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Commit 5a131e5a authored by Delaigue Olivier's avatar Delaigue Olivier
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v1.6.3.47 style: format RunModel_CemaNeigeGR6J 

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dev 115-add-pcict-date-format-managment 118-plot-outputsmodel-remove-case-sensitivity-to-the-which-argument 136-decreased-performance-of-calibration-execution-time 60-migrate-transfoparam-functions-and-createcaliboptions-to-s3-methods 96-parallelize-the-grid-screening-step-during-calibration master CRAN_v1.7.0 CRAN_v1.6.12 CRAN_v1.6.11 CRAN_v1.6.10.4 CRAN_v1.6.9.27 CRAN_v1.6.9.24 CRAN_v1.6.9.23 CRAN_v1.6.9.21
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DESCRIPTION
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Package: airGR Package: airGR
Type: Package Type: Package
Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling
Version: 1.6.3.46 Version: 1.6.3.47
Date: 2020-11-11 Date: 2020-11-11
Authors@R: c( Authors@R: c(
person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")), person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")),
......
NEWS.md
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...@@ -4,7 +4,7 @@ ...@@ -4,7 +4,7 @@
### 1.6.3.46 Release Notes (2020-11-11) ### 1.6.3.47 Release Notes (2020-11-11)
#### New features #### New features
......
R/RunModel_CemaNeigeGR6J.R
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RunModel_CemaNeigeGR6J <- function(InputsModel,RunOptions,Param){ RunModel_CemaNeigeGR6J <- function(InputsModel, RunOptions, Param) {
## Initialization of variables
IsHyst <- inherits(RunOptions, "hysteresis") IsHyst <- inherits(RunOptions, "hysteresis")
NParam <- ifelse(test = IsHyst, yes = 10L, no = 8L) NParam <- ifelse(test = IsHyst, yes = 10L, no = 8L)
NParamCN <- NParam - 6L NParamCN <- NParam - 6L
NStates <- 4L NStates <- 4L
FortranOutputs <- .FortranOutputs(GR = "GR6J", isCN = TRUE) FortranOutputs <- .FortranOutputs(GR = "GR6J", isCN = TRUE)
##Arguments_check
if(inherits(InputsModel,"InputsModel")==FALSE){ stop("'InputsModel' must be of class 'InputsModel'") } ## Arguments_check
if(inherits(InputsModel,"daily" )==FALSE){ stop("'InputsModel' must be of class 'daily' ") } if (inherits(InputsModel, "InputsModel") == FALSE) {
if(inherits(InputsModel,"GR" )==FALSE){ stop("'InputsModel' must be of class 'GR' ") } stop("'InputsModel' must be of class 'InputsModel'")
if(inherits(InputsModel,"CemaNeige" )==FALSE){ stop("'InputsModel' must be of class 'CemaNeige' ") } }
if(inherits(RunOptions,"RunOptions" )==FALSE){ stop("'RunOptions' must be of class 'RunOptions' ") } if (inherits(InputsModel, "daily") == FALSE) {
if(inherits(RunOptions,"GR" )==FALSE){ stop("'RunOptions' must be of class 'GR' ") } stop("'InputsModel' must be of class 'daily'")
if(inherits(RunOptions,"CemaNeige" )==FALSE){ stop("'RunOptions' must be of class 'CemaNeige' ") } }
if(!is.vector(Param) | !is.numeric(Param)){ stop("'Param' must be a numeric vector") } if (inherits(InputsModel, "GR") == FALSE) {
if(sum(!is.na(Param))!=NParam){ stop(paste("'Param' must be a vector of length ",NParam," and contain no NA",sep="")) } stop("'InputsModel' must be of class 'GR'")
Param <- as.double(Param); }
if (inherits(InputsModel, "CemaNeige") == FALSE) {
Param_X1X3X6_threshold <- 1e-2 stop("'InputsModel' must be of class 'CemaNeige'")
Param_X4_threshold <- 0.5 }
if (Param[1L] < Param_X1X3X6_threshold) { if (inherits(RunOptions, "RunOptions") == FALSE) {
warning(sprintf("Param[1] (X1: production store capacity [mm]) < %.2f\n X1 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold)) stop("'RunOptions' must be of class 'RunOptions'")
Param[1L] <- Param_X1X3X6_threshold }
} if (inherits(RunOptions, "GR") == FALSE) {
if (Param[3L] < Param_X1X3X6_threshold) { stop("'RunOptions' must be of class 'GR'")
warning(sprintf("Param[3] (X3: routing store capacity [mm]) < %.2f\n X3 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold)) }
Param[3L] <- Param_X1X3X6_threshold if (inherits(RunOptions, "CemaNeige") == FALSE) {
stop("'RunOptions' must be of class 'CemaNeige'")
}
if (!is.vector(Param) | !is.numeric(Param)) {
stop("'Param' must be a numeric vector")
}
if (sum(!is.na(Param)) != NParam) {
stop(paste("'Param' must be a vector of length", NParam, "and contain no NA"))
}
Param <- as.double(Param)
Param_X1X3X6_threshold <- 1e-2
Param_X4_threshold <- 0.5
if (Param[1L] < Param_X1X3X6_threshold) {
warning(sprintf("Param[1] (X1: production store capacity [mm]) < %.2f\n X1 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold))
Param[1L] <- Param_X1X3X6_threshold
}
if (Param[3L] < Param_X1X3X6_threshold) {
warning(sprintf("Param[3] (X3: routing store capacity [mm]) < %.2f\n X3 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold))
Param[3L] <- Param_X1X3X6_threshold
}
if (Param[4L] < Param_X4_threshold) {
warning(sprintf("Param[4] (X4: unit hydrograph time constant [d]) < %.2f\n X4 set to %.2f", Param_X4_threshold, Param_X4_threshold))
Param[4L] <- Param_X4_threshold
}
if (Param[6L] < Param_X1X3X6_threshold) {
warning(sprintf("Param[6] (X6: coefficient for emptying exponential store [mm]) < %.2f\n X6 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold))
Param[6L] <- Param_X1X3X6_threshold
}
## Input_data_preparation
if (identical(RunOptions$IndPeriod_WarmUp, as.integer(0))) {
RunOptions$IndPeriod_WarmUp <- NULL
}
IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run)
LInputSeries <- as.integer(length(IndPeriod1))
IndPeriod2 <- (length(RunOptions$IndPeriod_WarmUp) + 1):LInputSeries
ParamCemaNeige <- Param[(length(Param) - 1 - 2 * as.integer(IsHyst)):length(Param)]
NParamMod <- as.integer(length(Param) - (2 + 2 * as.integer(IsHyst)))
ParamMod <- Param[1:NParamMod]
NLayers <- length(InputsModel$LayerPrecip)
NStatesMod <- as.integer(length(RunOptions$IniStates) - NStates * NLayers)
ExportDatesR <- "DatesR" %in% RunOptions$Outputs_Sim
ExportStateEnd <- "StateEnd" %in% RunOptions$Outputs_Sim
## SNOW_MODULE________________________________________________________________________________
if (inherits(RunOptions, "CemaNeige") == TRUE) {
if ("all" %in% RunOptions$Outputs_Sim) {
IndOutputsCemaNeige <- as.integer(1:length(FortranOutputs$CN))
} else {
IndOutputsCemaNeige <- which(FortranOutputs$CN %in% RunOptions$Outputs_Sim)
}
CemaNeigeLayers <- list()
CemaNeigeStateEnd <- NULL
NameCemaNeigeLayers <- "CemaNeigeLayers"
## Call_DLL_CemaNeige_________________________
for(iLayer in 1:NLayers) {
if (!IsHyst) {
StateStartCemaNeige <- RunOptions$IniStates[(7 + 20 + 40) + c(iLayer, iLayer+NLayers)]
} else {
StateStartCemaNeige <- RunOptions$IniStates[(7 + 20 + 40) + c(iLayer, iLayer+NLayers, iLayer+2*NLayers, iLayer+3*NLayers)]
} }
if (Param[4L] < Param_X4_threshold) { RESULTS <- .Fortran("frun_cemaneige", PACKAGE = "airGR",
warning(sprintf("Param[4] (X4: unit hydrograph time constant [d]) < %.2f\n X4 set to %.2f", Param_X4_threshold, Param_X4_threshold)) ## inputs
Param[4L] <- Param_X4_threshold LInputs = LInputSeries, ### length of input and output series
} InputsPrecip = InputsModel$LayerPrecip[[iLayer]][IndPeriod1], ### input series of total precipitation [mm/d]
if (Param[6L] < Param_X1X3X6_threshold) { InputsFracSolidPrecip = InputsModel$LayerFracSolidPrecip[[iLayer]][IndPeriod1], ### input series of fraction of solid precipitation [0-1]
warning(sprintf("Param[6] (X6: coefficient for emptying exponential store [mm]) < %.2f\n X6 set to %.2f", Param_X1X3X6_threshold, Param_X1X3X6_threshold)) InputsTemp = InputsModel$LayerTemp[[iLayer]][IndPeriod1], ### input series of air mean temperature [degC]
Param[6L] <- Param_X1X3X6_threshold MeanAnSolidPrecip = RunOptions$MeanAnSolidPrecip[iLayer], ### value of annual mean solid precip [mm/y]
} NParam = as.integer(NParamCN), ### number of model parameters = 2 or 4
Param = as.double(ParamCemaNeige), ### parameter set
##Input_data_preparation NStates = as.integer(NStates), ### number of state variables used for model initialising = 4
if(identical(RunOptions$IndPeriod_WarmUp,as.integer(0))){ RunOptions$IndPeriod_WarmUp <- NULL; } StateStart = StateStartCemaNeige, ### state variables used when the model run starts
IndPeriod1 <- c(RunOptions$IndPeriod_WarmUp,RunOptions$IndPeriod_Run); IsHyst = as.integer(IsHyst), ### use of hysteresis
LInputSeries <- as.integer(length(IndPeriod1)) NOutputs = as.integer(length(IndOutputsCemaNeige)), ### number of output series
IndPeriod2 <- (length(RunOptions$IndPeriod_WarmUp)+1):LInputSeries; IndOutputs = IndOutputsCemaNeige, ### indices of output series
ParamCemaNeige <- Param[(length(Param)-1-2*as.integer(IsHyst)):length(Param)]; ## outputs
NParamMod <- as.integer(length(Param)-(2+2*as.integer(IsHyst))); Outputs = matrix(as.double(-999.999), nrow = LInputSeries,ncol = length(IndOutputsCemaNeige)), ### output series [mm]
ParamMod <- Param[1:NParamMod]; StateEnd = rep(as.double(-999.999), as.integer(NStates)) ### state variables at the end of the model run
NLayers <- length(InputsModel$LayerPrecip); )
NStatesMod <- as.integer(length(RunOptions$IniStates)-NStates*NLayers); RESULTS$Outputs[ round(RESULTS$Outputs , 3) == -999.999] <- NA
ExportDatesR <- "DatesR" %in% RunOptions$Outputs_Sim; RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == -999.999] <- NA
ExportStateEnd <- "StateEnd" %in% RunOptions$Outputs_Sim;
##SNOW_MODULE________________________________________________________________________________##
if(inherits(RunOptions,"CemaNeige")==TRUE){
if("all" %in% RunOptions$Outputs_Sim){ IndOutputsCemaNeige <- as.integer(1:length(FortranOutputs$CN));
} else { IndOutputsCemaNeige <- which(FortranOutputs$CN %in% RunOptions$Outputs_Sim); }
CemaNeigeLayers <- list(); CemaNeigeStateEnd <- NULL; NameCemaNeigeLayers <- "CemaNeigeLayers";
##Call_DLL_CemaNeige_________________________ ## Data_storage
for(iLayer in 1:NLayers){ CemaNeigeLayers[[iLayer]] <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i])
if (!IsHyst) { names(CemaNeigeLayers[[iLayer]]) <- FortranOutputs$CN[IndOutputsCemaNeige]
StateStartCemaNeige <- RunOptions$IniStates[(7 + 20 + 40) + c(iLayer, iLayer+NLayers)] IndPliqAndMelt <- which(names(CemaNeigeLayers[[iLayer]]) == "PliqAndMelt")
} else { if (iLayer == 1) {
StateStartCemaNeige <- RunOptions$IniStates[(7 + 20 + 40) + c(iLayer, iLayer+NLayers, iLayer+2*NLayers, iLayer+3*NLayers)] CatchMeltAndPliq <- RESULTS$Outputs[, IndPliqAndMelt] / NLayers
}
RESULTS <- .Fortran("frun_cemaneige",PACKAGE="airGR",
##inputs
LInputs=LInputSeries, ### length of input and output series
InputsPrecip=InputsModel$LayerPrecip[[iLayer]][IndPeriod1], ### input series of total precipitation [mm/d]
InputsFracSolidPrecip=InputsModel$LayerFracSolidPrecip[[iLayer]][IndPeriod1], ### input series of fraction of solid precipitation [0-1]
InputsTemp=InputsModel$LayerTemp[[iLayer]][IndPeriod1], ### input series of air mean temperature [degC]
MeanAnSolidPrecip=RunOptions$MeanAnSolidPrecip[iLayer], ### value of annual mean solid precip [mm/y]
NParam=as.integer(NParamCN), ### number of model parameters = 2 or 4
Param=as.double(ParamCemaNeige), ### parameter set
NStates=as.integer(NStates), ### number of state variables used for model initialising = 4
StateStart=StateStartCemaNeige, ### state variables used when the model run starts
IsHyst = as.integer(IsHyst), ### use of hysteresis
NOutputs=as.integer(length(IndOutputsCemaNeige)), ### number of output series
IndOutputs=IndOutputsCemaNeige, ### indices of output series
##outputs
Outputs=matrix(as.double(-999.999),nrow=LInputSeries,ncol=length(IndOutputsCemaNeige)), ### output series [mm]
StateEnd=rep(as.double(-999.999),as.integer(NStates)) ### state variables at the end of the model run
)
RESULTS$Outputs[ round(RESULTS$Outputs ,3)==(-999.999)] <- NA;
RESULTS$StateEnd[round(RESULTS$StateEnd,3)==(-999.999)] <- NA;
##Data_storage
CemaNeigeLayers[[iLayer]] <- lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]);
names(CemaNeigeLayers[[iLayer]]) <- FortranOutputs$CN[IndOutputsCemaNeige];
IndPliqAndMelt <- which(names(CemaNeigeLayers[[iLayer]]) == "PliqAndMelt");
if(iLayer==1){ CatchMeltAndPliq <- RESULTS$Outputs[,IndPliqAndMelt]/NLayers; }
if(iLayer >1){ CatchMeltAndPliq <- CatchMeltAndPliq + RESULTS$Outputs[,IndPliqAndMelt]/NLayers; }
if(ExportStateEnd){ CemaNeigeStateEnd <- c(CemaNeigeStateEnd,RESULTS$StateEnd); }
rm(RESULTS);
} ###ENDFOR_iLayer
names(CemaNeigeLayers) <- sprintf("Layer%02i", seq_len(NLayers))
} ###ENDIF_RunSnowModule
if(inherits(RunOptions,"CemaNeige")==FALSE){
CemaNeigeLayers <- list(); CemaNeigeStateEnd <- NULL; NameCemaNeigeLayers <- NULL;
CatchMeltAndPliq <- InputsModel$Precip[IndPeriod1]; }
##MODEL______________________________________________________________________________________##
if("all" %in% RunOptions$Outputs_Sim){ IndOutputsMod <- as.integer(1:length(FortranOutputs$GR));
} else { IndOutputsMod <- which(FortranOutputs$GR %in% RunOptions$Outputs_Sim); }
##Use_of_IniResLevels
if(!is.null(RunOptions$IniResLevels)){
RunOptions$IniStates[1] <- RunOptions$IniResLevels[1] * ParamMod[1] ### production store level (mm)
RunOptions$IniStates[2] <- RunOptions$IniResLevels[2] * ParamMod[3] ### routing store level (mm)
RunOptions$IniStates[3] <- RunOptions$IniResLevels[3] ### exponential store level (mm)
} }
if (iLayer >1 ) {
##Call_fortan CatchMeltAndPliq <- CatchMeltAndPliq + RESULTS$Outputs[, IndPliqAndMelt] / NLayers
RESULTS <- .Fortran("frun_gr6j",PACKAGE="airGR",
##inputs
LInputs=LInputSeries, ### length of input and output series
InputsPrecip=CatchMeltAndPliq, ### input series of total precipitation [mm/d]
InputsPE=InputsModel$PotEvap[IndPeriod1], ### input series potential evapotranspiration [mm/d]
NParam=NParamMod, ### number of model parameter
Param=ParamMod, ### parameter set
NStates=NStatesMod, ### number of state variables used for model initialising
StateStart=RunOptions$IniStates[1:NStatesMod], ### state variables used when the model run starts
NOutputs=as.integer(length(IndOutputsMod)), ### number of output series
IndOutputs=IndOutputsMod, ### indices of output series
##outputs
Outputs=matrix(as.double(-999.999),nrow=LInputSeries,ncol=length(IndOutputsMod)), ### output series [mm]
StateEnd=rep(as.double(-999.999),NStatesMod) ### state variables at the end of the model run
)
RESULTS$Outputs[ round(RESULTS$Outputs ,3)==(-999.999)] <- NA;
RESULTS$StateEnd[round(RESULTS$StateEnd,3)==(-999.999)] <- NA;
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ### remove negative values except for the ExpStore location
idNStates <- seq_len(NStates*NLayers) %% NStates
RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_CemaNeigeGR6J, InputsModel = InputsModel, IsHyst = IsHyst,
ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = RESULTS$StateEnd[3L],
UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
GCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 1]],
eTGCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 2]],
GthrCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 3]],
GlocmaxCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 0]],
verbose = FALSE)
} }
if (ExportStateEnd) {
if(inherits(RunOptions,"CemaNeige")==TRUE & "Precip" %in% RunOptions$Outputs_Sim){ RESULTS$Outputs[,which(FortranOutputs$GR[IndOutputsMod]=="Precip")] <- InputsModel$Precip[IndPeriod1]; } CemaNeigeStateEnd <- c(CemaNeigeStateEnd,RESULTS$StateEnd)
##Output_data_preparation
##OutputsModel_only
if(ExportDatesR==FALSE & ExportStateEnd==FALSE){
OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
list(CemaNeigeLayers) );
names(OutputsModel) <- c(FortranOutputs$GR[IndOutputsMod],NameCemaNeigeLayers); }
##DatesR_and_OutputsModel_only
if(ExportDatesR==TRUE & ExportStateEnd==FALSE){
OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
list(CemaNeigeLayers) );
names(OutputsModel) <- c("DatesR",FortranOutputs$GR[IndOutputsMod],NameCemaNeigeLayers); }
##OutputsModel_and_SateEnd_only
if(ExportDatesR==FALSE & ExportStateEnd==TRUE){
OutputsModel <- c( lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
list(CemaNeigeLayers),
list(RESULTS$StateEnd) );
names(OutputsModel) <- c(FortranOutputs$GR[IndOutputsMod],NameCemaNeigeLayers,"StateEnd"); }
##DatesR_and_OutputsModel_and_SateEnd
if(ExportDatesR==TRUE & ExportStateEnd==TRUE){
OutputsModel <- c( list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2,i]),
list(CemaNeigeLayers),
list(RESULTS$StateEnd) );
names(OutputsModel) <- c("DatesR",FortranOutputs$GR[IndOutputsMod],NameCemaNeigeLayers,"StateEnd"); }
##End
rm(RESULTS);
class(OutputsModel) <- c("OutputsModel","daily","GR","CemaNeige");
if(IsHyst) {
class(OutputsModel) <- c(class(OutputsModel), "hysteresis")
} }
return(OutputsModel); rm(RESULTS)
} ### ENDFOR_iLayer
names(CemaNeigeLayers) <- sprintf("Layer%02i", seq_len(NLayers))
} ### ENDIF_RunSnowModule
if (inherits(RunOptions, "CemaNeige") == FALSE) {
CemaNeigeLayers <- list()
CemaNeigeStateEnd <- NULL
NameCemaNeigeLayers <- NULL
CatchMeltAndPliq <- InputsModel$Precip[IndPeriod1]
}
## MODEL______________________________________________________________________________________
if ("all" %in% RunOptions$Outputs_Sim) {
IndOutputsMod <- as.integer(1:length(FortranOutputs$GR))
} else {
IndOutputsMod <- which(FortranOutputs$GR %in% RunOptions$Outputs_Sim)
}
## Use_of_IniResLevels
if (!is.null(RunOptions$IniResLevels)) {
RunOptions$IniStates[1] <- RunOptions$IniResLevels[1] * ParamMod[1] ### production store level (mm)
RunOptions$IniStates[2] <- RunOptions$IniResLevels[2] * ParamMod[3] ### routing store level (mm)
RunOptions$IniStates[3] <- RunOptions$IniResLevels[3] ### exponential store level (mm)
}
## Call_fortan
RESULTS <- .Fortran("frun_gr6j", PACKAGE = "airGR",
## inputs
LInputs = LInputSeries, ### length of input and output series
InputsPrecip = CatchMeltAndPliq, ### input series of total precipitation [mm/d]
InputsPE = InputsModel$PotEvap[IndPeriod1], ### input series potential evapotranspiration [mm/d]
NParam = NParamMod, ### number of model parameter
Param = ParamMod, ### parameter set
NStates = NStatesMod, ### number of state variables used for model initialising
StateStart = RunOptions$IniStates[1:NStatesMod], ### state variables used when the model run starts
NOutputs = as.integer(length(IndOutputsMod)), ### number of output series
IndOutputs = IndOutputsMod, ### indices of output series
## outputs
Outputs = matrix(as.double(-999.999), nrow = LInputSeries,ncol = length(IndOutputsMod)), ### output series [mm]
StateEnd = rep(as.double(-999.999), NStatesMod) ### state variables at the end of the model run
)
RESULTS$Outputs[ round(RESULTS$Outputs , 3) == -999.999] <- NA
RESULTS$StateEnd[round(RESULTS$StateEnd, 3) == -999.999] <- NA
if (ExportStateEnd) {
RESULTS$StateEnd[-3L] <- ifelse(RESULTS$StateEnd[-3L] < 0, 0, RESULTS$StateEnd[-3L]) ## remove negative values except for the ExpStore location
idNStates <- seq_len(NStates*NLayers) %% NStates
RESULTS$StateEnd <- CreateIniStates(FUN_MOD = RunModel_CemaNeigeGR6J, InputsModel = InputsModel, IsHyst = IsHyst,
ProdStore = RESULTS$StateEnd[1L], RoutStore = RESULTS$StateEnd[2L], ExpStore = RESULTS$StateEnd[3L],
UH1 = RESULTS$StateEnd[(1:20)+7], UH2 = RESULTS$StateEnd[(1:40)+(7+20)],
GCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 1]],
eTGCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 2]],
GthrCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 3]],
GlocmaxCemaNeigeLayers = CemaNeigeStateEnd[seq_len(NStates*NLayers)[idNStates == 0]],
verbose = FALSE)
}
if (inherits(RunOptions, "CemaNeige") == TRUE & "Precip" %in% RunOptions$Outputs_Sim) {
RESULTS$Outputs[,which(FortranOutputs$GR[IndOutputsMod] == "Precip")] <- InputsModel$Precip[IndPeriod1]
}
## Output_data_preparation
## OutputsModel_only
if (ExportDatesR == FALSE & ExportStateEnd == FALSE) {
OutputsModel <- c(lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(CemaNeigeLayers))
names(OutputsModel) <- c(FortranOutputs$GR[IndOutputsMod], NameCemaNeigeLayers)
}
## DatesR_and_OutputsModel_only
if (ExportDatesR == TRUE & ExportStateEnd == FALSE) {
OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(CemaNeigeLayers))
names(OutputsModel) <- c("DatesR", FortranOutputs$GR[IndOutputsMod], NameCemaNeigeLayers)
}
## OutputsModel_and_SateEnd_only
if (ExportDatesR == FALSE & ExportStateEnd == TRUE) {
OutputsModel <- c(lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(CemaNeigeLayers),
list(RESULTS$StateEnd))
names(OutputsModel) <- c(FortranOutputs$GR[IndOutputsMod], NameCemaNeigeLayers, "StateEnd")
}
## DatesR_and_OutputsModel_and_SateEnd
if (ExportDatesR == TRUE & ExportStateEnd == TRUE) {
OutputsModel <- c(list(InputsModel$DatesR[RunOptions$IndPeriod_Run]),
lapply(seq_len(RESULTS$NOutputs), function(i) RESULTS$Outputs[IndPeriod2, i]),
list(CemaNeigeLayers),
list(RESULTS$StateEnd))
names(OutputsModel) <- c("DatesR", FortranOutputs$GR[IndOutputsMod], NameCemaNeigeLayers, "StateEnd")
}
## End
rm(RESULTS)
class(OutputsModel) <- c("OutputsModel", "daily", "GR", "CemaNeige")
if (IsHyst) {
class(OutputsModel) <- c(class(OutputsModel), "hysteresis")
}
return(OutputsModel)
} }
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