From cada659b29f286794667505487f7db494b55cdfc Mon Sep 17 00:00:00 2001
From: Cedric Midoux <cedric.midoux@inra.fr>
Date: Tue, 5 Nov 2019 17:35:06 +0100
Subject: [PATCH] prodigal no asterisk

---
 annotation.smk | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/annotation.smk b/annotation.smk
index d781d61..44290d9 100644
--- a/annotation.smk
+++ b/annotation.smk
@@ -36,8 +36,8 @@ rule prodigal:
 		"-o {output.gff} "
 		"-g 11 "
 		"-p meta "
-		# " ; "
-		# "sed --in-place 's/*/N/' {output.faa} "
+		" ; "
+		"sed --in-place 's/*$//' {output.faa} "
 
 def faa_input(wildcards):
 	if wildcards.sample == "catalogue":
-- 
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