diff --git a/Measurement.ipynb b/Measurement.ipynb
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+{
+ "cells": [
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "id": "86e0de15",
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 1,
+ "id": "a6aeb700",
+ "metadata": {},
+ "outputs": [
+ {
+ "data": {
+ "text/html": [
+ "<style>.container { width:50% !important; }</style>"
+ ],
+ "text/plain": [
+ "<IPython.core.display.HTML object>"
+ ]
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/html": [
+ "<style>.output_result { max-width:90% !important; }</style>"
+ ],
+ "text/plain": [
+ "<IPython.core.display.HTML object>"
+ ]
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/html": [
+ "<style>.prompt { display:none !important; }</style>"
+ ],
+ "text/plain": [
+ "<IPython.core.display.HTML object>"
+ ]
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/html": [
+ "\n",
+ " <script>\n",
+ " function code_toggle_15576857267444703097() {\n",
+ " $('div.cell.code_cell.rendered.selected').find('div.input').toggle();\n",
+ " }\n",
+ "\n",
+ " \n",
+ " </script>\n",
+ "\n",
+ " <a href=\"javascript:code_toggle_15576857267444703097()\">Toggle show/hide</a>\n",
+ " "
+ ],
+ "text/plain": [
+ "<IPython.core.display.HTML object>"
+ ]
+ },
+ "execution_count": 1,
+ "metadata": {},
+ "output_type": "execute_result"
+ }
+ ],
+ "source": [
+ "# %matplotlib nbagg\n",
+ "from IPython.display import display, HTML\n",
+ "display(HTML(\"<style>.container { width:50% !important; }</style>\"))\n",
+ "display(HTML(\"<style>.output_result { max-width:90% !important; }</style>\"))\n",
+ "display(HTML(\"<style>.prompt { display:none !important; }</style>\"))\n",
+ "\n",
+ "import random\n",
+ "\n",
+ "def hide_toggle(for_next=False):\n",
+ " this_cell = \"\"\"$('div.cell.code_cell.rendered.selected')\"\"\"\n",
+ " next_cell = this_cell + '.next()'\n",
+ "\n",
+ " toggle_text = 'Toggle show/hide' # text shown on toggle link\n",
+ " target_cell = this_cell # target cell to control with toggle\n",
+ " js_hide_current = '' # bit of JS to permanently hide code in current cell (only when toggling next cell)\n",
+ "\n",
+ " if for_next:\n",
+ " target_cell = next_cell\n",
+ " toggle_text += ' next cell'\n",
+ " js_hide_current = this_cell + '.find(\"div.input\").hide();'\n",
+ "\n",
+ " js_f_name = 'code_toggle_{}'.format(str(random.randint(1,2**64)))\n",
+ "\n",
+ " html = \"\"\"\n",
+ " <script>\n",
+ " function {f_name}() {{\n",
+ " {cell_selector}.find('div.input').toggle();\n",
+ " }}\n",
+ "\n",
+ " {js_hide_current}\n",
+ " </script>\n",
+ "\n",
+ " <a href=\"javascript:{f_name}()\">{toggle_text}</a>\n",
+ " \"\"\".format(\n",
+ " f_name=js_f_name,\n",
+ " cell_selector=target_cell,\n",
+ " js_hide_current=js_hide_current, \n",
+ " toggle_text=toggle_text\n",
+ " )\n",
+ "\n",
+ " return HTML(html)\n",
+ "\n",
+ "hide_toggle()"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 2,
+ "id": "4cd24dd9",
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "\u001b[31m ________________________________\n",
+ "| _ | | | || \\/ || ___ \\_ _|\n",
+ "| | | | |_| || . . || |_/ / | |\n",
+ "| | | | _ || |\\/| || __/ | |\n",
+ "\\ \\_/ / | | || | | || | _| |_\n",
+ " \\___/\\_| |_/\\_| |_/\\_| \\___/ \u001b[0m\n",
+ "Version: 2.1.5\n",
+ "\u001b[32m☑ Running on raspberry pi 3 model b rev 1.2\u0000 platform\u001b[0m\n",
+ "local date and time : 2023-04-26 08:20:07\n"
+ ]
+ }
+ ],
+ "source": [
+ "from ohmpi import OhmPi\n",
+ "import matplotlib.pyplot as plt"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 3,
+ "id": "ba2c6305",
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: *** NEW SESSION STARTING ***\n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: Remaining disk space : 7244.7 MB\n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: Saving data log to /home/pi/OhmPi/data/data.log\n",
+ "2023-04-26 08:20:07 UTC | 1495 | INFO: Starting_session\n",
+ "\u001b[34m\n",
+ "☑ Publishes execution as ohmpi_0001/exec topic on the localhost broker\u001b[0m\u001b[34m\n",
+ "☑ Publishes data as ohmpi_0001/data topic on the localhost broker\u001b[0m\n",
+ "\u001b[34m☑ Subscribed to control topic ohmpi_0001/ctrl on localhost broker\u001b[0m\n"
+ ]
+ },
+ {
+ "data": {
+ "text/html": [
+ "\n",
+ " <script>\n",
+ " function code_toggle_8777935057456225021() {\n",
+ " $('div.cell.code_cell.rendered.selected').find('div.input').toggle();\n",
+ " }\n",
+ "\n",
+ " \n",
+ " </script>\n",
+ "\n",
+ " <a href=\"javascript:code_toggle_8777935057456225021()\">Toggle show/hide</a>\n",
+ " "
+ ],
+ "text/plain": [
+ "<IPython.core.display.HTML object>"
+ ]
+ },
+ "execution_count": 3,
+ "metadata": {},
+ "output_type": "execute_result"
+ }
+ ],
+ "source": [
+ "from OhmPi_ML import run_measurement_new, append_and_save_new\n",
+ "\n",
+ "setattr(OhmPi,\"run_measurement\",run_measurement_new)\n",
+ "k = OhmPi(idps=False,use_mux=False)\n",
+ "\n",
+ "k.append_and_save = append_and_save_new\n",
+ "\n",
+ "hide_toggle()"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 5,
+ "id": "d226fbce",
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: *** NEW SESSION STARTING ***\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: *** NEW SESSION STARTING ***\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: *** NEW SESSION STARTING ***\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:17 UTC | 1495 | INFO: ****************************\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: \n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Remaining disk space : 7244.6 MB\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Remaining disk space : 7244.6 MB\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Remaining disk space : 7244.6 MB\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Saving data log to /home/pi/OhmPi/data/data.log\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Saving data log to /home/pi/OhmPi/data/data.log\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Saving data log to /home/pi/OhmPi/data/data.log\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Starting_session\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Starting_session\n",
+ "2023-04-26 08:21:18 UTC | 1495 | INFO: Starting_session\n",
+ "\u001b[34m\n",
+ "☑ Publishes execution as ohmpi_0001/exec topic on the localhost broker\u001b[0m\u001b[34m\n",
+ "☑ Publishes data as ohmpi_0001/data topic on the localhost broker\u001b[0m\n",
+ "\u001b[34m☑ Subscribed to control topic ohmpi_0001/ctrl on localhost broker\u001b[0m\n"
+ ]
+ },
+ {
+ "ename": "AssertionError",
+ "evalue": "",
+ "output_type": "error",
+ "traceback": [
+ "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
+ "\u001b[0;31mAssertionError\u001b[0m Traceback (most recent call last)",
+ "Cell \u001b[0;32mIn[5], line 5\u001b[0m\n\u001b[1;32m 1\u001b[0m quad \u001b[38;5;241m=\u001b[39m [[\u001b[38;5;241m1\u001b[39m,\u001b[38;5;241m4\u001b[39m,\u001b[38;5;241m2\u001b[39m,\u001b[38;5;241m3\u001b[39m],[\u001b[38;5;241m1\u001b[39m,\u001b[38;5;241m4\u001b[39m,\u001b[38;5;241m2\u001b[39m,\u001b[38;5;241m3\u001b[39m]]\n\u001b[1;32m 4\u001b[0m k \u001b[38;5;241m=\u001b[39m OhmPi(idps\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mFalse\u001b[39;00m,use_mux\u001b[38;5;241m=\u001b[39m\u001b[38;5;28;01mFalse\u001b[39;00m)\n\u001b[0;32m----> 5\u001b[0m \u001b[43mk\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43msequence\u001b[49m \u001b[38;5;241m=\u001b[39m quad\n\u001b[1;32m 6\u001b[0m k\u001b[38;5;241m.\u001b[39mreset_mux()\n\u001b[1;32m 7\u001b[0m k\u001b[38;5;241m.\u001b[39mswitch_mux_on(quad)\n",
+ "File \u001b[0;32m~/OhmPi/ohmpi.py:1688\u001b[0m, in \u001b[0;36mOhmPi.sequence\u001b[0;34m(self, sequence)\u001b[0m\n\u001b[1;32m 1686\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"Sets sequence\"\"\"\u001b[39;00m\n\u001b[1;32m 1687\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m sequence \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m:\n\u001b[0;32m-> 1688\u001b[0m \u001b[38;5;28;01massert\u001b[39;00m \u001b[38;5;28misinstance\u001b[39m(sequence, np\u001b[38;5;241m.\u001b[39mndarray)\n\u001b[1;32m 1689\u001b[0m \u001b[38;5;28mself\u001b[39m\u001b[38;5;241m.\u001b[39muse_mux \u001b[38;5;241m=\u001b[39m \u001b[38;5;28;01mTrue\u001b[39;00m\n\u001b[1;32m 1690\u001b[0m \u001b[38;5;28;01melse\u001b[39;00m:\n",
+ "\u001b[0;31mAssertionError\u001b[0m: "
+ ]
+ }
+ ],
+ "source": [
+ "quad = [1,4,2,3]\n",
+ "\n",
+ "\n",
+ "k = OhmPi(idps=False,use_mux=False)\n",
+ "k.reset_mux()\n",
+ "k.switch_mux_on(quad)\n",
+ "out = k.run_measurement(quad,tx_volt=12,injection_duration=1,strategy='constant',nb_stack=3,autogain=False,duty_cycle=0.8)\n",
+ "k.switch_mux_off(quad)\n",
+ "k.reset_mux()\n",
+ "\n",
+ "data = out['fulldata']\n",
+ "fig, (ax1,ax2) = plt.subplots(2, sharex=True)\n",
+ "ax1.plot(data[:, 2], data[:, 0], 'r.-', label='current [mA]')\n",
+ "ax1.set_ylabel('Current (mA)')\n",
+ "ax1.set_title('Current')\n",
+ "ax2.plot(data[:, 2], data[:, 1], '.-', label='Voltage [mV]',alpha=.5)\n",
+ "ax2.set_xlabel('Time (s)')\n",
+ "ax2.set_ylabel('Voltage (mV)')\n",
+ "ax2.set_title('Voltage')\n",
+ "plt.show()"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "id": "aa7433b5",
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ }
+ ],
+ "metadata": {
+ "kernelspec": {
+ "display_name": "Python 3 (ipykernel)",
+ "language": "python",
+ "name": "python3"
+ },
+ "language_info": {
+ "codemirror_mode": {
+ "name": "ipython",
+ "version": 3
+ },
+ "file_extension": ".py",
+ "mimetype": "text/x-python",
+ "name": "python",
+ "nbconvert_exporter": "python",
+ "pygments_lexer": "ipython3",
+ "version": "3.9.2"
+ }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}