diff --git a/DESCRIPTION b/DESCRIPTION
index de8de46d95f4bdabec98a1f591d6fd7bfdf49df7..37c96600a7a0cc47e96e3f1fbb7cb4b108537e5f 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,8 +1,8 @@
Package: airGR
Type: Package
Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling
-Version: 1.6.3.53
-Date: 2020-11-11
+Version: 1.6.3.54
+Date: 2020-11-12
Authors@R: c(
person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")),
person("Olivier", "Delaigue", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7668-8468"), email = "airGR@inrae.fr"),
diff --git a/NEWS.md b/NEWS.md
index 18b21a79694189c1e0c27ea559e42d9f01ff4196..64c53d10a858ec6e7b145c061ccd29670eab0ce7 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -4,7 +4,7 @@
-### 1.6.3.53 Release Notes (2020-11-11)
+### 1.6.3.54 Release Notes (2020-11-12)
#### New features
diff --git a/R/RunModel_GR1A.R b/R/RunModel_GR1A.R
index f502410d9a55cab38c1e5682d3163e0b30661955..8e973fcc59309636f2025dd59c932dc288c45c62 100644
--- a/R/RunModel_GR1A.R
+++ b/R/RunModel_GR1A.R
@@ -51,7 +51,7 @@ RunModel_GR1A <- function(InputsModel, RunOptions, Param) {
## Call_fortan
- RESULTS <- .Fortran("frun_gr1a", PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr1a", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/y]
@@ -63,7 +63,7 @@ RunModel_GR1A <- function(InputsModel, RunOptions, Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999), nrow = LInputSeries,ncol=length(IndOutputs)), ### output series [mm]
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol=length(IndOutputs)), ### output series [mm]
StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA
@@ -78,20 +78,20 @@ RunModel_GR1A <- function(InputsModel, RunOptions, Param) {
}
## DatesR and OutputsModel only
if (ExportDatesR & !ExportStateEnd) {
- OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]))
names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs])
}
## OutputsModel and SateEnd only
if (!ExportDatesR & ExportStateEnd) {
- OutputsModel <- c(lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
+ OutputsModel <- c(lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd))
names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd")
}
## DatesR and OutputsModel and SateEnd
if ((ExportDatesR & ExportStateEnd) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
+ OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd))
names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd")
}
diff --git a/R/RunModel_GR2M.R b/R/RunModel_GR2M.R
index c0955435c1145889c442c09e3a5894234c8b8110..cc889d1882e3b06dd28aeb5a5acb5a6b313a93b1 100644
--- a/R/RunModel_GR2M.R
+++ b/R/RunModel_GR2M.R
@@ -1,4 +1,4 @@
-RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
+RunModel_GR2M <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -7,13 +7,13 @@ RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"monthly" ) == FALSE) { stop("'InputsModel' must be of class 'monthly' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "monthly" ) == FALSE) { stop("'InputsModel' must be of class 'monthly' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X2_threshold <- 1e-2
@@ -27,8 +27,8 @@ RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -45,7 +45,7 @@ RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr2M",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr2M", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/month]
@@ -57,16 +57,16 @@ RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs [round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs [round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR2M, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
- UH1 = NULL, UH2 = NULL,
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR2M, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
+ UH1 = NULL, UH2 = NULL,
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
@@ -74,28 +74,28 @@ RunModel_GR2M <- function(InputsModel,RunOptions,Param) {
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_SateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_SateEnd
if ((ExportDatesR==TRUE & ExportStateEnd==TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","monthly","GR");
+ class(OutputsModel) <- c("OutputsModel", "monthly", "GR");
return(OutputsModel);
}
diff --git a/R/RunModel_GR4H.R b/R/RunModel_GR4H.R
index 3f11612a2e5f5bd594c670306f7b0af1c86ae84b..7f2f8c078146b1463b439847e56035a3f5efffd3 100644
--- a/R/RunModel_GR4H.R
+++ b/R/RunModel_GR4H.R
@@ -1,4 +1,4 @@
-RunModel_GR4H <- function(InputsModel,RunOptions,Param) {
+RunModel_GR4H <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -7,13 +7,13 @@ RunModel_GR4H <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"hourly" ) == FALSE) { stop("'InputsModel' must be of class 'hourly' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "hourly" ) == FALSE) { stop("'InputsModel' must be of class 'hourly' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X3_threshold <- 1e-2
@@ -32,8 +32,8 @@ RunModel_GR4H <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -50,7 +50,7 @@ RunModel_GR4H <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr4h",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr4h", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/h]
@@ -62,45 +62,45 @@ RunModel_GR4H <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs[ round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR4H, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
- UH1 = RESULTS$StateEnd[(1:(20*24))+7], UH2 = RESULTS$StateEnd[(1:(40*24))+(7+20*24)],
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR4H, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
+ UH1 = RESULTS$StateEnd[(1:(20*24))+7], UH2 = RESULTS$StateEnd[(1:(40*24))+(7+20*24)],
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_SateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_SateEnd
if ((ExportDatesR == TRUE & ExportStateEnd == TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","hourly","GR");
+ class(OutputsModel) <- c("OutputsModel", "hourly", "GR");
return(OutputsModel);
}
diff --git a/R/RunModel_GR4J.R b/R/RunModel_GR4J.R
index ce7fc48900ecec9e5d465a5493562398754539c2..8d8c5da6f7cd209ff0693d855f7eafe8c50f857f 100644
--- a/R/RunModel_GR4J.R
+++ b/R/RunModel_GR4J.R
@@ -1,4 +1,4 @@
-RunModel_GR4J <- function(InputsModel,RunOptions,Param) {
+RunModel_GR4J <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -7,13 +7,13 @@ RunModel_GR4J <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X3_threshold <- 1e-2
@@ -32,8 +32,8 @@ RunModel_GR4J <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -49,7 +49,7 @@ RunModel_GR4J <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr4j",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr4j", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/d]
@@ -61,45 +61,45 @@ RunModel_GR4J <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs[ round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR4J, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
- UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR4J, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
+ UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_StateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_StateEnd
if ((ExportDatesR == TRUE & ExportStateEnd == TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","daily","GR");
+ class(OutputsModel) <- c("OutputsModel", "daily", "GR");
return(OutputsModel);
}
diff --git a/R/RunModel_GR5H.R b/R/RunModel_GR5H.R
index 6d548944ea803bf70911f0379fd44c21b1209c8d..e8295302ee4cbeef0ef2e3588b7410918b07eeec 100644
--- a/R/RunModel_GR5H.R
+++ b/R/RunModel_GR5H.R
@@ -1,4 +1,4 @@
-RunModel_GR5H <- function(InputsModel,RunOptions,Param) {
+RunModel_GR5H <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -13,13 +13,13 @@ RunModel_GR5H <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"hourly" ) == FALSE) { stop("'InputsModel' must be of class 'hourly' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "hourly" ) == FALSE) { stop("'InputsModel' must be of class 'hourly' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X3_threshold <- 1e-2
@@ -38,8 +38,8 @@ RunModel_GR5H <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -59,7 +59,7 @@ RunModel_GR5H <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr5h",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr5h", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/h]
@@ -72,46 +72,46 @@ RunModel_GR5H <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm or mm/h]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm or mm/h]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs[ round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR5H, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
- IntStore = RESULTS$StateEnd[4L],
- UH1 = NULL, UH2 = RESULTS$StateEnd[(1:(40*24))+(7+20*24)],
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR5H, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
+ IntStore = RESULTS$StateEnd[4L],
+ UH1 = NULL, UH2 = RESULTS$StateEnd[(1:(40*24))+(7+20*24)],
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_StateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_StateEnd
if ((ExportDatesR == TRUE & ExportStateEnd == TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","hourly","GR");
+ class(OutputsModel) <- c("OutputsModel", "hourly", "GR");
if (IsIntStore) {
class(OutputsModel) <- c(class(OutputsModel), "interception")
}
diff --git a/R/RunModel_GR5J.R b/R/RunModel_GR5J.R
index a67b07d77f648d28f7d69c26e3e38a1efd88fac6..ba94d13fb090f258f917d1b5fa87ee18e7c15cd4 100644
--- a/R/RunModel_GR5J.R
+++ b/R/RunModel_GR5J.R
@@ -1,4 +1,4 @@
-RunModel_GR5J <- function(InputsModel,RunOptions,Param) {
+RunModel_GR5J <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -7,13 +7,13 @@ RunModel_GR5J <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X3_threshold <- 1e-2
@@ -32,8 +32,8 @@ RunModel_GR5J <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -50,7 +50,7 @@ RunModel_GR5J <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr5j",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr5j", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/d]
@@ -62,45 +62,45 @@ RunModel_GR5J <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs[ round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR5J, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
- UH1 = NULL, UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR5J, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = NULL,
+ UH1 = NULL, UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_SateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_SateEnd
if ((ExportDatesR == TRUE & ExportStateEnd == TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","daily","GR");
+ class(OutputsModel) <- c("OutputsModel", "daily", "GR");
return(OutputsModel);
}
diff --git a/R/RunModel_GR6J.R b/R/RunModel_GR6J.R
index b69f5c2cf14e5c61551bca992aded29b60d8d443..2a43efc17e18d7c49738fce41a17c42090b0ae68 100644
--- a/R/RunModel_GR6J.R
+++ b/R/RunModel_GR6J.R
@@ -1,4 +1,4 @@
-RunModel_GR6J <- function(InputsModel,RunOptions,Param) {
+RunModel_GR6J <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
@@ -7,13 +7,13 @@ RunModel_GR6J <- function(InputsModel,RunOptions,Param) {
## Arguments_check
- if (inherits(InputsModel,"InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
- if (inherits(InputsModel,"daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
- if (inherits(InputsModel,"GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
- if (inherits(RunOptions,"RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
- if (inherits(RunOptions,"GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
+ if (inherits(InputsModel, "InputsModel") == FALSE) { stop("'InputsModel' must be of class 'InputsModel'") }
+ if (inherits(InputsModel, "daily" ) == FALSE) { stop("'InputsModel' must be of class 'daily' ") }
+ if (inherits(InputsModel, "GR" ) == FALSE) { stop("'InputsModel' must be of class 'GR' ") }
+ if (inherits(RunOptions, "RunOptions" ) == FALSE) { stop("'RunOptions' must be of class 'RunOptions' ") }
+ if (inherits(RunOptions, "GR" ) == FALSE) { stop("'RunOptions' must be of class 'GR' ") }
if (!is.vector(Param) | !is.numeric(Param)) { stop("'Param' must be a numeric vector") }
- if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep = "")) }
+ if (sum(!is.na(Param)) != NParam) { stop(paste("'Param' must be a vector of length ", NParam, " and contain no NA", sep = "")) }
Param <- as.double(Param);
Param_X1X3X6_threshold <- 1e-2
@@ -36,8 +36,8 @@ RunModel_GR6J <- function(InputsModel,RunOptions,Param) {
}
## Input_data_preparation
- if (identical(RunOptions$IndPeriod_WarmUp,as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
- IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run);
+ if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) { RunOptions$IndPeriod_WarmUp <- NULL; }
+ IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp, RunOptions$IndPeriod_Run);
LInputSeries <- as.integer(length(IndPeriod1))
if ("all" %in% RunOptions$Outputs_Sim) { IndOutputs <- as.integer(1:length(FortranOutputs));
} else { IndOutputs <- which(FortranOutputs %in% RunOptions$Outputs_Sim); }
@@ -55,7 +55,7 @@ RunModel_GR6J <- function(InputsModel,RunOptions,Param) {
}
## Call_fortan
- RESULTS <- .Fortran("frun_gr6j",PACKAGE = "airGR",
+ RESULTS <- .Fortran("frun_gr6j", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = InputsModel$Precip[IndPeriod1], ### input series of total precipitation [mm/d]
@@ -67,45 +67,45 @@ RunModel_GR6J <- function(InputsModel,RunOptions,Param) {
NOutputs = as.integer(length(IndOutputs)), ### number of output series
IndOutputs = IndOutputs, ### indices of output series
## outputs
- Outputs = matrix(as.double(-999.999),nrow = LInputSeries,ncol = length(IndOutputs)), ### output series [mm]
- StateEnd = rep(as.double(-999.999),length(RunOptions$IniStates)) ### state variables at the end of the model run
+ Outputs = matrix(as.double(-999.999), nrow = LInputSeries, ncol = length(IndOutputs)), ### output series [mm]
+ StateEnd = rep(as.double(-999.999), length(RunOptions$IniStates)) ### state variables at the end of the model run
)
- RESULTS$Outputs[ round(RESULTS$Outputs ,3) == (-999.999)] <- NA;
- RESULTS$StateEnd[round(RESULTS$StateEnd,3) == (-999.999)] <- NA;
+ RESULTS$Outputs[ round(RESULTS$Outputs , 3) == (-999.999)] <- NA;
+ RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == (-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
- RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR6J, InputsModel = InputsModel,
- ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = RESULTS$StateEnd[3L],
- UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
- GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
+ RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_GR6J, InputsModel = InputsModel,
+ ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = RESULTS$StateEnd[3L],
+ UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
+ GCemaNeigeLayers = NULL, eTGCemaNeigeLayers = NULL,
verbose = FALSE)
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
- OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
+ OutputsModel <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]);
names(OutputsModel) <- FortranOutputs[IndOutputs]; }
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs]); }
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]) );
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs]); }
## OutputsModel_and_SateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
- OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c(FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c(FortranOutputs[IndOutputs], "StateEnd"); }
## DatesR_and_OutputsModel_and_SateEnd
if ((ExportDatesR == TRUE & ExportStateEnd == TRUE) | "all" %in% RunOptions$Outputs_Sim) {
- OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
+ OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
+ lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(RESULTS$StateEnd) );
- names(OutputsModel) <- c("DatesR",FortranOutputs[IndOutputs],"StateEnd"); }
+ names(OutputsModel) <- c("DatesR", FortranOutputs[IndOutputs], "StateEnd"); }
## End
rm(RESULTS);
- class(OutputsModel) <- c("OutputsModel","daily","GR");
+ class(OutputsModel) <- c("OutputsModel", "daily", "GR");
return(OutputsModel);
}