import sys import argparse import VHR.segmentation import VHR.vhrbase def run_segmentation(img, threshold, cw, sw , out_seg, n_first_iter, margin, n_proc, memory, remove_graph, force_parallel): params = VHR.segmentation.LSGRMParams(threshold, cw, sw, n_first_iter, margin) VHR.segmentation.lsgrm(img,params,out_seg,n_proc,memory,None,remove_graph,force_parallel) return def preprocess_spot67(in_fld, out_fld, dem_fld, geoid_file, skip_ps): sp = VHR.vhrbase.SPOT67RasterPipeline(in_fld) sp.to_toa() sp.orthorectify(dem_fld, geoid_file) if not skip_ps: sp.write_outputs(out_fld, update_pipe=True) sp.pansharp() sp.write_outputs(out_fld) else: sp.write_outputs(out_fld) return def main(args): parser = argparse.ArgumentParser(prog="moringa", add_help=False) subpar = parser.add_subparsers(dest="cmd") prepr = subpar.add_parser("preprocess", help="Performs basic time series preprocessing (unimplemented).", formatter_class=argparse.ArgumentDefaultsHelpFormatter) # Put arguments and options here segmt = subpar.add_parser("segment", help="Performs (large scale Baatz-Shape) segmentation of an input image.", formatter_class=argparse.ArgumentDefaultsHelpFormatter) segmt.add_argument("img", type=str, help="Path to the image to segment.") segmt.add_argument("threshold", type=float, help="Threshold for the heterogeneity criterion in Baatz-Shape.") segmt.add_argument("outimg", type=str, help="Path to the output segmentation file (.tif, .shp, .gpkg, .gml).") segmt.add_argument("--cw", type=float, nargs="?", default=0.5, help="Color weight in Baatz-Shape criterion.") segmt.add_argument("--sw", type=float, nargs="?", default=0.5, help="Spatial weight in Baatz-Shape criterion.") segmt.add_argument("--n_first_iter", type=int, nargs="?", default=12, help="Number of iterations for parallel tile processing.") segmt.add_argument("--tile_margin", type=int, nargs="?", default=100, help="Margin for tile overlap.") segmt.add_argument("--n_proc", type=int, help="Number of cores to use.") segmt.add_argument("--mem_limit", type=int, help="Memory limit in MB.") segmt.add_argument("--keep_graph", help="Keep the graph files (.bin) after segmentation.", action='store_true') segmt.add_argument("--force_parallel", help="Force the spot6/7 preprocess one-liner parallelization of the process even if the full graph fits in memory.", action='store_true') vhrprep = subpar.add_parser("preprocess_spot67", help="Perform baseline pre-processing of a SPOT6/7 scene in raster sensor.", formatter_class=argparse.ArgumentDefaultsHelpFormatter) vhrprep.add_argument("fld", type=str, help="Path to the root folder containing PAN and MS subfolders.") vhrprep.add_argument("out_fld", type=str, help="Path to the output folder for preprocessed images.") vhrprep.add_argument("dem_fld", type=str, help="Path to the folder containing DEM covering the scene in WGS84 projection.") vhrprep.add_argument("geoid", type=str, help="Path to the geoid file.") vhrprep.add_argument("--skip_ps", help="Skip pansharpening step.", action='store_true') if len(args) == 1: parser.print_help() sys.exit(0) arg = parser.parse_args() if arg.cmd == "preprocess": print('Not yet implemented.') if arg.cmd == "segment": run_segmentation(arg.img, arg.threshold, arg.cw, arg.sw, arg.outimg, arg.n_first_iter, arg.tile_margin, arg.n_proc, arg.mem_limit, not arg.keep_graph, arg.force_parallel) if arg.cmd == "preprocess_spot67": preprocess_spot67(arg.fld, arg.out_fld, arg.dem_fld, arg.geoid, arg.skip_ps) return 0 if __name__ == "__main__": main(sys.argv)