Commit 11679ab7 authored by Kunstler Georges's avatar Kunstler Georges
Browse files

process output new numm model with MAT MAP

parent ef28eec4
load.model <- function () {
list(name="lmer.LOGLIN.MAT.MAP.r.set.fixed.biomes.species",
var.BLUP = 'set.id',
lmer.formula.tree.id=formula("logG~1+(1|set.id)+(1|species.id)+(1|plot.id)+MAT+MAP+biomes.id+logD+sumBn+sumBn:biomes.id +(logD-1|species.id) +(sumBn-1|species.id)+(sumBn-1|set.id)"))
}
load.model <- function () {
list(name="lmer.LOGLIN.MAT.MAP.r.set.species",
var.BLUP = 'set.id',
lmer.formula.tree.id=formula("logG~1+(1|set.id)+(1|species.id)+(1|plot.id)+MAT+MAP+logD+sumBn +(logD-1|species.id) +(sumBn-1|species.id)+(sumBn-1|set.id)"))
}
......@@ -6,17 +6,17 @@ source("R/analysis/lmer.run.R")
## ## save list of all output for NA
format.all.output.lmer(file.name = "NA.koppen.results.nolog.all.rds",
list.file.name = 'list.lmer.out.all.NA.simple.ecocode.koppen.rds',
models = c(model.files.lmer.Tf.4, model.files.lmer.Tf.2),
traits = c("SLA", "Wood.density", "Max.height"))
## format.all.output.lmer(file.name = "NA.wwf.results.nolog.all.rds",
## list.file.name = 'list.lmer.out.all.NA.simple.set.rds',
## models = c(model.files.lmer.Tf.0, model.files.lmer.Tf.1,
## model.files.lmer.Tf.2, model.files.lmer.Tf.3),
## format.all.output.lmer(file.name = "NA.koppen.results.nolog.all.rds",
## list.file.name = 'list.lmer.out.all.NA.simple.ecocode.koppen.rds',
## models = c(model.files.lmer.Tf.4, model.files.lmer.Tf.2),
## traits = c("SLA", "Wood.density", "Max.height"))
format.all.output.lmer(file.name = "NA.wwf.results.nolog.all.rds",
list.file.name = 'list.lmer.out.all.NA.simple.set.rds',
models = c(model.files.lmer.Tf.0, model.files.lmer.Tf.0b,
model.files.lmer.Tf.1, model.files.lmer.Tf.3),
traits = c("SLA", "Wood.density", "Max.height"))
## format.all.output.lmer(file.name = "NA.wwf.results.nolog.all.rds",
## list.file.name = 'list.lmer.out.all.NA.intra.set.rds',
## models = c(model.files.lmer.Tf.intra.1,
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment