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# Phenological Stages
This repository is dedicated to the construction of semantic resources (RDF dataset and OWL ontologies) that represent plant phenological development stages for agricultural practices. This work is part of the ANR D2KAB project.
BBCH-based Plant Phenological Description Ontology (ppdo) is an ontology that extends skos model to store bbch phenological scales and other scales.
More information about this ontology and associated datasets are available on http://ontology.irstea.fr/pmwiki.php/Site/Ppdo
ppdo metadata are published on the web at the uri http://ontology.inrae.fr/ppdo
A sparql end point to query ppdo and related datasets are available at http://ontology.inrae.fr/ppdo/sparql
The licence of ppdo is http://creativecommons.org/licenses/by/4.0/
ppdo.owl is the version of ppdo in OWL/XML format to use with Protégé.
ppdo.rdf is the version of the ontology in RDF/XML format to use with skos play.
The ontology engineering process used the Linked Open Terminology (LOT) methodology.
The engineering process was made using Protégé Cellfie plugin.
# Cellfie
ppdo_vide.owl is the entry file used during cellfie transformation rules in order to produce ppdo.owl.
All the files used during the generation of ppdo.owl are stored in Cellfie directory.
The algorithm is detailled in the wiki PhenologicalStages
bbch_principalStages.xlsx contains the information about principal stages of BBCH general scale.
rulesClassGeneration_bbch_principalStages.json is the cellfie rules to generate ppdo Classes.
It takes as input bbch_principalStages.xlsx files.
rulesInstanceGeneration_bbch_principalStages.json is the cellfie rules to generate individuals that represent the principal stages of BBCH general scale.
It takes as input bbch_principalStages.xlsx files.
bbch_secondaryStages.xlsx contains the information about secondary stages of BBCH general scale.
## Phenological Scale of Grapevine
rulesClassGeneration_bbch_secondaryStages.json is the cellfie rules to generate ppdo Classes.
It takes as input bbch_secondaryStages.xlsx files.
The repository grapevine contains the file that describe the phenological scale of grapevine based on ppdo ontology.
rulesInstanceGeneration_bbch_secondaryStages.json is the cellfie rules to generate individuals that represent the secondary stages of BBCH general scale.
It takes as input bbch_secondaryStages.xlsx files.
This dataset contains the 4 aligned scales of grapevine phenological stages. This work was made under the supervision of Xavier Delpuech from French Institute of Grapevine and Vine (IFV)
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