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  • Thibault Hallouin's avatar
    deal with both missing observations/predictions for determinist · fadb5fa9
    Thibault Hallouin authored 
    Unlike 3de89046, this also deals with
missing predictions. This effectively pairwise remove those time steps
where either observations or predictions are missing data. This does so
without creating copies of the input data, via the use of xfunctions
stored as class members.

The unit test for missing data is updated to include NAN also in the
predictions (with a varying number of NAN across the 5 time series).
    fadb5fa9
CTestCustom.cmake.in 3.68 KiB
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#
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# Copyright (C) 2005-2017 Centre National d'Etudes Spatiales (CNES)
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#
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# This file is part of Orfeo Toolbox
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#
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#     https://www.orfeo-toolbox.org/
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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#     http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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#
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# Note that the OTB/CMakeLists.txt file configures this file
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#
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#               CMake/CTestCustom.cmake.in
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#
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# to this file
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#
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#       ${OTB_BINARY_DIR}/CTestCustom.cmake
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#
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#----------------------------------------------------------------------
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#
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# For further details regarding this file,
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# see http://www.cmake.org/Wiki/CMake_Testing_With_CTest#Customizing_CTest
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#
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# and
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# http://www.kitware.com/blog/home/post/27
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#
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#----------------------------------------------------------------------
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set(CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE 1000000)
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set(CTEST_CUSTOM_MAXIMUM_NUMBER_OF_ERRORS 50)
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if(NOT DEFINED CTEST_CUSTOM_MAXIMUM_NUMBER_OF_WARNINGS)
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  set(CTEST_CUSTOM_MAXIMUM_NUMBER_OF_WARNINGS 300)
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endif()
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set(CTEST_CUSTOM_COVERAGE_EXCLUDE
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 ${CTEST_CUSTOM_COVERAGE_EXCLUDE}
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 # Exclude try_compile sources from coverage results:
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 "/CMakeFiles/CMakeTmp/"
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 # Exclude files from the Examples directories
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 #".*/Examples/.*"
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 # Exclude files from the Testing directories
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 ".*/test/.*"
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 ".*/Testing/.*"
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 # Exclude files from the ThirdParty Utilities directories
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 ".*/Modules/ThirdParty/.*"
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 ".*/Utilities/.*"
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 # Exclude SWIG wrappers files
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 ".*/Modules/Wrappers/SWIG/src/otbApplicationPYTHON_wrap.*"
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 ".*/Modules/Wrappers/SWIG/src/otbApplicationJAVA_wrap.*"
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 # Exclude Qt moc file
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 ".*moc_.*"
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 )
7172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117
set(CTEST_CUSTOM_WARNING_EXCEPTION ${CTEST_CUSTOM_WARNING_EXCEPTION} "backward_warning" "warning LNK4221" "ranlib:.*file:.*has no symbols" "ranlib: file: .+ has no symbols" "ranlib:.*warning for library:.*the table of contents is empty.*no object file members in the library define global symbols.*" "libtool:.*file:.*has no symbols" "warning -.: directory name .* does not exist" "ld.*warning.*duplicate dylib.*" "WARNING non-zero return value in ctest" ".*Microsoft.*include.*.h.*[Ww]arning.*" ".*gdal_priv.h.*[Ww]arning.*" ".*cpl_string.h.*[Ww]arning.*" ".*ogr_feature.h.*[Ww]arning.*" # Ignore clang's summary warning, assuming prior text has matched some # other warning expression: "[0-9,]+ warnings? generated." "cl...Command.line.warning.D9025" ".*include.opencv2.*warning.*" ".*include.opencv2.*note.*" ".*include.kml.*warning.*" ".*include.ogr_feature.*warning.*" ".*include.ogr_feature.*note.*" ".*itksys.SharedForward.h.*warning.*" ".*vcl_deprecated_header.h.*" ".*otbCurlHelper.cxx:.*warning.*maxConnect.*" ".*include.ITK-4.*warning.*" ".*include.curl.curl.h.*warning.*" ".*include.ossim.*warning.*" ".*include.ossim.*note.*" ".*include.ogr_core.h.*warning.*" ".*include.ogr_srs_api.h.*warning.*" ".*include.ogrsf_frmts.h.*warning.*" ".*include.ogr_geometry.h.*warning.*" ".*include.ogr_spatialref.h.*warning.*" ".*include.cpl_error.h.*warning.*" ".*vnl.vnl_numeric_traits.h.*warning.*" ".*vcl_config_compiler.h.*warning.*" ".*boost.move.unique_ptr.hpp:.*" ".*include.mpValue.h.*[Ww]arning.*\\[-Wc\\+\\+11-extensions\\]" ".*itksys.SharedForward.h.*warning.*itksys_shared_forward_to_real.*" ".*include.mpi_portable_platform.h.*warning.*invalid.suffix.on.literal.*" )