debug BOC

d5b83bde · Fize Jacques · 9e1a1db7 · d5b83bde
Commit d5b83bde authored 6 years ago by Fize Jacques
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with 2 additions and 2 deletions
+2 -2
--- a/gmatch4py/bag_of_cliques.pyx
+++ b/gmatch4py/bag_of_cliques.pyx
@@ -118,7 +118,7 @@ cdef class BagOfCliques(Base):
        cdef list clique_vocab=self.getUniqueCliques(graphs)
        cdef dict map_str_cliques=self.transform_clique_vocab(clique_vocab)
        cdef int l_v=len(clique_vocab)
-        boc = lil_matrix((len(graphs), l_v))
+        boc = np.zeros((len(graphs), l_v))
        cdef np.ndarray vector
        cdef list cliques
        cdef str hash
@@ -127,7 +127,7 @@ cdef class BagOfCliques(Base):
            #sys.stdout.write("\r{0}/{1}".format(g,len(graphs)))
            gr = graphs[g]
            vector = np.zeros(l_v)
-            cliques = list(nx.enumerate_all_cliques(nx.Graph(gr)))
+            cliques = list(nx.find_cliques(nx.Graph(gr)))
            for clique in cliques:
                hash=self.clique2str(clique)
                if hash in map_str_cliques: