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Created with Raphaël 2.2.012Sep1037Aug27Jul26241526Jun23201913125228May262421142130Apr232216931Mar211915141326Feb21201975323Jan2217920Dec1918171119Nov18151412118654329Oct28252422212019181716151413127432126Sep2524201918191817161716151312111096543229Aug2827262524232019181716151312109854229Jul2726changed location of bash files for run on clusterclean to git on clusterfixed problem in initial valuefixe bugs in new subsampling per plotchanged to subsampling per plot close #99solve problem in weight for subsampling and add init for stancorrect error in initfuther test on stan and jags with different priorfurther progress on improving jagsprogress on JAGS simplest modelprogress on optimiz stan and jagsprogress on optimizing JAGS and STANinclude fixed effect biomes code ready to be sent for jags and comparison between stan and jagssolve issue in data resampling and stan mergeing of chainsfixe issue of traits standarizationfix problem in removing outlier in data.table closes #89 #86 #87first version of quick report in knitrFix metadata so that compiles. #89.progress on quick report for skype meetingupdate metadata fix #82 and fix climate issue in Canada fix #85progress on talk in beamerfirst version of departemental talkprogress on slidessummarise dat now working with a simple testprogress on slideknitr workingfixed knitrsome progress on truning in a package but not finishpackagepackageExport climate functions, utility function for finding rootFirst version of packagelast commit before turning into a packageprogress on stan with random species f nreformat codenew makefileprogress on cat modelsnew way of loading data to avoid memory issuestart explore results with MAT and CATrun with catre run with A_EV A_D but error in TEST CWMnew report