conda activate prodigal-2.6.3

annotation.smk

@@ -32,8 +32,8 @@ rule prodigal:
 		ffn = "work/prodigal/{sample}/{sample}_prodigal.ffn",
 		gff = "work/prodigal/{sample}/{sample}_prodigal.gff"
 	shell:
-		# "conda activate prodigal-2.6.3 "
-		# "&& "
+		"conda activate prodigal-2.6.3 "
+		"&& "
 		"prodigal "
 		"-f gff "
 		"-i {input} "
@@ -44,8 +44,8 @@ rule prodigal:
 		"-p meta "
 		"&& "
 		"sed --in-place 's/*$//' {output.faa} "
-		# "&& "
-		# "conda deactivate "
+		"&& "
+		"conda deactivate "
 
 def faa_input(wildcards):
 	if wildcards.sample == "catalogue":