter->SetSpacing(this->GetOutput()->GetSpacing());
- splineFilter->SetSize(this->GetOutput()->GetLargestPossibleRegion().GetSize());
- splineFilter->Update();
-
- // Image function
- splineIntList->Back()->SetSplineOrder( splineFilter->GetSplineOrder() );
- splineIntList->Back()->SetSize( splineFilter->GetSize() );
- splineIntList->Back()->SetSpacing( splineFilter->GetSpacing() );
- splineIntList->Back()->SetOrigin( splineFilter->GetOrigin() );
- splineIntList->Back()->SetInputImage( static_cast<const InternalImageType*>(splineFilter->GetPhiLattice().GetPointer()) );
- }
-
- // Interpolation
- typedef itk::ImageRegionIteratorWithIndex<DisplacementFieldType> IteratorType;
- IteratorType outIt(outputPtr, outputPtr->GetRequestedRegion());
-
- // main loop
- for (outIt.GoToBegin(); !outIt.IsAtEnd(); ++outIt)
- {
- // Index of the pixel
- IndexType index = outIt.GetIndex();
- // parameters vector
- ParametersType params(this->GetTransform()->GetNumberOfParameters());
- // we iterate over the number of parameters of the transform
- for (unsigned int paramIndex = 0; paramIndex < this->GetTransform()->GetNumberOfParameters(); ++paramIndex)
- {
- typename InternalPointSetType::PointType p;
- this->GetOutput()->TransformIndexToPhysicalPoint(index, p);
- typename InternalPointSetType::PixelType V(0.0);
- // For each parameter we use the associated spline interpolator
- if (!IsAngular(paramIndex))
- {
- V = splineIntList->GetNthElement(paramIndex)->EvaluateAtParametricPoint(p);
- params[paramIndex] = V[0];
- }
- else
- {
- V = splineIntList->GetNthElement(paramIndex)->EvaluateAtParametricPoint(p);
- params[paramIndex] = std::atan2(V[1], V[0]);
- }
- // We then compute the target point using the transform
- this->GetTransform()->SetParameters(params);
- PointType sourcePoint, targetPoint;
- outputPtr->TransformIndexToPhysicalPoint(index, sourcePoint);
- targetPoint = this->GetTransform()->TransformPoint(sourcePoint);
-
- // And the displacement
- PixelType pixel;
- pixel.SetSize(2);
- pixel[0] = static_cast<ValueType>(targetPoint[0] - sourcePoint[0]);
- pixel[1] = static_cast<ValueType>(targetPoint[1] - sourcePoint[1]);
- outIt.Set(pixel);
- }
- }
-}
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::AddAngularParameter(unsigned int index)
-{
- m_AngularParameters.push_back(index);
-}
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::RemoveAngularParameter(unsigned int index)
-{
- m_AngularParameters.erase(index);
-}
-template <class TPointSet, class TDisplacementField>
-bool
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::IsAngular(unsigned int index)
-{
- bool resp = std::binary_search(m_AngularParameters.begin(), m_AngularParameters.end(), index);
- return resp;
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-BSplinesInterpolateTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.h
deleted file mode 100644
index ab4f9d62f4f0a5f0d59b208bf584d7a7050619e9..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,87 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNNearestPointsLinearInterpolateDisplacementFieldGenerator_h
-#define otbNNearestPointsLinearInterpolateDisplacementFieldGenerator_h
-
-#include "otbPointSetToDisplacementFieldGenerator.h"
-
-namespace otb
-{
-/** \class NNearestPointsLinearInterpolateDisplacementFieldGenerator
- * \brief This class generate the displacement field by performing a linear interpolation of the displacement induced by the n nearest point.
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT NNearestPointsLinearInterpolateDisplacementFieldGenerator
- : public PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef NNearestPointsLinearInterpolateDisplacementFieldGenerator Self;
- typedef PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NNearestPointsLinearInterpolateDisplacementFieldGenerator, PointSetToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::PointType PointType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
- typedef typename Superclass::DistanceVectorType DistanceVectorType;
-
- itkSetMacro(NumberOfPoints, unsigned int);
- itkGetMacro(NumberOfPoints, unsigned int);
-
-protected:
- /** Constructor */
- NNearestPointsLinearInterpolateDisplacementFieldGenerator() {};
- /** Destructor */
- ~NNearestPointsLinearInterpolateDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
-private:
- NNearestPointsLinearInterpolateDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- unsigned int m_NumberOfPoints;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.hxx
deleted file mode 100644
index 873bca0b2efbf8f4588c634043bba2b004c5b534..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,95 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNNearestPointsLinearInterpolateDisplacementFieldGenerator_hxx
-#define otbNNearestPointsLinearInterpolateDisplacementFieldGenerator_hxx
-
-#define EPSILON 1e-15
-
-#include "otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.h"
-#include "itkImageRegionIteratorWithIndex.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-NNearestPointsLinearInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- PixelType defaultValue(2);
- defaultValue.Fill(this->GetDefaultValue());
- outputPtr->Allocate();
- outputPtr->FillBuffer(defaultValue);
-
- typedef itk::ImageRegionIteratorWithIndex<DisplacementFieldType> IteratorType;
- IteratorType it(outputPtr, outputPtr->GetRequestedRegion());
-
- for (it.GoToBegin(); !it.IsAtEnd(); ++it)
- {
- IndexType index = it.GetIndex();
- IndexVectorType indexVector = this->GenerateNearestValidPointsPointSet(it.GetIndex(), m_NumberOfPoints);
- PixelType pixel(2);
- double xdisplacement, ydisplacement, normalization;
- xdisplacement = 0;
- ydisplacement = 0;
- normalization = 0;
-
- for (typename IndexVectorType::iterator indexIt = indexVector.begin(); indexIt != indexVector.end(); ++indexIt)
- {
- PointType point;
- point[0] = static_cast<double>(this->GetPointSet()->GetPoints()->GetElement(*indexIt)[0]);
- point[1] = static_cast<double>(this->GetPointSet()->GetPoints()->GetElement(*indexIt)[1]);
- double distance = this->EuclideanDistanceMetric(index, point);
- if (distance < EPSILON)
- {
- distance = EPSILON;
- }
- xdisplacement += this->GetPointSet()->GetPointData()->GetElement((*indexIt))[1] / distance;
- ydisplacement += this->GetPointSet()->GetPointData()->GetElement((*indexIt))[2] / distance;
- normalization += 1 / distance;
- }
-
- if (normalization > 0)
- {
- pixel[0] = static_cast<ValueType>(xdisplacement / normalization);
- pixel[1] = static_cast<ValueType>(ydisplacement / normalization);
- }
- else
- {
- pixel = defaultValue;
- }
- it.Set(pixel);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-NNearestPointsLinearInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.h
deleted file mode 100644
index 7ab027e0135ab84a80c67be3c8c76117d9283aa4..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,94 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator_h
-#define otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator_h
-
-#include "otbPointSetWithTransformToDisplacementFieldGenerator.h"
-
-namespace otb
-{
-/** \class NNearestTransformsLinearInterpolateDisplacementFieldGenerator
- * \brief generate the displacement field by performing a linear interpolation
- *
- * This class generate the displacement field by performing a linear interpolation of
- * the displacements from the transforms induced by the n nearest points.
- *
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT NNearestTransformsLinearInterpolateDisplacementFieldGenerator
- : public PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef NNearestTransformsLinearInterpolateDisplacementFieldGenerator Self;
- typedef PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NNearestTransformsLinearInterpolateDisplacementFieldGenerator,
- PointSetWithTransformsToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::PointType PointType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
- typedef typename Superclass::DistanceVectorType DistanceVectorType;
- typedef typename Superclass::TransformType TransformType;
- typedef typename TransformType::ParametersType ParametersType;
-
- itkSetMacro(NumberOfPoints, unsigned int);
- itkGetMacro(NumberOfPoints, unsigned int);
-
-protected:
- /** Constructor */
- NNearestTransformsLinearInterpolateDisplacementFieldGenerator() {};
- /** Destructor */
- ~NNearestTransformsLinearInterpolateDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
-private:
- NNearestTransformsLinearInterpolateDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- unsigned int m_NumberOfPoints;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.hxx
deleted file mode 100644
index dabb7ab6ded475512374a0794b65724fffb3b42b..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator_hxx
-#define otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator_hxx
-
-#define EPSILON 1e-15
-
-#include "otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.h"
-#include "itkImageRegionIteratorWithIndex.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-NNearestTransformsLinearInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- PixelType defaultValue(2);
- defaultValue.Fill(this->GetDefaultValue());
- outputPtr->Allocate();
- outputPtr->FillBuffer(defaultValue);
-
- typedef itk::ImageRegionIteratorWithIndex<DisplacementFieldType> IteratorType;
- IteratorType it(outputPtr, outputPtr->GetRequestedRegion());
-
- for (it.GoToBegin(); !it.IsAtEnd(); ++it)
- {
- IndexType index = it.GetIndex();
- IndexVectorType indexVector = this->GenerateNearestValidPointsPointSet(it.GetIndex(), m_NumberOfPoints);
- PixelType pixel(2);
- double xdisplacement, ydisplacement, normalization;
- xdisplacement = 0;
- ydisplacement = 0;
- normalization = 0;
-
- for (typename IndexVectorType::iterator indexIt = indexVector.begin(); indexIt != indexVector.end(); ++indexIt)
- {
- PointType point;
- point[0] = static_cast<double>(this->GetPointSet()->GetPoints()->GetElement(*indexIt)[0]);
- point[1] = static_cast<double>(this->GetPointSet()->GetPoints()->GetElement(*indexIt)[1]);
- double distance = this->EuclideanDistanceMetric(index, point);
- if (distance < EPSILON)
- {
- distance = EPSILON;
- }
-
- ParametersType params(this->GetTransform()->GetNumberOfParameters());
- for (unsigned int i = 0; i < this->GetTransform()->GetNumberOfParameters(); ++i)
- {
- params[i] = this->GetPointSet()->GetPointData()->GetElement((*indexIt))[i + 3];
- }
- this->GetTransform()->SetParameters(params);
- PointType sourcePoint, targetPoint;
-
- outputPtr->TransformIndexToPhysicalPoint(it.GetIndex(), sourcePoint);
- targetPoint = this->GetTransform()->TransformPoint(sourcePoint);
- xdisplacement += (targetPoint[0] - sourcePoint[0]) / distance;
- ydisplacement += (targetPoint[1] - sourcePoint[1]) / distance;
- normalization += 1 / distance;
- }
-
- if (normalization > 0)
- {
- pixel[0] = static_cast<ValueType>(xdisplacement / normalization);
- pixel[1] = static_cast<ValueType>(ydisplacement / normalization);
- }
- else
- {
- pixel = defaultValue;
- }
- it.Set(pixel);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-NNearestTransformsLinearInterpolateDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.h
deleted file mode 100644
index 158e21b2c13b79a65d8a1217ae3f75134c8da972..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,82 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNearestPointDisplacementFieldGenerator_h
-#define otbNearestPointDisplacementFieldGenerator_h
-
-#include "otbPointSetToDisplacementFieldGenerator.h"
-
-namespace otb
-{
-/** \class NearestPointDisplacementFieldGenerator
- * \brief This class implements the simplest way to displacement field generation using a point set.
- * In each pixel location, the displacement is considered to be the displacement of the nearest seed point in the point set.
- *
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT NearestPointDisplacementFieldGenerator
- : public PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef NearestPointDisplacementFieldGenerator Self;
- typedef PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NearestPointDisplacementFieldGenerator, PointSetToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
-
-protected:
- /** Constructor */
- NearestPointDisplacementFieldGenerator() {};
- /** Destructor */
- ~NearestPointDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
-private:
- NearestPointDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNearestPointDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.hxx
deleted file mode 100644
index f7194ec39aa8364311fcd003859497361bece1f7..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNearestPointDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,72 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNearestPointDisplacementFieldGenerator_hxx
-#define otbNearestPointDisplacementFieldGenerator_hxx
-
-#include "otbNearestPointDisplacementFieldGenerator.h"
-#include "itkImageRegionIteratorWithIndex.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-NearestPointDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- PixelType defaultValue(2);
- defaultValue.Fill(this->GetDefaultValue());
- outputPtr->Allocate();
- outputPtr->FillBuffer(defaultValue);
-
- typedef itk::ImageRegionIteratorWithIndex<DisplacementFieldType> IteratorType;
- IteratorType it(outputPtr, outputPtr->GetRequestedRegion());
-
- for (it.GoToBegin(); !it.IsAtEnd(); ++it)
- {
- IndexVectorType indexVector = this->GenerateNearestValidPointsPointSet(it.GetIndex(), 1);
- PixelType p(2);
- if (indexVector.size() >= 1)
- {
- p[0] = static_cast<ValueType>(this->GetPointSet()->GetPointData()->GetElement(indexVector[0])[1]);
- p[1] = static_cast<ValueType>(this->GetPointSet()->GetPointData()->GetElement(indexVector[0])[2]);
- }
- else
- {
- p = defaultValue;
- }
- it.Set(p);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-NearestPointDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.h
deleted file mode 100644
index 6f4f907802a1b67017396b41c3674e74b95043a0..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,85 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNearestTransformDisplacementFieldGenerator_h
-#define otbNearestTransformDisplacementFieldGenerator_h
-
-#include "otbPointSetWithTransformToDisplacementFieldGenerator.h"
-
-namespace otb
-{
-/** \class NearestTransformDisplacementFieldGenerator
- * \brief This class implements displacement field generation by taking into account the local transform of the
- * nearest point in pointset.
- *
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT NearestTransformDisplacementFieldGenerator
- : public PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef NearestTransformDisplacementFieldGenerator Self;
- typedef PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(NearestTransformDisplacementFieldGenerator, PointSetWithTransformToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef typename Superclass::PointSetType PointSetType;
- typedef typename Superclass::PointSetPointerType PointSetPointerType;
- typedef typename Superclass::DisplacementFieldType DisplacementFieldType;
- typedef typename Superclass::DisplacementFieldPointerType DisplacementFieldPointerType;
- typedef typename Superclass::IndexType IndexType;
- typedef typename Superclass::PointType PointType;
- typedef typename DisplacementFieldType::PixelType PixelType;
- typedef typename Superclass::ValueType ValueType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
- typedef typename Superclass::TransformType TransformType;
- typedef typename TransformType::ParametersType ParametersType;
-
-protected:
- /** Constructor */
- NearestTransformDisplacementFieldGenerator() {};
- /** Destructor */
- ~NearestTransformDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Main computation method */
- void GenerateData() override;
-
-private:
- NearestTransformDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbNearestTransformDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.hxx
deleted file mode 100644
index e43b4fe7da8daf535e3650bb663fa69b4893f56b..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbNearestTransformDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,82 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbNearestTransformDisplacementFieldGenerator_hxx
-#define otbNearestTransformDisplacementFieldGenerator_hxx
-
-#include "otbNearestTransformDisplacementFieldGenerator.h"
-#include "itkImageRegionIteratorWithIndex.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/** Main computation method */
-template <class TPointSet, class TDisplacementField>
-void
-NearestTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateData(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- PixelType defaultValue(2);
- defaultValue.Fill(this->GetDefaultValue());
- outputPtr->Allocate();
- outputPtr->FillBuffer(defaultValue);
-
- typedef itk::ImageRegionIteratorWithIndex<DisplacementFieldType> IteratorType;
- IteratorType it(outputPtr, outputPtr->GetRequestedRegion());
-
- for (it.GoToBegin(); !it.IsAtEnd(); ++it)
- {
- IndexVectorType indexVector = this->GenerateNearestValidPointsPointSet(it.GetIndex(), 1);
- PixelType pixel(2);
- if (indexVector.size() >= 1)
- {
- ParametersType params(this->GetTransform()->GetNumberOfParameters());
- for (unsigned int i = 0; i < this->GetTransform()->GetNumberOfParameters(); ++i)
- {
- params[i] = this->GetPointSet()->GetPointData()->GetElement(indexVector[0])[i + 3];
- }
- this->GetTransform()->SetParameters(params);
- PointType sourcePoint, targetPoint;
-
- outputPtr->TransformIndexToPhysicalPoint(it.GetIndex(), sourcePoint);
- targetPoint = this->GetTransform()->TransformPoint(sourcePoint);
- pixel[0] = static_cast<ValueType>(targetPoint[0] - sourcePoint[0]);
- pixel[1] = static_cast<ValueType>(targetPoint[1] - sourcePoint[1]);
- }
- else
- {
- pixel = defaultValue;
- }
- it.Set(pixel);
- }
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-NearestTransformDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.h
deleted file mode 100644
index 9624d8ebe16f1af7108870cfe13f54f3da8c2cd3..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,166 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPointSetToDisplacementFieldGenerator_h
-#define otbPointSetToDisplacementFieldGenerator_h
-
-#include "itkImageSource.h"
-
-namespace otb
-{
-namespace Functor
-{
-/** \class DistanceComparisonFunctor
- * \brief This functor is used in nearest neighborhood sorting.
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-class DistanceComparisonFunctor
-{
-public:
- DistanceComparisonFunctor() {}
- virtual ~DistanceComparisonFunctor() {}
- typedef std::vector<double> DistanceVectorType;
-
- void SetDistanceVector(DistanceVectorType& vec)
- {
- m_DistanceVector = vec;
- }
- DistanceVectorType GetDistanceVector(void)
- {
- return m_DistanceVector;
- }
- inline bool operator ()(const unsigned int a1, const unsigned int a2)
- {
- return m_DistanceVector[a1] < m_DistanceVector[a2];
- }
-
-private:
- DistanceVectorType m_DistanceVector;
-};
-}
-/** \class PointSetToDisplacementFieldGenerator
- * \brief Base class for filters generating a displacement field from a point set enriched with displacement and local transform information.
- * The output of the filters deriving from this base class can be passed to the itk::WarpImageFilter for image resampling.
- * \sa DisparityMapEstimationMethod
- * \sa itk::WarpImageFilter
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT PointSetToDisplacementFieldGenerator
- : public itk::ImageSource<TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef PointSetToDisplacementFieldGenerator Self;
- typedef itk::ImageSource<TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(PointSetToDisplacementFieldGenerator, ImageSource);
-
- /** Template parameters typedefs */
- typedef TPointSet PointSetType;
- typedef typename PointSetType::Pointer PointSetPointerType;
-
- typedef TDisplacementField DisplacementFieldType;
- typedef typename DisplacementFieldType::Pointer DisplacementFieldPointerType;
- typedef typename DisplacementFieldType::IndexType IndexType;
- typedef typename DisplacementFieldType::SizeType SizeType;
- typedef typename DisplacementFieldType::SpacingType SpacingType;
- typedef typename DisplacementFieldType::PointType PointType;
- typedef typename DisplacementFieldType::InternalPixelType ValueType;
-
- /** More typedefs */
- typedef std::vector<double> DistanceVectorType;
- typedef std::vector<unsigned int> IndexVectorType;
-
- /**
- * Set the pointset containing the disparity.
- * \param pointset The pointset containing the disparity.
- */
- void SetPointSet(const TPointSet * pointset);
- /**
- * Get the pointset containing the disparity.
- * \return The pointset containing the disparity.
- */
- const TPointSet * GetPointSet(void);
-
- itkSetMacro(MetricThreshold, double);
- itkGetMacro(MetricThreshold, double);
- itkSetMacro(DefaultValue, ValueType);
- itkGetMacro(DefaultValue, ValueType);
- itkSetMacro(OutputSize, SizeType);
- itkGetConstReferenceMacro(OutputSize, SizeType);
- itkSetMacro(OutputSpacing, SpacingType);
- itkGetConstReferenceMacro(OutputSpacing, SpacingType);
- itkSetMacro(OutputOrigin, PointType);
- itkGetConstReferenceMacro(OutputOrigin, PointType);
-
-protected:
- /** Constructor */
- PointSetToDisplacementFieldGenerator();
- /** Destructor */
- ~PointSetToDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
- /** Generate output information */
- void GenerateOutputInformation(void) override;
- /**
- * Generate the n nearest valid point in point set, where a valid point has a sufficient metric value.
- * \param index The index of the pixel to compute.
- * \param n The number of nearest point to seek.
- * \return A vector containing the index of the nearest point from nearest to most far.
- */
- IndexVectorType GenerateNearestValidPointsPointSet(IndexType index, unsigned int n = 1);
-
- /** Euclidean distance of point to index */
- double EuclideanDistanceMetric(IndexType index, PointType p);
-
-private:
- PointSetToDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /**
- * The threshold of metric value.
- */
- double m_MetricThreshold;
- /** The output size */
- SizeType m_OutputSize;
- /** The output spacing. */
- SpacingType m_OutputSpacing;
- /** The output origin */
- PointType m_OutputOrigin;
- /** Default value */
- ValueType m_DefaultValue;
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbPointSetToDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.hxx
deleted file mode 100644
index f0b69603156bf68220c8bb698ea2bcfabcd894c3..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbPointSetToDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,157 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPointSetToDisplacementFieldGenerator_hxx
-#define otbPointSetToDisplacementFieldGenerator_hxx
-
-#include "otbPointSetToDisplacementFieldGenerator.h"
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPointSet, class TDisplacementField>
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PointSetToDisplacementFieldGenerator()
-{
- this->SetNumberOfRequiredInputs(1);
- m_MetricThreshold = 0.;
- m_OutputSize.Fill(100);
- m_OutputSpacing.Fill(1.);
- m_OutputOrigin.Fill(0.);
- m_DefaultValue = 0;
-// m_NearestPoints = PointSetType::New();
-}
-/**
- * Set the pointset containing the disparity.
- * \param pointset The pointset containing the disparity.
- */
-template <class TPointSet, class TDisplacementField>
-void
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::SetPointSet(const TPointSet * pointset)
-{
- this->itk::ProcessObject::SetNthInput(0, const_cast<PointSetType *>(pointset));
-}
-/**
- * Get the pointset containing the disparity.
- * \return The pointset containing the disparity.
- */
-template <class TPointSet, class TDisplacementField>
-const TPointSet *
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GetPointSet(void)
-{
- return static_cast<const PointSetType *>(this->itk::ProcessObject::GetInput(0));
-}
-/** Generate output information */
-template <class TPointSet, class TDisplacementField>
-void
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateOutputInformation(void)
-{
- DisplacementFieldPointerType outputPtr = this->GetOutput();
- typename DisplacementFieldType::RegionType largest;
- largest.SetSize(m_OutputSize);
- IndexType index;
- index.Fill(0);
- largest.SetIndex(index);
- outputPtr->SetRegions(largest);
- outputPtr->SetSignedSpacing(m_OutputSpacing);
- outputPtr->SetOrigin(m_OutputOrigin);
- // Force the displacement field to have vector pixel of size 2.
- outputPtr->SetNumberOfComponentsPerPixel(2);
-}
-/**
- * Generate the n nearest point in point set
- * \param index The index of the pixel to compute.
- * \param n The number of nearest point to seek.
- * \return A vector containing the index of the nearest point from nearest to most far.
- */
-template <class TPointSet, class TDisplacementField>
-typename PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::IndexVectorType
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::GenerateNearestValidPointsPointSet(IndexType index, unsigned int n)
-{
- typedef Functor::DistanceComparisonFunctor ComparisonFunctorType;
- DistanceVectorType distanceVector;
- IndexVectorType indexVector;
- IndexVectorType sortVector;
- unsigned int i = 0;
- unsigned int j = 0;
-
- typedef typename PointSetType::PointsContainer::ConstIterator PointSetIteratorType;
-
- PointSetIteratorType it = this->GetPointSet()->GetPoints()->Begin();
- for (; it != this->GetPointSet()->GetPoints()->End(); ++it)
- {
- PointType p;
- p[0] = it.Value()[0];
- p[1] = it.Value()[1];
- if (std::abs(this->GetPointSet()->GetPointData()->GetElement(j)[0]) >= m_MetricThreshold)
- {
-
- distanceVector.push_back(EuclideanDistanceMetric(index, p));
- sortVector.push_back(i);
- indexVector.push_back(j);
- ++i;
- }
- ++j;
- }
-
- ComparisonFunctorType comp;
- comp.SetDistanceVector(distanceVector);
- sort(sortVector.begin(), sortVector.end(), comp);
-
- // building output vector
- unsigned int nbElements = (n < indexVector.size() ? n : indexVector.size());
- IndexVectorType output;
- for (i = 0; i < nbElements; ++i)
- {
- output.push_back(indexVector[sortVector[i]]);
- }
- return output;
-}
-
-template <class TPointSet, class TDisplacementField>
-double
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::EuclideanDistanceMetric(IndexType index, PointType p)
-{
- PointType pprime;
- // our point are expressed in index and not in physical coordinates
- //this->GetOutput()->TransformIndexToPhysicalPoint(index, pprime);
- return std::sqrt(std::pow(index[0] - p[0], 2) + std::pow(index[1] - p[1], 2));
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.h b/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.h
deleted file mode 100644
index a947bb82cd939c29420ed9d917118a23558af2e6..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.h
+++ /dev/null
@@ -1,106 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPointSetWithTransformToDisplacementFieldGenerator_h
-#define otbPointSetWithTransformToDisplacementFieldGenerator_h
-
-#include "otbPointSetToDisplacementFieldGenerator.h"
-#include "itkTransform.h"
-
-namespace otb
-{
-/** \class PointSetWithTransformToDisplacementFieldGenerator
- * \brief Base class for filters generating a displacement field from a point set enriched with local transform information.
- *
- * The output of the filters deriving from this base class can be passed to the itk::WarpImageFilter for image resampling.
- *
- * \sa DisparityMapEstimationMethod
- * \sa itk::WarpImageFilter
- *
- * \ingroup DisparityMap
- *
- * \ingroup OTBDisplacementField
- */
-template <class TPointSet, class TDisplacementField>
-class ITK_EXPORT PointSetWithTransformToDisplacementFieldGenerator
- : public PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-{
-public:
- /** Standard typedefs */
- typedef PointSetWithTransformToDisplacementFieldGenerator Self;
- typedef PointSetToDisplacementFieldGenerator<TPointSet, TDisplacementField> Superclass;
- typedef itk::SmartPointer<Self> Pointer;
- typedef itk::SmartPointer<const Self> ConstPointer;
-
- /** Type macro */
- itkNewMacro(Self);
-
- /** Creation through object factory macro */
- itkTypeMacro(PointSetWithTransformToDisplacementFieldGenerator, PointSetToDisplacementFieldGenerator);
-
- /** Template parameters typedefs */
- typedef TPointSet PointSetType;
- typedef typename PointSetType::Pointer PointSetPointerType;
-
- typedef TDisplacementField DisplacementFieldType;
- typedef typename DisplacementFieldType::Pointer DisplacementFieldPointerType;
- typedef typename DisplacementFieldType::IndexType IndexType;
- typedef typename DisplacementFieldType::SizeType SizeType;
- typedef typename DisplacementFieldType::SpacingType SpacingType;
- typedef typename DisplacementFieldType::PointType PointType;
- typedef typename DisplacementFieldType::InternalPixelType ValueType;
-
- /** More typedefs */
- typedef typename Superclass::DistanceVectorType DistanceVectorType;
- typedef typename Superclass::IndexVectorType IndexVectorType;
-
- /** Transform typedefs */
- typedef itk::Transform<double, 2, 2> TransformType;
- typedef typename TransformType::Pointer TransformPointerType;
- typedef typename TransformType::ParametersType ParametersType;
-
- /** Set/Get the Transform. */
- itkSetObjectMacro(Transform, TransformType);
- itkGetObjectMacro(Transform, TransformType);
-
-protected:
- /** Constructor */
- PointSetWithTransformToDisplacementFieldGenerator();
- /** Destructor */
- ~PointSetWithTransformToDisplacementFieldGenerator() override {}
- /**PrintSelf method */
- void PrintSelf(std::ostream& os, itk::Indent indent) const override;
-
-private:
- PointSetWithTransformToDisplacementFieldGenerator(const Self &) = delete;
- void operator =(const Self&) = delete;
-
- /**
- * The transform used for local registration.
- */
- TransformPointerType m_Transform;
-
-};
-} // End namespace otb
-#ifndef OTB_MANUAL_INSTANTIATION
-#include "otbPointSetWithTransformToDisplacementFieldGenerator.hxx"
-#endif
-
-#endif
diff --git a/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.hxx b/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.hxx
deleted file mode 100644
index 8cd221644a2d657e8127facbe434b852e4df869a..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/include/otbPointSetWithTransformToDisplacementFieldGenerator.hxx
+++ /dev/null
@@ -1,50 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#ifndef otbPointSetWithTransformToDisplacementFieldGenerator_hxx
-#define otbPointSetWithTransformToDisplacementFieldGenerator_hxx
-
-#include "otbPointSetWithTransformToDisplacementFieldGenerator.h"
-
-#include "otbMacro.h"
-
-namespace otb
-{
-/**
- * Constructor
- */
-template <class TPointSet, class TDisplacementField>
-PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PointSetWithTransformToDisplacementFieldGenerator()
-{
- m_Transform = nullptr; // has to be provided by the user
-}
-/**
- * PrintSelf Method
- */
-template <class TPointSet, class TDisplacementField>
-void
-PointSetWithTransformToDisplacementFieldGenerator<TPointSet, TDisplacementField>
-::PrintSelf(std::ostream& os, itk::Indent indent) const
-{
- Superclass::PrintSelf(os, indent);
-}
-} // End namespace otb
-#endif
diff --git a/Modules/Registration/DisplacementField/otb-module.cmake b/Modules/Registration/DisplacementField/otb-module.cmake
deleted file mode 100644
index b8efc64ea38e78fa5dbe0f82615e2abb88f26e59..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/otb-module.cmake
+++ /dev/null
@@ -1,41 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-set(DOCUMENTATION "This module contains filters that generate a deformation
-field by using some interpolation criterion on the deformation values from the point
-set. Several interpolation methods are available (Nearest neighbours, linear,
-BSpline). The class otb::StereorectificationDisplacementFieldSource is specialized
-in generating a deformation field between two images in epipolar geometry
-(horizontal shifts).")
-
-otb_module(OTBDisplacementField
- DEPENDS
- OTBCommon
- OTBITK
- OTBImageBase
- OTBObjectList
-
- TEST_DEPENDS
- OTBImageIO
- OTBTestKernel
-
- DESCRIPTION
- "${DOCUMENTATION}"
-)
diff --git a/Modules/Registration/DisplacementField/test/CMakeLists.txt b/Modules/Registration/DisplacementField/test/CMakeLists.txt
deleted file mode 100644
index 440c6b130cf207b956ef74153868428e58bf8bbe..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/CMakeLists.txt
+++ /dev/null
@@ -1,88 +0,0 @@
-#
-# Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
-#
-# This file is part of Orfeo Toolbox
-#
-# https://www.orfeo-toolbox.org/
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-otb_module_test()
-
-set(OTBDisplacementFieldTests
-otbDisplacementFieldTestDriver.cxx
-otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.cxx
-otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.cxx
-otbNearestTransformDisplacementFieldGenerator.cxx
-otbNearestPointDisplacementFieldGenerator.cxx
-otbBSplinesInterpolateTransformDisplacementFieldGenerator.cxx
-otbBSplinesInterpolateDisplacementFieldGenerator.cxx
-)
-
-add_executable(otbDisplacementFieldTestDriver ${OTBDisplacementFieldTests})
-target_link_libraries(otbDisplacementFieldTestDriver ${OTBDisplacementField-Test_LIBRARIES})
-otb_module_target_label(otbDisplacementFieldTestDriver)
-
-# Tests Declaration
-
-otb_add_test(NAME dmTvNNearestTransformsLinearInterpolateDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- --compare-image ${EPSILON_10}
- ${BASELINE}/dmTvNNearestTransformsLinearInterpolateDeformationField.tif
- ${TEMP}/dmTvNNearestTransformsLinearInterpolateDisplacementField.tif
- otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator
- ${TEMP}/dmTvNNearestTransformsLinearInterpolateDisplacementField.tif
- )
-
-otb_add_test(NAME dmTvNNearestPointsLinearInterpolateDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- --compare-image ${EPSILON_10}
- ${BASELINE}/dmTvNNearestPointsLinearInterpolateDeformationField.tif
- ${TEMP}/dmTvNNearestPointsLinearInterpolateDisplacementField.tif
- otbNNearestPointsLinearInterpolateDisplacementFieldGenerator
- ${TEMP}/dmTvNNearestPointsLinearInterpolateDisplacementField.tif
- )
-
-
-
-otb_add_test(NAME dmTvNearestTransformDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- --compare-image ${EPSILON_10}
- ${BASELINE}/dmTvNearestTransformDeformationField.tif
- ${TEMP}/dmTvNearestTransformDisplacementField.tif
- otbNearestTransformDisplacementFieldGenerator
- ${TEMP}/dmTvNearestTransformDisplacementField.tif
- )
-
-otb_add_test(NAME dmTvNearestPointDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- --compare-image ${EPSILON_10}
- ${BASELINE}/dmTvNearestPointDeformationField.tif
- ${TEMP}/dmTvNearestPointDisplacementField.tif
- otbNearestPointDisplacementFieldGenerator
- ${TEMP}/dmTvNearestPointDisplacementField.tif
- )
-
-#otb_add_test(NAME dmTvBSplinesInterpolateTransformDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- #--compare-image ${EPSILON_4}
- #${BASELINE}/dmTvBSplinesInterpolateTransformDeformationFieldGenerator.tif
- #${TEMP}/dmTvBSplinesInterpolateTransformDisplacementFieldGenerator.tif
- #otbBSplinesInterpolateTransformDisplacementFieldGenerator
- #${TEMP}/dmTvBSplinesInterpolateTransformDisplacementFieldGenerator.tif
- #)
-
-otb_add_test(NAME dmTvBSplinesInterpolateDisplacementFieldGenerator COMMAND otbDisplacementFieldTestDriver
- --compare-image ${EPSILON_10}
- ${BASELINE}/dmTvBSplinesInterpolateDeformationField.tif
- ${TEMP}/dmTvBSplinesInterpolateDisplacementField.tif
- otbBSplinesInterpolateDisplacementFieldGenerator
- ${TEMP}/dmTvBSplinesInterpolateDisplacementField.tif
- )
-
diff --git a/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateDisplacementFieldGenerator.cxx
deleted file mode 100644
index 9135073f0ccdadbf018d1f7b2761f1fd91b5d66b..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,98 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbBSplinesInterpolateDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-
-int otbBSplinesInterpolateDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::BSplinesInterpolateDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(3), pd2(3), pd3(3), pd4(3), pd5(3);
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
-
- pd1[0] = 0.95;
- pd1[1] = 10;
- pd1[2] = -5;
- pd2[0] = 0.98;
- pd2[1] = 2;
- pd2[2] = 5;
- pd3[0] = 0.5;
- pd3[1] = 20;
- pd3[2] = -20;
- pd4[0] = 0.91;
- pd4[1] = 15;
- pd4[2] = -5;
- pd5[0] = 0.91;
- pd5[1] = 5;
- pd5[2] = 5;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetPointSet(ps);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateTransformDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateTransformDisplacementFieldGenerator.cxx
deleted file mode 100644
index df178d762b61e25893f176f9aa175645280ed5a3..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbBSplinesInterpolateTransformDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,122 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbBSplinesInterpolateTransformDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-#include "itkEuler2DTransform.h"
-
-int otbBSplinesInterpolateTransformDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::BSplinesInterpolateTransformDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef itk::Euler2DTransform<double> TransformType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(6), pd2(6), pd3(6), pd4(6), pd5(6);
- itk::Point<double, 2> center;
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
- center.Fill(50);
-
- pd1[0] = 0.95;
- pd1[1] = 0;
- pd1[2] = 0;
- pd1[3] = 0.03925;
- pd1[4] = 5;
- pd1[5] = 5;
- pd2[0] = 0.98;
- pd2[1] = 0;
- pd2[2] = 0;
- pd2[3] = -0.03925;
- pd2[4] = 5;
- pd2[5] = -5;
- pd3[0] = 0.5;
- pd3[1] = 0;
- pd3[2] = 0;
- pd3[3] = 0;
- pd3[4] = 0;
- pd3[5] = 0;
- pd4[0] = 0.91;
- pd4[1] = 0;
- pd4[2] = 0;
- pd4[3] = 0.03925;
- pd4[4] = -5;
- pd4[5] = 5;
- pd5[0] = 0.91;
- pd5[1] = 0;
- pd5[2] = 0;
- pd5[3] = -0.03925;
- pd5[4] = -5;
- pd5[5] = -5;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- TransformType::Pointer transform = TransformType::New();
- transform->SetCenter(center);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetPointSet(ps);
- filter->SetTransform(transform);
- filter->AddAngularParameter(0);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/test/otbDisplacementFieldTestDriver.cxx b/Modules/Registration/DisplacementField/test/otbDisplacementFieldTestDriver.cxx
deleted file mode 100644
index 86d6641fce1b1b594048f20c2648a2e95eabdb88..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbDisplacementFieldTestDriver.cxx
+++ /dev/null
@@ -1,31 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "otbTestMain.h"
-
-void RegisterTests()
-{
- REGISTER_TEST(otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator);
- REGISTER_TEST(otbNNearestPointsLinearInterpolateDisplacementFieldGenerator);
- REGISTER_TEST(otbNearestTransformDisplacementFieldGenerator);
- REGISTER_TEST(otbNearestPointDisplacementFieldGenerator);
- REGISTER_TEST(otbBSplinesInterpolateTransformDisplacementFieldGenerator);
- REGISTER_TEST(otbBSplinesInterpolateDisplacementFieldGenerator);
-}
diff --git a/Modules/Registration/DisplacementField/test/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.cxx
deleted file mode 100644
index b487435899319e9d6562802fe539a35a6240d0b4..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,99 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbNNearestPointsLinearInterpolateDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-
-int otbNNearestPointsLinearInterpolateDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::NNearestPointsLinearInterpolateDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(3), pd2(3), pd3(3), pd4(3), pd5(3);
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
-
- pd1[0] = 0.95;
- pd1[1] = 10;
- pd1[2] = -5;
- pd2[0] = 0.98;
- pd2[1] = 2;
- pd2[2] = 5;
- pd3[0] = 0.5;
- pd3[1] = 20;
- pd3[2] = -20;
- pd4[0] = 0.91;
- pd4[1] = 15;
- pd4[2] = -5;
- pd5[0] = 0.91;
- pd5[1] = 5;
- pd5[2] = 5;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetNumberOfPoints(5);
- filter->SetPointSet(ps);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/test/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.cxx
deleted file mode 100644
index fb3b638d83fb61f46aef76faa7204e906c5404f0..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,122 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-#include "itkEuler2DTransform.h"
-
-int otbNNearestTransformsLinearInterpolateDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::NNearestTransformsLinearInterpolateDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef itk::Euler2DTransform<double> TransformType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(6), pd2(6), pd3(6), pd4(6), pd5(6);
- itk::Point<double, 2> center;
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
- center.Fill(50);
-
- pd1[0] = 0.95;
- pd1[1] = 0;
- pd1[2] = 0;
- pd1[3] = 5;
- pd1[4] = 5;
- pd1[5] = 0.001769;
- pd2[0] = 0.98;
- pd2[1] = 0;
- pd2[2] = 0;
- pd2[3] = -5;
- pd2[4] = 5;
- pd2[5] = -0.001769;
- pd3[0] = 0.5;
- pd3[1] = 0;
- pd3[2] = 0;
- pd3[3] = 0;
- pd3[4] = 0;
- pd3[5] = 0;
- pd4[0] = 0.91;
- pd4[1] = 0;
- pd4[2] = 0;
- pd4[3] = 5;
- pd4[4] = -5;
- pd4[5] = 0.001769;
- pd5[0] = 0.91;
- pd5[1] = 0;
- pd5[2] = 0;
- pd5[3] = -5;
- pd5[4] = -5;
- pd5[5] = -0.001769;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- TransformType::Pointer transform = TransformType::New();
- transform->SetCenter(center);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetNumberOfPoints(5);
- filter->SetPointSet(ps);
- filter->SetTransform(transform);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/test/otbNearestPointDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbNearestPointDisplacementFieldGenerator.cxx
deleted file mode 100644
index b6de1e79ab945896a66ffd7b1ccf2685351a0d6e..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbNearestPointDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,98 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbNearestPointDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-
-int otbNearestPointDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::NearestPointDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(3), pd2(3), pd3(3), pd4(3), pd5(3);
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
-
- pd1[0] = 0.95;
- pd1[1] = 10;
- pd1[2] = -5;
- pd2[0] = 0.98;
- pd2[1] = 2;
- pd2[2] = 5;
- pd3[0] = 0.5;
- pd3[1] = 20;
- pd3[2] = -20;
- pd4[0] = 0.91;
- pd4[1] = 15;
- pd4[2] = -5;
- pd5[0] = 0.91;
- pd5[1] = 5;
- pd5[2] = 5;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetPointSet(ps);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/DisplacementField/test/otbNearestTransformDisplacementFieldGenerator.cxx b/Modules/Registration/DisplacementField/test/otbNearestTransformDisplacementFieldGenerator.cxx
deleted file mode 100644
index abf2463501a6ac807d68850cdf9b8c0e6748a21f..0000000000000000000000000000000000000000
--- a/Modules/Registration/DisplacementField/test/otbNearestTransformDisplacementFieldGenerator.cxx
+++ /dev/null
@@ -1,121 +0,0 @@
-/*
- * Copyright (C) 2005-2019 Centre National d'Etudes Spatiales (CNES)
- *
- * This file is part of Orfeo Toolbox
- *
- * https://www.orfeo-toolbox.org/
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-
-#include "itkMacro.h"
-#include "itkPointSet.h"
-#include "otbVectorImage.h"
-#include "otbNearestTransformDisplacementFieldGenerator.h"
-#include "otbImageFileWriter.h"
-#include "itkEuler2DTransform.h"
-
-int otbNearestTransformDisplacementFieldGenerator(int itkNotUsed(argc), char * argv[])
-{
- const unsigned int Dimension = 2;
- const char * outfname = argv[1];
- typedef double PixelType;
- typedef otb::VectorImage<PixelType, Dimension> ImageType;
- typedef itk::Array<double> ParamType;
- typedef itk::PointSet<ParamType, Dimension> PointSetType;
- typedef PointSetType::PointType PointType;
- typedef otb::NearestTransformDisplacementFieldGenerator<PointSetType, ImageType> FilterType;
- typedef otb::ImageFileWriter<ImageType> WriterType;
- typedef itk::Euler2DTransform<double> TransformType;
-
- ImageType::SizeType size;
- size.Fill(100);
- double thresh = 0.9;
-
- // Preparing point set
- PointSetType::Pointer ps = PointSetType::New();
- PointType p1, p2, p3, p4, p5;
- ParamType pd1(6), pd2(6), pd3(6), pd4(6), pd5(6);
- itk::Point<double, 2> center;
-
- p1[0] = 10;
- p1[1] = 10;
- p2[0] = 75;
- p2[1] = 10;
- p3[0] = 50;
- p3[1] = 50;
- p4[0] = 10;
- p4[1] = 60;
- p5[0] = 85;
- p5[1] = 70;
- center.Fill(50);
-
- pd1[0] = 0.95;
- pd1[1] = 0;
- pd1[2] = 0;
- pd1[3] = 5;
- pd1[4] = 5;
- pd1[5] = 0.001769;
- pd2[0] = 0.98;
- pd2[1] = 0;
- pd2[2] = 0;
- pd2[3] = -5;
- pd2[4] = 5;
- pd2[5] = -0.001769;
- pd3[0] = 0.5;
- pd3[1] = 0;
- pd3[2] = 0;
- pd3[3] = 0;
- pd3[4] = 0;
- pd3[5] = 0;
- pd4[0] = 0.91;
- pd4[1] = 0;
- pd4[2] = 0;
- pd4[3] = 5;
- pd4[4] = -5;
- pd4[5] = 0.001769;
- pd5[0] = 0.91;
- pd5[1] = 0;
- pd5[2] = 0;
- pd5[3] = -5;
- pd5[4] = -5;
- pd5[5] = -0.001769;
-
- ps->SetPoint(0, p1);
- ps->SetPointData(0, pd1);
- ps->SetPoint(1, p2);
- ps->SetPointData(1, pd2);
- ps->SetPoint(2, p3);
- ps->SetPointData(2, pd3);
- ps->SetPoint(3, p4);
- ps->SetPointData(3, pd4);
- ps->SetPoint(4, p5);
- ps->SetPointData(4, pd5);
-
- TransformType::Pointer transform = TransformType::New();
- transform->SetCenter(center);
-
- // Instantiating object
- FilterType::Pointer filter = FilterType::New();
- filter->SetOutputSize(size);
- filter->SetMetricThreshold(thresh);
- filter->SetPointSet(ps);
- filter->SetTransform(transform);
-
- WriterType::Pointer writer = WriterType::New();
- writer->SetInput(filter->GetOutput());
- writer->SetFileName(outfname);
- writer->Update();
-
- return EXIT_SUCCESS;
-}
diff --git a/Modules/Registration/Stereo/test/otbMulti3DMapToDEMFilter.cxx b/Modules/Registration/Stereo/test/otbMulti3DMapToDEMFilter.cxx
index 7e8df6ab358066e14723bad5b162ad9778b56751..2263ed97cee6e57e9401b288077f538329408093 100644
--- a/Modules/Registration/Stereo/test/otbMulti3DMapToDEMFilter.cxx
+++ b/Modules/Registration/Stereo/test/otbMulti3DMapToDEMFilter.cxx
@@ -98,12 +98,10 @@ int otbMulti3DMapToDEMFilterEPSG(int argc, char* argv[])
for(unsigned int i=0; i<mapSize; i++)
{
multiFilter->Set3DMapInput(i,mapReaderList->GetNthElement(i)->GetOutput());
- // multiFilter->SetMapKeywordList(i,mapReaderList->GetNthElement(i)->GetOutput()->GetImageKeywordlist());
multiFilter->SetMaskInput(i,maskReaderList->GetNthElement(i)->GetOutput());
}
//set output parameters
- // multiFilter->SetOutputParametersFrom3DMap();
VectorImageType::IndexType start;
start[0] = atoi(argv[argc-9]);
start[1] = atoi(argv[argc-8]);
@@ -132,7 +130,6 @@ int otbMulti3DMapToDEMFilterEPSG(int argc, char* argv[])
WriterType::Pointer writer = WriterType::New();
multiFilter->SetNumberOfThreads(atoi(argv[argc-11]));
- //multiFilter->Update();
writer->SetInput(multiFilter->GetOutput());
@@ -141,153 +138,6 @@ int otbMulti3DMapToDEMFilterEPSG(int argc, char* argv[])
writer->Update();
return EXIT_SUCCESS;
-
- /*
- if (argc != 12)
- {
- std::cout << argv[0] <<
- " <input filename> <output filename> <origin easting> <origin northing> <x size> <y size> <x spacing> <y spacing> <UTM zone> <UTM hemisphere>"
- << std::endl;
-
- return EXIT_FAILURE;
- }
-
- typedef otb::VectorImage<double, 2> VectorImageType;
- typedef otb::ImageFileReader<VectorImageType> ReaderType;
- typedef otb::ImageFileWriter<VectorImageType> WriterType;
- typedef otb::UtmInverseProjection UtmMapProjectionType;
- typedef otb::OrthoRectificationFilter<VectorImageType, VectorImageType, UtmMapProjectionType> OrthoRectifFilterType;
-
- //Allocate pointer
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
-
- OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
- UtmMapProjectionType::Pointer utmMapProjection = UtmMapProjectionType::New();
-
- // Set parameters ...
- reader->SetFileName(argv[1]);
- writer->SetFileName(argv[2]);
-
- reader->GenerateOutputInformation();
- std::cout << reader->GetOutput() << std::endl;
-
- orthoRectifFilter->SetInput(reader->GetOutput());
-
- VectorImageType::IndexType start;
- start[0] = 0;
- start[1] = 0;
- orthoRectifFilter->SetOutputStartIndex(start);
-
- VectorImageType::SizeType size;
- size[0] = atoi(argv[5]); // X size
- size[1] = atoi(argv[6]); //Y size
- orthoRectifFilter->SetOutputSize(size);
-
- VectorImageType::SpacingType spacing;
- spacing[0] = atof(argv[7]);
- spacing[1] = atof(argv[8]);
- orthoRectifFilter->SetOutputSpacing(spacing);
-
- VectorImageType::PointType origin;
- origin[0] = strtod(argv[3], NULL); //Origin easting
- origin[1] = strtod(argv[4], NULL); //Origin northing
- orthoRectifFilter->SetOutputOrigin(origin);
-
- utmMapProjection->SetZone(atoi(argv[9]));
- utmMapProjection->SetHemisphere(argv[10][0]);
- orthoRectifFilter->SetMapProjection(utmMapProjection);
-
- // Deformation Field spacing
- VectorImageType::SpacingType gridSpacing;
- gridSpacing[0] = atof(argv[11]);
- gridSpacing[1] = -atof(argv[11]);
- orthoRectifFilter->SetDeformationFieldSpacing(gridSpacing);
-
- VectorImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
- no_data.Fill(0);
- orthoRectifFilter->SetEdgePaddingValue(no_data);
-
- writer->SetInput(orthoRectifFilter->GetOutput());
- writer->SetNumberOfDivisionsTiledStreaming(4);
- writer->Update();
-
- return EXIT_SUCCESS; */
-
-
-
-
- /*
- if (argc != 12)
- {
- std::cout << argv[0] <<
- " <input filename> <output filename> <origin easting> <origin northing> <x size> <y size> <x spacing> <y spacing> <UTM zone> <UTM hemisphere>"
- << std::endl;
-
- return EXIT_FAILURE;
- }
-
- typedef otb::VectorImage<double, 2> VectorImageType;
- typedef otb::ImageFileReader<VectorImageType> ReaderType;
- typedef otb::ImageFileWriter<VectorImageType> WriterType;
- typedef otb::UtmInverseProjection UtmMapProjectionType;
- typedef otb::OrthoRectificationFilter<VectorImageType, VectorImageType, UtmMapProjectionType> OrthoRectifFilterType;
-
- //Allocate pointer
- ReaderType::Pointer reader = ReaderType::New();
- WriterType::Pointer writer = WriterType::New();
-
- OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
- UtmMapProjectionType::Pointer utmMapProjection = UtmMapProjectionType::New();
-
- // Set parameters ...
- reader->SetFileName(argv[1]);
- writer->SetFileName(argv[2]);
-
- reader->GenerateOutputInformation();
- std::cout << reader->GetOutput() << std::endl;
-
- orthoRectifFilter->SetInput(reader->GetOutput());
-
- VectorImageType::IndexType start;
- start[0] = 0;
- start[1] = 0;
- orthoRectifFilter->SetOutputStartIndex(start);
-
- VectorImageType::SizeType size;
- size[0] = atoi(argv[5]); // X size
- size[1] = atoi(argv[6]); //Y size
- orthoRectifFilter->SetOutputSize(size);
-
- VectorImageType::SpacingType spacing;
- spacing[0] = atof(argv[7]);
- spacing[1] = atof(argv[8]);
- orthoRectifFilter->SetOutputSpacing(spacing);
-
- VectorImageType::PointType origin;
- origin[0] = strtod(argv[3], NULL); //Origin easting
- origin[1] = strtod(argv[4], NULL); //Origin northing
- orthoRectifFilter->SetOutputOrigin(origin);
-
- utmMapProjection->SetZone(atoi(argv[9]));
- utmMapProjection->SetHemisphere(argv[10][0]);
- orthoRectifFilter->SetMapProjection(utmMapProjection);
-
- // Deformation Field spacing
- VectorImageType::SpacingType gridSpacing;
- gridSpacing[0] = atof(argv[11]);
- gridSpacing[1] = -atof(argv[11]);
- orthoRectifFilter->SetDeformationFieldSpacing(gridSpacing);
-
- VectorImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
- no_data.Fill(0);
- orthoRectifFilter->SetEdgePaddingValue(no_data);
-
- writer->SetInput(orthoRectifFilter->GetOutput());
- writer->SetNumberOfDivisionsTiledStreaming(4);
- writer->Update();
-
- return EXIT_SUCCESS; */
}
int otbMulti3DMapToDEMFilterManual(int argc, char* argv[])
@@ -354,12 +204,10 @@ multiFilter->SetCellFusionMode(fusionMode);
for(unsigned int i=0; i<mapSize; i++)
{
multiFilter->Set3DMapInput(i,mapReaderList->GetNthElement(i)->GetOutput());
- // multiFilter->SetMapKeywordList(i,mapReaderList->GetNthElement(i)->GetOutput()->GetImageKeywordlist());
multiFilter->SetMaskInput(i,maskReaderList->GetNthElement(i)->GetOutput());
}
//set output parameters
-//multiFilter->SetOutputParametersFrom3DMap();
VectorImageType::IndexType start;
start[0] = atoi(argv[argc-7]);
start[1] = atoi(argv[argc-8]);
@@ -385,7 +233,6 @@ multiFilter->SetOutputOrigin(origin);
WriterType::Pointer writer = WriterType::New();
multiFilter->SetNumberOfThreads(atoi(argv[argc-10]));
-//multiFilter->Update();
writer->SetInput(multiFilter->GetOutput());
@@ -395,79 +242,6 @@ writer->Update();
return EXIT_SUCCESS;
-
-/*
-if (argc != 12)
- {
- std::cout << argv[0] <<
- " <input filename> <output filename> <origin easting> <origin northing> <x size> <y size> <x spacing> <y spacing> <UTM zone> <UTM hemisphere>"
- << std::endl;
-
- return EXIT_FAILURE;
- }
-
-typedef otb::VectorImage<double, 2> VectorImageType;
-typedef otb::ImageFileReader<VectorImageType> ReaderType;
-typedef otb::ImageFileWriter<VectorImageType> WriterType;
-typedef otb::UtmInverseProjection UtmMapProjectionType;
-typedef otb::OrthoRectificationFilter<VectorImageType, VectorImageType, UtmMapProjectionType> OrthoRectifFilterType;
-
-//Allocate pointer
-ReaderType::Pointer reader = ReaderType::New();
-WriterType::Pointer writer = WriterType::New();
-
-OrthoRectifFilterType::Pointer orthoRectifFilter = OrthoRectifFilterType::New();
-UtmMapProjectionType::Pointer utmMapProjection = UtmMapProjectionType::New();
-
-// Set parameters ...
-reader->SetFileName(argv[1]);
-writer->SetFileName(argv[2]);
-
-reader->GenerateOutputInformation();
-std::cout << reader->GetOutput() << std::endl;
-
-orthoRectifFilter->SetInput(reader->GetOutput());
-
-VectorImageType::IndexType start;
-start[0] = 0;
-start[1] = 0;
-orthoRectifFilter->SetOutputStartIndex(start);
-
-VectorImageType::SizeType size;
-size[0] = atoi(argv[5]); // X size
-size[1] = atoi(argv[6]); //Y size
-orthoRectifFilter->SetOutputSize(size);
-
-VectorImageType::SpacingType spacing;
-spacing[0] = atof(argv[7]);
-spacing[1] = atof(argv[8]);
-orthoRectifFilter->SetOutputSpacing(spacing);
-
-VectorImageType::PointType origin;
-origin[0] = strtod(argv[3], NULL); //Origin easting
-origin[1] = strtod(argv[4], NULL); //Origin northing
-orthoRectifFilter->SetOutputOrigin(origin);
-
-utmMapProjection->SetZone(atoi(argv[9]));
-utmMapProjection->SetHemisphere(argv[10][0]);
-orthoRectifFilter->SetMapProjection(utmMapProjection);
-
-// Deformation Field spacing
-VectorImageType::SpacingType gridSpacing;
-gridSpacing[0] = atof(argv[11]);
-gridSpacing[1] = -atof(argv[11]);
-orthoRectifFilter->SetDeformationFieldSpacing(gridSpacing);
-
-VectorImageType::PixelType no_data(reader->GetOutput()->GetNumberOfComponentsPerPixel());
-no_data.Fill(0);
-orthoRectifFilter->SetEdgePaddingValue(no_data);
-
-writer->SetInput(orthoRectifFilter->GetOutput());
-writer->SetNumberOfDivisionsTiledStreaming(4);
-writer->Update();
-
-return EXIT_SUCCESS; */
-
}
@@ -529,7 +303,7 @@ int otbMulti3DMapToDEMFilter(int argc, char* argv[])
for(unsigned int i=0; i<mapSize; i++)
{
multiFilter->Set3DMapInput(i,mapReaderList->GetNthElement(i)->GetOutput());
- // multiFilter->SetMapKeywordList(i,mapReaderList->GetNthElement(i)->GetOutput()->GetImageKeywordlist());
+
multiFilter->SetMaskInput(i,maskReaderList->GetNthElement(i)->GetOutput());
}
multiFilter->SetOutputParametersFrom3DMap();
@@ -537,7 +311,6 @@ int otbMulti3DMapToDEMFilter(int argc, char* argv[])
WriterType::Pointer writer = WriterType::New();
multiFilter->SetNumberOfThreads(atoi(argv[argc-2]));
- //multiFilter->Update();
writer->SetInput(multiFilter->GetOutput());
diff --git a/Modules/Segmentation/Conversion/test/CMakeLists.txt b/Modules/Segmentation/Conversion/test/CMakeLists.txt
index 363687e5c3cd789d24cdeaa9b26b594e2f56513d..b704bd6275d83837200861e7448c820f89dda0ac 100644
--- a/Modules/Segmentation/Conversion/test/CMakeLists.txt
+++ b/Modules/Segmentation/Conversion/test/CMakeLists.txt
@@ -195,19 +195,11 @@ otb_add_test(NAME bfTvVectorDataRasterizeFilterSHP COMMAND otbConversionTestDriv
#4 25 0.1 100
#)
-otb_add_test(NAME obTvLabelMapToVectorDataFilter2 COMMAND otbConversionTestDriver
- --compare-ogr ${NOTOL}
- ${BASELINE_FILES}/obTvLabelMapToVectorDataFilter.shp
- ${TEMP}/obTvLabelMapToVectorDataFilter2.shp
- otbLabelMapToVectorDataFilter
- ${INPUTDATA}/rcc8_mire5.png
- ${TEMP}/obTvLabelMapToVectorDataFilter2.shp)
-
otb_add_test(NAME obTvLabelMapToVectorDataFilter COMMAND otbConversionTestDriver
--compare-ogr ${NOTOL}
${BASELINE_FILES}/obTvLabelMapToVectorDataFilter.shp
${TEMP}/obTvLabelMapToVectorDataFilter.shp
otbLabelMapToVectorDataFilter
- ${INPUTDATA}/rcc8_mire1.png
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
${TEMP}/obTvLabelMapToVectorDataFilter.shp)
diff --git a/Modules/Segmentation/Metrics/test/CMakeLists.txt b/Modules/Segmentation/Metrics/test/CMakeLists.txt
index 1b286013d0ad582630ea14378ed22f38afca90aa..63f104f6ca630af3b11dd5fb2bc1333a70caad3c 100644
--- a/Modules/Segmentation/Metrics/test/CMakeLists.txt
+++ b/Modules/Segmentation/Metrics/test/CMakeLists.txt
@@ -47,8 +47,8 @@ otb_add_test(NAME obTvHooverMatrixFilter COMMAND otbMetricsTestDriver
${BASELINE_FILES}/obTvHooverMatrixFilter.txt
${TEMP}/obTvHooverMatrixFilter.txt
otbHooverMatrixFilter
- ${INPUTDATA}/Seg1InputForRCC8Graph.tif
- ${INPUTDATA}/Seg2InputForRCC8Graph.tif
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
+ ${INPUTDATA}/labelImage_UnsignedChar.tif
${TEMP}/obTvHooverMatrixFilter.txt
)
diff --git a/Modules/Segmentation/MorphologicalProfiles/include/otbClosingOpeningMorphologicalFilter.h b/Modules/Segmentation/MorphologicalProfiles/include/otbClosingOpeningMorphologicalFilter.h
index 458213a22aa04a63a47064c59030aedf6441e07c..570c6cd0ea1e29a0c77b90fa3019ae9245204711 100644
--- a/Modules/Segmentation/MorphologicalProfiles/include/otbClosingOpeningMorphologicalFilter.h
+++ b/Modules/Segmentation/MorphologicalProfiles/include/otbClosingOpeningMorphologicalFilter.h
@@ -39,8 +39,7 @@ namespace otb
* of composition of the two basic morphological operation, the filtered details are dark
* on a brighter background.
*
- * \sa ClosingOpeningMorphologicalFilter,
- * MorphologicalPyramidAnalysisFilter
+ * \sa ClosingOpeningMorphologicalFilter
*
* \ingroup OTBMorphologicalProfiles
*/
diff --git a/Modules/Segmentation/MorphologicalProfiles/include/otbOpeningClosingMorphologicalFilter.h b/Modules/Segmentation/MorphologicalProfiles/include/otbOpeningClosingMorphologicalFilter.h
index df47e1bd469765126ecabfb15e4a2a15163bf1a0..3a329241c20a8bfa13ad8771b3edb46c6d9b4d73 100644
--- a/Modules/Segmentation/MorphologicalProfiles/include/otbOpeningClosingMorphologicalFilter.h
+++ b/Modules/Segmentation/MorphologicalProfiles/include/otbOpeningClosingMorphologicalFilter.h
@@ -39,8 +39,7 @@ namespace otb
* of composition of the two basic morphological operation, the filtered details are dark
* on a brighter background.
*
- * \sa ClosingOpeningMorphologicalFilter,
- * MorphologicalPyramidAnalyseFilter
+ * \sa ClosingOpeningMorphologicalFilter
*
* \ingroup OTBMorphologicalProfiles
*/