From cada659b29f286794667505487f7db494b55cdfc Mon Sep 17 00:00:00 2001 From: Cedric Midoux <cedric.midoux@inra.fr> Date: Tue, 5 Nov 2019 17:35:06 +0100 Subject: [PATCH] prodigal no asterisk --- annotation.smk | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/annotation.smk b/annotation.smk index d781d61..44290d9 100644 --- a/annotation.smk +++ b/annotation.smk @@ -36,8 +36,8 @@ rule prodigal: "-o {output.gff} " "-g 11 " "-p meta " - # " ; " - # "sed --in-place 's/*/N/' {output.faa} " + " ; " + "sed --in-place 's/*$//' {output.faa} " def faa_input(wildcards): if wildcards.sample == "catalogue": -- GitLab