add geom to temporary file move, remove file filtering for existing files...

add geom to temporary file move, remove file filtering for existing files before running parallel processing

s1process.py

@@ -225,6 +225,7 @@ def S1CalibOrthoWithROI(infile, outfile, roi, demfld, geoid, lut='sigma', orthof
                 pipe[-1].ExecuteAndWriteOutput()
 
                 tmpfile.move(outfile)
+                tmpfile.with_suffix('.geom').move(outfile.with_suffix('.geom'))
 
             return outfile
         else:
@@ -904,14 +905,8 @@ def s1process(indir, outdir, epsg=None,
         if geoid is None:
             geoid = download_geoid(cache_dir, verbose)
 
-        print('Number of files to process: '+str(len(proc_files)))
         print('Reducing to files inside ROI...')
         proc_files = [f for f in proc_files if checkRoiInS1Acquisition(f, roi)]
-        if not overwrite:
-            print('Remove already existing files...')
-            outfiles = [ortho_dir / infile.name.replace('.tiff', '_clipped_cal' + lut + '_ortho.tiff') for infile in
-                        proc_files]
-            proc_files = [f for f, o in zip(proc_files, outfiles) if not o.exists()]
         print('Number of files to process: '+str(len(proc_files)))
         outfiles = [ortho_dir / infile.name.replace('.tiff', '_clipped_cal' + lut + '_ortho.tiff') for infile in proc_files]
         mp_args = [(infile, outfile, roi, dem_dir, geoid, lut, orthofit, overwrite, ram) for infile, outfile in
@@ -928,7 +923,7 @@ def s1process(indir, outdir, epsg=None,
                 print('Clip went wrong, file skipped: {}'.format(f))
         """
         with mp.Pool(ncores) as pool:
-            files = pool.starmap(S1CalibOrthoWithROI, mp_args)  # 1h for 8 tiles in parallel (8 threads)
+            files = pool.starmap(S1CalibOrthoWithROI, mp_args, chunksize=1)  # 1h for 8 tiles in parallel (8 threads)
         proc_files = [x for x in files if x is not None]
 
     else: