Commit a24f5915 authored by Georges Kunstler's avatar Georges Kunstler
Browse files

test directory issue with qsub 8

parent 4e719aaf
......@@ -9,7 +9,7 @@ pwd
for trait in "'SLA'" "'Leaf.N'" "'Wood.density'" "'Max.height'" "'Seed.mass'"; do
echo "/usr/local/R/R-3.1.1/bin/Rscript -e \"source('R/analysis/glmer.run.R'); print(getwd());print('done')\"" > Rscript_temp/gdata1$trait.sh
qsub Rscript_temp/gdata1$trait.sh -d "~/trait.competition.workshop/" -l nodes=1:ppn=1,mem=8gb -N "gdata1$trait" -q opt32G -j oe
qsub Rscript_temp/gdata1$trait.sh -d ~/trait.competition.workshop -l nodes=1:ppn=1,mem=8gb -N "gdata1$trait" -q opt32G -j oe
# # echo "/usr/local/R/R-3.0.1/bin/Rscript -e \"source('R/analysis/glmer.run.R'); load.and.save.data.for.glmer($trait, cat.TF=TRUE);print('done')\"" > Rscript_temp/gdata2$trait.sh
# # qsub Rscript_temp/gdata2$trait.sh -l nodes=1:ppn=1,mem=8gb -N "gdata2$trait" -q opt32G -j oe
......
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