Commit 8f3f7feb authored by Midoux Cedric's avatar Midoux Cedric
Browse files

Update global.smk

parent 47503c73
......@@ -8,8 +8,10 @@ rule all:
input:
"report/multiqc_report.html",
expand("report/reads_{sample}-krona.html", sample=config["SAMPLES"]),
"report/contigs_coassembly-taxNames.tsv",
"report/quast_coassembly/report.html",
expand("report/contigs_{sample}-krona.html", sample=SAMPLES),
"report/contigs_coassembly-taxNames.tsv",
"report/genes_coassembly-taxNames.tsv",
"report/diamond_nr_coassembly.tsv",
"work/prokka/coassembly_prokka.tsv",
"work/interproscan/coassembly.faa.tsv",
......
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