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SimAquaLife
GR3D
Commits
f9343837
Commit
f9343837
authored
Jul 01, 2020
by
Poulet Camille
Browse files
Clean in file output Round 2
parent
f3b2a63b
Changes
4
Show whitespace changes
Inline
Side-by-side
data/input/atlanticarea/fishTryRealBV_CC_Alosa.xml
View file @
f9343837
...
...
@@ -198,9 +198,9 @@
<parameterSetLine>
0
</parameterSetLine>
<yearOfTheUpdate>
0
</yearOfTheUpdate>
<basinsToUpdateFile>
data/input/reality/basinsToUpdate.csv
</basinsToUpdateFile>
<outputPath>
data/output/
</outputPath>
<outputPath>
data/output/
atlanticarea/
</outputPath>
<minYearToWrite>
1900
</minYearToWrite>
<fileNameFluxes>
nutrientFluxes
</fileNameFluxes>
<fileNameFluxes></fileNameFluxes>
<lengthAtHatching>
2.0
</lengthAtHatching>
<linfVonBertForFemale>
70.0
</linfVonBertForFemale>
<linfVonBertForMale>
70.0
</linfVonBertForMale>
...
...
@@ -297,7 +297,7 @@
<initialLength>
2.0
</initialLength>
<sigmaRecruitment>
0.2
</sigmaRecruitment>
<survivalRateAfterReproduction>
0.1
</survivalRateAfterReproduction>
<maxNumberOfSuperIndividualPerReproduction>
5
00.0
<maxNumberOfSuperIndividualPerReproduction>
1
00.0
</maxNumberOfSuperIndividualPerReproduction>
<withDiagnose>
false
</withDiagnose>
<displayFluxesOnConsole>
false
</displayFluxesOnConsole>
...
...
@@ -318,7 +318,7 @@
<processesAtEnd>
<species.WriteNutrientImportFluxes>
<synchronisationMode>
ASYNCHRONOUS
</synchronisationMode>
<fileName>
f
luxes
</fileName>
<fileName>
nutrientImportF
luxes
</fileName>
</species.WriteNutrientImportFluxes>
<species.WriteNutrientExportFluxes>
...
...
src/main/java/species/DiadromousFishGroup.java
View file @
f9343837
...
...
@@ -93,12 +93,12 @@ public class DiadromousFishGroup extends AquaNismsGroup< DiadromousFish, BasinNe
*/
private
String
basinsToUpdateFile
=
"data/input/reality/basinsToUpdate.csv"
;
private
String
outputPath
=
"data/output/"
;
private
String
outputPath
=
"data/output/
atlanticarea/
"
;
private
long
minYearToWrite
=
1900
;
//TODO:remove fileNameFluxes
private
String
fileNameFluxes
=
"fluxes"
;
private
String
fileNameFluxes
=
"
nutrientsImport
fluxes"
;
private
transient
BufferedWriter
bWForFluxes
;
private
transient
String
sep
;
...
...
@@ -458,7 +458,7 @@ public class DiadromousFishGroup extends AquaNismsGroup< DiadromousFish, BasinNe
}
// open an bufferad writer to export fluxes
if
(
fileNameFluxes
!=
null
){
if
(
!
fileNameFluxes
.
isEmpty
()
){
sep
=
";"
;
new
File
(
this
.
outputPath
+
fileNameFluxes
).
getParentFile
().
mkdirs
();
try
{
...
...
src/main/java/species/WriteNutrientExportFluxes.java
View file @
f9343837
...
...
@@ -30,7 +30,7 @@ public class WriteNutrientExportFluxes extends AquaNismsGroupProcess<DiadromousF
BufferedWriter
bW
;
String
outputPath
=
"data/output/"
;
String
outputPath
=
group
.
getOutputPath
()
;
String
sep
=
";"
;
new
File
(
outputPath
+
fileName
).
getParentFile
().
mkdirs
();
try
{
...
...
src/main/java/species/WriteNutrientImportFluxes.java
View file @
f9343837
...
...
@@ -17,7 +17,7 @@ import fr.cemagref.simaqualife.kernel.processes.AquaNismsGroupProcess;
public
class
WriteNutrientImportFluxes
extends
AquaNismsGroupProcess
<
DiadromousFish
,
DiadromousFishGroup
>
{
private
String
fileName
=
"
f
luxes"
;
private
String
fileName
=
"
nutrientImportF
luxes"
;
...
...
@@ -32,7 +32,7 @@ public class WriteNutrientImportFluxes extends AquaNismsGroupProcess<DiadromousF
BufferedWriter
bW
;
String
outputPath
=
"data/output/"
;
String
outputPath
=
group
.
getOutputPath
()
;
String
sep
=
";"
;
new
File
(
outputPath
+
fileName
).
getParentFile
().
mkdirs
();
try
{
...
...
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