From 05ad45716230199d40f7b2db72588c5fc591a493 Mon Sep 17 00:00:00 2001
From: Delaigue Olivier <olivier.delaigue@irstea.priv>
Date: Mon, 1 Apr 2019 09:08:29 +0200
Subject: [PATCH] v1.2.12.14 DOC: references, authors and links reformated in
 many docs

---
 DESCRIPTION                         |  2 +-
 NEWS.rmd                            |  2 +-
 man/BasinObs.Rd                     | 14 +++++------
 man/Calibration.Rd                  |  6 ++---
 man/Calibration_Michel.Rd           |  9 ++++----
 man/CreateInputsCrit.Rd             | 13 ++++++-----
 man/DataAltiExtrapolation_Valery.Rd | 17 +++++++++-----
 man/ErrorCrit.Rd                    |  3 ++-
 man/ErrorCrit_KGE.Rd                |  6 ++---
 man/ErrorCrit_KGE2.Rd               | 13 ++++++-----
 man/ErrorCrit_NSE.Rd                |  6 ++---
 man/PEdaily_Oudin.Rd                |  8 +++----
 man/Param_Sets_GR4J.Rd              |  6 ++---
 man/RunModel.Rd                     |  5 ++--
 man/RunModel_CemaNeige.Rd           |  3 ++-
 man/RunModel_CemaNeigeGR4J.Rd       | 33 +++++++++++++++-----------
 man/RunModel_CemaNeigeGR5J.Rd       | 36 +++++++++++++++++------------
 man/RunModel_CemaNeigeGR6J.Rd       | 34 ++++++++++++++++-----------
 man/RunModel_GR1A.Rd                |  6 ++---
 man/RunModel_GR2M.Rd                | 13 ++++++-----
 man/RunModel_GR4H.Rd                | 14 +++++++----
 man/RunModel_GR4J.Rd                |  8 +++----
 man/RunModel_GR5J.Rd                | 13 +++++++----
 man/RunModel_GR6J.Rd                |  8 +++----
 24 files changed, 158 insertions(+), 120 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 6c524bdf..5a652377 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: airGR
 Type: Package
 Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling
-Version: 1.2.12.13
+Version: 1.2.12.14
 Date: 2019-04-01
 Authors@R: c(
   person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")),
diff --git a/NEWS.rmd b/NEWS.rmd
index 2d73e71d..1deb2e4f 100644
--- a/NEWS.rmd
+++ b/NEWS.rmd
@@ -13,7 +13,7 @@ output:
 
 
 
-### 1.2.12.13 Release Notes (2019-04-01) 
+### 1.2.12.14 Release Notes (2019-04-01) 
 
 
 
diff --git a/man/BasinObs.Rd b/man/BasinObs.Rd
index aec38b96..1c44a6a7 100644
--- a/man/BasinObs.Rd
+++ b/man/BasinObs.Rd
@@ -38,13 +38,13 @@ Times series for L0123003 are at the hourly time step for use with hourly models
 
 
 \references{
-Riboust P., Thirel G., Moine N.L. and Ribstein P. (2019),
-      Revisiting a Simple Degree-Day Model for Integrating Satellite Data: Implementation of Swe-Sca Hystereses.
-      Journal of Hydrology and Hydromechanics 67, 70–81. https://doi.org/10.2478/johh-2018-0004.
-\cr      
-Vidal J., Martin E., Franchistéguy L., Baillon M. and Soubeyroux J. (2010),
-      A 50-year high-resolution atmospheric reanalysis over France with the Safran system.
-      International Journal of Climatology 30, 1627–1644. https://doi.org/10.1002/joc.2003.
+Riboust P., Thirel G., Moine N.L. and Ribstein P. (2019). 
+  Revisiting a Simple Degree-Day Model for Integrating Satellite Data: Implementation of Swe-Sca Hystereses. 
+  Journal of Hydrology and Hydromechanics 67, 70–81. https://doi.org/10.2478/johh-2018-0004.
+\cr\cr
+Vidal J., Martin E., Franchistéguy L., Baillon M. and Soubeyroux J. (2010). 
+  A 50-year high-resolution atmospheric reanalysis over France with the Safran system. 
+  International Journal of Climatology 30, 1627–1644. https://doi.org/10.1002/joc.2003.
 }
 
 \seealso{
diff --git a/man/Calibration.Rd b/man/Calibration.Rd
index d7f58e78..1bd3b991 100644
--- a/man/Calibration.Rd
+++ b/man/Calibration.Rd
@@ -103,8 +103,8 @@ Laurent Coron, Olivier Delaigue
 
 \seealso{
 \code{\link{Calibration_Michel}},
-         \code{\link{ErrorCrit}}, \code{\link{TransfoParam}},
-         \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, 
-         \code{\link{CreateInputsCrit}}, \code{\link{CreateCalibOptions}}.
+\code{\link{ErrorCrit}}, \code{\link{TransfoParam}},
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, 
+\code{\link{CreateInputsCrit}}, \code{\link{CreateCalibOptions}}.
 }
 
diff --git a/man/Calibration_Michel.Rd b/man/Calibration_Michel.Rd
index 0242e521..0adba0f5 100644
--- a/man/Calibration_Michel.Rd
+++ b/man/Calibration_Michel.Rd
@@ -133,14 +133,15 @@ Laurent Coron, Claude Michel, Olivier Delaigue, Guillaume Thirel
 
 \references{
 Michel, C. (1991),
-       Hydrologie appliquée aux petits bassins ruraux, Hydrology handbook (in French), Cemagref, Antony, France.
+       Hydrologie appliquée aux petits bassins ruraux,
+       Hydrology handbook (in French), Cemagref, Antony, France.
 }
 
 
 \seealso{
 \code{\link{Calibration}},
-         \code{\link{RunModel_GR4J}}, \code{\link{TransfoParam}}, \code{\link{ErrorCrit_RMSE}},
-         \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, 
-         \code{\link{CreateInputsCrit}}, \code{\link{CreateCalibOptions}}.
+\code{\link{RunModel_GR4J}}, \code{\link{TransfoParam}}, \code{\link{ErrorCrit_RMSE}},
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, 
+\code{\link{CreateInputsCrit}}, \code{\link{CreateCalibOptions}}.
 }
 
diff --git a/man/CreateInputsCrit.Rd b/man/CreateInputsCrit.Rd
index f505f926..b931f83f 100644
--- a/man/CreateInputsCrit.Rd
+++ b/man/CreateInputsCrit.Rd
@@ -140,12 +140,13 @@ Olivier Delaigue, Laurent Coron, Guillaume Thirel
 
 
 \references{
-Pushpalatha, R., Perrin, C., Le Moine, N. and Andréassian, V. (2012), 
-      A review of efficiency criteria suitable for evaluating low-flow simulations, 
-      Journal of Hydrology, 420-421: 171-182, doi:10.1016/j.jhydrol.2011.11.055. \cr
-Santos, L., Thirel, G. and Perrin, C. (2018),
-      Technical note: Pitfalls in using log-transformed flows within the KGE criterion,
-      Hydrol. Earth Syst. Sci., 22, 4583-4591, doi:10.5194/hess-22-4583-2018.
+Pushpalatha, R., Perrin, C., Le Moine, N. and Andréassian, V. (2012). 
+  A review of efficiency criteria suitable for evaluating low-flow simulations. 
+  Journal of Hydrology, 420-421: 171-182. doi:10.1016/j.jhydrol.2011.11.055.
+\cr\cr
+Santos, L., Thirel, G. and Perrin, C. (2018). 
+  Technical note: Pitfalls in using log-transformed flows within the KGE criterion. 
+  Hydrol. Earth Syst. Sci., 22, 4583-4591. doi:10.5194/hess-22-4583-2018.
 }
 
 
diff --git a/man/DataAltiExtrapolation_Valery.Rd b/man/DataAltiExtrapolation_Valery.Rd
index 998416ff..10178828 100644
--- a/man/DataAltiExtrapolation_Valery.Rd
+++ b/man/DataAltiExtrapolation_Valery.Rd
@@ -69,12 +69,17 @@ Laurent Coron, Audrey Valéry, Olivier Delaigue, Pierre Brigode, Guillaume Thire
 
 
 \references{
-Turcotte, R., L.-G. Fortin, V. Fortin, J.-P. Fortin and J.-P. Villeneuve (2007), 
-      Operational analysis of the spatial distribution and the temporal evolution of the snowpack water equivalent 
-      in southern Quebec, Canada, Nordic Hydrology, 38(3), 211, doi:10.2166/nh.2007.009. \cr
-  Valéry, A. (2010), Modélisation précipitations-débit sous influence nivale ? : Elaboration d'un module neige 
-      et évaluation sur 380 bassins versants, PhD thesis (in french), AgroParisTech, Paris, France. \cr
-  USACE (1956), Snow Hydrology, pp. 437, U.S. Army Coprs of Engineers (USACE) North Pacific Division, Portland, Oregon, USA.
+Turcotte, R., L.-G. Fortin, V. Fortin, J.-P. Fortin and J.-P. Villeneuve (2007). 
+  Operational analysis of the spatial distribution and the temporal evolution of the snowpack water equivalent in southern Quebec, Canada,
+  Nordic Hydrology, 38(3), 211. doi:10.2166/nh.2007.009.
+\cr\cr
+Valéry, A. (2010),
+  Modélisation précipitations-débit sous influence nivale ? : Elaboration d'un module neige et évaluation sur 380 bassins versants. 
+  PhD thesis (in french), AgroParisTech, Paris, France.
+\cr\cr
+USACE (1956),
+  Snow Hydrology, pp. 437. 
+  U.S. Army Coprs of Engineers (USACE) North Pacific Division, Portland, Oregon, USA.
 }
 
 
diff --git a/man/ErrorCrit.Rd b/man/ErrorCrit.Rd
index ce5eb3ca..f22ba86a 100644
--- a/man/ErrorCrit.Rd
+++ b/man/ErrorCrit.Rd
@@ -112,6 +112,7 @@ Olivier Delaigue
 
 
 \seealso{
-\code{\link{CreateInputsCrit}}, \code{\link{ErrorCrit_RMSE}}, \code{\link{ErrorCrit_NSE}}, \code{\link{ErrorCrit_KGE}}, \code{\link{ErrorCrit_KGE2}}
+\code{\link{CreateInputsCrit}}, \code{\link{ErrorCrit_RMSE}}, \code{\link{ErrorCrit_NSE}},
+\code{\link{ErrorCrit_KGE}}, \code{\link{ErrorCrit_KGE2}}
 }
 
diff --git a/man/ErrorCrit_KGE.Rd b/man/ErrorCrit_KGE.Rd
index e8e93cf1..016436a9 100644
--- a/man/ErrorCrit_KGE.Rd
+++ b/man/ErrorCrit_KGE.Rd
@@ -105,9 +105,9 @@ Laurent Coron, Olivier Delaigue
 
 
 \references{
-Gupta, H. V., Kling, H., Yilmaz, K. K. and Martinez, G. F. (2009), 
-      Decomposition of the mean squared error and NSE performance criteria: Implications
-      for improving hydrological modelling, Journal of Hydrology, 377(1-2), 80-91, doi:10.1016/j.jhydrol.2009.08.003. \cr
+Gupta, H. V., Kling, H., Yilmaz, K. K. and Martinez, G. F. (2009). 
+  Decomposition of the mean squared error and NSE performance criteria: Implications for improving hydrological modelling. 
+  Journal of Hydrology, 377(1-2), 80-91. doi:10.1016/j.jhydrol.2009.08.003. 
 }
 
 
diff --git a/man/ErrorCrit_KGE2.Rd b/man/ErrorCrit_KGE2.Rd
index f4de6d23..74dd3967 100644
--- a/man/ErrorCrit_KGE2.Rd
+++ b/man/ErrorCrit_KGE2.Rd
@@ -105,12 +105,13 @@ Laurent Coron, Olivier Delaigue
 
 
 \references{
-Gupta, H. V., Kling, H., Yilmaz, K. K. and Martinez, G. F. (2009), 
-      Decomposition of the mean squared error and NSE performance criteria: Implications
-      for improving hydrological modelling, Journal of Hydrology, 377(1-2), 80-91, doi:10.1016/j.jhydrol.2009.08.003. \cr
-  Kling, H., Fuchs, M. and Paulin, M. (2012), 
-      Runoff conditions in the upper Danube basin under an ensemble of climate change scenarios,
-      Journal of Hydrology, 424-425, 264-277, doi:10.1016/j.jhydrol.2012.01.011.
+Gupta, H. V., Kling, H., Yilmaz, K. K. and Martinez, G. F. (2009). 
+  Decomposition of the mean squared error and NSE performance criteria: Implications for improving hydrological modelling. 
+  Journal of Hydrology, 377(1-2), 80-91. doi:10.1016/j.jhydrol.2009.08.003.
+\cr\cr
+Kling, H., Fuchs, M. and Paulin, M. (2012). 
+  Runoff conditions in the upper Danube basin under an ensemble of climate change scenarios. 
+  Journal of Hydrology, 424-425, 264-277. doi:10.1016/j.jhydrol.2012.01.011.
 }
 
 
diff --git a/man/ErrorCrit_NSE.Rd b/man/ErrorCrit_NSE.Rd
index aed41be2..1a5bece6 100644
--- a/man/ErrorCrit_NSE.Rd
+++ b/man/ErrorCrit_NSE.Rd
@@ -96,9 +96,9 @@ OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsMode
 Laurent Coron, Olivier Delaigue
 }
 \references{
-Nash, J.E. and Sutcliffe, J.V. (1970), 
-      River flow forecasting through conceptual models part 1.
-      A discussion of principles, Journal of Hydrology, 10(3), 282-290, doi:10.1016/0022-1694(70)90255-6. \cr
+Nash, J.E. and Sutcliffe, J.V. (1970). 
+      River flow forecasting through conceptual models part 1. 
+      A discussion of principles, Journal of Hydrology, 10(3), 282-290. doi:10.1016/0022-1694(70)90255-6. 
 }
 
 
diff --git a/man/PEdaily_Oudin.Rd b/man/PEdaily_Oudin.Rd
index 60623cb2..3470f603 100644
--- a/man/PEdaily_Oudin.Rd
+++ b/man/PEdaily_Oudin.Rd
@@ -54,9 +54,9 @@ Laurent Coron, Ludovic Oudin, Olivier Delaigue, Guillaume Thirel
 
 
 \references{
-Oudin, L., F. Hervieu, C. Michel, C. Perrin, V. Andréassian, F. Anctil and C. Loumagne (2005),
-      Which potential evapotranspiration input for a lumped rainfall-runoff model?: Part 2-Towards a 
-      simple and efficient potential evapotranspiration model for rainfall-runoff modelling, Journal of Hydrology, 
-      303(1-4), 290-306, doi:10.1016/j.jhydrol.2004.08.026.
+Oudin, L., F. Hervieu, C. Michel, C. Perrin, V. Andréassian, F. Anctil and C. Loumagne (2005). 
+  Which potential evapotranspiration input for a lumped rainfall-runoff model?: 
+  Part 2-Towards a simple and efficient potential evapotranspiration model for rainfall-runoff modelling. 
+  Journal of Hydrology, 303(1-4), 290-306. doi:10.1016/j.jhydrol.2004.08.026.
 }
 
diff --git a/man/Param_Sets_GR4J.Rd b/man/Param_Sets_GR4J.Rd
index 5794bb75..c6e5271e 100644
--- a/man/Param_Sets_GR4J.Rd
+++ b/man/Param_Sets_GR4J.Rd
@@ -31,9 +31,9 @@ As shown in Andréassian et al. (2014; figure 4), only using these parameters se
 
 
 \references{
-Andréassian, V., F. Bourgin, L. Oudin, T. Mathevet, C. Perrin, J. Lerat, L. Coron, L. Berthet (2014).
-      Seeking genericity in the selection of parameter sets: impact on hydrological model efficiency.
-      Water Resources Research, 50(10), 8356-8366, doi: 10.1002/2013WR014761.
+Andréassian, V., F. Bourgin, L. Oudin, T. Mathevet, C. Perrin, J. Lerat, L. Coron, L. Berthet (2014). 
+  Seeking genericity in the selection of parameter sets: impact on hydrological model efficiency. 
+  Water Resources Research, 50(10), 8356-8366. doi: 10.1002/2013WR014761.
 }
 
 
diff --git a/man/RunModel.Rd b/man/RunModel.Rd
index 76d11eb1..e7504cf1 100644
--- a/man/RunModel.Rd
+++ b/man/RunModel.Rd
@@ -67,11 +67,12 @@ OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsMode
 
 
 \author{
-Laurent Coron
+Laurent Coron, Olivier Delaigue
 }
 
 
 \seealso{
-\code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}}, \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
+\code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}}, \code{\link{CreateInputsModel}},
+\code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
 }
 
diff --git a/man/RunModel_CemaNeige.Rd b/man/RunModel_CemaNeige.Rd
index f94ff8cb..3e673fb9 100644
--- a/man/RunModel_CemaNeige.Rd
+++ b/man/RunModel_CemaNeige.Rd
@@ -129,6 +129,7 @@ Valéry, A., V. Andréassian and C. Perrin (2014),
 
 
 \seealso{
-\code{\link{RunModel_CemaNeigeGR4J}}, \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}, \code{\link{CreateCalibOptions}}.
+\code{\link{RunModel_CemaNeigeGR4J}}, \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}},
+\code{\link{CreateIniStates}}, \code{\link{CreateCalibOptions}}.
 }
 
diff --git a/man/RunModel_CemaNeigeGR4J.Rd b/man/RunModel_CemaNeigeGR4J.Rd
index acbd10a6..b4bfd1ba 100644
--- a/man/RunModel_CemaNeigeGR4J.Rd
+++ b/man/RunModel_CemaNeigeGR4J.Rd
@@ -150,22 +150,29 @@ Laurent Coron, Audrey Valéry, Claude Michel, Charles Perrin, Vazken Andréassia
 
 
 \references{
-Perrin, C., C. Michel and V. Andréassian (2003), 
-      Improvement of a parsimonious model for streamflow simulation, 
-      Journal of Hydrology, 279(1-4), 275-289, doi:10.1016/S0022-1694(03)00225-7. \cr
-Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019), 
-      Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses.
-      Journal of Hydrology and Hydromechanics, doi:10.2478/johh-2018-0004, 67, 1, 70–81. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
-      Part 1 - Comparison of six snow accounting routines on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.059. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
-      Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.058.
+Perrin, C., C. Michel and V. Andréassian (2003). 
+  Improvement of a parsimonious model for streamflow simulation. 
+  Journal of Hydrology, 279(1-4), 275-289, doi:10.1016/S0022-1694(03)00225-7.
+\cr\cr
+Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019). 
+  Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses. 
+  Journal of Hydrology and Hydromechanics. doi:10.2478/johh-2018-0004, 67, 1, 70–81.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). 
+  "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
+  Part 1 - Comparison of six snow accounting routines on 380 catchments. 
+  Journal of Hydrology. doi:10.1016/j.jhydrol.2014.04.059.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). 
+  "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
+   Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments. 
+   Journal of Hydrology. doi:10.1016/j.jhydrol.2014.04.058.
 }
 
 
 \seealso{
-\code{\link{RunModel_CemaNeige}},  \code{\link{RunModel_CemaNeigeGR5J}}, \code{\link{RunModel_CemaNeigeGR6J}}, \code{\link{RunModel_GR4J}}, \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
+\code{\link{RunModel_CemaNeige}},  \code{\link{RunModel_CemaNeigeGR5J}},
+\code{\link{RunModel_CemaNeigeGR6J}}, \code{\link{RunModel_GR4J}},
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
 }
 
diff --git a/man/RunModel_CemaNeigeGR5J.Rd b/man/RunModel_CemaNeigeGR5J.Rd
index f899f877..5d4beb04 100644
--- a/man/RunModel_CemaNeigeGR5J.Rd
+++ b/man/RunModel_CemaNeigeGR5J.Rd
@@ -144,21 +144,27 @@ Laurent Coron, Audrey Valéry, Claude Michel, Nicolas Le Moine, Charles Perrin,
 
 
 \references{
-Le Moine, N. (2008),
-      Le bassin versant de surface vu par le souterrain : une voie d'amélioration des performances 
-      et du réalisme des modèles pluie-débit ?, PhD thesis (french), UPMC, Paris, France. \cr
-Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011), 
-      A downward structural sensitivity analysis of hydrological models to improve low-flow simulation, 
-      Journal of Hydrology, 411(1-2), 66-76, doi:10.1016/j.jhydrol.2011.09.034. \cr
-Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019), 
-      Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses.
-      Journal of Hydrology and Hydromechanics, doi:10.2478/johh-2018-0004, 67, 1, 70–81. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
-      Part 1 - Comparison of six snow accounting routines on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.059. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
-      Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.058.
+Le Moine, N. (2008). 
+Le bassin versant de surface vu par le souterrain : une voie d'amélioration des performances et du réalisme des modèles pluie-débit ? 
+      PhD thesis (french), UPMC, Paris, France.
+\cr\cr
+Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011). 
+  A downward structural sensitivity analysis of hydrological models to improve low-flow simulation. 
+  Journal of Hydrology, 411(1-2), 66-76. doi:10.1016/j.jhydrol.2011.09.034.
+\cr\cr
+Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019). 
+  Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses. 
+  Journal of Hydrology and Hydromechanics. doi:10.2478/johh-2018-0004, 67, 1, 70–81.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). 
+  "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
+  Part 1 - Comparison of six snow accounting routines on 380 catchments. 
+  Journal of Hydrology. doi:10.1016/j.jhydrol.2014.04.059.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). 
+  "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
+  Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments. 
+  Journal of Hydrology. doi:10.1016/j.jhydrol.2014.04.058.
 }
 
 
diff --git a/man/RunModel_CemaNeigeGR6J.Rd b/man/RunModel_CemaNeigeGR6J.Rd
index dc2ef16a..0496fa0a 100644
--- a/man/RunModel_CemaNeigeGR6J.Rd
+++ b/man/RunModel_CemaNeigeGR6J.Rd
@@ -154,23 +154,29 @@ Laurent Coron, Audrey Valéry, Claude Michel, Charles Perrin, Raji Pushpalatha,
 
 
 \references{
-Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011), 
-      A downward structural sensitivity analysis of hydrological models to improve low-flow simulation, 
-      Journal of Hydrology, 411(1-2), 66-76, doi:10.1016/j.jhydrol.2011.09.034. \cr
-Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019), 
-      Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses.
-      Journal of Hydrology and Hydromechanics, doi:10.2478/johh-2018-0004, 67, 1, 70–81. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
-      Part 1 - Comparison of six snow accounting routines on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.059. \cr
-Valéry, A., V. Andréassian and C. Perrin (2014), 
-      "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
-      Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments, Journal of Hydrology, doi:10.1016/j.jhydrol.2014.04.058.
+Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011). 
+A downward structural sensitivity analysis of hydrological models to improve low-flow simulation.
+Journal of Hydrology, 411(1-2), 66-76. doi:10.1016/j.jhydrol.2011.09.034.
+\cr\cr
+Riboust, P., G. Thirel, N. Le Moine and P. Ribstein (2019). 
+  Revisiting a simple degree-day model for integrating satellite data: implementation of SWE-SCA hystereses. 
+  Journal of Hydrology and Hydromechanics. doi:10.2478/johh-2018-0004, 67, 1, 70–81.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). 
+  "As simple as possible but not simpler": what is useful in a temperature-based snow-accounting routine? 
+  Part 1 - Comparison of six snow accounting routines on 380 catchments. 
+  Journal of Hydrology.  doi:10.1016/j.jhydrol.2014.04.059.
+\cr\cr
+Valéry, A., V. Andréassian and C. Perrin (2014). *
+  "As simple as possible but not simpler": What is useful in a temperature-based snow-accounting routine? 
+  Part 2 - Sensitivity analysis of the Cemaneige snow accounting routine on 380 catchments. 
+  Journal of Hydrology. doi:10.1016/j.jhydrol.2014.04.058.
 }
 
 
 \seealso{
-\code{\link{RunModel_CemaNeige}}, \code{\link{RunModel_CemaNeigeGR4J}}, \code{\link{RunModel_CemaNeigeGR5J}}, \code{\link{RunModel_GR6J}},
-         \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}.
+\code{\link{RunModel_CemaNeige}}, \code{\link{RunModel_CemaNeigeGR4J}}, 
+\code{\link{RunModel_CemaNeigeGR5J}}, \code{\link{RunModel_GR6J}}, 
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}.
 }
 
diff --git a/man/RunModel_GR1A.Rd b/man/RunModel_GR1A.Rd
index 23ce6b99..fb74dd25 100644
--- a/man/RunModel_GR1A.Rd
+++ b/man/RunModel_GR1A.Rd
@@ -99,9 +99,9 @@ Laurent Coron, Claude Michel
 
 
 \references{
-Mouelhi S. (2003), 
-      Vers une chaîne cohérente de modèles pluie-débit conceptuels globaux aux pas de temps pluriannuel, annuel, mensuel et journalier,
-      PhD thesis (in French), ENGREF, Cemagref Antony, France. \cr
+Mouelhi S. (2003). 
+  Vers une chaîne cohérente de modèles pluie-débit conceptuels globaux aux pas de temps pluriannuel, annuel, mensuel et journalier. 
+  PhD thesis (in French), ENGREF, Cemagref Antony, France.
 }
 
 
diff --git a/man/RunModel_GR2M.Rd b/man/RunModel_GR2M.Rd
index ae5916f9..4a75e41a 100644
--- a/man/RunModel_GR2M.Rd
+++ b/man/RunModel_GR2M.Rd
@@ -105,12 +105,13 @@ Laurent Coron, Claude Michel, Safouane Mouelhi
 
 
 \references{
-Mouelhi S. (2003), 
-      Vers une chaîne cohérente de modèles pluie-débit conceptuels globaux aux pas de temps pluriannuel, annuel, mensuel et journalier,
-      PhD thesis (in French), ENGREF, Cemagref Antony, France. \cr
-  Mouelhi, S., C. Michel, C. Perrin and V. Andréassian (2006),
-      Stepwise development of a two-parameter monthly water balance model,
-      Journal of Hydrology, 318(1-4), 200-214, doi:10.1016/j.jhydrol.2005.06.014.
+Mouelhi S. (2003). 
+  Vers une chaîne cohérente de modèles pluie-débit conceptuels globaux aux pas de temps pluriannuel, annuel, mensuel et journalier. 
+  PhD thesis (in French), ENGREF, Cemagref Antony, France.
+\cr\cr
+Mouelhi, S., C. Michel, C. Perrin and V. Andréassian (2006). 
+  Stepwise development of a two-parameter monthly water balance model. 
+  Journal of Hydrology, 318(1-4), 200-214. doi:10.1016/j.jhydrol.2005.06.014.
 }
 
 
diff --git a/man/RunModel_GR4H.Rd b/man/RunModel_GR4H.Rd
index b9e9405c..5ee82864 100644
--- a/man/RunModel_GR4H.Rd
+++ b/man/RunModel_GR4H.Rd
@@ -101,11 +101,15 @@ Laurent Coron, Charles Perrin, Thibaut Mathevet
 
 
 \references{
-Mathevet, T. (2005), 
-      Quels modèles pluie-débit globaux pour le pas de temps horaire ? Développement empirique et comparaison de modèles sur un large échantillon de bassins versants, 
-      PhD thesis (in French), ENGREF - Cemagref (Antony), Paris, France. \cr 
-Le Moine, N. (2008), Le bassin versant de surface vu par le souterrain : une voie d'amélioration des performances
-      et du réalisme des modèles pluie-débit ?, PhD thesis (french), UPMC, Paris, France. \cr      
+Mathevet, T. (2005). 
+  Quels modèles pluie-débit globaux pour le pas de temps horaire ? 
+  Développement empirique et comparaison de modèles sur un large échantillon de bassins versants. 
+  PhD thesis (in French), ENGREF - Cemagref (Antony), Paris, France.
+\cr\cr
+Le Moine, N. (2008). 
+  Le bassin versant de surface vu par le souterrain : 
+  une voie d'amélioration des performances et du réalisme des modèles pluie-débit ?
+  PhD thesis (french), UPMC, Paris, France.
 }
 
 
diff --git a/man/RunModel_GR4J.Rd b/man/RunModel_GR4J.Rd
index cda342e2..81ff3ad3 100644
--- a/man/RunModel_GR4J.Rd
+++ b/man/RunModel_GR4J.Rd
@@ -110,14 +110,14 @@ Laurent Coron, Claude Michel, Charles Perrin
 
 
 \references{
-Perrin, C., C. Michel and V. Andréassian (2003), 
-      Improvement of a parsimonious model for streamflow simulation, 
-      Journal of Hydrology, 279(1-4), 275-289, doi:10.1016/S0022-1694(03)00225-7.
+Perrin, C., C. Michel and V. Andréassian (2003). 
+  Improvement of a parsimonious model for streamflow simulation. 
+  Journal of Hydrology, 279(1-4), 275-289. doi:10.1016/S0022-1694(03)00225-7.
 }
 
 
 \seealso{
 \code{\link{RunModel_GR5J}}, \code{\link{RunModel_GR6J}}, \code{\link{RunModel_CemaNeigeGR4J}},
-         \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
 }
 
diff --git a/man/RunModel_GR5J.Rd b/man/RunModel_GR5J.Rd
index b7dadddb..044bff27 100644
--- a/man/RunModel_GR5J.Rd
+++ b/man/RunModel_GR5J.Rd
@@ -111,11 +111,14 @@ Laurent Coron, Claude Michel, Nicolas Le Moine
 
 
 \references{
-Le Moine, N. (2008), Le bassin versant de surface vu par le souterrain : une voie d'amélioration des performances
-      et du réalisme des modèles pluie-débit ?, PhD thesis (french), UPMC, Paris, France. \cr
-Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet, and V. Andréassian (2011), 
-      A downward structural sensitivity analysis of hydrological models to improve low-flow simulation, 
-      Journal of Hydrology, 411(1-2), 66-76, doi:10.1016/j.jhydrol.2011.09.034. \cr
+Le Moine, N. (2008). 
+  Le bassin versant de surface vu par le souterrain : 
+  une voie d'amélioration des performances et du réalisme des modèles pluie-débit ? 
+  PhD thesis (french), UPMC, Paris, France.
+\cr\cr
+Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet, and V. Andréassian (2011). 
+  A downward structural sensitivity analysis of hydrological models to improve low-flow simulation. 
+  Journal of Hydrology, 411(1-2), 66-76. doi:10.1016/j.jhydrol.2011.09.034.
 }
 
 
diff --git a/man/RunModel_GR6J.Rd b/man/RunModel_GR6J.Rd
index d4c3a79c..4f3229bd 100644
--- a/man/RunModel_GR6J.Rd
+++ b/man/RunModel_GR6J.Rd
@@ -114,14 +114,14 @@ Laurent Coron, Claude Michel, Charles Perrin, Raji Pushpalatha, Nicolas Le Moine
 
 
 \references{
-Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011), 
-      A downward structural sensitivity analysis of hydrological models to improve low-flow simulation, 
-      Journal of Hydrology, 411(1-2), 66-76, doi:10.1016/j.jhydrol.2011.09.034. \cr
+Pushpalatha, R., C. Perrin, N. Le Moine, T. Mathevet and V. Andréassian (2011). 
+  A downward structural sensitivity analysis of hydrological models to improve low-flow simulation. 
+  Journal of Hydrology, 411(1-2), 66-76. doi:10.1016/j.jhydrol.2011.09.034.
 }
 
 
 \seealso{
 \code{\link{RunModel_GR4J}}, \code{\link{RunModel_GR5J}}, \code{\link{RunModel_CemaNeigeGR6J}},
-         \code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
+\code{\link{CreateInputsModel}}, \code{\link{CreateRunOptions}}, \code{\link{CreateIniStates}}.
 }
 
-- 
GitLab