diff --git a/merge.data.NSW.R b/merge.data.NSW.R index 4dc6dc0e8c6f45050c46bf8ed372dc36c90cdbfc..76b800942b2681273d243c2132687390508592b3 100644 --- a/merge.data.NSW.R +++ b/merge.data.NSW.R @@ -5,17 +5,16 @@ library(reshape) ######################### READ DATA read individuals tree data data.nswbrc <- read.csv("./data/raw/DataNSW/NSW_data_BRcontrols.csv", header = TRUE, - stringsAsFactors = FALSE, sep = "\t") + stringsAsFactors = FALSE) data.nswbrc$Date.of.measure <- as.vector(sapply(data.nswbrc$Date.of.measure, function(x) { unlist(strsplit(x, "/"))[3] })) ## Extract the years only data.nswbrt <- read.csv("./data/raw/DataNSW/NSW_data_BRtreatments.csv", header = TRUE, - stringsAsFactors = FALSE, sep = "\t") + stringsAsFactors = FALSE) data.nswbrt$Date.of.measure <- as.vector(sapply(data.nswbrt$Date.of.measure, function(x) { unlist(strsplit(x, "/"))[3] })) ## Extract the years only -data.nswbs1 <- read.csv("./data/raw/DataNSW/NSW_data_BS1.csv", header = TRUE, stringsAsFactors = FALSE, - sep = "\t") +data.nswbs1 <- read.csv("./data/raw/DataNSW/NSW_data_BS1.csv", header = TRUE, stringsAsFactors = FALSE) data.nswbs1$Date.of.measure <- as.character(format(as.Date(data.nswbs1$Date.of.measure, format = "%d-%b-%y"), format = "%d/%b/%Y")) data.nswbs1$Date.of.measure <- as.vector(sapply(data.nswbs1$Date.of.measure, function(x) { @@ -24,8 +23,7 @@ data.nswbs1$Date.of.measure <- as.vector(sapply(data.nswbs1$Date.of.measure, fun ## data.nswbs2 has a different format to the other datasets, so format to match ## the above -data.nswbs2 <- read.csv("./data/raw/DataNSW/NSW_data_BS2.csv", header = TRUE, stringsAsFactors = FALSE, - sep = "\t") +data.nswbs2 <- read.csv("./data/raw/DataNSW/NSW_data_BS2.csv", header = TRUE, stringsAsFactors = FALSE) data.nswbs2$Plot <- apply(data.nswbs2[, 1:2], 1, paste, collapse = "") data.nswbs2$Subplot <- NULL @@ -40,8 +38,7 @@ data.nswbs22[["DBH.cm..1988."]] <- data.nswbs22[["DBH.cm..2000."]] <- NULL data.nswbs2 <- data.nswbs22[, c(1:5, 8:9, 7, 6)] rm(data.nswbs22) -data.nswtnd <- read.csv("./data/raw/DataNSW/NSW_data_TND.csv", header = TRUE, stringsAsFactors = FALSE, - sep = "\t") +data.nswtnd <- read.csv("./data/raw/DataNSW/NSW_data_TND.csv", header = TRUE, stringsAsFactors = FALSE) data.nswtnd$Date.of.measure <- as.character(format(as.Date(data.nswtnd$Date.of.measure, format = "%d-%b-%y"), format = "%d/%b/%Y")) data.nswtnd$Date.of.measure <- as.vector(sapply(data.nswtnd$Date.of.measure, function(x) {