diff --git a/moringa.py b/moringa.py index 8dabe8cc2f8d5cf86752050b972bbfa3ffd51bd9..6cb6015003c6d9b0d22f6ea6f34b4721d2451456 100644 --- a/moringa.py +++ b/moringa.py @@ -21,6 +21,7 @@ def main(args): formatter_class=argparse.ArgumentDefaultsHelpFormatter) segmt.add_argument("img", type=str, help="Path to the image to segment.") segmt.add_argument("threshold", type=float, help="Threshold for the heterogeneity criterion in Baatz-Shape.") + segmt.add_argument("outimg", type=float, help="Path to the output segmentation file (.tif, .shp, .gpkg, .gml).") segmt.add_argument("--cw", type=float, nargs="?", default=0.5, help="Color weight in Baatz-Shape criterion.") segmt.add_argument("--sw", type=float, nargs="?", default=0.5, help="Spatial weight in Baatz-Shape criterion.") segmt.add_argument("--n_first_iter", type=int, nargs="?", default=12, help="Number of iterations for parallel tile processing.") @@ -30,9 +31,6 @@ def main(args): segmt.add_argument("--keep_graph", help="Keep the graph files (.bin) after segmentation.", action='store_true') segmt.add_argument("--force_parallel", help="Force the parallelization of the process even if the full graph fits in memory.", action='store_true') - - - if len(args) == 1: parser.print_help() sys.exit(0) @@ -43,8 +41,8 @@ def main(args): print('Not yet implemented.') if arg.cmd == "segment": - print(arg.force_parallel) - print('Here.') + run_segmentation(arg.img, arg.threshold, arg.cw, arg.sw, arg.outimg, arg.n_first_iter, arg.tile_margin, + arg.n_proc, arg.mem_limit, not arg.keep_graph, arg.force_parallel) return 0