Resolve "Gitlab-CI: correctly handle WARNING and NOTE in checks"

Closes #86 (closed)

man/RunModel.Rd

@@ -3,7 +3,6 @@
 
 \name{RunModel}
 \alias{RunModel}
-%\alias{[.OutputsModel}
 
 
 \title{Run with the provided hydrological model function}
@@ -16,8 +15,6 @@ Function which performs a single model run with the provided function over the s
 
 \usage{
 RunModel(InputsModel, RunOptions, Param, FUN_MOD, ...)
-%
-%\method{[}{OutputsModel}(x, i)
 }
 
 
@@ -31,11 +28,6 @@ RunModel(InputsModel, RunOptions, Param, FUN_MOD, ...)
 \item{FUN_MOD}{[function] hydrological model function (e.g. \code{\link{RunModel_GR4J}}, \code{\link{RunModel_CemaNeigeGR4J}})}
 
 \item{...}{(optional) arguments to pass to \code{FUN_MOD}}
-%
-%\item{x}{[InputsModel] object of class InputsModel}
-%
-%\item{i}{[integer] of the indices to subset a time series or [character] names of the elements to extract}
-\item{...}{Further arguments to pass to the hydrological model function. See \code{\link{RunModel_Lag}} for example}
 }
 
 

.gitlab-ci.yml

@@ -6,8 +6,6 @@ stages:
 
 variables:
   R_LIBS_USER: "$CI_PROJECT_DIR/ci/lib"
-  CHECK_DIR: "$CI_PROJECT_DIR/ci/logs"
-  BUILD_LOGS_DIR: "$CI_PROJECT_DIR/ci/logs/airGR.Rcheck"
 
 default:
   before_script:
@@ -20,6 +18,8 @@ default:
   script:
     - cd ..
     - echo "setwd(\"$(pwd)\")" > .Rprofile
+    - R -e 'Sys.getenv()'
+    - R -e '.libPaths()'
     - R -e 'utils::install.packages("usethis", repo = "https://cloud.r-project.org/")'
     - R -e 'remotes::install_deps(pkgdir = "airgr", dep = T)'
     - R CMD build airgr
@@ -38,8 +38,7 @@ default:
 .check:
   stage: check
   script:
-  - R -e 'devtools::check(check_dir = Sys.getenv("CHECK_DIR"), cran = !as.logical(Sys.getenv("NOT_CRAN")), env_vars = c(NOT_CRAN = Sys.getenv("NOT_CRAN")))'
-  - R -e 'if (length(devtools::check_failures(path = Sys.getenv("BUILD_LOGS_DIR"), note = FALSE)) > 0) stop()'
+  - R -e ' rcmdcheck::rcmdcheck(args = ifelse(as.logical(Sys.getenv("NOT_CRAN")), "", "--as-cran"), error_on = "warning")'
 
 .check_not_cran:
   variables: