diff --git a/makeSequenceTable.R b/makeSequenceTable.R
index 364397cdfe2cde364d826e45b0239d6eef9e5a77..cdbfbde918b9165018d579645359dd5cb83e1872 100644
--- a/makeSequenceTable.R
+++ b/makeSequenceTable.R
@@ -9,7 +9,7 @@ seqtab.nochim <- removeBimeraDenovo(seqtab, method="consensus", multithread = sn
 
 saveRDS(seqtab.nochim, snakemake@output$rds)
 
-uniquesToFasta(seqtab.nochim, snakemake@output$fasta)
+uniquesToFasta(seqtab.nochim, snakemake@output$fasta, ids = getSequences(seqtab.nochim))
 
 write.table(t(seqtab.nochim), snakemake@output$tsv, sep = "\t", quote = FALSE)