From 8e47527e7e88fa2d0d4dc6e19cb7f66fef2cc892 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Fr=C3=A9d=C3=A9ric=20Grelot?= <frederic.grelot@irstea.fr>
Date: Tue, 6 Feb 2024 14:22:15 +0100
Subject: [PATCH] MAJ dev + docs

---
 dev/package.development.R       | 12 ++++++++++--
 docs/articles/gaspar_fr.html    |  8 ++++----
 docs/news/index.html            |  9 +++++++++
 docs/pkgdown.yml                |  2 +-
 docs/reference/add_journal.html | 26 +++++++++++++-------------
 5 files changed, 37 insertions(+), 20 deletions(-)

diff --git a/dev/package.development.R b/dev/package.development.R
index 28aa968..7602961 100644
--- a/dev/package.development.R
+++ b/dev/package.development.R
@@ -1,5 +1,13 @@
-package = "floodam.data" ; devtools::document(package) ; devtools::load_all(package)
-sche
+{
+    package = "floodam.data"
+    devtools::document(package)
+    devtools::load_all(package)
+}
+
+### Testing
+# usethis::use_testthat()
+devtools::test(package)
+
 ### Vignettes
 # setwd(package):usethis::use_vignette(package);setwd("..")
 devtools::build_vignettes(package)
diff --git a/docs/articles/gaspar_fr.html b/docs/articles/gaspar_fr.html
index 216247f..95f539a 100644
--- a/docs/articles/gaspar_fr.html
+++ b/docs/articles/gaspar_fr.html
@@ -202,8 +202,8 @@
 </tbody>
 </table>
 <p>Le type de risque (“num_risque_jo” dans la nomemclature d’oririgine et ‘catnat’ dans la nomenclature après traitement) est codifié selon les deux premières colonnes du tableau @ref(tab:catnat-classification). La variable ‘catnat’ correspond à la codification du type de risque utilisé lors de la publication dans le journal officiel.</p>
-<div class="datatables html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-d51d0f48751e6e3d5dee" style="width:100%;height:auto;"></div>
-<script type="application/json" data-for="htmlwidget-d51d0f48751e6e3d5dee">{"x":{"filter":"none","vertical":false,"caption":"<caption>Classification des événements pour le thème catnat<\/caption>","data":[["ALS","AVA","CMV","COB","DIV","ECB","EFA","VOL","GLT","GER","GET","GRL","ICB","IRN","LVT","MVT","PDN","RAZ","SEC","SEI","TMP","VCY"],["Algues Sargasses","Avalanche","Chocs Mécaniques liés à l'action des Vagues","Coulée de Boue","Divers","Eboulement et/ou Chute de Blocs","Effondrement et/ou Affaisement","Eruption Volcanique","Glissement de Terrain","Glissement et Eboulement Rocheux","Glissement et Effondrement de Terrain","Grêle","Inondations et/ou Coulées de Boue","Inondations Remontée Nappe","Lave Torrentielle","Mouvement de Terrain","Poids de la Neige","Raz de Marée","Sécheresse","Secousse Sismique","Tempête","Vents Cycloniques"],[false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false],[false,false,false,true,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false],[false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>catnat<\/th>\n      <th>catnat_label_fr<\/th>\n      <th>flooding<\/th>\n      <th>mudslide<\/th>\n      <th>water_table<\/th>\n      <th>torrential<\/th>\n      <th>submersion<\/th>\n      <th>hurricane<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script>
+<div class="datatables html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-ec3ddce543512c86240f" style="width:100%;height:auto;"></div>
+<script type="application/json" data-for="htmlwidget-ec3ddce543512c86240f">{"x":{"filter":"none","vertical":false,"caption":"<caption>Classification des événements pour le thème catnat<\/caption>","data":[["ALS","AVA","CMV","COB","DIV","ECB","EFA","VOL","GLT","GER","GET","GRL","ICB","IRN","LVT","MVT","PDN","RAZ","SEC","SEI","TMP","VCY"],["Algues Sargasses","Avalanche","Chocs Mécaniques liés à l'action des Vagues","Coulée de Boue","Divers","Eboulement et/ou Chute de Blocs","Effondrement et/ou Affaisement","Eruption Volcanique","Glissement de Terrain","Glissement et Eboulement Rocheux","Glissement et Effondrement de Terrain","Grêle","Inondations et/ou Coulées de Boue","Inondations Remontée Nappe","Lave Torrentielle","Mouvement de Terrain","Poids de la Neige","Raz de Marée","Sécheresse","Secousse Sismique","Tempête","Vents Cycloniques"],[false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false],[false,false,false,true,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false],[false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>catnat<\/th>\n      <th>catnat_label_fr<\/th>\n      <th>flooding<\/th>\n      <th>mudslide<\/th>\n      <th>water_table<\/th>\n      <th>torrential<\/th>\n      <th>submersion<\/th>\n      <th>hurricane<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script>
 </div>
 <div class="section level3">
 <h3 id="thème-pprn">Thème “pprn”<a class="anchor" aria-label="anchor" href="#th%C3%A8me-pprn"></a>
@@ -569,8 +569,8 @@ date de mise à jour de la fiche gaspar
 </tbody>
 </table>
 <p>Le type de risque (“num_risque” dans la nomemclature d’oririgine et “hazard” dans la nomenclature après traitement) est codifié selon les deux premières colonnes du tableau @ref(tab:pprn-classification).</p>
-<div class="datatables html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-ae792f292dc8e74a29b8" style="width:100%;height:auto;"></div>
-<script type="application/json" data-for="htmlwidget-ae792f292dc8e74a29b8">{"x":{"filter":"none","vertical":false,"caption":"<caption>Classification des événements pour le thème pprn<\/caption>","data":[["180","140","134","143","183","147","130","285","135","157","158","159","166","131","286","152","153","194","195","288","252","129","160","168","167"],["Par une crue à débordement lent de cours d'eau","Inondation","Mouvement de terrain","Eboulement ou chutes de pierres et de blocs","Par une crue torrentielle ou à montée rapide de cours d'eau","Glissement de terrain","Par ruissellement et coulée de boue","Par remontées de nappes naturelles","Affaissements et effondrements (cavités souterraines hors mines)","Tassements différentiels","Séisme","Avalanche","Feu de forêt","Par lave torrentielle (torrent et talweg)","Par submersion marine","Avancée dunaire","Recul du trait de côte et de falaises","Zones marécageuses","Suffosion","Glissements ou mouvements de pente","Effondrements généralisés","Risques naturels","Eruption volcanique","Cyclone/ouragan (vent)","Phénomène lié à l'atmosphère"],[true,true,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,true,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,true,false]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>hazard<\/th>\n      <th>hazard_label_fr<\/th>\n      <th>flooding<\/th>\n      <th>mudslide<\/th>\n      <th>water_table<\/th>\n      <th>torrential<\/th>\n      <th>submersion<\/th>\n      <th>hurricane<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script>
+<div class="datatables html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-1373ed8084198dd74c25" style="width:100%;height:auto;"></div>
+<script type="application/json" data-for="htmlwidget-1373ed8084198dd74c25">{"x":{"filter":"none","vertical":false,"caption":"<caption>Classification des événements pour le thème pprn<\/caption>","data":[["180","140","134","143","183","147","130","285","135","157","158","159","166","131","286","152","153","194","195","288","252","129","160","168","167"],["Par une crue à débordement lent de cours d'eau","Inondation","Mouvement de terrain","Eboulement ou chutes de pierres et de blocs","Par une crue torrentielle ou à montée rapide de cours d'eau","Glissement de terrain","Par ruissellement et coulée de boue","Par remontées de nappes naturelles","Affaissements et effondrements (cavités souterraines hors mines)","Tassements différentiels","Séisme","Avalanche","Feu de forêt","Par lave torrentielle (torrent et talweg)","Par submersion marine","Avancée dunaire","Recul du trait de côte et de falaises","Zones marécageuses","Suffosion","Glissements ou mouvements de pente","Effondrements généralisés","Risques naturels","Eruption volcanique","Cyclone/ouragan (vent)","Phénomène lié à l'atmosphère"],[true,true,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,true,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,false,false,false,false,false,true,false,false,false],[false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,false,true,false,true,false]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>hazard<\/th>\n      <th>hazard_label_fr<\/th>\n      <th>flooding<\/th>\n      <th>mudslide<\/th>\n      <th>water_table<\/th>\n      <th>torrential<\/th>\n      <th>submersion<\/th>\n      <th>hurricane<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script>
 </div>
 </div>
 <div class="section level2">
diff --git a/docs/news/index.html b/docs/news/index.html
index 2b6e0c1..7ce0c1d 100644
--- a/docs/news/index.html
+++ b/docs/news/index.html
@@ -83,6 +83,15 @@
       
     </div>
 
+    <div class="section level2">
+<h2 class="page-header" data-toc-text="0.9.36.0" id="floodamdata-09360">floodam.data 0.9.36.0<a class="anchor" aria-label="anchor" href="#floodamdata-09360"></a></h2>
+<div class="section level3">
+<h3 id="enhancements-0-9-36-0">Enhancements<a class="anchor" aria-label="anchor" href="#enhancements-0-9-36-0"></a></h3>
+<ul><li>nomenclature_clc<ul><li>nomemclature for Corine Land Cover and some color codes</li></ul></li></ul></div>
+<div class="section level3">
+<h3 id="documentation-0-9-36-0">Documentation<a class="anchor" aria-label="anchor" href="#documentation-0-9-36-0"></a></h3>
+<ul><li>_pkgdown.yml<ul><li>adaptation to pkgdown 2.0.7</li></ul></li></ul></div>
+</div>
     <div class="section level2">
 <h2 class="page-header" data-toc-text="0.9.35.0" id="floodamdata-09350">floodam.data 0.9.35.0<a class="anchor" aria-label="anchor" href="#floodamdata-09350"></a></h2>
 <div class="section level3">
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
index 6f43cec..a8db955 100644
--- a/docs/pkgdown.yml
+++ b/docs/pkgdown.yml
@@ -10,5 +10,5 @@ articles:
   download-data: download-data.html
   gaspar_fr: gaspar_fr.html
   rpg_fr: rpg_fr.html
-last_built: 2023-05-02T05:58Z
+last_built: 2023-05-02T06:25Z
 
diff --git a/docs/reference/add_journal.html b/docs/reference/add_journal.html
index 1f88be8..dd9ef19 100644
--- a/docs/reference/add_journal.html
+++ b/docs/reference/add_journal.html
@@ -191,28 +191,28 @@ formatted by <code>floodam.date:::format_journal</code>.</p>
 <span class="r-in"><span><span class="va">journal</span></span></span>
 <span class="r-in"><span><span class="op">}</span></span></span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.830803: [1] maintain gaspar with floodam.data (0.9.36.0)...</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.848778: [1] maintain gaspar with floodam.data (0.9.36.0)...</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.937106: [2] 	download_gaspar...</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.95289: [2] 	download_gaspar...</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.940669: [3] 	adapt_gaspar...</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.956625: [3] 	adapt_gaspar...</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:12.044554: [4] 	alert_gaspar...</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:35.060033: [4] 	alert_gaspar...</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.937106: [2] 	download_gaspar... Done [00:00:00:00.11]</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.95289: [2] 	download_gaspar... Done [00:00:00:00.11]</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:12.044554: [4] 	alert_gaspar... Done [00:00:00:00.11]</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:35.060033: [4] 	alert_gaspar... Done [00:00:00:00.11]</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.940669: [3] 	adapt_gaspar... Done [00:00:00:00.21]</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.956625: [3] 	adapt_gaspar... Done [00:00:00:00.21]</span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 07:58:11.830803: [1] maintain gaspar with floodam.data (0.9.36.0)... Done [00:00:00:00.33]</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> 2023-05-02 08:25:34.848778: [1] maintain gaspar with floodam.data (0.9.36.0)... Done [00:00:00:00.32]</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>                 start                 end</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 1 2023-05-02 07:58:11 2023-05-02 07:58:12</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2023-05-02 07:58:11 2023-05-02 07:58:12</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 3 2023-05-02 07:58:11 2023-05-02 07:58:12</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 4 2023-05-02 07:58:12 2023-05-02 07:58:12</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 1 2023-05-02 08:25:34 2023-05-02 08:25:35</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 2 2023-05-02 08:25:34 2023-05-02 08:25:35</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 3 2023-05-02 08:25:34 2023-05-02 08:25:35</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 4 2023-05-02 08:25:35 2023-05-02 08:25:35</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>                                           task status degree        elapsed</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 1 maintain gaspar with floodam.data (0.9.36.0)   Done      0 00:00:00:00.33</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 1 maintain gaspar with floodam.data (0.9.36.0)   Done      0 00:00:00:00.32</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> 2                              download_gaspar   Done      1 00:00:00:00.11</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> 3                                 adapt_gaspar   Done      1 00:00:00:00.21</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> 4                                 alert_gaspar   Done      1 00:00:00:00.11</span>
-- 
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