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v1.4.3.62 DOC: minor revision of the NEWS file

parent 0270a457
dev 115-add-pcict-date-format-managment 118-plot-outputsmodel-remove-case-sensitivity-to-the-which-argument 136-decreased-performance-of-calibration-execution-time 60-migrate-transfoparam-functions-and-createcaliboptions-to-s3-methods 96-parallelize-the-grid-screening-step-during-calibration airGRplus cleanAirGRplus master CRAN_v1.7.0 CRAN_v1.6.12 CRAN_v1.6.11 CRAN_v1.6.10.4 CRAN_v1.6.9.27 CRAN_v1.6.9.24 CRAN_v1.6.9.23 CRAN_v1.6.9.21 CRAN_v1.4.3.65
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DESCRIPTION
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Package: airGR Package: airGR
Type: Package Type: Package
Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling Title: Suite of GR Hydrological Models for Precipitation-Runoff Modelling
Version: 1.4.3.61 Version: 1.4.3.62
Date: 2020-01-28 Date: 2020-01-28
Authors@R: c( Authors@R: c(
person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")), person("Laurent", "Coron", role = c("aut", "trl"), comment = c(ORCID = "0000-0002-1503-6204")),
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NEWS.md
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...@@ -2,11 +2,21 @@ ...@@ -2,11 +2,21 @@
### 1.4.3.61 Release Notes (2020-01-28)
#### Bug fixes
### 1.4.3.62 Release Notes (2020-02-07)
____________________________________________________________________________________
### 1.4.3.60 Release Notes (2020-01-29)
#### New features
- A digital object identifier (DOI) now allows to identify the manual of the airGR package. When you use airGR in your work, please always cite both the article and the manual. The last one allows to know the version of the package that is used in order to enhance reproducible research. The references can be displayed with the <code>citation("airGR")</code> command. - A digital object identifier (DOI) now allows to identify the manual of the airGR package. When you use airGR in your work, please always cite both the article and the manual. The last one allows to know the version of the package that is used in order to enhance reproducible research. The references can be displayed with the <code>citation("airGR")</code> command.
#### Bug fixes
- Fixed bug in <code>Imax()</code>. The default value of the <code>TestedValues</code> argument was wrong due to a mistyped argument name in the <code>seq()</code> function. - Fixed bug in <code>Imax()</code>. The default value of the <code>TestedValues</code> argument was wrong due to a mistyped argument name in the <code>seq()</code> function.
____________________________________________________________________________________ ____________________________________________________________________________________
...@@ -115,17 +125,6 @@ ________________________________________________________________________________ ...@@ -115,17 +125,6 @@ ________________________________________________________________________________
### 1.2.13.16 Release Notes (2019-04-03) ### 1.2.13.16 Release Notes (2019-04-03)
#### Deprecated and defunct
- The <code>Qobs</code> argument is now deprecated in <code>CreateInputsCrit()</code> and has been renamed <code>Obs</code>.
- The <code>FUN_CRIT</code> argument is now deprecated in <code>ErrorCrit()</code>. This function now gets this information from the <code>InputsCrit</code> argument.
- The <code>FUN_CRIT</code> argument is now deprecated in <code>Calibration_Michel()</code>. This function now gets this information from the <code>InputsCrit</code> argument.
- The <code>plot_OutputsModel()</code> had been deprecated in airGR 1.0.4 (it had been replaced by the use of <code>plot.OutputsModel()</code> or <code>plot()</code>) and is defunct now.
#### New features #### New features
- <code>CreateInputsCrit()</code> now presents a <code>VarObs</code> argument in order to allow to prepare an <code>InputsCrit</code> object in order to run a criterion on other variables than observed discharges with the <code>ErrorCrit()</code> function (at the moment SCA and SWE). - <code>CreateInputsCrit()</code> now presents a <code>VarObs</code> argument in order to allow to prepare an <code>InputsCrit</code> object in order to run a criterion on other variables than observed discharges with the <code>ErrorCrit()</code> function (at the moment SCA and SWE).
...@@ -151,6 +150,17 @@ ________________________________________________________________________________ ...@@ -151,6 +150,17 @@ ________________________________________________________________________________
- Added the cemaneige_hysteresis vignette to explain how to manage the use of the Linear Hysteresis with CemaNeige. - Added the cemaneige_hysteresis vignette to explain how to manage the use of the Linear Hysteresis with CemaNeige.
#### Deprecated and defunct
- The <code>Qobs</code> argument is now deprecated in <code>CreateInputsCrit()</code> and has been renamed <code>Obs</code>.
- The <code>FUN_CRIT</code> argument is now deprecated in <code>ErrorCrit()</code>. This function now gets this information from the <code>InputsCrit</code> argument.
- The <code>FUN_CRIT</code> argument is now deprecated in <code>Calibration_Michel()</code>. This function now gets this information from the <code>InputsCrit</code> argument.
- The <code>plot_OutputsModel()</code> had been deprecated in airGR 1.0.4 (it had been replaced by the use of <code>plot.OutputsModel()</code> or <code>plot()</code>) and is defunct now.
#### Major user-visible changes #### Major user-visible changes
- <code>CreateInputsCrit()</code> now return a list of <code>InputsCrit</code> (each element is of the <code>Single</code> class) in the cases of multiple or a composite criteria. - <code>CreateInputsCrit()</code> now return a list of <code>InputsCrit</code> (each element is of the <code>Single</code> class) in the cases of multiple or a composite criteria.
...@@ -223,6 +233,12 @@ ________________________________________________________________________________ ...@@ -223,6 +233,12 @@ ________________________________________________________________________________
### 1.0.14.1 Release Notes (2018-09-28) ### 1.0.14.1 Release Notes (2018-09-28)
#### New features
- <code>PEdaily_Oudin()</code> now presents a <code>LatUnit</code> argument which allows to choose the unit of the latitude (radians and degrees).
#### Deprecated and defunct #### Deprecated and defunct
- The <code>LatRad</code> argument is now deprecated in <code>PEdaily_Oudin()</code> and replaced by the <code>Lat</code> argument. - The <code>LatRad</code> argument is now deprecated in <code>PEdaily_Oudin()</code> and replaced by the <code>Lat</code> argument.
...@@ -230,10 +246,6 @@ ________________________________________________________________________________ ...@@ -230,10 +246,6 @@ ________________________________________________________________________________
- The unused <code>Ind_zeroes</code> argument of the <code>CreateInputsCrit()</code> function is now deprecated. - The unused <code>Ind_zeroes</code> argument of the <code>CreateInputsCrit()</code> function is now deprecated.
#### New features
- <code>PEdaily_Oudin()</code> now presents a <code>LatUnit</code> argument which allows to choose the unit of the latitude (radians and degrees).
#### Major user-visible changes #### Major user-visible changes
...@@ -306,6 +318,11 @@ ________________________________________________________________________________ ...@@ -306,6 +318,11 @@ ________________________________________________________________________________
- Three vignettes have been added. They are relative to different calibration methods (including the generalist parameters sets of the GR4J model). - Three vignettes have been added. They are relative to different calibration methods (including the generalist parameters sets of the GR4J model).
#### Deprecated and defunct
- The <code>RunSnowModule</code> argument is now deprecated in <code>CreateRunOptions()</code>.
#### Bug fixes #### Bug fixes
- Fixed bug in <code>RunModel_GR4H()</code>: in <code>frun_GR4H</code> Fortran subroutine, <code>St(2)</code> is now set to 0 (instead of <code>St(1)</code>) when <code>St(2) < 0</code>. - Fixed bug in <code>RunModel_GR4H()</code>: in <code>frun_GR4H</code> Fortran subroutine, <code>St(2)</code> is now set to 0 (instead of <code>St(1)</code>) when <code>St(2) < 0</code>.
...@@ -317,11 +334,6 @@ ________________________________________________________________________________ ...@@ -317,11 +334,6 @@ ________________________________________________________________________________
- Fixed bug in <code>plot.OutputsModel()</code> for the y-axis labelling of flows time series when <code>log_scale = TRUE</code> and <code>BasinArea</code> is used. - Fixed bug in <code>plot.OutputsModel()</code> for the y-axis labelling of flows time series when <code>log_scale = TRUE</code> and <code>BasinArea</code> is used.
#### Deprecated and defunct
- The <code>RunSnowModule</code> argument is now deprecated in <code>CreateRunOptions()</code>.
#### Major user-visible changes #### Major user-visible changes
- <code>RunModel_GR4J()</code>, <code>RunModel_GR5J()</code> and <code>RunModel_GR6J()</code> (and <code>CemaNeige_GR&#42;J()</code>) now return Ps, Pn and actual exchanges. See the model Fortran codes for more details about the calculation of these variables. - <code>RunModel_GR4J()</code>, <code>RunModel_GR5J()</code> and <code>RunModel_GR6J()</code> (and <code>CemaNeige_GR&#42;J()</code>) now return Ps, Pn and actual exchanges. See the model Fortran codes for more details about the calculation of these variables.
...@@ -426,21 +438,21 @@ ________________________________________________________________________________ ...@@ -426,21 +438,21 @@ ________________________________________________________________________________
- <code>plot_OutputsModel()</code> gains a <code>log_scale</code> argument in order to plot the flow with a log scale. - <code>plot_OutputsModel()</code> gains a <code>log_scale</code> argument in order to plot the flow with a log scale.
- A tutorial is available online on the following link: from http://webgr.irstea.fr/airGR. - A tutorial is available online on the following link: https://hydrogr.github.io/airGR/.
It can also be displayed with the <code>vignette("airGR")</code> command. It can also be displayed with the <code>vignette("airGR")</code> command.
#### Bug fixes
- The value <code>sort</code> for the <code>transfo</code> argument of <code>CreateInputsCrit()</code> was not taken into account. It is now fixed.
#### Deprecated and defunct #### Deprecated and defunct
- <code>CreateCalibOptions()</code> loses the OptimParam argument that was redundant with the <code>FixedParam</code> argument. The <code>Calibration_Michel()</code> was modified to take into account this change by using directly <code>FixedParam</code>, but this is transparent to the user. - <code>CreateCalibOptions()</code> loses the OptimParam argument that was redundant with the <code>FixedParam</code> argument. The <code>Calibration_Michel()</code> was modified to take into account this change by using directly <code>FixedParam</code>, but this is transparent to the user.
- <code>CreateCalibOptions()</code> loses the StartParam argument that was not used. - <code>CreateCalibOptions()</code> loses the StartParam argument that was not used.
#### Bug fixes
- The value <code>sort</code> for the <code>transfo</code> argument of <code>CreateInputsCrit()</code> was not taken into account. It is now fixed.
#### Major user-visible changes #### Major user-visible changes
...@@ -560,16 +572,16 @@ ________________________________________________________________________________ ...@@ -560,16 +572,16 @@ ________________________________________________________________________________
- New argument in many functions (<code>quiet = TRUE</code> or <code>FALSE</code>) to choose if the warnings should be suppressed or not. - New argument in many functions (<code>quiet = TRUE</code> or <code>FALSE</code>) to choose if the warnings should be suppressed or not.
#### Bug fixes #### Deprecated and defunct
- Fixed bug in <code>CreateCalibOptions()</code> to handle models with only one parameter. - The <code>CalibrationAlgo_&#42;()</code> functions were renamed into <code>Calibration_&#42;()</code>.
- Fixed bug in <code>Calibration_HBAN()</code>. The function was not working properly with models having only one parameter.
#### Bug fixes
#### Deprecated and defunct - Fixed bug in <code>CreateCalibOptions()</code> to handle models with only one parameter.
- The <code>CalibrationAlgo_&#42;()</code> functions were renamed into <code>Calibration_&#42;()</code>. - Fixed bug in <code>Calibration_HBAN()</code>. The function was not working properly with models having only one parameter.
#### Major user-visible changes #### Major user-visible changes
...@@ -616,6 +628,11 @@ ________________________________________________________________________________ ...@@ -616,6 +628,11 @@ ________________________________________________________________________________
This allows to provide real efficiency values in the outputs e.g. NSE[Q] instead of (-1) &times; NSE[Q]. This allows to provide real efficiency values in the outputs e.g. NSE[Q] instead of (-1) &times; NSE[Q].
#### Deprecated and defunct
- <code>EfficiencyCrit()</code> have been replaced by <code>ErrorCrit()</code> to avoid misunderstanding (by default, the algorithms minimise the error criterion).
#### Bug fixes #### Bug fixes
- RC11 bug correction: the automatic selection of the warm-up period was not working properly when no data was available from warm-up (i.e. when the user had set the run to start at the very first index). - RC11 bug correction: the automatic selection of the warm-up period was not working properly when no data was available from warm-up (i.e. when the user had set the run to start at the very first index).
...@@ -635,11 +652,6 @@ ________________________________________________________________________________ ...@@ -635,11 +652,6 @@ ________________________________________________________________________________
All basin data are now stored inside a list named <code>BasinData</code>. This will greatly ease the future use of Rdata files (instead of txt files) as storage format for the time series of observation. All basin data are now stored inside a list named <code>BasinData</code>. This will greatly ease the future use of Rdata files (instead of txt files) as storage format for the time series of observation.
#### Deprecated and defunct
- <code>EfficiencyCrit()</code> have been replaced by <code>ErrorCrit()</code> to avoid misunderstanding (by default, the algorithms minimise the error criterion).
#### Major user-visible changes #### Major user-visible changes
- The definition of the generic function is now made in a much simpler way (e.g. see <code>DefineFunctions_Model()</code> or <code>DefineFunctions_ErrorCrit()</code>). - The definition of the generic function is now made in a much simpler way (e.g. see <code>DefineFunctions_Model()</code> or <code>DefineFunctions_ErrorCrit()</code>).
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