From 20209f8a7983be0779cf7b2fa0a5e6ad84efed10 Mon Sep 17 00:00:00 2001
From: Delaigue Olivier <olivier.delaigue@irstea.priv>
Date: Mon, 1 Apr 2019 12:00:18 +0200
Subject: [PATCH] v1.2.12.26 DOC: remove optional uses of varObs in many
 examples

---
 DESCRIPTION                   | 2 +-
 NEWS.rmd                      | 2 +-
 man/Calibration.Rd            | 6 +++---
 man/Calibration_Michel.Rd     | 6 +++---
 man/CreateCalibOptions.Rd     | 6 +++---
 man/CreateInputsModel.Rd      | 2 +-
 man/CreateRunOptions.Rd       | 2 +-
 man/RunModel.Rd               | 2 +-
 man/RunModel_CemaNeigeGR4J.Rd | 4 ++--
 man/RunModel_CemaNeigeGR5J.Rd | 4 ++--
 man/RunModel_CemaNeigeGR6J.Rd | 4 ++--
 man/RunModel_GR1A.Rd          | 2 +-
 man/RunModel_GR2M.Rd          | 2 +-
 man/RunModel_GR4H.Rd          | 2 +-
 man/RunModel_GR4J.Rd          | 2 +-
 man/RunModel_GR5J.Rd          | 2 +-
 man/RunModel_GR6J.Rd          | 2 +-
 17 files changed, 26 insertions(+), 26 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 205afbf1..f1c39eb7 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: airGR
 Type: Package
 Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling
-Version: 1.2.12.25
+Version: 1.2.12.26
 Date: 2019-04-01
 Authors@R: c(
   person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")),
diff --git a/NEWS.rmd b/NEWS.rmd
index b82b25c5..078d8f1d 100644
--- a/NEWS.rmd
+++ b/NEWS.rmd
@@ -13,7 +13,7 @@ output:
 
 
 
-### 1.2.12.25 Release Notes (2019-04-01) 
+### 1.2.12.26 Release Notes (2019-04-01) 
 
 
 
diff --git a/man/Calibration.Rd b/man/Calibration.Rd
index 230a08c8..75f62a30 100644
--- a/man/Calibration.Rd
+++ b/man/Calibration.Rd
@@ -65,7 +65,7 @@ RunOptions <- CreateRunOptions(FUN_MOD = RunModel_GR4J,
 
 ## calibration criterion: preparation of the InputsCrit object
 InputsCrit <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 
 ## preparation of CalibOptions object
 CalibOptions <- CreateCalibOptions(FUN_MOD = RunModel_GR4J, FUN_CALIB = Calibration_Michel)
@@ -86,12 +86,12 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 ## efficiency criterion: Kling-Gupta Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_KGE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_KGE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/Calibration_Michel.Rd b/man/Calibration_Michel.Rd
index 85870d7a..61cd24b0 100644
--- a/man/Calibration_Michel.Rd
+++ b/man/Calibration_Michel.Rd
@@ -96,7 +96,7 @@ RunOptions <- CreateRunOptions(FUN_MOD = RunModel_GR4J, InputsModel = InputsMode
 
 ## calibration criterion: preparation of the InputsCrit object
 InputsCrit <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 
 ## preparation of CalibOptions object
 CalibOptions <- CreateCalibOptions(FUN_MOD = RunModel_GR4J, FUN_CALIB = Calibration_Michel)
@@ -116,12 +116,12 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 ## efficiency criterion: Kling-Gupta Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_KGE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_KGE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/CreateCalibOptions.Rd b/man/CreateCalibOptions.Rd
index 4ab48f35..6d99635b 100644
--- a/man/CreateCalibOptions.Rd
+++ b/man/CreateCalibOptions.Rd
@@ -105,7 +105,7 @@ RunOptions <- CreateRunOptions(FUN_MOD = RunModel_GR4J,
 
 ## calibration criterion: preparation of the InputsCrit object
 InputsCrit <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                               RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 
 ## preparation of CalibOptions object
 CalibOptions <- CreateCalibOptions(FUN_MOD = RunModel_GR4J, FUN_CALIB = Calibration_Michel)
@@ -126,12 +126,12 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 ## efficiency criterion: Kling-Gupta Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_KGE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_KGE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/CreateInputsModel.Rd b/man/CreateInputsModel.Rd
index a93f5130..d62c11aa 100644
--- a/man/CreateInputsModel.Rd
+++ b/man/CreateInputsModel.Rd
@@ -95,7 +95,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/CreateRunOptions.Rd b/man/CreateRunOptions.Rd
index 716743ad..0f33442b 100644
--- a/man/CreateRunOptions.Rd
+++ b/man/CreateRunOptions.Rd
@@ -145,7 +145,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
                                 RunOptions = RunOptions,
-                                Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel.Rd b/man/RunModel.Rd
index 079f21ca..7cb4b501 100644
--- a/man/RunModel.Rd
+++ b/man/RunModel.Rd
@@ -61,7 +61,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_CemaNeigeGR4J.Rd b/man/RunModel_CemaNeigeGR4J.Rd
index 23ebb869..9f627a94 100644
--- a/man/RunModel_CemaNeigeGR4J.Rd
+++ b/man/RunModel_CemaNeigeGR4J.Rd
@@ -118,7 +118,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 
@@ -139,7 +139,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_CemaNeigeGR5J.Rd b/man/RunModel_CemaNeigeGR5J.Rd
index 7584f332..7442ee5c 100644
--- a/man/RunModel_CemaNeigeGR5J.Rd
+++ b/man/RunModel_CemaNeigeGR5J.Rd
@@ -116,7 +116,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 
@@ -133,7 +133,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_CemaNeigeGR6J.Rd b/man/RunModel_CemaNeigeGR6J.Rd
index 8969f3b2..57a8f919 100644
--- a/man/RunModel_CemaNeigeGR6J.Rd
+++ b/man/RunModel_CemaNeigeGR6J.Rd
@@ -122,7 +122,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 
 
@@ -143,7 +143,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR1A.Rd b/man/RunModel_GR1A.Rd
index ac155c02..e2afa825 100644
--- a/man/RunModel_GR1A.Rd
+++ b/man/RunModel_GR1A.Rd
@@ -88,7 +88,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR2M.Rd b/man/RunModel_GR2M.Rd
index 09f1c891..c04b3594 100644
--- a/man/RunModel_GR2M.Rd
+++ b/man/RunModel_GR2M.Rd
@@ -94,7 +94,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR4H.Rd b/man/RunModel_GR4H.Rd
index 2d574865..4109c37f 100644
--- a/man/RunModel_GR4H.Rd
+++ b/man/RunModel_GR4H.Rd
@@ -90,7 +90,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel,
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR4J.Rd b/man/RunModel_GR4J.Rd
index d26c72b0..c91fb0c1 100644
--- a/man/RunModel_GR4J.Rd
+++ b/man/RunModel_GR4J.Rd
@@ -99,7 +99,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR5J.Rd b/man/RunModel_GR5J.Rd
index 487dd904..cd2673ca 100644
--- a/man/RunModel_GR5J.Rd
+++ b/man/RunModel_GR5J.Rd
@@ -100,7 +100,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
diff --git a/man/RunModel_GR6J.Rd b/man/RunModel_GR6J.Rd
index d87caa09..00b03a4f 100644
--- a/man/RunModel_GR6J.Rd
+++ b/man/RunModel_GR6J.Rd
@@ -103,7 +103,7 @@ plot(OutputsModel, Qobs = BasinObs$Qmm[Ind_Run])
 
 ## efficiency criterion: Nash-Sutcliffe Efficiency
 InputsCrit  <- CreateInputsCrit(FUN_CRIT = ErrorCrit_NSE, InputsModel = InputsModel, 
-                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run], varObs = "Q")
+                                RunOptions = RunOptions, Obs = BasinObs$Qmm[Ind_Run])
 OutputsCrit <- ErrorCrit_NSE(InputsCrit = InputsCrit, OutputsModel = OutputsModel)
 }
 
-- 
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