diff --git a/ms/Makefile b/ms/Makefile deleted file mode 100644 index 834b4a4a5c6bb429467cf5fa66922b5532f3f4c8..0000000000000000000000000000000000000000 --- a/ms/Makefile +++ /dev/null @@ -1,7 +0,0 @@ -all: - Rscript knit_site_description.R - -clean: - rm -f output/* - -.PHONY: all clean diff --git a/ms/metadata/France/files/dataIFN.FRANCE.csv b/ms/metadata/France/files/dataIFN.FRANCE.csv index d7ef02b9f2ab5e4dacaa5c8802447cf2b7e1ba68..b3c662ecf081ff4d5536a6ed502fdedbc29a1a34 100644 --- a/ms/metadata/France/files/dataIFN.FRANCE.csv +++ b/ms/metadata/France/files/dataIFN.FRANCE.csv @@ -1,36 +1,36 @@ -use,var,units,description -0,idp,, -0,a,, -0,veget,, -0,simplif,, -0,acci,, -0,espar,, -0,ori,, -0,lib,, -0,mortb,, -0,c13,, -0,ir5,, -0,htot,, -0,r,, -0,age,, -0,w,, -0,YEAR,, -0,datemort,, -0,dead,, -0,SER,, -0,sgdd,, -0,WB.y,, -0,WB.s,, -0,WS.y,, -0,WS.s,, -0,MAT,, -0,SAP,, -0,xl93,, -0,yl93,, -0,dep,, -0,csa,, -0,plisi,, -0,sfo,, -0,incid,, -0,dc,, -0,tplant,, +use var units description +1 idp NA plot number (a single census) +1 a NA tree number within the plot +1 veget NA 1 alive 2 or 3 dead +1 simplif NA indicator with tree with only dbh measurement no growth +1 acci NA 0 tree not damaged else tree damaged (1 broken 2 partil unrooten 3 bended 4 burned) +1 espar NA species code +1 ori NA origin of the tree (0 resprout 1 from seed 2 resprout from windthrown tree) +0 lib NA percentage of canopy in full light in three class (0 between 0 and 2/3 more than 2/3) +0 mortb NA percentage of branch mortality in 5 classes +1 c13 cm circumference at 1m30 +1 ir5 mm radial growth over 5 years ( !!! not diameter growth) +1 htot m height +0 r % percentage of wood of bad quality +1 age yr age +1 w 1/ha weighting fqtcor to convert qt hectqr bqsis +1 YEAR yr year of measurment +1 datemort NA died less than 5 years ago =1 more than 5 years ago =2 +1 dead NA 0 alive 1 dead +1 SER NA ecoregion (first letter large scale ecoregion number smaller division) +1 sgdd ?/day sum of degree days above 5.56?C +1 WB.y mm water budget in mm over the year +1 WB.s mm water budget in mm over the growing season +1 WS.y NA water stress index over the year +1 WS.s NA water stress index over the growing season +1 MAT ?C mean annual temperature +1 SAP mm annual sum of precipitation +1 xl93 m x in lambert 93 +1 yl93 m y in lambert 93 +0 dep NA French department (admin region) +0 csa NA type of forest 1 closed forest 2 small patch 3 open forest +1 plisi NA presence of forest edge +1 sfo NA forest structure in 5 class +0 incid NA percentage of disturbance in 5 classes only after 2009 +1 dc NA type of harvesting 0 = no harvesting orther harvesting +1 tplant NA type of plantation 0 = no plantation other plantation diff --git a/ms/metadata/France/files/species.csv b/ms/metadata/France/files/species.csv index b0bcf2c64bfe164ee3a2d738e9a7bf20107a3c71..41f2a604c4c48988e0ed01a521c74a9992fc2d86 100644 --- a/ms/metadata/France/files/species.csv +++ b/ms/metadata/France/files/species.csv @@ -1,7 +1,4 @@ -use,var,units,description -0,var,, -0,code,, -0,French_name,, -0,Latin_name,, -0,Latin_name_syn,, -0,Exotic_Native_cultivated,, +use var units description +1 code NA species code = espar in IFN file +1 Latin_name NA Latin name +0 Exotic_Native_cultivated NA exotic native