test readme

d8f8e098 · Harmel Tristan · 60dccb18 · 60dccb18 · 60dccb18 · 60dccb18
Commit d8f8e098 authored 5 years ago by Harmel Tristan
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--- a/.idea/.gitignore
+++ b/.idea/.gitignore
-# Default ignored files
-/workspace.xml
\ No newline at end of file
--- a/.idea/encodings.xml
+++ b/.idea/encodings.xml
-<?xml version="1.0" encoding="UTF-8"?>
-<project version="4">
-  <component name="Encoding" addBOMForNewFiles="with NO BOM" />
-</project>
\ No newline at end of file
--- a/.idea/libraries/R_User_Library.xml
+++ b/.idea/libraries/R_User_Library.xml
-<component name="libraryTable">
-  <library name="R User Library">
-    <CLASSES />
-    <SOURCES />
-  </library>
-</component>
\ No newline at end of file
--- a/.idea/misc.xml
+++ b/.idea/misc.xml
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-  </component>
-</project>
\ No newline at end of file
--- a/.idea/modules.xml
+++ b/.idea/modules.xml
-<?xml version="1.0" encoding="UTF-8"?>
-<project version="4">
-  <component name="ProjectModuleManager">
-    <modules>
-      <module fileurl="file://$PROJECT_DIR$/.idea/visu_trios.iml" filepath="$PROJECT_DIR$/.idea/visu_trios.iml" />
-    </modules>
-  </component>
-</project>
\ No newline at end of file
--- a/.idea/vcs.xml
+++ b/.idea/vcs.xml
-<?xml version="1.0" encoding="UTF-8"?>
-<project version="4">
-  <component name="VcsDirectoryMappings">
-    <mapping directory="$PROJECT_DIR$" vcs="Git" />
-  </component>
-</project>
\ No newline at end of file
--- a/.idea/visu_trios.iml
+++ b/.idea/visu_trios.iml
-<?xml version="1.0" encoding="UTF-8"?>
-<module type="PYTHON_MODULE" version="4">
-  <component name="NewModuleRootManager">
-    <content url="file://$MODULE_DIR$" />
-    <orderEntry type="jdk" jdkName="Python 3.5" jdkType="Python SDK" />
-    <orderEntry type="sourceFolder" forTests="false" />
-    <orderEntry type="library" name="R User Library" level="project" />
-    <orderEntry type="library" name="R Skeletons" level="application" />
-  </component>
-  <component name="TestRunnerService">
-    <option name="projectConfiguration" value="pytest" />
-    <option name="PROJECT_TEST_RUNNER" value="py.test" />
-  </component>
-</module>
\ No newline at end of file
--- a/.idea/workspace (front-usr-580's conflicted copy 2018-06-22).xml
+++ b/.idea/workspace (front-usr-580's conflicted copy 2018-06-22).xml
-<?xml version="1.0" encoding="UTF-8"?>
-<project version="4">
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-    <option name="EXCLUDED_CONVERTED_TO_IGNORED" value="true" />
-    <option name="TRACKING_ENABLED" value="true" />
-    <option name="SHOW_DIALOG" value="false" />
-    <option name="HIGHLIGHT_CONFLICTS" value="true" />
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-  </component>
-  <component name="FileEditorManager">
-    <leaf SIDE_TABS_SIZE_LIMIT_KEY="300">
-      <file leaf-file-name="main.py" pinned="false" current-in-tab="true">
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-              <item name="visu_trios" type="462c0819:PsiDirectoryNode" />
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-          <select />
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-  <component name="RunDashboard">
-    <option name="ruleStates">
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-        <RuleState>
-          <option name="name" value="ConfigurationTypeDashboardGroupingRule" />
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-  </component>
-  <component name="SvnConfiguration">
-    <configuration />
-  </component>
-  <component name="TaskManager">
-    <task active="true" id="Default" summary="Default task">
-      <changelist id="398d7fe2-9975-4e89-b434-afd3390338ad" name="Default" comment="" />
-      <created>1528796929388</created>
-      <option name="number" value="Default" />
-      <option name="presentableId" value="Default" />
-      <updated>1528796929388</updated>
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-    <servers />
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-  <component name="ToolWindowManager">
-    <frame x="0" y="25" width="1920" height="1055" extended-state="7" />
-    <editor active="true" />
-    <layout>
-      <window_info content_ui="combo" id="Project" order="0" visible="true" weight="0.24986821" />
-      <window_info anchor="bottom" id="TODO" order="6" />
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-  <component name="editorHistoryManager">
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-    </entry>
-  </component>
-</project>
\ No newline at end of file
--- a/Untitled.ipynb
+++ b/Untitled.ipynb
-{
- "cells": [
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "Trios in situ\n"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 1,
-   "metadata": {},
-   "outputs": [
-    {
-     "ename": "NameError",
-     "evalue": "name 'plot' is not defined",
-     "traceback": [
-      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
-      "\u001b[0;31mNameError\u001b[0m                                 Traceback (most recent call last)",
-      "\u001b[0;32m<ipython-input-1-35d2aae85c22>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mplot\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m0\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;36m0\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
-      "\u001b[0;31mNameError\u001b[0m: name 'plot' is not defined"
-     ],
-     "output_type": "error"
-    }
-   ],
-   "source": [
-    "import trios\n",
-    "print(trios.__version__)\n"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  }
- ],
- "metadata": {
-  "kernelspec": {
-   "display_name": "Python 2",
-   "language": "python",
-   "name": "python2"
-  },
-  "language_info": {
-   "codemirror_mode": {
-    "name": "ipython",
-    "version": 2
-   },
-   "file_extension": ".py",
-   "mimetype": "text/x-python",
-   "name": "python",
-   "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.15rc1"
-  }
- },
- "nbformat": 4,
- "nbformat_minor": 2
-}
-%% Cell type:markdown id: tags:
-
-Trios in situ
-
-%% Cell type:code id: tags:
-
-``` python
-import trios
-print(trios.__version__)
-```
-
-%% Output
-
-    ---------------------------------------------------------------------------
-    NameError                                 Traceback (most recent call last)
-    <ipython-input-1-35d2aae85c22> in <module>()
-    ----> 1 plot(0,0)
-
-    NameError: name 'plot' is not defined
-
-%% Cell type:code id: tags:
-
-``` python
-```
--- a/__init__.py
+++ b/__init__.py
--- a/temp-plot.html
+++ b/temp-plot.html
--- a/test.csv
+++ b/test.csv
-param,RT$station[n],RT$station_area[n],LAT,LON,heading,WIND_DIRECTION,WIND_SPEED,AIR_TEMP,AIR_HUMIDITY,AIR_PRES,Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),Rrs(awr),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-time,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
-2017-05-04 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--- a/test_setup_Rrs.pdf
+++ b/test_setup_Rrs.pdf
--- a/trios.egg-info/PKG-INFO
+++ b/trios.egg-info/PKG-INFO
-Metadata-Version: 1.0
-Name: trios
-Version: 1.0.0
-Summary: Package to help trios TriOS radiometer data for various above-water or in-water setups
-Home-page: https://gitlab.irstea.fr/telquel-obs2co/insitu/trios
-Author: T. Harmel
-Author-email: tristan.harmel@gmail.com
-License: MIT
-Description: UNKNOWN
-Platform: UNKNOWN
--- a/trios.egg-info/SOURCES.txt
+++ b/trios.egg-info/SOURCES.txt
-MANIFEST.in
-README.md
-setup.py
-aux/Thuillier_2003_0.3nm.dat
-aux/__init__.py
-aux/mobley2datasheet.sh
-aux/rhoTable_Mobley1999.csv
-aux/rhoTable_Mobley1999.txt
-aux/rhoTable_Mobley2015.csv
-aux/rhoTable_Mobley2015.txt
-aux/sensors_spec.py
-aux/surface_reflectance_factor_rho_coarse_aerosol_rg0.60_sig0.60.csv
-aux/surface_reflectance_factor_rho_fine_aerosol_rg0.06_sig0.46.csv
-aux/water_coef.txt
-exe/__init__.py
-exe/db_martinez.py
-exe/db_petit-saut.py
-simulation/__init__.py
-simulation/rho_snapshot.py
-trios/__init__.py
-trios/config.py
-trios/main.py
-trios/process.py
-trios/process_compar_awr.py
-trios/process_sabine.py
-trios/process_test_setup.py
-trios/run_awr.py
-trios/run_iwr.py
-trios/run_swr.py
-trios.egg-info/PKG-INFO
-trios.egg-info/SOURCES.txt
-trios.egg-info/dependency_links.txt
-trios.egg-info/entry_points.txt
-trios.egg-info/requires.txt
-trios.egg-info/top_level.txt
-trios/utils/DBtrios.py
-trios/utils/DButils.py
-trios/utils/__init__.py
-trios/utils/auxdata.py
-trios/utils/format_info4acix.py
-trios/utils/sunposition.py
-trios/utils/utils.py
-visu/__init__.py
-visu/data_visu.py
-visu/visu.py
\ No newline at end of file
--- a/trios.egg-info/dependency_links.txt
+++ b/trios.egg-info/dependency_links.txt
-
--- a/trios.egg-info/entry_points.txt
+++ b/trios.egg-info/entry_points.txt
-[console_scripts]
-trios_processing = trios.main:main
-visu_trios = visu.data_visu:main
-
--- a/trios.egg-info/requires.txt
+++ b/trios.egg-info/requires.txt
-dash
-dash_core_components
-dash_html_components
-pandas
-scipy
-numpy
-pyodbc
-netCDF4
-matplotlib
-docopt
-GDAL
-python-dateutil
--- a/trios.egg-info/top_level.txt
+++ b/trios.egg-info/top_level.txt
-aux
-exe
-simulation
-trios
-visu