From d875376a6bc8f1fc36b1679e7c1600e36b155ca0 Mon Sep 17 00:00:00 2001
From: su530201 <olivier.kaufmann@umons.ac.be>
Date: Sat, 22 Apr 2023 22:42:52 +0200
Subject: [PATCH] Changes readings append mode as multi-dim array

---
 measure.py                           | 8 +++-----
 test_measure_with_ohmpi_card_3_15.py | 2 +-
 2 files changed, 4 insertions(+), 6 deletions(-)

diff --git a/measure.py b/measure.py
index 64aa9a11..ea0b50f8 100644
--- a/measure.py
+++ b/measure.py
@@ -62,9 +62,7 @@ class OhmPiHardware:
     def _read_values(self, sampling_rate, append=False):  # noqa
         if not append:
             self._clear_values()
-            _readings = []
-        else:
-            _readings = self.readings.tolist()
+        _readings = []
         sample = 0
         self.tx_sync.wait()
         start_time = datetime.datetime.utcnow()
@@ -74,7 +72,7 @@ class OhmPiHardware:
             sample+=1
             sleep_time = start_time + datetime.timedelta(seconds = sample * sampling_rate / 1000) - lap
             time.sleep(np.min([0, np.abs(sleep_time.total_seconds())]))
-        self.readings = np.array(_readings)
+        self.readings = np.hstack([self.readings, np.array(_readings)])
 
     def _compute_tx_volt(self, best_tx_injtime=0.1, strategy='vmax', tx_volt=5,
                          vab_max=voltage_max, vmn_min=voltage_min):
@@ -157,7 +155,7 @@ class OhmPiHardware:
         self.tx.polarity = polarity
         lengths = [cycle_length/2]*2*cycles  # TODO: delete me
         print(f'vab_square_wave lengths: {lengths}')
-        self._vab_pulses(vab, lengths, sampling_rate, append)
+        self._vab_pulses(vab, lengths, sampling_rate, append=append)
 
     def _vab_pulse(self, vab, length, sampling_rate=None, polarity=None, append=False):
         """ Gets VMN and IAB from a single voltage pulse
diff --git a/test_measure_with_ohmpi_card_3_15.py b/test_measure_with_ohmpi_card_3_15.py
index 73fb9e51..966140bf 100644
--- a/test_measure_with_ohmpi_card_3_15.py
+++ b/test_measure_with_ohmpi_card_3_15.py
@@ -14,7 +14,7 @@ print(f'sampling rate: {k.rx.sampling_rate:.1f} ms, mean sample spacing: {np.mea
 
 # Test #2:
 print('\n\nTesting vab_square_wave')
-k.vab_square_wave(vab=12, length=1., sampling_rate=k.rx.sampling_rate, cycles=3)
+k.vab_square_wave(vab=12, cycle_length=2., sampling_rate=k.rx.sampling_rate, cycles=3)
 r = k.readings[:,2]/k.readings[:,1]
 print(f'Mean resistance: {np.mean(r):.3f} Ohms, Dev. {100*np.std(r)/np.mean(r):.1f} %')
 print(f'sampling rate: {k.rx.sampling_rate:.1f} ms, mean sample spacing: {np.mean(np.diff(k.readings[:,0]))*1000.:.1f} ms')
-- 
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