An error occurred while loading the file. Please try again.
-
Mohammed Musaab authoredd9d0da06
function varargout = CellTrackerSettingsTracking(varargin)% CELLTRACKERSETTINGSTRACKING M-file for CellTrackerSettingsTracking.fig% CELLTRACKERSETTINGSTRACKING, by itself, creates a new CELLTRACKERSETTINGSTRACKING or raises the existing% singleton*.%% H = CELLTRACKERSETTINGSTRACKING returns the handle to a new CELLTRACKERSETTINGSTRACKING or the handle to% the existing singleton*.%% CELLTRACKERSETTINGSTRACKING('CALLBACK',hObject,eventData,handles,...) calls the local% function named CALLBACK in CELLTRACKERSETTINGSTRACKING.M with the given input arguments.%% CELLTRACKERSETTINGSTRACKING('Property','Value',...) creates a new CELLTRACKERSETTINGSTRACKING or raises the% existing singleton*. Starting from the left, property value pairs are% applied to the GUI before CellTrackerSettingsTracking_OpeningFcn gets called. An% unrecognized property name or invalid value makes property application% stop. All inputs are passed to CellTrackerSettingsTracking_OpeningFcn via varargin.%% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one% instance to run (singleton)".%% See also: GUIDE, GUIDATA, GUIHANDLES% Edit the above text to modify the response to help CellTrackerSettingsTracking% Last Modified by GUIDE v2.5 29-Jun-2015 10:46:15% Begin initialization code - DO NOT EDITgui_Singleton = 1;gui_State = struct('gui_Name', mfilename, ... 'gui_Singleton', gui_Singleton, ... 'gui_OpeningFcn', @CellTrackerSettingsTracking_OpeningFcn, ... 'gui_OutputFcn', @CellTrackerSettingsTracking_OutputFcn, ... 'gui_LayoutFcn', [] , ... 'gui_Callback', []);if nargin && ischar(varargin{1}) gui_State.gui_Callback = str2func(varargin{1});endif nargout [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});else gui_mainfcn(gui_State, varargin{:});end% End initialization code - DO NOT EDIT% --- Executes just before CellTrackerSettingsTracking is made visible.function CellTrackerSettingsTracking_OpeningFcn(hObject, eventdata, handles, varargin)% This function has no output args, see OutputFcn.% hObject handle to figure% eventdata reserved - to be defined in a future version of MATLAB% handles structure with handles and user data (see GUIDATA)% varargin command line arguments to CellTrackerSettingsTracking (see VARARGIN)global f_handlesf_handles.flagGUIclosedWithXrun = 1;% Choose default command line output for CellTrackerSettingsTrackinghandles.output = hObject;% Update handles structureguidata(hObject, handles);% UIWAIT makes CellTrackerSettingsTracking wait for user response (see UIRESUME)% uiwait(handles.figure1);%% set parameters to showtry7172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140
% Close the other windows
if ishandle(f_handles.h_GUIsetG); close(f_handles.h_GUIsetG); end;
if ishandle(f_handles.h_GUIsetS); close(f_handles.h_GUIsetS); end;
if ishandle(f_handles.h_GUIsetM); close(f_handles.h_GUIsetM); end;
if ishandle(f_handles.h_GUIstatistics); close(f_handles.h_GUIstatistics); end;
inpImage = imread(f_handles.PathImgOriginal, 1);
[rowI, colI, chI] = size(inpImage);
numImages = length(imfinfo(f_handles.PathImgOriginal));
% Check parameters
if f_handles.templateTreshold<1
f_handles.templateTreshold = 1;
end
if f_handles.tracking.mem<1 || f_handles.tracking.mem>numImages
f_handles.tracking.mem = ceil(numImages);
end
if f_handles.tracking.minlength<1 || f_handles.tracking.minlength>numImages
f_handles.tracking.minlength = ceil(numImages);
end
if f_handles.tracking.stepsize<0 || f_handles.tracking.stepsize>ceil(min([rowI, colI]))
f_handles.tracking.stepsize = ceil(min([rowI, colI]));
end
% Set parameters
set(handles.edit4, 'String', num2str(f_handles.templateTreshold));
set(handles.edit5, 'String', num2str(f_handles.tracking.mem));
set(handles.edit6, 'String', num2str(f_handles.tracking.minlength));
set(handles.edit7, 'String', num2str(f_handles.tracking.stepsize));
catch ME1
Message = {'Wrong parameter set.', ...
' '};
msgbox(Message,'Message')
end;
% --- Outputs from this function are returned to the command line.
function varargout = CellTrackerSettingsTracking_OutputFcn(hObject, eventdata, handles)
% varargout cell array for returning output args (see VARARGOUT);
% hObject handle to figure
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Get default command line output from handles structure
varargout{1} = handles.output;
% --- Executes during object deletion, before destroying properties.
function figure1_DeleteFcn(hObject, eventdata, handles)
% hObject handle to figure1 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% --- Executes when user attempts to close figure1.
function figure1_CloseRequestFcn(hObject, eventdata, handles)
% hObject handle to figure1 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hint: delete(hObject) closes the figure
global f_handles
if f_handles.flagGUIclosedWithXrun ~= 0;
f_handles.flagGUIclosedWithX = 1;
end
delete(hObject);
141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189190191192193194195196197198199200201202203204205206207208209210
% --- Executes on button press in pb_saveSettings.
function pb_saveSettings_Callback(hObject, eventdata, handles)
% hObject handle to pb_saveSettings (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
%% OK button to save settings
global f_handles
f_handles.flagGUIclosedWithXrun = 0;
try
% Errors check
inpImage = imread(f_handles.PathImgOriginal, 1);
[rowI, colI, chI] = size(inpImage);
numImages = length(imfinfo(f_handles.PathImgOriginal));
testTemplateTreshold = str2num(get(handles.edit4, 'String'));
testTrackingMem = str2num(get(handles.edit5, 'String'));
testMinlength = str2num(get(handles.edit6, 'String'));
testStepsize = str2num(get(handles.edit7, 'String'));
flag_ComputationOn = 1;
if testTemplateTreshold<1
flag_ComputationOn = 0;
end
if testTrackingMem<1 || testTrackingMem>numImages
flag_ComputationOn = 0;
end
if testMinlength<1 || testMinlength>numImages
flag_ComputationOn = 0;
end
if testStepsize<0 || testStepsize>min([rowI, colI])
flag_ComputationOn = 0;
end
if flag_ComputationOn == 1
f_handles.templateTreshold = str2num(get(handles.edit4, 'String'));
f_handles.tracking.mem = str2num(get(handles.edit5, 'String'));
f_handles.tracking.minlength = str2num(get(handles.edit6, 'String'));
f_handles.tracking.stepsize = str2num(get(handles.edit7, 'String'));
% Reset GUI
set(f_handles.h_FCpb04, 'BackgroundColor', 'yellow');
set(f_handles.h_FCpb05, 'BackgroundColor', 'yellow');
set(f_handles.h_FCpb06, 'BackgroundColor', 'yellow');
% Update visualization
if ishandle(f_handles.h_GUIsetT); close(f_handles.h_GUIsetT); end;
else
Message = {'Wrong parameter set.', ...
' '};
msgbox(Message,'Message')
end
catch ME1
Message = {'Wrong parameter set.', ...
' '};
msgbox(Message,'Message')
end
function edit1_Callback(hObject, eventdata, handles)
% hObject handle to edit1 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit1 as text
% str2double(get(hObject,'String')) returns contents of edit1 as a double
211212213214215216217218219220221222223224225226227228229230231232233234235236237238239240241242243244245246247248249250251252253254255256257258259260261262263264265266267268269270271272273274275276277278279280
% --- Executes during object creation, after setting all properties.
function edit1_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit1 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit3_Callback(hObject, eventdata, handles)
% hObject handle to edit3 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit3 as text
% str2double(get(hObject,'String')) returns contents of edit3 as a double
% --- Executes during object creation, after setting all properties.
function edit3_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit3 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit4_Callback(hObject, eventdata, handles)
% hObject handle to edit4 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit4 as text
% str2double(get(hObject,'String')) returns contents of edit4 as a double
% --- Executes during object creation, after setting all properties.
function edit4_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit4 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit5_Callback(hObject, eventdata, handles)
% hObject handle to edit5 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit5 as text
% str2double(get(hObject,'String')) returns contents of edit5 as a double
% --- Executes during object creation, after setting all properties.
function edit5_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit5 (see GCBO)
281282283284285286287288289290291292293294295296297298299300301302303304305306307308309310311312313314315316317318319320321322323324325326327328329330331332
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit6_Callback(hObject, eventdata, handles)
% hObject handle to edit6 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit6 as text
% str2double(get(hObject,'String')) returns contents of edit6 as a double
% --- Executes during object creation, after setting all properties.
function edit6_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit6 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit7_Callback(hObject, eventdata, handles)
% hObject handle to edit7 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit7 as text
% str2double(get(hObject,'String')) returns contents of edit7 as a double
% --- Executes during object creation, after setting all properties.
function edit7_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit7 (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end