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En prévision de l'arrivée de la forge institutionnelle INRAE, nous vous invitons à créer vos nouveaux projets sur la forge MIA.

  • Monnet Jean-Matthieu
  • lidaRtRee_tutorials
  • Wiki
  • Forest structure metrics mapping

Forest structure metrics mapping · Changes

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Create Forest structure metrics mapping authored 4 years ago by Monnet Jean-Matthieu's avatar Monnet Jean-Matthieu
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This `R` tutorial presents a workflow to compute both object-oriented and pixel-based metrics to describe the forest structure from Airborne Laser Scanning (lidar remote sensing) data. Extraction of different types of metrics is exemplified and code for parallelized processing of several ALS data files is provided.
The following files are provided:
* [Rmarkdown source](https://gitlab.irstea.fr/jean-matthieu.monnet/lidartree_tutorials/-/blob/master/gaps.edges.detection.Rmd),
* [**Forest gaps and edges detection tutorial in html**](https://gitlab.irstea.fr/jean-matthieu.monnet/lidartree_tutorials/-/raw/master/export/gaps.edges.detection.html?inline=false),
* [Forest gaps and edges detection tutorial in pdf](https://gitlab.irstea.fr/jean-matthieu.monnet/lidartree_tutorials/-/blob/master/export/gaps.edges.detection.pdf),
* a [bibliography file](https://gitlab.irstea.fr/jean-matthieu.monnet/lidartree_tutorials/-/blob/master/bib/bibliography.bib)
* datasets required to run the source code are also available on the repository.
Change log
* Jan 2021: updated to comply with lidR 3.1.0 and lidaRtRee 3.0.0
* Oct, 2020: checked compatibility with lidR 3.0.3
* May, 2020: added edge metrics, gaps computed using option `gapReconstruct=TRUE`, output resolution changed to 10 m for better consistency of tree metrics
* July, 2019: use of `doFuture` package instead of `doParallel` for parallelization; tested with lidR 2.1.0
* Feb, 2019: updated for compatibility with package lidR 2.0.0 and lidaRtRee 2.0.0
* July, 2018: initial version
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  • ABA data preparation
  • ABA mapping and inference
  • ABA model calibration
  • ALS data preprocessing
  • Area based approach
  • Field plot coregistration with ALS data
  • Forest gaps and edges detection
  • Forest structure metrics mapping
  • Tree segmentation
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