Commit 636b5a76 authored by Dumoulin Nicolas's avatar Dumoulin Nicolas
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parent 4d93e368
...@@ -60,6 +60,7 @@ class Biodiversity(Indicator): ...@@ -60,6 +60,7 @@ class Biodiversity(Indicator):
# sparse matrix initialisation # sparse matrix initialisation
self.probabilities = lil_matrix((len(patches),len(patches)), dtype='d') self.probabilities = lil_matrix((len(patches),len(patches)), dtype='d')
geom_idx=patches.columns.get_loc('geometry') geom_idx=patches.columns.get_loc('geometry')
print('Computing dispersal probabilities matrix (Biodiversity indicator) …')
for i in tqdm(range(len(patches))): for i in tqdm(range(len(patches))):
geom_i = patches.iat[i,geom_idx] geom_i = patches.iat[i,geom_idx]
for fid in list(index.intersection(geom_i.bounds)): for fid in list(index.intersection(geom_i.bounds)):
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