Commit 66025e82 authored by Midoux Cedric's avatar Midoux Cedric
Browse files

samtools view

parent 816196d1
......@@ -39,7 +39,11 @@ rule mapping:
"-1 {input.R1} "
"-2 {input.R2} "
"-S - "
"| "
"|"
"samtools view "
"-h "
"-b "
"|"
"samtools sort "
"--threads {threads} "
"--output-fmt BAM "
......
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