Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in / Register
Toggle navigation
Menu
Open sidebar
Kunstler Georges
traitcompet
Commits
5be64c3e
Commit
5be64c3e
authored
Sep 18, 2015
by
Kunstler Georges
Browse files
ecocode output for TP only 5
parent
53e746ca
Changes
3
Hide whitespace changes
Inline
Side-by-side
R/analysis/lmer.output-fun.R
View file @
5be64c3e
...
...
@@ -1586,7 +1586,8 @@ fun.plot.wd.sl.param <- function(list.res,
dir.root
=
'.'
,
data.type
=
'simple'
,
big.m
=
1.0
,
small.m
=
0.42
small.m
=
0.42
,
MAT.MAP.TF
=
FALSE
){
...
...
@@ -1596,7 +1597,8 @@ fun.plot.wd.sl.param <- function(list.res,
model
=
model
,
dir.root
=
dir.root
,
list.res
=
list.res
,
data.type
=
data.type
)
data.type
=
data.type
,
MAT.MAP.TF
=
MAT.MAP.TF
)
require
(
dplyr
)
# Layout
m
<-
matrix
(
c
(
1
:
4
),
2
,
2
)
...
...
scripts/analysis/lmer.all.no.log.output.R
View file @
5be64c3e
...
...
@@ -8,7 +8,7 @@ source("R/analysis/lmer.run.R")
format.all.output.lmer
(
file.name
=
"NA.koppen.results.nolog.all.rds"
,
list.file.name
=
'list.lmer.out.all.NA.simple.ecocode.koppen.rds'
,
models
=
c
(
model.files.lmer.Tf.4
,
# model.files.lmer.Tf.2),
models
=
c
(
model.files.lmer.Tf.4
)
,
# model.files.lmer.Tf.2),
traits
=
c
(
"SLA"
,
"Wood.density"
,
"Max.height"
))
## format.all.output.lmer(file.name = "NA.wwf.results.nolog.all.rds",
...
...
scripts/analysis/results.fig.R
View file @
5be64c3e
...
...
@@ -186,6 +186,12 @@ pdf('figs/figres4.pdf', width = 8, height = 7)
fun.plot.wd.sl.param
(
list.all.results.set
)
dev.off
()
pdf
(
'figs/figres4.TP.pdf'
,
width
=
8
,
height
=
7
)
fun.plot.wd.sl.param
(
list.all.results.set
,
model
=
'lmer.LOGLIN.ER.AD.Tf.MAT.MAP.r.set.species'
,
MAT.MAP.TF
=
TRUE
)
dev.off
()
pdf
(
'figs/figres4b.pdf'
,
width
=
8
,
height
=
11
)
fun.plot.all.param
(
list.all.results.set
)
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment